CHEM 165,265/BIMM 162/BGGN 262 REFERENCE LISTS 1 The ...

CHEM 165,265/BIMM 162/BGGN 262REFERENCE LISTSElectron Tomography – Technical (Cont’d)Sherman, M. B., J. Jakana, S. Sun, P. Matsudaira, W. Chiu and M. F. Schmid (1997) A strategy for electrontomographic data collection and crystallographic reconstruction of biological bundles. J. Struct. Biol.120:245-256.Stoschek, A. and R. Hegerl (1997) Denoising of electron tomographic reconstructions using multiscaletransformations. J. Struct. Biol. 120:257-265.Frangakis, A. S., and F. Forster (2004) Computational exploration of structural information from cryo-electrontomograms. Curr. Opin. Struct. Biol. 14:325-331. Overview of image processing issues; extensivereference list.Electron Tomography – MacromoleculesSkoglund, U., K. Andersson, B. Strandberg and B. Daneholt (1986) Three-dimensional structure of a specificpre-messenger RNP particle established by electron microscope tomography. Nature 319:560-564.Electron Cryo-Tomography - MacromoleculesSkoglund, U., L.-G. Ofverstedt, R. M. Burnett and G. Bricogne (1996) Maximum-entropy three-dimensionalreconstruction with deconvolution of the contrast transfer function: A test application with adenovirus. J.Struct. Biol. 117:173-188.Schmitz, H., M. C. Reedy, M. K. Reedy, R. T. Tregear, H. Winkler and K. A. Taylor (1996) Electrontomography of insect flight muscle in rigor and AMPPNP at 23°C. J. Mol. Biol. 264:279-301.Horowitz, R. A., A. J. Koster, J. Walz and C. L. Woodcock (1997) Automated electron microscope tomographyof frozen-hydrated chromatin: The irregular three-dimensional zigzag architecture persists in compact,isolated fibers. J. Struct. Biol. 120:353-362.Taylor, K. A., J. Tang, Y. Cheng and H. Winkler (1997) The use of electron tomography for structural analysisof disordered protein arrays. J. Struct. Biol. 120:372-386.•Walz, J., D. Typke, M. Nitsch, A. J. Koster, R. Hegerl and W. Baumeister (1997) Electron tomography ofsingle ice-embedded macromolecules: Three-dimensional alignment and classification. J. Struct. Biol.120:387-395.Medalia, O., A. J. Koster, A. Tocilij, M. Angenitzki, J. Sperling, Z. Berkovitch-Yellin and R. Sperling (1997)Automated eletron tomography of large nuclear RNP (lnRNP) particles - the naturally assembled complexesof precursor messenger RNA and splicing factors. J. Struct. Biol. 120:228-236.Metoz, F., I. Arnal and R. H. Wade (1997) Tomography without tilt: Three-dimensional imaging ofmicrotubule/motor complexes. J. Struct. Biol. 118:159-168.Walz, J., T. Tamura, N. Tamura, R. Grimm, W. Baumeister and A. J. Koster (1997) Tricorn protease exists asan icosahedral supermolecule in vivo. Molecular Cell 1:59-65.Frangakis, A. S., J. Bohm, F. Forster, S. Nickell, D. Nicastro, D. Typke, R. Hegerl and W. Baumeister (2002)Identification of macromolecular complexes in cryoelectron tomograms of phantom cells. Proc. Natl. Acad.Sci. USA 99:14153-14158.McEwen, B. F., M. Marko, C. E. Hsieh, and C. Mannella (2002) Use of frozen-hydrated axonemes to assessimaging parameters and resolution limits in cryoelectron tomography. J. Struct. Biol. 138:47-57.Grunewald, K., O. Medalia, A. Gross, A. C. Steven, and W. Baumeister (2003) Prospects of electroncryotomography to visualize macromolecular complexes inside cellular compartments: implications ofcrowding. Biol. Chem. 100:577-591.Electron Tomography –Cells and OrganellesMcEwen, B. F., Radermacher, M., Rieder, C. L. and J. Frank (1986) Tomographic three-dimensionalreconstruction of cilia ultrastructure from thick sections. Proc. Natl. Acad. Sci. USA 83:9040-9044.Frank, J., McEwen, B. F., Radermacher, M., Turner, J. N. and Rieder, C. L. (1987) Three-dimensionaltomographic reconstruction in high voltage electron microscopy. J. Elec. Microsc. Tech. 6:193-205.48