Curriculum vite - ITQB - Universidade Nova de Lisboa
Curriculum vite - ITQB - Universidade Nova de Lisboa
Curriculum vite - ITQB - Universidade Nova de Lisboa
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Carla Pinheiro_October 2012<br />
Carla Pinheiro<br />
<strong>Curriculum</strong> vitæ<br />
Annex 1 Oral presentations, posters and proceedings page 09<br />
Annex 2 Scientific referee for Journals in<strong>de</strong>xed at ISI page 12<br />
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Carla Pinheiro_October 2012<br />
Carla PINHEIRO<br />
Senior lab staff (Investigadora Auxiliar)<br />
Adjunct Professor FCT/UNL<br />
ResearcherID (WoK): A-4053-2008<br />
Scopus author ID: 54402224100<br />
www.itqb.unl.pt/~pinheiro/cv.html<br />
Date and place of Birth: 18.12.971, Huambo (Angola)<br />
Nationality: Portuguese<br />
<strong>ITQB</strong>, Av. da República - EAN, 2780-157 Oeiras (Portugal)<br />
Telefone: +351214469656<br />
Email: pinheiro@itqb.unl.pt<br />
Aca<strong>de</strong>mic Qualifications<br />
2004. Biology PhD (Instituto <strong>de</strong> Tecnologia Química e Biológica/<strong>Universida<strong>de</strong></strong> <strong>Nova</strong> <strong>de</strong><br />
<strong>Lisboa</strong>)<br />
1998. Master of Science in Plant Physiology and Biochemistry (<strong>Universida<strong>de</strong></strong> <strong>de</strong> <strong>Lisboa</strong> and<br />
<strong>Universida<strong>de</strong></strong> Técnica <strong>de</strong> <strong>Lisboa</strong>)<br />
1994. Degree in Biology-Plant Biology (<strong>Universida<strong>de</strong></strong> <strong>de</strong> <strong>Lisboa</strong>). Classification: 16/20<br />
Areas of Expertise<br />
Plant Physiology and Biochemistry (mechanisms of response and adaptation to<br />
environmental constraints);<br />
Photosynthesis, plant performance, plant productivity and crop yield;<br />
Carbohydrate metabolism;<br />
Seed <strong>de</strong>velopment (legumes);<br />
Proteomics.<br />
Research Area of Interest<br />
Abiotic stress research making use of complementary approaches (plant physiology,<br />
biochemistry and proteomics);<br />
Photosynthetic performance and plant productivity;<br />
Source-sink relations (carbon metabolism);<br />
Seed <strong>de</strong>velopment and nutritional quality;<br />
National germplasm characterization.<br />
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Carla Pinheiro_October 2012<br />
Publications<br />
h-in<strong>de</strong>x 11 (> 660 citations at ISI-Web of Knowledge);<br />
21 articles refereed at ISI-Web of Knowledge;<br />
1. Zarrouk O., Francisco R., Pintó-Marijuan M., Brossa R., Santos R.R., Pinheiro C., Costa<br />
M., Lopes C., Chaves M. 2012. "Impact of irrigation regime on berry <strong>de</strong>velopment and<br />
flavonoids composition in Aragonez (Syn. Tempranillo) grapevine". Agricultural Water<br />
Management 114, 18-29. doi: 10.1016/j.agwat.2012.06.018<br />
2. Pinheiro C., António C., Ortuño M.F., Dobrev P.I, Hartung W., Thomas-Oates J.,<br />
Ricardo C.P., Vanková R., Chaves M.M., Wilson J.C. 2011. "Initial water <strong>de</strong>ficit effects on<br />
Lupinus albus photosynthetic performance, carbon metabolism and hormonal balance:<br />
metabolic reorganisation prior to early stress responses". Journal of Experimental<br />
Botany 62, 4965-4974. doi:10.1093/jxb/err194<br />
3. Alves M., Moes S., Jenö P., Pinheiro C., Passarinho J., Ricardo C.P. 2011. “The analysis<br />
of Lupinus albus root proteome revealed cytoskeleton altered features due to longterm<br />
boron <strong>de</strong>ficiency”. Journal of Proteomics 74, 1351-1363. doi:<br />
10.1016/j.jprot.2011.03.002<br />
4. Alves M., Chicau P., Matias H., Passarinho J., Pinheiro C., Ricardo C.P. 2011. “Metabolic<br />
analysis revealed altered amino acid profiles in Lupinus albus organs due to boron<br />
<strong>de</strong>ficiency“. Physiologia Plantarum 142, 224-232. doi: 10.1111/j.1399-<br />
3054.2011.01462.x<br />
5. Ricardo C.P.P., Martins I., Francisco R., Sergeant K., Pinheiro C., Campos A., Renaut J.<br />
and Fevereiro P. 2011. "Proteins associated with cork formation in Quercus suber L.<br />
