sildes - salsahpc

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Acknowledgements32Grant support NSF: under DBI: 0969929 (EK) and 0910818 (GF) NIH: 5 RC2 HG 005806- 02 (GF); NIGMS grantR01 GM-076680-04 (EK); NIDDK grants U01-DK-089571 and U01-DK-072473 (EK)Visualizing PSUECMLS 2012
25Thank you for your attentionVisualizing PSUECMLS 2012
Page 1 and 2: VISUALIZING THE PROTEINSEQUENCE UNI
Page 3 and 4: Grand Challenge of Functional Genom
Page 5 and 6: COG: Clusters of Orthologous Groups
Page 7 and 8: Clustering 10 million UniRef1007Use
Page 9 and 10: Public Resources9 Struggle to cope
Page 11 and 12: Multi-Dimensional Scaling (MDS)11Sa
Page 13 and 14: MDS Details13 f chosen heuristicall
Page 15 and 16: 3D View of 100K COG Sequences15Visu
Page 17 and 18: Cluster Annotation17COG Annotation
Page 19 and 20: Dendrogram of Cluster Centroids19Vi
Page 21 and 22: Heatmap for Selected Clusters21Visu
Page 23 and 24: Blast 623Visualizing PSUECMLS 2012
Page 25 and 26: 25ClusterDataBlast 6Originalrun has
Page 27 and 28: OctTree for 100Ksample of Fungi27We
Page 29 and 30: Conclusions29Data → Knowledge: pr
Page 31: References and Resources31COG data

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