Eukaryotic Gene Prediction - Rice Genome Annotation Project

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Signal SensorsA signal sensor evaluates fixed-length featuresin DNA. Start codons Stop codons Donor sites Acceptor sites Promoters Poly-A signals
Page 3: Gene Structure
Page 8 and 9: ab initio Gene PredictionAdopt a ri
Page 10 and 11: Imperfect ModelGT…………..AG
Page 12 and 13: Nucleotide/Base LevelPrediction acc
Page 14 and 15: Gene/Protein LevelPrediction accura
Page 16 and 17: Performance Species-specific settin
Page 18 and 19: Gene Finders
Page 20 and 21: Challenges of Intrinsic ApproachesA
Page 22 and 23: Similarity-based Gene Prediction ES
Page 24 and 25: Pros and ConsProsConsHigh accuracyU
Page 26 and 27: Gene Structure of Syntenic and non-
Page 28 and 29: Comparative Analysis of CerealGene
Page 30 and 31: Tiling Array
Page 32 and 33: Gene Prediction Approaches Intrinsi
Page 34 and 35: EVM
Page 36 and 37: RiceGAAC
Page 38 and 39: SummaryNothing is perfectEach gene
Page 40 and 41: Sorghum-Rice Synteny and EST Read P
Page 42 and 43: Expression DataData TypeEST/FL-cDNA
Page 44 and 45: GATCGATCI. Library constructionBren
Page 46 and 47: Refine Gene Structure

Eukaryotic Gene Prediction - Rice Genome Annotation Project

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