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634 Chapter 14. Statistical Description of Data y (in which case the two variables are associated!): H(y|x) − H(y) =− � = � i,j ≤ � i,j i,j pij ln pij/pi· p·j pij ln p·jpi· pij pij � p·jpi· pij = � pi·p·j − � i,j =1− 1=0 i,j � − 1 pij (14.4.13) where the inequality follows from the fact ln w ≤ w − 1 (14.4.14) We now have everything we need to define a measure of the “dependency” of y on x, that is to say a measure of association. This measure is sometimes called the uncertainty coefficient of y. We will denote it as U(y|x), H(y) − H(y|x) U(y|x) ≡ (14.4.15) H(y) This measure lies between zero and one, with the value 0 indicating that x and y have no association, the value 1 indicating that knowledge of x completely predicts y. For in-between values, U(y|x) gives the fraction of y’s entropy H(y) that is lost if x is already known (i.e., that is redundant with the information in x). In our game of “twenty questions,” U(y|x) is the fractional loss in the utility of question y if question x is to be asked first. If we wish to view x as the dependent variable, y as the independent one, then interchanging x and y we can of course define the dependency of x on y, H(x) − H(x|y) U(x|y) ≡ (14.4.16) H(x) If we want to treat x and y symmetrically, then the useful combination turns out to be � � H(y)+H(x) − H(x, y) U(x, y) ≡ 2 (14.4.17) H(x)+H(y) If the two variables are completely independent, then H(x, y) =H(x)+H(y), so (14.4.17) vanishes. If the two variables are completely dependent, then H(x) = H(y) =H(x, y), so (14.4.16) equals unity. In fact, you can use the identities (easily proved from equations 14.4.9–14.4.12) H(x, y) =H(x)+H(y|x) =H(y)+H(x|y) (14.4.18) to show that U(x, y) = H(x)U(x|y)+H(y)U(y|x) (14.4.19) H(x)+H(y) i.e., that the symmetrical measure is just a weighted average of the two asymmetrical measures (14.4.15) and (14.4.16),weighted by the entropy of each variable separately. Here is a program for computing all the quantities discussed, H(x), H(y), H(x|y), H(y|x), H(x, y), U(x|y), U(y|x), and U(x, y): Sample page from NUMERICAL RECIPES IN C: THE ART OF SCIENTIFIC COMPUTING (ISBN 0-521-43108-5) Copyright (C) 1988-1992 by Cambridge University Press. Programs Copyright (C) 1988-1992 by <strong>Numerical</strong> Recipes Software. Permission is granted for internet users to make one paper copy for their own personal use. Further reproduction, or any copying of machinereadable files (including this one) to any server computer, is strictly prohibited. To order <strong>Numerical</strong> Recipes books or CDROMs, visit website http://www.nr.com or call 1-800-872-7423 (North America only), or send email to directcustserv@cambridge.org (outside North America).
14.4 Contingency Table Analysis of Two Distributions 635 #include #include "nrutil.h" #define TINY 1.0e-30 A small number. void cntab2(int **nn, int ni, int nj, float *h, float *hx, float *hy, float *hygx, float *hxgy, float *uygx, float *uxgy, float *uxy) Given a two-dimensional contingency table in the form of an integer array nn[i][j], wherei labels the x variable and ranges from 1 to ni, j labels the y variable and ranges from 1 to nj, this routine returns the entropy h of the whole table, the entropy hx of the x distribution, the entropy hy of the y distribution, the entropy hygx of y given x, theentropyhxgy of x given y, the dependency uygx of y on x (eq. 14.4.15), the dependency uxgy of x on y (eq. 14.4.16), and the symmetrical dependency uxy (eq. 14.4.17). { int i,j; float sum=0.0,p,*sumi,*sumj; } sumi=vector(1,ni); sumj=vector(1,nj); for (i=1;i
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Numerical Recipes in C The Art of S
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Contents Preface to the Second Edit
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Contents vii 7.2 Transformation Met
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Contents ix 15.6 Confidence Limits
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Preface to the Second Edition Our a
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Preface to the Second Edition xiii
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Preface to the First Edition xv lin
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Types of License Offered License In
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Computer Programs by Chapter and Se
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Chapter 1. Preliminaries 1.0 Introd
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1.0 Introduction 3 Tested Machines
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1.1 Program Organization and Contro
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true 1.1 Program Organization and C
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} 1.2 Some C Conventions for Scient
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1.2 Some C Conventions for Scientif
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(a) **m (b) **m 1.2 Some C Conventi
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= 0 3 = 0 = 0 = 0 = 0 = 0 1 ⁄ 2 1
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1.3 Error, Accuracy, and Stability
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2.0 Introduction 33 Accumulated rou
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2.0 Introduction 35 between singula
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2.1 Gauss-Jordan Elimination 37 Eli
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2.1 Gauss-Jordan Elimination 39 pre
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2.2 Gaussian Elimination with Backs
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2.3 LU Decomposition and Its Applic
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a b c d 2.3 LU Decomposition and It
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2.3 LU Decomposition and Its Applic
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2.4 Tridiagonal and Band Diagonal S
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2.4 Tridiagonal and Band Diagonal S
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δx 2.5 Iterative Improvement of a
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2.5 Iterative Improvement of a Solu
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2.6 Singular Value Decomposition 59
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SVD of a Square Matrix 2.6 Singular
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solutions of A ⋅ x = d null space
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} 2.6 Singular Value Decomposition
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2.7 Sparse Linear Systems 2.7 Spars
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2.7 Sparse Linear Systems 73 prescr
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2.7 Sparse Linear Systems 75 Here
