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2022 Annual Report

This is the 2022 Annual Report for Van Andel Institute.

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Department of Structural Biology<br />

Scientists in the Institute’s Department of Structural<br />

Biology aim to understand the most basic building<br />

blocks of biology to inform our understanding of<br />

health and disease, and to aid in the development of<br />

new, improved medications for an array of disorders.<br />

Studying the foundations of life: Our scientists are<br />

investigating the mechanisms that allow our DNA to<br />

replicate, as well as the molecules at the core of some of<br />

our most vital systems, such as temperature regulation,<br />

communication between cells, and energy production<br />

and regulation.<br />

Turning weaknesses into strengths: Our scientists<br />

are investigating molecular vulnerabilities in bacteria,<br />

such as those that cause tuberculosis and urinary tract<br />

infections, and in diseases, such as cancer, to find ways<br />

to leverage these weaknesses for treatment.<br />

Aiding drug discovery: By better understanding<br />

molecular structure and function, our scientists could<br />

aid in the development of more targeted medications<br />

with fewer side effects.<br />

<strong>2022</strong> HIGHLIGHTS<br />

Study reveals insights into enzyme that combats common greenhouse gas<br />

An enzyme that combats the greenhouse gas nitrous oxide (N 2<br />

O) may one day give scientists a potent new tool for<br />

reducing the amount of the gas in the atmosphere thanks in part to findings published in Nature. The study details<br />

how the enzyme — N 2<br />

O reductase — is assembled and offers key insights into its ability to render nitrous oxide<br />

into harmless nitrogen and water. The research was co-led by VAI's Dr. Juan Du and Dr. Wei Lü, and University of<br />

Freiburg's Dr. Oliver Einsle. 1<br />

Molecular ‘blueprint’ illuminates how plants perceive light<br />

Plants rely on their ability to sense light for survival. But unlike animals, plants don’t have eyes full of photoreceptors<br />

to capture and convey messages from visual stimuli. Instead, plants are coated with a network of light-sensing<br />

photoreceptors that detect different wavelengths of light, allowing them to regulate their lifecycles and adjust to<br />

environmental conditions. Now, VAI and Washington University scientists have determined the molecular structure<br />

of one of these vital photoreceptors — a protein known as PhyB — revealing a wholly different structure than<br />

previously known. The findings, published in Nature by VAI’s Dr. Huilin Li and Washington University’s<br />

Dr. Rick Vierstra, may have implications for agricultural and “green” bioengineering practices. 2<br />

VAI marks five years of discovery with cryo-EM<br />

To understand life’s building blocks — the molecules that give structure to our cells, fuel our bodies and play integral<br />

roles in health and disease — we need powerful technology that allows us to see them in deep detail.<br />

That’s where cryo-EM comes in. Short for cryo-electron microscopy, cryo-EM is a special type of technique and<br />

equipment that helps scientists zoom in on molecules in their natural state. The insights gleaned from these images<br />

tell us how molecules work, how they interact with other molecules and how they might be leveraged to design new<br />

treatments for disease.<br />

Five years ago, VAI established the David Van Andel Advanced Cryo-Electron Microscopy Suite. It includes three stateof-the-art<br />

microscopes, two of which are cryo-EM. Since then, our scientists have made many important discoveries<br />

that are reshaping our understanding of health and disease, such as new insights into how our DNA repairs itself, how<br />

our cells communicate and sense their environment, and how potential targets for new medications work.<br />

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