cancer. We have previously explored the mosaic patterns of DNA methylation and histone modification in cancer cells on a gene-by-gene basis; among our results has been the seminal finding of transcriptional silencing of tumour-suppressor genes by CpG-islandpromoter hypermethylation. However, recent technological advances are now allowing cancer epigenetics to be studied genome-wi<strong>de</strong> - an approach that we have taken to provi<strong>de</strong> both biological insight and new avenues for translational research. This 'upgra<strong>de</strong>' of cancer epigenetics research represent the backone for the future obtention of the first complete epigenomes that inclu<strong>de</strong> DNA methylomes and histone modification maps (Esteller, Nat Rev Genet, 2007; Esteller, N Engl J Med 2008; Esteller, The Lancet 2008; and Ballestar and Esteller, Cell, 2008). One of the first completed DNA methylome projects has been the full elucidation of the DNA methylation sequence of the double strand DNA viruses involved in human cancer (Genome Res, 2009). -Contribution of the DNA-methylation mediated silencing of microRNAs to human metastasis. In the last few years, microRNAs have started a revolution in molecular biology and emerged as key players in the metastasis process. For these reasons, it is extremely important to un<strong>de</strong>rstand the physiological and disease-associated mechanisms un<strong>de</strong>rlying the regulation of these small, single-stran<strong>de</strong>d RNAs. Thus, it was merely a matter of time before microRNAs, metastasis and epigenetics coinci<strong>de</strong>d (Lujambio et al., Cell Cycle 2009). The mechanisms un<strong>de</strong>rlying microRNA (miRNA) disruption in human disease are poorly un<strong>de</strong>rstood. In cancer cells, the transcriptional silencing of miRNAs with tumor suppressor function by CpG island promoter hypermethylation has emerged as a novel hallmark. We won<strong>de</strong>red if the same epigenetic disruption can contribute to human metastasis. We have observed that DNA hypermethylation of 5’-CpG islands of genomic secuences coding for miRNAs is associated with tumoral dissemination (Lujambio et al., Proc Natl Acad Sci USA, 2008). The main targets are miR-148a, miR-34bc and the miR-9 familiy which un<strong>de</strong>rgoes transcriptional inactivation by CpG island hypermethylation in human tumors with lymph no<strong>de</strong> metastasis. Interestingly, we functionally link the epigenetic loss of these miRNAs with the activation of EZH2, CDK6, C-MYC and E2F3, bona fi<strong>de</strong> oncogenic and tumor-enhancing factors. Most importantly, we have shown that miRNA disruption in cancer cells can also occur at other level: in a subset of colon, stomach and endometrial tumors, the production of mature miRNAs is perturbed by the presence of mutations in TRBP, a key gene of the miRNA processing machinery and the natural partner of DICER1 (Melo et al., Nature Genetics 2009). Selected Publications Melo SA, Ropero S, Moutinho C, Aaltonen LA, Yamamoto H, Calin GA, Rossi S, Fernan<strong>de</strong>z AF, Carneiro F, Oliveira C, Ferreira B, Liu CG, Villanueva A, Capella G, Schwartz Jr S, Shiekhattar R, Esteller M. A TARBP2 mutation in human cancer impairs microRNA processing and DICER1 function. Nature Genetics, 41, 365-70, 2009 Fernan<strong>de</strong>z AF, Rosales C, Lopez-Nieva P, Graña O, Ballestar E, Ropero S, Espada J, Melo SA, Lujambio A, Fraga MF, Pino I, Javierre B, Carmona FJ, Acquadro F, Steenbergen RDM, Snij<strong>de</strong>rs PJF, Chris J. Meijer, Pascal Pineau, Anne Dejean, Lloveras B, Capella G, Quer J, Buti M, Esteban JI, Allen<strong>de</strong> H, Rodriguez-Frias F, Castellsague X, Minarovits J, Ponce J, Capello D, Gaidano G, Cigudosa JC, Gomez- Lopez G, Pisano DG, Valencia A, Piris MA, Bosch FX, Cahir- McFarland E, Kieff E, Esteller M. The dynamic DNA methylomes of double-stran<strong>de</strong>d DNA viruses associated with human cancer. Genome Research, 19, 438-51, 2009. Ballestar E, Esteller M. SnapShot: the human DNA methylome in health and disease. Cell, 135, 1144-1144.e1, 2008. Lujambio A, Calin GA, Villanueva A, Ropero S, Sánchez- Céspe<strong>de</strong>s M, Blanco D, Montuenga LM, Rossi S, Nicoloso MS, Faller WJ, Gallagher WM, Eccles SA, Croce CM, Esteller M. A microRNA DNA methylation signature for human cancer metastasis. Proc Natl Acad Sci USA, 105, 13556-61, 2008. Esteller M. Epigenetics of Cancer. New England Journal of Medicine, 358, 1148-59 , 2008. Esteller M. Cancer epigenomics: DNA methylomes and histone modification maps. Nature Reviews Genetics, 8, 286- 98, 2007. Agrelo R, Cheng WS, Setien F, Ropero S, Espada J, Fraga MF, Herranz M, Paz MF, Sanchez-Cespe<strong>de</strong>s M, Artiga MJ, Guerrero D, Castells A, von Kobbe C, Bohr VA, Esteller M. Epigenetic inactivation of the premature aging Werner syndrome gene in human