Eukaryotes of the Cariaco, Soledad, <strong>and</strong> Santa Barbara Basins 39laden Cariaco sediments. The single gastrotrich morphotype ismost likely a new Urodasys species because it is smaller thanits Santa Barbara Basin congener U. anorektoxys (Todaro et al.,2000). The Cariaco polychaete is a nerillid, but not the speciespresent in Santa Barbara Basin (Xenonerilla bactericola, Mülleret al., 2001). Most likely, this Cariaco polychaete is new to science(M. Müller, 2002, personal commun.). A single oligochaetewas also observed in the Cariaco Beggiatoa sample; additionalspecimens are required for its identification.Prevalence of Putative SymbiontsEach of the major eukaryotic biomass contributors in SantaBarbara (Nonionella stella) <strong>and</strong> Cariaco (Virgulinella fragilis)exhibit the unusual characteristic of sequestering chloroplasts(Bernhard <strong>and</strong> Bowser, 1999; Bernhard, 2003). Although theseforaminifers live in darkness, the sequestered plastids are presumablycrucial to their dominance in these sulfide-enrichedenvironments (Grzymski et al., 2002). The ultrastructure offoraminifers from Soledad has not been analyzed, so it isunclear if its dominant species, Bolivina subadvena, similarlysequesters chloroplasts.Neither the Soledad flagellate nor ciliate community wasdominated by specimens with associated putative symbionts(in terms of either abundance or biomass; Fig. 3). This contrastswith those communities of Santa Barbara Basin (Fig. 3;Bernhard et al., 2000). The flagellate <strong>and</strong> ciliate community ofCariaco’s Beggiatoa-laden sediments also appeared to be dominated(in terms of abundance <strong>and</strong> biovolume) by eukaryotes withprokaryotic associates. Although the available non-quantitativeCariaco sample only allows relative comparisons, ciliates withputative symbionts comprised 96.5% of the ciliate populationwhile 57.7% of the flagellates similarly had putative symbionts.As in Santa Barbara’s Xenonerilla bactericola (Bernhardet al., 2000; Müller et al., 2001), the Cariaco polychaete hadrod-shaped bacterial ectobionts (Fig. 4). The epibionts had welldevelopedattachments to the polychaete epidermis (Fig. 4B).A specimen of a Cariaco gastrotrich appeared to have bacterialassociates when examined using DAPI to identify nuclei <strong>and</strong>prokaryotes. Ultrastructural analysis of this species is pending.In the few specimens examined ultrastructurally to date, putativesymbionts were not observed in either of the other Cariaco metazoans(i.e., nematode, oligochaete). Although the ultrastructureof Soledad nematodes has not yet been examined, DAPI resultssuggest the presence of bacterial ectobionts.Sub-Millimeter Life Positions in Laminated Soledad <strong>and</strong>Santa Barbara SedimentsFigure 3. Histograms of flagellate (A, B) <strong>and</strong> ciliate (C, D) abundance<strong>and</strong> biovolume data, presented for specimens with <strong>and</strong> without putativesymbionts. SBB—Santa Barbara Basin.Eukaryotes in Soledad sediments were concentrated inthe surface ~2 mm, even when bottom water O 2was relativelyhigh (2.7 µM; Fig. 5). When such “high” oxygen concentrationsoccurred in Santa Barbara, the eukaryotes were also concentratedin the top few mm, but they also occurred in relatively high abundancesto depths of at least 8 mm (2.4 µM O 2; Bernhard et al.,2003). In the Soledad FLEC material examined to date, veryfew protists (foraminifera, flagellates, ciliates) were observedat a depth >2mm, although nematodes were noted to depths of~1.5 cm. Life-position data is not available for Cariaco sediments.Soledad FLEC sections show that the laminae in the top2 mm were substantially disrupted (Fig. 6). The disruptionswere not caused by sampling because prokaryotes appeared toselectively inhabit lighter-colored layers rather than darker layers(Fig. 6A). Because gravity cores <strong>and</strong> piston cores show thatSoledad subsurface sediments are laminated to a depth of >5 m(van Geen et al., 2001), it is possible that disrupted laminae“realign” during compaction due to sediment burial or that modernenvironmental conditions differ from those that produced thewell-preserved laminae.Higher magnification examination of Soledad FLECmaterial shows some of the abundant foraminifera, flagellates,ciliates, <strong>and</strong> filamentous bacteria other than Thioploca (Fig. 7).Specimens of the agglutinated foraminifer Leptohalysis sp. <strong>and</strong>the tectinous foraminifer Nodellum sp. were easily identified(Fig. 7A). The presence of Nodellum sp. in Soledad samples is,
40 J.M. Bernhard <strong>and</strong> K.R. BuckFigure 4. Transmission electron micrographs of the undescribed Cariaco polychaete. (A) View including the polychaete epidermis <strong>and</strong> attachedbacterial ectobionts. (B) Higher-magnification view showing morphological modifications at attachment points (arrows). m—mitochondria.Scale bars: A =1 µm; B = 200 nm.to our knowledge, the first recorded occurrence of this tectinousgenus in laminated sediments.Sub-millimeter life positions of Santa Barbara Basineukaryotes have recently been described (Bernhard et al., 2003).Examination of additional material indicates that metazoans didnot occur exclusively at the sediment-water interface even whenoxygen was nearly undetectable (Fig. 8; 0.1 µM O 2; Bernhard etal., 2003). More specifically, polychaetes <strong>and</strong> nematodes wereboth observed at depths of at least 6 mm (Fig. 8) in laminatedsediments (see Figure 2D in Bernhard et al., 2003).Given the apparently strict occurrence of Soledad eukaryotesin the surface 1–2 mm (Fig. 5), abundance data illustrated in Figure2 was recalculated to determine the density in the top 2 mmof Soledad sediments. When considered in this manner, Soledadeukaryote densities <strong>and</strong> biovolume in Soledad exceed those in thesurface centimeter of Santa Barbara Basin (i.e., Soledad density~55.9 × 10 4 cm −3 versus Santa Barbara ~43.3 × 10 4 cm −3 ; Soledadbiovolume ~1101 nl cm −3 versus Santa Barbara ~967 nl cm −3 ).Such a perspective suggests that ecological approaches at thecentimeter scale are not always representative of in situ conditionsat scales relevant to the microorganisms.DISCUSSIONOur observations suggest that, in general, the eukaryoticfauna of deep-water sulfidic habitats is relatively diverse, with ahigh dominance of few or one species, <strong>and</strong> a high total abundance,if considered at the appropriate scale. In addition, protists typicallydominate abundance <strong>and</strong> biovolume, <strong>and</strong> most eukaryotictaxa have bacterial associates. Taxonomic comparisons indicatesimilarities in metazoan taxa, with nematodes in all three basins<strong>and</strong> gastrotrichs <strong>and</strong> primitive polychaetes occurring in two of thebasins (Table 2). In at least two of the three basins, the dominantforaminifer sequesters chloroplasts, even though the basin seafloorlies far below the maximum extent of the photic zone.Although little is known regarding the taxonomy of flagellates<strong>and</strong> ciliates from oxygen-depleted deep-water sediments(or their associated putative symbionts), much is known aboutthe comparable fauna from shallow-water environments (e.g.,Fenchel <strong>and</strong> Finlay, 1995). Given the recent <strong>and</strong> controversialassertion that protistan species are cosmopolitan <strong>and</strong>, by extrapolation,of limited diversity (Finlay, 2002), deep-water nanobiotaare crucial communities with which to test this hypothesis. Our
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