CHEM 165,265/BIMM 162/BGGN 262 REFERENCE LISTS 1 The ...

CHEM 165,265/BIMM 162/BGGN 262REFERENCE LISTSIMAGE PROCESSING AND 3D RECONSTRUCTION (Cont'd)F. Correlation AveragingCorrelation Averaging - ReviewsFrank, J. (1979) Image analysis in electron microscopy. J. Microscopy 117:25-38.Frank, J. and Goldfarb, W. (1980) Methods for averaging of single molecules and lattice-fragments. InElectron Microscopy at Molecular Dimensions (W. Baumeister and W. Vogell, eds.) Springer-Verlag, Berlin261-269.vanHeel, M., M. Schatz and E. Orlova (1992) Correlation functions revisited. Ultramicrosc. 46:307-316.Correlation Averaging - TechnicalFrank, J. (1975) Averaging of low exposure electron micrographs of non- periodic objects. Ultramicrosc.1:159-162.Frank, J. and Al-Ali, L. (1975) Signal-to-noise ratio of electron micrographs obtained by cross correlation.Nature (London) 256:376-379.Saxton, W. O. and Frank, J. (1977) Motif detection in quantum noise-limited electron micrographs by crosscorrelation.Ultramicrosc. 2:219-227.Arnot, N. R. and Saxton, W. O. (1979) Improvemement of cross-correlation peaks by image filtering. Optik53:271-279.Saxton, W. O. (1980) Matching and averaging over fragmented lattices. In Electron Microscopy at MolecularDimensions (W. Baumeister and W. Vogell, eds.) Springer-Verlag, Berlin 245-255.Frank, J. (1982) New methods for averaging non-periodic objects and distorted crystals in biological electronmicroscopy. Optik 63:67-89.Kam, Z., I. Gafni and M. Kessel (1982) Enhancement of two-dimensional projections from electronmicroscope images using spatial correlations. Ultramicrosc. 7:311-320.Frank, J., W. Chiu and L. Degn (1988) The characterization of structural variations within a crystal field.Ultramicrosc. 26:345-360.Unser, M., B. L. Trus and A. C. Steven (1989) Normalization procedures and factorial representations forclassification of correlation-aligned images: A comparative study. Ultramicrosc. 30:299-310.Unser, M., B. L. Trus, J. Frank and A. C. Steven (1989) The spectral signal-to-noise ratio resolution criterion:Computational efficiency and statistical precision. Ultramicrosc. 30:429-434.Thomas, I. M. (1995) A cross-correlation method for merging electron crystallographic image data. J. Micros.Soc. Am. 1:167-173.Correlation Averaging – Technical (Particle Picking)Frank, J. and T. Wagenknecht (1984) Automatic selection of molecular images from electron micrographs.Ultramicrosc. 12:169-176.Olson, N. H. and T. S. Baker (1989) Magnification calibration and the determination of spherical virusdiameters using cryo-microscopy. Ultramicroscopy 30:281-297.Thuman-Commike, P. A. and W. Chiu (1996) PTOOL: A software package for the selection of particles fromelectron cryomicroscopy spot-scan images. J. Struc. Biol. 116:41-47.Correlation Averaging – Results (2D Crystals)Crepeau, R. H. and E. K. Fram (1981) Reconstruction of imperfectly ordered zinc-tubulin sheets using crosscorrelationand real space averaging. Ultramicrosc. 6:7-18.•Saxton, W. O. and W. Baumeister (1982) The correlation averaging of a regularly arranged bacterial cellenvelope protein. J. Microsc. 127:127-138.Stewart, M. and R. G. E. Murray (1982) Structure of the regular surface layer of Aquaspirillum serpens MW5.J. Bact. 150:348-357.Saxton, W. O., W. Baumeister and M. Hahn (1984) Three-dimensional reconstruction of imperfect twodimensionalcrystals. Ultramicrosc. 13:57-70.50