stem tissues". Journal of Proteomics 74, 1266-1278. doi:10.1016/j.jprot.2011.02.003<br />
6. Pinheiro C. and Chaves M.M. 2011. “Photosynthesis and drought - can we make<br />
metabolic connections from available data?” Journal of Experimental Botany 62, 869-<br />
882. doi:10.1093/jxb/erq340. HIGHLY CITED PAPER in the PLANT & ANIMAL SCIENCE<br />
field<br />
7. Felisberto-Rodrigues C., Ribeiro I.C., Veloso M., Ricardo C.P. and Pinheiro C. 2010.<br />
“Germination un<strong>de</strong>r aseptic conditions of different ecotypes of wild beet (Beta vulgaris<br />
L. ssp maritima)”. Seed Science and Technology 38, 517-521.<br />
8. Pinheiro C., Baeta J.P., Pereira A.M., Domingues H. and Ricardo C.P. 2010. “Diversity of<br />
seed mineral content in Phaseolus vulgaris L. germplasm”. Journal of Food<br />
Composition and Analysis 23, 319–325. doi:10.1016/j.jfca.2010.01.005<br />
9. Sergeant* K., Pinheiro* C., Hausman J.-F., Ricardo C.P. and Renaut J. 2009. "Taking<br />
advantage of non-specific trypsin cleavages for the i<strong>de</strong>ntification of seed storage<br />
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Carla Pinheiro_October 2012<br />
proteins in cereals". Journal of Proteome Research 8, 3182-3190. doi:<br />
10.1021/pr801093f (* equal contribution)<br />
10. Chaves* I., Pinheiro* C., Paiva J., Planchon S., Sergeant K., Renaut J., Graça J.A., Costa<br />
G., Coelho A.V. and Ricardo C.P.P. 2009. "Proteomic evaluation of wound-healing<br />
processes in potato (Solanum tuberosum L.) tuber tissue”. Proteomics 9, 4154–4175.<br />
doi: 10.1002/pmic.200700649 (* equal contribution)<br />
11. Chaves M.M., Flexas J. and Pinheiro C. 2009. "Photosynthesis un<strong>de</strong>r drought and salt<br />
stress - regulation mechanisms from whole plant to cell". Annals of Botany 103, 551–<br />
560. doi:10.1093/aob/mcn125. HIGHLY CITED PAPER in the PLANT & ANIMAL SCIENCE<br />
field; top 1% within its field according to Essential Science Indicators<br />
12. Antonio C., Pinheiro C., Chaves M.M., Ricardo C.P, Ortuno M.F. and Thomas-Oates J.<br />
2008. “Analysis of carbohydrates by porous graphitic carbon liquid chromatography<br />
electrospray ionization mass spectrometry in Lupinus albus stem during the imposition<br />
of water <strong>de</strong>ficit”. Journal of Chromatography A 1187, 111-118. doi:<br />
10.1016/j.chroma.2008.02.010.<br />
13. Pinheiro* C., Cruz <strong>de</strong> Carvalho* M.H., Bartels D., Ricardo C.P. and Chaves M.M. 2008.<br />
“Dehydrins in Lupinus albus: pattern of protein accumulation and gene expression in<br />
response to drought”. Functional Plant Biology 35, 85–91. doi: 10.1071/FP07179 (*<br />
equal contribution)<br />
14. Pinheiro C., Rodrigues A.P., Saraiva <strong>de</strong> Carvalho I., Chaves M.M. and Ricardo C.P. 2005<br />
“Sugar metabolism in <strong>de</strong>veloping lupin seeds affected by a short-term water <strong>de</strong>ficit”.<br />
Journal of Experimental Botany 56, 2705-2712. doi: 10.1093/jxb/eri263<br />
15. Pinheiro C., Kehr J. and Ricardo C.P. 2005 “Effect of water stress on lupin stem protein<br />
analysed by two-dimensional gel electrophoresis”. Planta 221, 716-728. doi:<br />
10.1007/s00425-004-1478-0<br />
16. Pinheiro C., Passarinho J.A. and Ricardo C.P. 2004 "Effect of drought and rewatering<br />
on the metabolism of L. albus organs". Journal of Plant Physiology 161, 1203-1210.<br />
doi: 10.1016/j.jplph.2004.01.016<br />
17. Vaz A.C., Pinheiro C., Martins J.M.N. and Ricardo C.P.P. 2004 “Cultivar discrimination<br />
of Portuguese Lupinus albus by seed protein electrophoresis: the importance of<br />
consi<strong>de</strong>ring "glutelins" and glycoproteins”. Field Crops Research 87, 23-34. doi:<br />
10.1016/j.fcr.2003.09.006<br />
18. Price N.J., Pinheiro C., Soares C.M., Ashford D., Ricardo C.P.P. and Jackson P. 2003. “A<br />
biochemical and molecular characterisation of LEP1, an extensin peroxidase from<br />
lupin”. Journal of Biological Chemistry 278, 41389-41399. doi:<br />
10.1074/jbc.M304519200<br />
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Carla Pinheiro_October 2012<br />
