Henning Hermjakob - ProteomeBinders

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Data types relevant for Proteome Binders• Molecular entities• Binders• Targets• Experimental data• Applications/Validation Protocols and outcomes• Systematic, for example Western• Specific: Publication by researcher X: Successful use of binder Y• Production parameters• …Henning HermjakobProteomics Services TeamProteomeBindersAlpbach meeting, March 2007
Data fragmentation• Difficult to access allrelevant data• Difficult tosynchroniseefforts…User**Commercial/BiocompareProteomeBindersHPANCIHenning HermjakobProteomics Services TeamProteomeBindersAlpbach meeting, March 2007
Page 1 and 2: Designing a Binder DatabaseProteome
Page 3: Initiatives for Proteome Binderdeve
Page 7 and 8: HUPO PSI MI XML format• Community
Page 9 and 10: PSI MI components• XML format•
Page 11 and 12: Working hypothesis:Binder-Target bi
Page 13 and 14: Data model development• Mapping r
Page 15 and 16: Next steps• Development of protot
Page 17: Acknowledgements• Sandrine Palcy,

Henning Hermjakob - ProteomeBinders

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