22.01.2013 Views

A Critique of Pure (Genetic) Information

A Critique of Pure (Genetic) Information

A Critique of Pure (Genetic) Information

SHOW MORE
SHOW LESS

Create successful ePaper yourself

Turn your PDF publications into a flip-book with our unique Google optimized e-Paper software.

88 Chapter 3<br />

little by way <strong>of</strong> explanation. Highly ordered and specific patterns <strong>of</strong><br />

organization, as we’ve seen with respect to the radial or concentric<br />

pattern <strong>of</strong> compartmentalization in the cell, do pose explanatory challenges<br />

with respect to the preservation <strong>of</strong> information. We will now<br />

consider evidence as to whether the movement <strong>of</strong> proteins in the plane<br />

<strong>of</strong> the plasma membrane—and thus largely orthogonal to the direction<br />

<strong>of</strong> the differentiation <strong>of</strong> the membranous strata—also poses such a<br />

challenge.<br />

The principal technique that has been used for examining the lateral<br />

movement <strong>of</strong> membrane-embedded constituents has been fluorescence<br />

recovery after photobleaching (FRAP). In this method, cell-surface components<br />

are labeled with a fluorescent dye. A laser is focused on a small<br />

(1 to 10mm 2 ) area on the surface <strong>of</strong> the labeled cell. Fluorescence in this<br />

area is monitored by a photomultiplier. By momentarily increasing the<br />

intensity <strong>of</strong> the laser by 10 3 to 10 5 -fold the fluorophores in the region<br />

can be photochemically bleached. The laser is then attenuated and<br />

fluorescence once again measured. The time it takes for full recovery <strong>of</strong><br />

fluorescence (due to the diffusional replacement <strong>of</strong> the bleached fluorophores)<br />

is used to calculate the D L <strong>of</strong> the membrane-embedded cell<br />

surface components. The level <strong>of</strong> fluorescence immediately after bleaching<br />

is designated f 0. The complete or highest fluorescent level is designated<br />

f µ.". From the times it takes to recover maximum fluorescent<br />

recovery is derived the t 1/2, or half-recovery time. The diffusion coefficient,<br />

DL, is then given by the equation D L = (w 2 /4t 1/2) g, where n is the<br />

radius <strong>of</strong> the beam, t 1/2 the half-recovery time, and g a parameter which<br />

accounts for the degree <strong>of</strong> bleaching and beam pr<strong>of</strong>ile. Under typical conditions<br />

g=1.3 (Cherry 1979).<br />

Simple-model membranes can be constructed in the laboratory in<br />

which nothing is present above or below the plane <strong>of</strong> the membrane.<br />

Various proteins can be incorporated into these model membranes and<br />

the lipid composition can be altered in order to evaluate the influence <strong>of</strong><br />

lipid composition on diffusional coefficients. The model membranes provided<br />

a good opportunity to test the predictions <strong>of</strong> the Saffman-Delbrück<br />

equation. In a number <strong>of</strong> FRAP studies using different lipid compositions<br />

and different proteins, D L’s were found to be in the 10 -7 to 10 -8<br />

range, which is in fairly good accordance with the Saffman-Delbrück

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!