19. Chaves M.M., Pereira J.S., Maroco J., Rodrigues M.L., Ricardo C.P.P., Osório M.L.,<br />
Carvalho I., Faria T. and Pinheiro C. 2002. “How plants cope with water stress in the<br />
field. Photosynthesis and growth”. Annals of Botany 89, 907-16. doi:<br />
10.1093/aob/mcf105. HIGHLY CITED PAPER in the PLANT & ANIMAL SCIENCE field; top<br />
1% within its field according to Essential Science Indicators<br />
20. Pinheiro C., Chaves M.M. and Ricardo C.P. 2001. “Alterations in carbon and nitrogen<br />
metabolism induced by water <strong>de</strong>ficit in stem and leaves of Lupinus albus (L.)”. Journal<br />
of Experimental Botany 52, 1063-70.<br />
21. Regalado A., Pinheiro C., Vidal S., Chaves I., Ricardo C.P. and Rodrigues-Pousada C.<br />
2000. “The Lupinus albus class III chitinase gene is constitutively expressed in<br />
vegetative organs and <strong>de</strong>veloping seeds”. Planta 210, 543-50.<br />
non peer reviewed Publications<br />
1. Fernan<strong>de</strong>s M.M., Coiteiro P.F., Morgado J.A., Pinheiro C. and Duarte P.F. 1999/2000.<br />
"Etnobotânica Transmontana – O aproveitamento da flora silvestre no <strong>de</strong>senvolvimento<br />
rural." Gil Vicente, 1, 64-79 (ISSN: 0016-9943).<br />
Thesis<br />
2004. “Plant responses to water <strong>de</strong>ficit”. PhD Thesis in Biology. <strong>ITQB</strong>/UNL.<br />
1988. “Metabolismo da sacarose e purificação <strong>de</strong> uma invertase neutral em sementes <strong>de</strong><br />
Lupinus albus (L.)”. MSc Thesis. FCUL and ISA/UTL.<br />
1994. “Compartmentation studies in Sorghum bicolor [L.] Moench (cv NK 405): Sugars and<br />
sucrose metabolizing enzymes in stem parenchyma cells”. Universität zu Köln and<br />
FCUL.<br />
In<strong>vite</strong>d communications<br />
2012. Pinheiro C., Ribeiro I.C., Dodd I.C., António C., Mariott A., Pintó-Marijuan M.,<br />
Rodrigues M.A.A., Machado A., Bicho C., Ortuño M.F., Ricardo, C.P., Chaves M.M.,<br />
Wilson J.C., Thomas-Oates J."Water <strong>de</strong>ficit and plant performance: time scales of<br />
metabolic and physiological responses". XI Simposio Hispano-Portugués <strong>de</strong><br />
Relaciones Hídricas en las Plantas, Sevilla, Spain.<br />
2011. Pinheiro C., Sergeant K., Machado C., Renaut J. and Pinto Ricardo C.P. "Maize seed<br />
proteome: combining 19 th century biochemistry with 21 st century tools." The 2 nd<br />
International Congress on Analytical Proteomics, Ourense, Spain.<br />
2009. Pinheiro C., António C., Ortuño M.F., Thomas-Oates J., Ricardo C.P., Vankova R.,<br />
Hartung W., Chaves M.M. “Water <strong>de</strong>ficit: when, how and where are alterations<br />
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Carla Pinheiro_October 2012<br />
perceived?” XVIII Reunión <strong>de</strong> la Sociedad Española <strong>de</strong> Fisiología Vegetal (SEFV) & XI<br />
Congreso Hispano-Luso <strong>de</strong> Fisiología Vegetal, Zaragoza, Spain.<br />
2009. Pinheiro C. "Proteomics approach to water <strong>de</strong>ficit: lessons from a legume". COST<br />
Dynamic Training School - Forest and water stress in a changing environment: from<br />
cell to ecosystems", Orvieto, Italy.<br />
2009. Pinheiro C. "Suberization proteomics - from the tree to the mo<strong>de</strong>l". COST Dynamic<br />
Training School - Forest and water stress in a changing environment: from cell to<br />
ecosystems", Orvieto, Italy.<br />
Oral presentations, posters and proceedings (see Annex 1)<br />
Grants and Projects<br />
starting 2013. "INNOVINE - Combining innovation in vineyard management and genetic<br />
diversity for a sustainable European viticulture". KBBE-2012-6-311775. Project<br />
Coordinator: Anne-Françoise Adam-Blondon (URGV-Plant Genomics Research).<br />
2012-present. "Converting C3 to C4 photosynthesis for sustainable agriculture - 3to4".<br />
KBBE-2011-289582. Project coordinator: Professor Richard C. Leegood<br />
(Department of Animal and Plant Sciences of the University of Sheffield). 3to4.org<br />
2011-present. "Phosphoproteomics of soybean seeds matured at Chernobyl". Scientific<br />
Cooperation Agreement between Portugal and Slovakia. Slovakia partner - Institute<br />
