of H3 loop - Accelrys
of H3 loop - Accelrys
of H3 loop - Accelrys
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12<br />
Additional Fab Examples: Template based refinement<br />
• Modeling <strong>of</strong>: 2ajs.pdb<br />
• Modeling <strong>of</strong>: 2gcy.pdb<br />
• Modeling <strong>of</strong>: 2nyy.pdb<br />
CDR <strong>loop</strong> Loop length C-alpha RMSD BB-RMSD<br />
L1<br />
L2<br />
L3<br />
H1<br />
H2<br />
<strong>H3</strong><br />
12 1.36 1.40<br />
3 0.36 0.43<br />
6 0.81 1.24<br />
8 1.30 1.62<br />
5 2.16 2.00<br />
10 4.08 3.84<br />
CDR <strong>loop</strong> Loop length C-alpha RMSD BB-RMSD<br />
L1<br />
L2<br />
L3<br />
H1<br />
H2<br />
<strong>H3</strong><br />
11 1.00 1.03<br />
3 0.91 0.87<br />
6 1.04 1.33<br />
7 0.54 0.57<br />
6 0.57 0.53<br />
9 1.67 1.92<br />
CDR <strong>loop</strong> Loop length C-alpha RMSD BB-RMSD<br />
L1<br />
L2<br />
L3<br />
H1<br />
H2<br />
<strong>H3</strong><br />
11 0.93 0.94<br />
3 0.65 0.64<br />
6 0.57 0.63<br />
7 0.73 0.73<br />
6 0.84 0.82<br />
9 2.64 2.68
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