Evolucao Molecular.pdf - Instituto de Biologia da UFRJ
Evolucao Molecular.pdf - Instituto de Biologia da UFRJ
Evolucao Molecular.pdf - Instituto de Biologia da UFRJ
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Parâmetros do alinhamento<br />
múltiplo<br />
• GAPOPEN (<strong>de</strong>fault 10),<br />
• GAPEND,<br />
• GAPEXT (0,05),<br />
• GAPDIST (8)<br />
• Matrizes<br />
Blosum* – muitos <strong>da</strong>dos sem in<strong>de</strong>l;<br />
PAM – poucos <strong>da</strong>dos com in<strong>de</strong>ls;<br />
Gonnet – muitos <strong>da</strong>dos com in<strong>de</strong>ls;<br />
id – idêntico = 10 e diferente = 0