of Plant Genetics and Biotechnology, Slovak Aca<strong>de</strong>my of Sciences (Martin Hajduch).<br />
2011-present. "Search for candidate protein biomarkers of Coffea arabica resistance to<br />
Hemileia vastatrix (leaf rust)". (PTDC/AGR-GPL/109990/2009). Project coordinator:<br />
Leonor Guimarães (IICT).<br />
2010-present: "IMPROVIRON: IMproved PROductiVity and IRON nutrition in legume grains”<br />
(PTDC/AGR-GPL/102861/2008). Project coordinator: Marta Vasconcelos (UCP).<br />
2010-present. "Genetic analysis of suber differentiation in Quercus suber L." (PTDC/AGR-<br />
AAM/100465/2008). Project coordinator: Rita Teixeira (ISA/UTL).<br />
2008-present. “Sustainable water use securing food production in dry areas of the<br />
Mediterranean region - SWUP-MED” (KBBE-2008-212337). Project coordinator: Dr.<br />
Sven-Erik Jacobsen (Department of Agricultural Sciences of the University of<br />
Copenhagen).<br />
2007-2010. "The wild relatives of Beta: genetic diversity assessment and biochemical<br />
studies" (PTDC/AGR-AAM/73144/2006). Project coordinator: Maria Cristina Reis <strong>de</strong><br />
Lima Duarte (IICT).<br />
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Carla Pinheiro_October 2012<br />
2007-2011. Participation in the COST action FA0603 "Plant Proteomics in Europe - EUPP".<br />
Principal contractor: Dr. Jenny Renaut (Centre <strong>de</strong> Reserche Public Gabriel Lippmann,<br />
Luxembourg).<br />
2008-2009. “Screening for stress responsive metabolites, B-18/08" Treaty of Windsor,<br />
Anglo-Portuguese Joint Research Programme. UK partner - Department of<br />
Chemistry of the University of York (Jane Thomas-Oates and Carla António).<br />
2005-2009. “Maize “broa” quality attributes: I<strong>de</strong>ntifying genes that affect the<br />
technological ability for bread production” (POCTI/AGR/57994/2004). Project<br />
coordinator: Carlota Vaz Patto (<strong>ITQB</strong>).<br />
Stu<strong>de</strong>nt Supervision<br />
2011-to date. Supervision of 1 PhD stu<strong>de</strong>nt; Co-Supervision of 1 PhD stu<strong>de</strong>nt;<br />
2005-to date. Supervision of 18 stu<strong>de</strong>nts in activities related with research projects (BI),<br />
short term trainees (PhD stu<strong>de</strong>nts and 1 PosDoc) and internships (Degree completion)<br />
PhD Supervision & Co-Supervision<br />
Isa Ribeiro (SFRH/BD/70345/2010) "Impact of soil water availability on chickpea seed<br />
production and food protein allergenicity". April 2011 - to date.<br />
Amelia Díaz Mén<strong>de</strong>z "Calidad postcosecha <strong>de</strong> la fruta <strong>de</strong> hueso mediante aproximaciones<br />
molceulares (Proteómicas & Transcriptómicas)". April 2012 - to date. Supervisor<br />
Esther Giraldo Ramos (INTAEX).<br />
Stu<strong>de</strong>nt supervision (fun<strong>de</strong>d projects)<br />
March 2011 to present – “Root proteomic analysis of Fe <strong>de</strong>ficiency in legume plants”<br />
performed un<strong>de</strong>r the project "IMPROVIRON: IMproved PROductiVity and IRON<br />
nutrition in legume grains” (PTDC/AGR-GPL/102861/2008). Stu<strong>de</strong>nt - Jaqueline<br />
Garcia.<br />
2010 to present - "Q. suber cork cambium proteins" <strong>de</strong>veloped for the project "Genetic<br />
analysis of suber differentiation in Quercus suber L." (PTDC/AGR-<br />
AAM/100465/2008). September to November 2010 - João Bento; starting March<br />
2011 - A<strong>de</strong>lai<strong>de</strong> Machado.<br />
2008 to 2010 – “Stress metabolites from wild Beta relatives” <strong>de</strong>veloped for the project<br />
"The wild relatives of Beta: genetic diversity assessment and biochemical studies"<br />
(PTDC/AGR-AAM/73144/2006). January to July 2008 - Catarina Rodrigues; March<br />
2009 to October 2010 - Isa Ribeiro.<br />
March to August 2007 – “Maize “broa” quality attributes: I<strong>de</strong>ntifying genes that affect the<br />
technological ability for bread production” (POCTI/AGR/57994/2004). Stu<strong>de</strong>nt:<br />
Cátia Machado.<br />
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Short term trainees (PhD stu<strong>de</strong>nts)<br />