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2.7 Sparse Linear Systems 77 Finall
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2.7 Sparse Linear Systems 79 In row
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} 2.7 Sparse Linear Systems 81 jp=i
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2.7 Sparse Linear Systems 83 Matrix
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2.7 Sparse Linear Systems 85 while
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p=dvector(1,n); pp=dvector(1,n); r=
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} 2.7 Sparse Linear Systems 89 void
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2.8 Vandermonde Matrices and Toepli
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2.9 Cholesky Decomposition 97 If yo
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2.10 QR Decomposition 99 The standa
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#include #include "nrutil.h" 2.10
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in terms of which 2.11 Is Matrix In
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Chapter 3. Interpolation and Extrap
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(a) (b) 3.0 Introduction 107 Figure
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3.1 Polynomial Interpolation and Ex
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3.2 Rational Function Interpolation
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3.3 Cubic Spline Interpolation 113
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3.3 Cubic Spline Interpolation 115
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3.4 How to Search an Ordered Table
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} 3.4 How to Search an Ordered Tabl
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#include "nrutil.h" 3.5 Coefficient
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3.6 Interpolation in Two or More Di
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} int j; float *ymtmp; 3.6 Interpol
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3.6 Interpolation in Two or More Di
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Chapter 4. Integration of Functions
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4.1 Classical Formulas for Equally
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#define FUNC(x) ((*func)(x)) 4.2 El
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4.2 Elementary Algorithms 139 trapz
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4.4 Improper Integrals 141 which co
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4.4 Improper Integrals 143 The rout
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4.4 Improper Integrals 145 If you n
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4.5 Gaussian Quadratures and Orthog
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Gauss-Legendre: Gauss-Chebyshev: Ga
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4.6 Multidimensional Integrals 161
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Chapter 5. Evaluation of Functions
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5.1 Series and Their Convergence 16
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5.2 Evaluation of Continued Fractio
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5.3 Polynomials and Rational Functi
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5.3 Polynomials and Rational Functi
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5.4 Complex Arithmetic 177 Actually
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5.5 Recurrence Relations and Clensh
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5.5 Recurrence Relations and Clensh
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5.6 Quadratic and Cubic Equations 1
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5.6 Quadratic and Cubic Equations 1
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5.7 Numerical Derivatives 187 With
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} 5.7 Numerical Derivatives 189 The
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Chebyshev polynomials 1 .5 0 −.5
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} 5.8 Chebyshev Approximation 193 f
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5.9 Derivatives or Integrals of a C
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5.10 Polynomial Approximation from
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5.11 Economization of Power Series
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5.12 Padé Approximants 201 then R(
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5.12 Padé Approximants 203 cof[2*n
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5.13 Rational Chebyshev Approximati
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5.14 Evaluation of Functions by Pat
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5.14 Evaluation of Functions by Pat
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6.1 Gamma, Beta, and Related Functi
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6.1 Gamma, Beta, and Related Functi
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incomplete gamma function P(a,x) 1.
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} void nrerror(char error_text[]);
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#include 6.2 Incomplete Gamma Func
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6.3 Exponential Integrals 223 where
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6.3 Exponential Integrals 225 #incl
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6.4 Incomplete Beta Function 227 Th
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6.4 Incomplete Beta Function 229 So
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Bessel functions 1 .5 0 −.5 −1
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} 6.5 Bessel Functions of Integer O
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6.5 Bessel Functions of Integer Ord
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modified Bessel functions 4 3 2 1 6
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6.6 Modified Bessel Functions of In
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6.7 Bessel Functions of Fractional
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6.8 Spherical Harmonics 253 The fir
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6.9 Fresnel Integrals, Cosine and S
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} 6.9 Fresnel Integrals, Cosine and
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} 6.10 Dawson’s Integral 259 } if
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6.11 Elliptic Integrals and Jacobia
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where 6.11 Elliptic Integrals and J
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#define TINY 1.0e-25 #define BIG 4.