cancer. Proc Natl Acad Sci USA. 102, 103, 8822-7, 2006. Ropero S, Fraga MF, Ballestar E, Hamelin R, Yamamoto H, Boix-Chornet M, Caballero R, Alaminos M, Setien F, Paz MF, Herranz M, Palacios J, Arango D, Orntoft TF, Aaltonen LA, Schwartz Jr S., Esteller M. A truncating mutation of HDAC2 in human cancers confers resistance to histone <strong>de</strong>acetylase inhibition. Nature Genetics, 38, 566-9, 2006. Fraga MF, Ballestar E, Paz MF, Ropero S, Setien F, Ballestar ML, Heine-Suner D, Cigudosa JC, Urioste M, Benitez J, Boix-Chornet M, Sanchez-Aguilera A, Ling C, Carlsson E, Poulsen P, Vaag A, Stephan Z, Spector TD, Wu YZ, Plass C, Esteller M. Epigenetic differences arise during the lifetime of monozygotic twins. Proc Natl Acad Sci USA. 102, 10604- 10609, 2005. Fraga MF, Ballestar E, Villar-Garea A, Boix-Chornet M, Espada J, Schotta G, Bonaldi T, Haydon C, Ropero S, Petrie K, Iyer NG, Pérez-Rosado A, Calvo E, Lopez JA, Cano A, Calasanz MJ, Colomer D, Piris MA, Ahn N, Imhof A, Caldas C, Jenuwein T, Esteller M. Loss of acetylated lysine 16 and trimethylated lysine 20 of histone H4 is a common hallmark of human cancer. Nature Genetics, 37, 391- 400, 2005. Cancer Epigenetics and Biology Symposium 34 28, 29 May 2009, Barcelona
Dr Montse Sanchez-Cespe<strong>de</strong>s Genes and Cancer Group Montse Sanchez-Cespe<strong>de</strong>s was born in Badalona (Barcelona) in 1968. She graduated in Biology and specialized in Genetics and Molecular Biology from the Universitat <strong>de</strong> Barcelona and carried out her Ph.D. work at the Molecular Biology of Cancer Laboratory, the Hospital ”Germans Trias i Pujol” in Badalona. From 1997 to 2001 she was a Postdoctoral Fellow at the Johns Hopkins University School of Medicine (Baltimore-USA). She focused on the i<strong>de</strong>ntification of novel genetic and molecular alterations in cancer. More specifically she looked for recurrent chromosomal abnormalities in lung tumours and genetically analysed candidate tumour suppressor genes in these regions. From October 2001 to 2004 she lead the lung cancer biological research at the CNIO and from 2004 to September 2008 she was the Group Lea<strong>de</strong>r of the Lung Cancer Group at the same institution. She is member of international scientific societies and reviewer for many journals and funding agencies. Her list of over 60 original publications and reviews in international and peer-reviewed journals of prestige serves as a testament of the experience she has already accumulated in the field of cancer research. Her current research is <strong>de</strong>voted to the i<strong>de</strong>ntification of genes that are genetically altered in tumors and to the functional analysis of their implication in cancer <strong>de</strong>velopment. The complete genetic characterization of tumours is important not only to un<strong>de</strong>rstand tumour biology, but also to the <strong>de</strong>velopment of new drugs and to the selection of patients that may benefit of a given targeted cancer therapy. The promise of using proteins enco<strong>de</strong>d by mutant cancer genes as molecular targets for the <strong>de</strong>velopment of novel therapies drives en<strong>de</strong>avours to i<strong>de</strong>ntify novel mutated cancer genes as well as to create catalogues of somatic mutations in cancer. Our current projects in the laboratory are focused in the following directions: i) to i<strong>de</strong>ntify novel genes altered in cancer; ii) to un<strong>de</strong>rstand their contribution to cancer <strong>de</strong>velopment and iii) to investigate correlations with clinical and pathological characteristics. Genome-wi<strong>de</strong> screenings allow the i<strong>de</strong>ntification of the chromosomal regions that are frequently <strong>de</strong>leted in cancer and that may contain tumor suppressor genes. In lung cancer, one of the most frequently <strong>de</strong>leted chromosomal arms Postdoctoral researchers: Eva Pros, Salvador Rodriguez-Nieto PhD Stu<strong>de</strong>nts: Ester Bonastre, Sandra Castillo, Rossana G Restani, Octavio Romero Technician: Albert Coll is 19p. During the past years we unveiled that LKB1, the Peutz-Jeghers syndrome (PJS) gene, was also mutated/inactivated in lung cancer. This exciting observation led us to <strong>de</strong>vote intense efforts to fully un<strong>de</strong>rstand how LKB1 inactivation contributes to carcinogenesis. To date we have provi<strong>de</strong>d important data on the mutational profile of LKB1 in lung cancer and on its association with various molecular and clinic-pathological characteristics. We also provi<strong>de</strong>d further insights in the relationship between LKB1 alterations in lung cancer and impaired AMPK activity and mTOR inhibition upon energetic stress. BRG1 is another gene that allocates on chromosome 19p and enco<strong>de</strong>s and 35