Daša Gábrišová (August-September 2012) - "Phosphoproteomics of soybean seeds<br />
matured at Chernobyl". Supervisor: Martin Hajduch (Institute of Plant Genetics and<br />
Biotechnology, Slovak Aca<strong>de</strong>my of Sciences).<br />
Michal Bercak (May 2012) - "Phosphoproteomics of soybean seeds matured at Chernobyl".<br />
Supervisor: Martin Hajduch (Institute of Plant Genetics and Biotechnology, Slovak<br />
Aca<strong>de</strong>my of Sciences).<br />
Asma JDey (November 2011- January 2012) - "Effect of water <strong>de</strong>ficit on the physiological,<br />
biochemical and molecular behavior of different provenance of Cakile maritima".<br />
Supervisors: Chedly Ab<strong>de</strong>lly (Biotechnology Center of Borj Cedria).<br />
Maria Filipa Queirós (April-October 2009) - "Salt tolerance in Solanum tuberosum L. cell<br />
lines - Biochemistry, Proteomics and ultrastructure". Supervisors: Fernanda Fidalgo<br />
& Domingos Almeida (FCUP).<br />
Internships<br />
February to July 2012 - Mariana Amaral da Costa co-supervision with Isabel Bento (<strong>ITQB</strong>)<br />
on the work "Pathogen related proteins of family 10: biochemical and structural<br />
characterization in legumes". Graduation Thesis in Biology, ISA-UTL.<br />
February to July 2012 - Nídia Almeida co-supervision with Isabel Bento (<strong>ITQB</strong>) on the work<br />
"Differential solubilization of proteins and their characterizatio (electrophoretic and<br />
crystallographic)". Graduation Thesis in Biochemistry, FCT-UNL.<br />
February to June 2011 - Diana Araújo co-supervision with Isabel Bento (<strong>ITQB</strong>) on the work<br />
"Biochemical and structural characterization of pathogen related proteins of family<br />
10". Graduation Thesis in Biochemistry, FCT-UNL.<br />
January to February 2011 - Elena Jimenez supervision on the work "Lupin seed reserves in<br />
relation to genotype and growing conditions" performed un<strong>de</strong>r the project<br />
“Sustainable water use securing food production in dry areas of the Mediterranean<br />
region - SWUP-MED" (KBBE-2008-212337).<br />
June to August 2009 - Annie Storther supervision (fellowship of the Institute of European<br />
Studies at UC Berkeley) on the work “Arabidopsis and Thellungiella responses to<br />
water <strong>de</strong>ficit – a physiological approach”.<br />
September 2007 to June 2008 – “Cysteine protease family in Arabidopsis and<br />
Thellungiella– a PCR approach” <strong>de</strong>veloped by Sheylla Borges. Co-supervision with<br />
Nelson Saibo.<br />
March to August 2005 – “Lupinus albus protease inhibitors” <strong>de</strong>veloped by Ana Sousa<br />
Pereira to be presented to the discipline “Estágio II”, 4 th year of Química Aplicada –<br />
Ramo Biotecnologia (<strong>Universida<strong>de</strong></strong> <strong>Nova</strong> <strong>de</strong> <strong>Lisboa</strong>).<br />
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Carla Pinheiro_October 2012<br />
Teaching activities<br />
2012- to date. Adjunct Professor at FCT/UNL (Departamento <strong>de</strong> Ciências da Vida); Plant<br />
Biology regent – lectures and practical classes for Cellular and Molecular Biology<br />
<strong>de</strong>gree (1 st cycle), the Biochemistry <strong>de</strong>gree (1 st cycle) and the Post-graduation in<br />
Biology and Geology);<br />
2009-to date. <strong>ITQB</strong> PhD program (tutorials in the curricular units: Trends in Microbiology<br />
and Cell Biology; Frontiers of Biotechnology);<br />
2009. Cost Dynamic Training School - Forest and water stress in a changing environment:<br />
from cell to ecosystems. Sponsored by the COST actions FP 0601 (FORMAN - Forest<br />
Management and the Water Cycle) and FA 0603 (PPE - Plant Proteomics in Europe).<br />
Orvieto, Italy;<br />
2008-11. In<strong>vite</strong>d lecturer of “Plant Functional Genomics” at ISA/UTL (6 ECTS), Functional<br />
Biology Master <strong>de</strong>gree (coordinator Glória Esquível).<br />
Training-courses organization<br />
2011. "Differential gel electrophoresis (ETTAN TM 2D-DIGE) - Check it with your own<br />