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6.11 Elliptic Integrals and Jacobia
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#include #include "nrutil.h" 6.11
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6.12 Hypergeometric Functions 271 C
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#include "complex.h" #define ONE Co
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7.1 Uniform Deviates 275 As for ref
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7.1 Uniform Deviates 277 This corre
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#define IA 16807 #define IM 2147483
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RAN 3 1 7.1 Uniform Deviates 281 iy
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7.1 Uniform Deviates 283 from the w
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7.1 Uniform Deviates 285 Constants
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7.2 Transformation Method: Exponent
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7.2 Transformation Method: Exponent
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first random deviate in 7.3 Rejecti
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} 7.3 Rejection Method: Gamma, Pois
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} 7.3 Rejection Method: Gamma, Pois
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7.4 Generation of Random Bits 297 s
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7.5 Random Sequences Based on Data
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7.6 Simple Monte Carlo Integration
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7.7 Quasi- (that is, Sub-) Random S
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Chapter 8. Sorting 8.0 Introduction
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8.1 Straight Insertion and Shell’
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8.2 Quicksort 333 question of the b
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8.2 Quicksort 335 istack=lvector(1,
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a 4 a 2 8.3 Heapsort 337 a 5 a 1 a
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8.5 Selecting the Mth Largest 341 w
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} } } } 8.6 Determination of Equiva
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Chapter 9. Root Finding and Nonline
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9.0 Introduction 349 good first gue
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(a) (b) (c) (d) 9.1 Bracketing and
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Bisection Method 9.1 Bracketing and
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9.2 Secant Method, False Position M
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} 9.3 Van Wijngaarden-Dekker-Brent
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9.4 Newton-Raphson Method Using Der
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9.5 Roots of Polynomials 9.5 Roots
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9.5 Roots of Polynomials 371 tentat
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9.5 Roots of Polynomials 373 The me
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Eigenvalue Methods 9.5 Roots of Pol
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9.5 Roots of Polynomials 377 of goi
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9.6 Newton-Raphson Method for Nonli
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9.7 Globally Convergent Methods for
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X1 A B C 10.0 Introduction 395 D Fi
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10.1 Golden Section Search in One D
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10.8 Linear Programming and the Sim
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10.9 Simulated Annealing Methods 44
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} } 10.9 Simulated Annealing Method
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} free_ivector(jorder,1,ncity); #in
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Definitions and Basic Facts 11.0 In
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11.0 Introduction 459 In both the d
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11.1 Jacobi Transformations of a Sy
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and equation (12.0.1) looks like th
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15.6 Confidence Limits on Estimated
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16.0 Introduction 709 problem where
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y(x) 16.1 Runge-Kutta Method 711 1
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16.2 Adaptive Stepsize Control for
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17.1 The Shooting Method 17.1 The S
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17.3 Relaxation Methods 763 depende
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17.4 A Worked Example: Spheroidal H
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} 17.4 A Worked Example: Spheroidal
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17.5 Automated Allocation of Mesh P
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17.6 Handling Internal Boundary Con
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17.6 Handling Internal Boundary Con
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18.0 Introduction 789 is called a F
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18.1 Fredholm Equations of the Seco
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#include "nrutil.h" 18.1 Fredholm E
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18.2 Volterra Equations 795 in §18
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18.3 Integral Equations with Singul
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f (x) 1 .5 0 −.5 0 18.3 Integral
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18.4 Inverse Problems and the Use o
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18.4 Inverse Problems and the Use o
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18.5 Linear Regularization Methods
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18.6 Backus-Gilbert Method 815 nece
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18.6 Backus-Gilbert Method 817 Subs
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18.7 Maximum Entropy Image Restorat
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Chapter 19. Partial Differential Eq
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19.0 Introduction 829 possible stab
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y L ∆ y1 19.0 Introduction 831 A
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19.0 Introduction 833 So-called rap
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19.1 Flux-Conservative Initial Valu
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t or n 19.1 Flux-Conservative Initi
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19.2 Diffusive Initial Value Proble
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19.2 Diffusive Initial Value Proble
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and the heuristic stability criteri
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19.3 Initial Value Problems in Mult
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19.3 Initial Value Problems in Mult
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19.4 Fourier and Cyclic Reduction M
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FACR Method 19.5 Relaxation Methods
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19.5 Relaxation Methods for Boundar
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19.6 Multigrid Methods for Boundary
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S S S E γ = 1 19.6 Multigrid Metho
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} 19.6 Multigrid Methods for Bounda
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#include 19.6 Multigrid Methods fo
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Chapter 20. Less-Numerical Algorith
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20.1 Diagnosing Machine Parameters
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20.1 Diagnosing Machine Parameters
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(a) G(i) (b) MSB 4 3 2 1 0 LSB i MS
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20.3 Cyclic Redundancy and Other Ch
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} 20.4 Huffman Coding and Compressi
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20.4 Huffman Coding and Compression
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} 20.4 Huffman Coding and Compressi
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} } } 20.4 Huffman Coding and Compr
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1.0 0.9 0.8 0.7 0.6 0.5 0.4 0.3 0.2
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20.5 Arithmetic Coding 913 Individu
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20.6 Arithmetic at Arbitrary Precis
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} for (j=n;j>=1;j--) { ireg=u[j]+HI
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#include "nrutil.h" #define RX 256.
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} 20.6 Arithmetic at Arbitrary Prec
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