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Atomic Force Microscopy in Cancer Cell Research - Clarkson ...

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2 <strong>Atomic</strong> <strong>Force</strong> <strong>Microscopy</strong> <strong>in</strong> <strong>Cancer</strong> <strong>Cell</strong> <strong>Research</strong><br />

present state of research <strong>in</strong> this area. There are many different<br />

<strong>in</strong>terest<strong>in</strong>g results but without a unify<strong>in</strong>g protocol. One<br />

of the purposes of this review is to help develop such a<br />

protocol.<br />

1.1. Pr<strong>in</strong>ciples of AFM<br />

AFM is a relatively novel method. It was <strong>in</strong>vented <strong>in</strong> 1986<br />

as the first new extension of scann<strong>in</strong>g probe microscopy<br />

(which first appeared <strong>in</strong> 1981 <strong>in</strong> the guise of scann<strong>in</strong>g tunnel<strong>in</strong>g<br />

microscopy) [50]. Its technique is based on detection<br />

of forces act<strong>in</strong>g between a sharp probe, known as AFM tip,<br />

and the sample’s surface (Fig. 1). The tip is attached to<br />

a very flexible cantilever. Any motion of the cantilever is<br />

detected by various methods. The most popular is an optical<br />

system of detection. Laser light is reflected from the cantilever<br />

and detected by a photodiode. The tip is brought to<br />

contact or near-contact with the surface of <strong>in</strong>terest. Scann<strong>in</strong>g<br />

over the surface, AFM system records the deflection of<br />

the cantilever, due to very small forces between the atoms<br />

of the probe and the surface, with sub-nanometer precision.<br />

In pr<strong>in</strong>ciple, the whole system may look like just an oldfashioned<br />

stylus profilometer. Indeed, the only difference is<br />

the presence <strong>in</strong> AFM of a very sensitive detection system,<br />

microscopically sharp tips, and extremely high-precision tipsample<br />

position<strong>in</strong>g. The deflection signal (or any derivations<br />

of the deflection) is recorded digitally, and can be visualized<br />

on a computer <strong>in</strong> real-time.<br />

The AFM technique is much more than just simply<br />

microscopy. One can th<strong>in</strong>k about AFM tip as a microscopic<br />

“f<strong>in</strong>ger” with a nanosize apex. Follow<strong>in</strong>g this analogy, one<br />

can use such a f<strong>in</strong>ger to touch the surface to feel how rigid<br />

it is (rigidity force microscope or nano<strong>in</strong>denter); one can<br />

feel how sticky a surface is (chemical force microscopy);<br />

one can put some “goo” on the top of the tip, and consequently,<br />

detect how sticky the “goo” is with respect to the<br />

surface (functionalized tip imag<strong>in</strong>g); and so on. In essence,<br />

one can do with AFM correspond<strong>in</strong>gly what can be done<br />

with “a learn<strong>in</strong>g f<strong>in</strong>ger.” Depend<strong>in</strong>g on the sample and on<br />

<strong>in</strong>formation that one wishes to get, one can choose many<br />

different modes of operation of AFM.<br />

Laser source<br />

Photo detector<br />

sample surface<br />

Scann<strong>in</strong>g<br />

Figure 1. A schematic view of the AFM method.<br />

AFM cantilever<br />

1.2. Modes of AFM Operation<br />

Here we briefly describe a few basic modes which one can<br />

operate an AFM <strong>in</strong>:contact, tapp<strong>in</strong>g, and force mode. There<br />

are a few other modes of operation, which are not that popular<br />

as yet, and will not be described here. An advanced,<br />

so-called force-volume mode, which is rather useful for the<br />

study cell mechanics, will also be presented. All modes work<br />

<strong>in</strong> ambient conditions, as well as <strong>in</strong> liquids, <strong>in</strong>clud<strong>in</strong>g biological<br />

buffers. Comparative advantages and disadvantages of<br />

these modes are also described below.<br />

1.2.1. Contact Mode<br />

In contact mode, AFM tip is <strong>in</strong> actual contact with the sample’s<br />

surface. In pr<strong>in</strong>ciple, AFM <strong>in</strong> this mode can work precisely<br />

as described above. However, if there is a bump on<br />

the surface, the cantilever will be deflected more, and consequently,<br />

AFM tip scans over the surface with more force.<br />

This can result <strong>in</strong> scratch<strong>in</strong>g the sample surface. Moreover,<br />

if the sample surface has a trench, the cantilever may<br />

simply “fly over” without touch<strong>in</strong>g it. Both cases are not<br />

good. To exclude these bad behaviors of the cantilever, a<br />

positive-feedback system was <strong>in</strong>troduced. This works as follows.<br />

When the tip comes across a bump on the surface,<br />

the deflection of the cantilever <strong>in</strong>creases, and the feedback<br />

system elevates the whole cantilever holder so that the cantilever’s<br />

deflection is adjusted back to its orig<strong>in</strong>al value, and<br />

the cantilever is returned to its orig<strong>in</strong>al position. In the case<br />

of a trench, the same feedback system moves the cantilever<br />

down to aga<strong>in</strong>, ma<strong>in</strong>ta<strong>in</strong> the same deflection. This provides<br />

the same so-called “load force” between the tip and the<br />

sample.<br />

Pros of contact mode:<br />

• This is the simplest mode of operation. It requires m<strong>in</strong>imum<br />

operational skill and only basic hardware.<br />

• Allows very fast scann<strong>in</strong>g (typically 0.1–0.5 second per<br />

scan l<strong>in</strong>e).<br />

• The load force can be precisely controlled.<br />

• Good signal-to-noise ratio even <strong>in</strong> a noisy environment.<br />

• Generally cheaper and more robust cantilevers can be<br />

used.<br />

Cons of contact mode:<br />

• The tip can stretch or even scratch the surface. This<br />

will lead to artifacts, therefore disrupt<strong>in</strong>g the sample<br />

and lead<strong>in</strong>g to images and measurements that are not<br />

representational of the orig<strong>in</strong>al sample.<br />

• The tip can remove poorly attached parts of the sample.<br />

Apart from just damag<strong>in</strong>g the surface, this can contam<strong>in</strong>ate<br />

the tip surface and prevent it from be<strong>in</strong>g used any<br />

further.<br />

• Can provide only limited <strong>in</strong>formation about the surface<br />

(compar<strong>in</strong>g to other modes).<br />

Because of its simplicity, contact mode is one of the most<br />

popular modes. Contact mode is typically the best on solid<br />

and well-fixed surfaces. It normally requires rather soft cantilevers<br />

(spr<strong>in</strong>g constant (a characteristic measure) <strong>in</strong> the<br />

range of 0.001–1 Nm −1 ).

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