samples". GE Healthcare training workshop, <strong>ITQB</strong>, Portugal<br />
2010. "Advanced hands-on training in Refraction-2D (multiplex-fluorescence 2D gel<br />
electrophoresis) analysis" NHD workshop, <strong>ITQB</strong>, Portugal<br />
2009. "Gel image analysis" Progenesis SameSpots hands-on training, <strong>ITQB</strong>, Portugal<br />
Scientific referee<br />
Principal examiner for 3 PhD Thesis;<br />
Grant evaluator (BARD-The US-Israel Agricultural Research & Development Fund);<br />
Journal of Integrated -OMICS Associated Editor;<br />
Reviewer for several scientific journals in<strong>de</strong>xed at ISI-Web of Knowledge and ranked<br />
in the 1 st quartile (Q1) of their categories, e.g. Plant Sciences, Biochemical Research<br />
Methods, Food Science and Technology (see Annex 2 for complete list);<br />
Other Scientific activities<br />
Member of the Organizing Committee of the “XIII Congresso Luso-Espanhol <strong>de</strong><br />
Fisiologia Vegetal” (scheduled for July 2013)<br />
Member of the "Socieda<strong>de</strong> Portuguesa <strong>de</strong> Fisiologia Vegetal" and of the "Socieda<strong>de</strong><br />
Portuguesa <strong>de</strong> Bioquímica"<br />
Member of the Society for Experimental Biology<br />
Member of the European Plant Science Organisation (EPSO) and of the European<br />
Technology Platform Plants for the Future<br />
International Plant Proteomics Organization (INPPO) - Country Representative<br />
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Carla Pinheiro_October 2012<br />
Annex 1 - Oral presentations, posters and proceedings (2008-2012)<br />
Oral presentations<br />
2012. Ribeiro, I.C., Pinheiro, C., Ribeiro, C., Veloso, M., Paulo, O., Ricardo, C.P. "Portuguese wild<br />
beet ecotypes (Beta vulgaris ssp. maritima): physiological performance un<strong>de</strong>r drought and<br />
salinity and genetic affinities". XI Simposio Hispano-Portugués <strong>de</strong> Relaciones Hídricas en las<br />
Plantas, Sevilla, Spain. (oral presentation; presenting author un<strong>de</strong>rlined).<br />
2012. Zarrouk, O., Francisco, R., Pintó-Marijuan, M., Brossa, R., Santos, R.R., Pinheiro, C., Costa,<br />
J.M., Lopes, C., Chaves, M.M. "Impact of irrigation regime on berry <strong>de</strong>velopment and flavonoids<br />
composition in Aragonez (Syn. Tempranillo) grapevine". XI Simposio Hispano-Portugués <strong>de</strong><br />
Relaciones Hídricas en las Plantas, Sevilla, Spain. (oral presentation; presenting author<br />
un<strong>de</strong>rlined).<br />
2012. Pinheiro, C., Simões, N., Costa, M., Toureiro, A., Ribeiro, I.C., Lourenço, M.E., Silva, L.L.,<br />
Duarte, M.I. and Chaves, M.M. "Leaf temperature and photosynthetic performance in chickpea".<br />
"Ecophysiology Techniques Workshop", Plant Enviroment Physiology Group (SEBiology.org),<br />
<strong>Lisboa</strong>, Portugal. (flash talk; presenting author un<strong>de</strong>rlined).<br />
2011. Guerra-Guimarães, L., Chaves, I., Vieira, A., Pinheiro, C., Calmeiro, T., Renaut, J., Pereira, A.,<br />
Loureiro, A., Zambolim, L., Ricardo, C.P. and Silva, M.C. "Cellular and proteomic analysis<br />
of Coffea arabica leaves healthy and infected with Hemileia vastatrix." 44º Congresso Brasileiro<br />
<strong>de</strong> Fitopatologia, Bento Gonçalves, Brazil. Tropical Plant Pathology, 36 (supplement), pp946.<br />
(oral presentation; presenting author un<strong>de</strong>rlined).<br />
2011. Ribeiro, I.C., Chaves, M.M., Freire, J.P. and Pinheiro, C. "Genotype influence on chickpea seed<br />
protein digestibility and allergenicity." The 2 nd International Congress on Analytical Proteomics,<br />
Ourense, Spain. (oral presentation; presenting author un<strong>de</strong>rlined).<br />
2011. Pinheiro, C., Batista, R., Ribeiro I., Sergeant, K., Renaut, J. and Pinto Ricardo, C.P. "Seed<br />
Proteomics: How COST FA603 ma<strong>de</strong> a difference". Plant Proteomics in Europe: where do we<br />
stand and where are we heading to?. Final COST FA0603 meeting, Dijon, France. (oral<br />
presentation; presenting author un<strong>de</strong>rlined).<br />
2011. Ribeiro, I.C., Reisinger, V., Ricardo, C.P., Pinheiro, C. and Eichacker, L. "Application of the Blue<br />
Native DIGE methodology to the study of the membrane proteome of a beet wild relative in<br />
response to salt stress". Plant Proteomics in Europe: where do we stand and where are we<br />
heading to?. Final COST FA0603 meeting, Dijon, France. (oral presentation; presenting author<br />
un<strong>de</strong>rlined).<br />
2010. Pinheiro, C., Sergeant, K., Machado, C., Hausman, J.F., Renaut, J. and Ricardo, C.P. "Maize<br />
storage proteins: can they be used for germplasm discrimination?" System biology and Omic<br />
approaches. Joint meeting of the Groupe <strong>de</strong> Contact FNRS Protéomique & COST action: Plant<br />
proteomics in Europe. Namur, Belgium. (oral presentation; presenting author un<strong>de</strong>rlined).<br />
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Carla Pinheiro_October 2012<br />
2009. Pinheiro, C. and Ricardo, C.P. "Uso racional da água na manutenção da paisagem urbana".<br />
Workshop Utilização Racional da Água - SMAS Sintra, Portugal. (oral presentation; presenting<br />
author un<strong>de</strong>rlined).<br />
2009. Chaves, M.M. and Pinheiro, C. “Photosynthesis and carbon metabolism un<strong>de</strong>r drought – early<br />
warnings and ultimate constraints”. InterDrought III, Shanghai, China. (oral presentation;<br />
presenting author un<strong>de</strong>rlined).<br />
2008. Chaves, M.M. and Pinheiro, C. "Effects of drought stress on photosynthesis and sugar<br />
metabolism". Plant energy and water productivity: from genes to environment (ComBio Satellite<br />
Conference), Camberra, Australia. (oral presentation; presenting author un<strong>de</strong>rlined).<br />
Communications with Proceedings<br />
2012. Guerra-Guimarães, L., Vieira, A., Chaves, I., Queiroz V., Pinheiro, C., Renaut, J., Silva, L.,<br />
Zambolim, L., Ricardo, C. and Silva, M.C. "Integrated cytologic and proteomic analysis<br />
of Coffea arabica - Hemileia vastatrix interactions". Proceedings of the 24 th ASIC International<br />
Conference on Coffe Science, Costa Rica.<br />
2010. Rodrigues, M.A.A., Pinheiro, C., Oliveira, M.M. and Abreu I.A. "Methodology for optimization<br />
of 2D analysis of plant SUMOylation". The 4 th EuPA & 6 th ProCura Meeting, Estoril, Portugal.<br />
2010. Ribeiro, I., Reisinger, V., Ricardo, C.P., Pinheiro, C. and Eichacker, L. "Leaf membrane<br />
proteome un<strong>de</strong>r salinity: application of the blue native DIGE methodology". The 4 th EuPA &<br />
6 th ProCura Meeting, Estoril, Portugal.<br />
2010. Pinheiro, C., Sergeant, K., Vaz Patto, C., Brites, C., Machado, C., Renaut, J. and Ricardo, C.P.<br />
"Seed protein polymorphism: maize germplasm discrimination and bread-making ability".<br />
The 4 th EuPA & 6 th ProCura Meeting, Estoril, Portugal.<br />
2010. Batista, R., Pinheiro, C., Ricardo, C.P., Jëno, P. and Oliveira, M.M. "Maize-induced allergy:<br />
each planta different reaction?" The 4 th EuPA & 6 th ProCura Meeting, Estoril, Portugal.<br />
Posters<br />
2012. Ribeiro, I.C., Simões, N., Duarte, I., Almeida, N., Chaves, M.M. and Pinheiro, C. "Prefractionation<br />
methods for the analysis of low abundance legume seed proteins". Conference<br />
on Integrative Biology in Plants, Microorganisms and the Environment (SysBioLux),<br />
Luxembourg.<br />
2012. Queiroz, V., Vieira, A., Silva, L., Chaves, I., Pinheiro, C., Renaut, J., Almeida, M.H., Silva,<br />
M.C., Zambolim, L., Ricardo, C. and Guerra-Guimarães, L. "An exploratory ,method for the<br />
study of membrane proteins of Coffea arabicaleaves". Conference on Integrative Biology in<br />
Plants, Microorganisms and the Environment (SysBioLux), Luxembourg.<br />
2012. Ribeiro, I.C., Simões, N., Planchon, S., Duarte, I., Freire, J.B., Chaves, M.M., Renaut, J.<br />
and Pinheiro, C. "Chickpea seed digestibility and antinutritional content". The 3 rd <strong>ITQB</strong> PhD<br />
Stu<strong>de</strong>nts Meeting, Oeiras, Portugal.<br />
10/12
Carla Pinheiro_October 2012<br />
2012. Costa, J.M., Simões, N., Toureiro, A., Duarte, I., Pinheiro, C., Chaves. M.M. "Characterization<br />
of chickpea (Cicer arietinum) accessions in the field - leaf gas-exchange and temperature. XI<br />
Simposio Hispano-Portugués <strong>de</strong> Relaciones Hídricas en las Plantas, Sevilla, Spain.<br />
2011. Ribeiro, I.C., Freire, J.P., Simões, N., Duarte, I., Chaves, M.M. and Pinheiro, C. "Chickpea<br />
seed production, seed quality and digestibility – genotype and environmental effects." XIX<br />
Reunión <strong>de</strong> la Sociedad Española <strong>de</strong> Fisiología Vegetal (SEFV) & XII Congreso Hispano-Luso <strong>de</strong><br />
Fisiología Vegetal, Castelló <strong>de</strong> la Plana, Spain.<br />
2011. Bento, J., Machado, A., Teixeira, R, Ricardo, C.P. and Pinheiro, C. "Relating Quercus<br />
suber cork quality with the cork proteome". Plant Proteomics in Europe: where do we stand<br />
and where are we heading to?. Final COST FA0603 meeting, Dijon, France.<br />
2010. Rodrigues, M.A.A., Pinheiro, C., Oliveira, M.M. and Abreu I.A. "Analysis of plant SUMOylation<br />
by gel based Proteomics". ProteomLux 2010, Luxembourg.<br />
2010. Rodrigues, M.A.A., Almeida., D, Figueiredo, D., Pinheiro, C., Oliveira, M.M., Saibo, N. and<br />
Abreu I.A. "Plant SUMOylation and drought stress: who’s controlling who". XVII Congresso<br />
Nacional <strong>de</strong> Bioquímica, Porto, Portugal.<br />
2010. Pinheiro, C., Sergeant, K., Vaz Patto, C., Brites, C., Machado, C., Renaut, J. and Ricardo, C.P.<br />
"Seed protein polymorphism: maize germplasm discrimination and bread-making ability".<br />
The 4 th EuPA & 6 th ProCura Meeting, Estoril, Portugal.<br />
2010. Duarte, I., Silva, L.L., Simões, N., Imtiaz, M., Pinheiro, C., Lourenço, E. and Chaves, M.M. “<br />
Screening chickpea resistance to water <strong>de</strong>ficits: the yield perspective”. 5 th EPSO Conference,<br />
Lapland, Finland.<br />
2009. Queirós, F., Fidalgo, F., Almeida, D., Ricardo, C.P. and Pinheiro, C. “A protein extraction<br />
procedure for the proteome analysis of a NaCl-tolerant potato cell line”. Plant GEM, <strong>Lisboa</strong>,<br />
Portugal.<br />
2009. Pinheiro, C., Sergeant, K., Renaut, J. and Ricardo, C.P. “Seed storage proteins – the<br />
advantage of the Osborne fractionation in legume and cereal proteins”. 1 st International<br />
Congress on Analytical Proteomics, Costa da Caparica, Portugal.<br />
2009. Alves, M., Moes S., Jenö, P., Pinheiro, C., Gonçalves, D., Passarinho, J., Ricardo, C.P.P.<br />
“Proteins differentially expressed in Lupinus albus roots due boron <strong>de</strong>ficiency”. Plant<br />
Proteomics in Europe Management Committee and Working Groups 2 meeting (COST ACTION<br />
FA0603), Nitra, Slovakia.<br />
2008. Pinheiro, C., Sergeant, K., Renaut, J. and Ricardo, C.P. "Chymotrypsin, a valuable alternative<br />
to the use of trypsin in the study of seed storage proteins". ProteomLux 2008, International<br />
Conference on Proteomics in Plants, Microorganisms and Environment. Luxembourg.<br />
11/12
Carla Pinheiro_October 2012<br />
Annex 2 - Scientific referee in Journals in<strong>de</strong>xed at ISI (2008-2012)<br />
Q1 – journal ranks in the 1 st quartile of its category; Q2 – journal ranks in the 2 nd quartile of its category.<br />
Plant Sciences category<br />
Biochemical Research Methods category<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
Journal of Experimental Botany (Q1)<br />
Planta (Q1)<br />
Journal of Plant Physiology (Q1)<br />
Physiologia Plantarum (Q1)<br />
Functional Plant Biology (Q1)<br />
Plant Physiology and Biochemistry (Q1)<br />
Plant Science (Q1)<br />
Plant and Soil (Q1)<br />
Plant Molecular Biology Reporter (Q2)<br />
South African Journal of Botany (Q2)<br />
Acta Physiologiae Plantarum (Q2)<br />
<br />
<br />
<br />
Journal of Proteomics (Q1)<br />
Journal of Proteome Research (Q1)<br />
Molecular & Cellular Proteomics (Q1)<br />
Agriculture, multidisciplinary<br />
Food Science and Technology category<br />
<br />
Agronomy<br />
Journal of Agricultural Science (Q1)<br />
<br />
<br />
<br />
Plant Foods for Human Nutrition (Q1)<br />
Food Biophysics (Q1)<br />
International Journal of Food Science<br />
and Technology (Q2)<br />
<br />
Australian Journal of Crop Science (Q2)<br />
12/12