Inoculum 63(3) - Mycological Society of America
Inoculum 63(3) - Mycological Society of America
Inoculum 63(3) - Mycological Society of America
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ular soil horizons, the isotopic composition <strong>of</strong> macr<strong>of</strong>ungal fruiting bodies might<br />
be a useful tool for tracing lead origin. Our preliminary data from a case study in<br />
Agaricus bernardii have supported this hypothesis. Furthermore, the isotopic<br />
composition <strong>of</strong> lead in saprotrophic macr<strong>of</strong>ungi (Agaricus campestris, A.<br />
bernardii, A. xanthodermus and Leucoagaricus leucothites) <strong>of</strong> various origins has<br />
reflected more or less the expected pollution sources.<br />
Brewer, Marin T and Ashley N Turner. Department <strong>of</strong> Plant Pathology, University<br />
<strong>of</strong> Georgia, Athens, GA 30602. Genetic diversity and reproductive isolation<br />
in Didymella bryoniae, a fungal pathogen <strong>of</strong> cucurbits<br />
We are interested in determining the center <strong>of</strong> diversity, as well as historical<br />
and ongoing migration patterns in the cucurbit pathogen Didymella bryoniae.<br />
This fungus causes gummy stem blight and black rot <strong>of</strong> cucurbits everywhere they<br />
are grown, yet relatively little is known about how it is dispersed. Previous studies<br />
with dominant markers have indicated that this species is diverse and contains<br />
at least two distinct genetic groups. We sequenced four nuclear regions, including<br />
calmodulin (CAL), beta-tubulin (TUB2), chitin synthase 1 (CHS-1), and the internal<br />
transcribed spacer <strong>of</strong> the rDNA (ITS) <strong>of</strong> thirty-four isolates from diverse cucurbit<br />
hosts across the United States (US). Isolates from both genetic groups were<br />
represented in our sample. A total <strong>of</strong> 1415 bp were sequenced, resulting in 41<br />
polymorphic sites and 13 unique haplotypes. A haplotype network constructed<br />
with TCS demonstrated that there are two distinct genetic groups, which is consistent<br />
with previous studies. However, a single isolate collected from a greenhouse<br />
in California was quite distinct from both groups. There is no association<br />
with genetic group and host species <strong>of</strong> origin, which is not surprising because earlier<br />
studies indicated that host specialization is not evident with D. bryoniae. Geographic<br />
associations were detected, however, as one <strong>of</strong> the groups was present<br />
only in the northeastern US whereas the other group was found throughout the<br />
US. There are no detectable morphological differences between the two genetic<br />
groups indicating that these groups represent cryptic species that are reproductively<br />
isolated. Studies on a worldwide collection <strong>of</strong> isolates are currently underway.<br />
Coalescent analyses on this collection will be aimed at understanding migration<br />
patterns, geographic origin, and approximate age <strong>of</strong> the divergence <strong>of</strong> the<br />
genetic groups to elucidate the evolutionary processes contributing to the observed<br />
patterns <strong>of</strong> diversity.<br />
Broders, Kirk 1 , Andre Boraks 1 , Laura Barbison 2 , John Brown 2 , and Greg<br />
Boland 2 . 1 Department <strong>of</strong> Biological Sciences, University <strong>of</strong> New Hampshire,<br />
Durham, NH 03824, 2 School <strong>of</strong> Environmental Sciences, University <strong>of</strong> Guelph,<br />
Guelph, ON N1G 2W1. Invasion biology <strong>of</strong> the butternut canker fungus<br />
Ophiognomonia clavigignenti-juglandacearum<br />
Butternut canker caused by the fungal pathogen Ophiognomonia<br />
clavigignenti-juglandacearum (Oc-j) remains the primary cause for range-wide<br />
mortality <strong>of</strong> butternut trees. The disease was first reported in Wisconsin in 1967,<br />
however the fungus may have been present for several years prior. Several questions<br />
still remain largely unanswered regarding the invasion by Oc-j. These questions<br />
include; how many times was the fungus introduced; where was it introduced;<br />
were more virulent strains introduced; and how was it able to spread so<br />
rapidly within the native butternut population. Therefore, our objective was to<br />
evaluate the invasion biology <strong>of</strong> this fungus including investigations into the ecology,<br />
epidemiology, and population structure <strong>of</strong> Oc-j in North <strong>America</strong>. To complete<br />
these objective flowers, developing seeds, and mature seeds <strong>of</strong> butternut,<br />
heartnut and black walnut were assessed as potential vectors <strong>of</strong> Oc-j; Sixteen isolates<br />
were evaluated for virulence on butternut, heartnut, and black walnut; and<br />
100 isolates <strong>of</strong> Oc-j from across North <strong>America</strong> were used to analyze the population<br />
structure <strong>of</strong> the fungus. Bayesian analyses based on 16 SNP markers revealed<br />
that the Oc-j population in North <strong>America</strong>n is composed <strong>of</strong> four genetically distinct<br />
clonal lineages, suggesting multiple introductions <strong>of</strong> Oc-j, through successive<br />
or simultaneous introductions <strong>of</strong> isolates having differentiated genetic backgrounds.<br />
Isolates <strong>of</strong> Oc-j recovered from heartnut and black walnut caused larger<br />
lesions on all three Juglans species compared to isolates originally recovered from<br />
butternut. Four <strong>of</strong> the five isolates, which caused the largest lesions on butternut<br />
belonged to a single genetic cluster. The pathogenicity data in combination with<br />
geographic and population structure data indicate this fungus was introduced into<br />
North <strong>America</strong> on multiple occasions, and a more virulent clonal lineage was recently<br />
introduced into Minnesota and Wisconsin and subsequently spread<br />
throughout the rest <strong>of</strong> the butternut canker population in North <strong>America</strong>.<br />
Buchanan, Peter K and Peter R Johnston. Landcare Research, Private Bag<br />
92170, Auckland 1142, New Zealand. Conservation <strong>of</strong> Fungi - threat status <strong>of</strong><br />
fungi in New Zealand and globally<br />
Fungi have been included in threat status assessments <strong>of</strong> New Zealand’s<br />
biota since 2002. Assessments have mainly addressed macr<strong>of</strong>ungi, as well as obligate<br />
species <strong>of</strong> fungi on threatened plants. The initial inclusion <strong>of</strong> fungi, and subsequent<br />
need for reassessment <strong>of</strong> threat status, has generated new research initiatives<br />
and raised awareness <strong>of</strong> fungal conservation. Aspects <strong>of</strong> fungal biology such<br />
12 <strong>Inoculum</strong> <strong>63</strong>(3), June 2012<br />
as ephemeral reproductive stages add difficulty to threat status assessments. Examples<br />
are presented <strong>of</strong> fungal species listed in the highest (Nationally Critical)<br />
and other threat categories. Over 1,000 species <strong>of</strong> fungi are listed as Data Deficient<br />
due to inadequate distribution data. Fungi have been included in a prioritization<br />
exercise spanning all New Zealand’s threatened taxa that are in decline, to<br />
evaluate methodology, feasibility, and cost <strong>of</strong> long-term recovery plans. Using<br />
molecular techniques, new records <strong>of</strong> ectomycorrhizal fungi listed as Data Deficient<br />
have been discovered by comparing environmental sampling <strong>of</strong> ectomycorrhizas<br />
with DNA sourced from herbarium specimens. Responding to increasing<br />
global awareness <strong>of</strong> the need for fungal conservation, the International <strong>Society</strong> for<br />
Conservation <strong>of</strong> Fungi was formed in 2010, and five Fungal Specialist Groups<br />
have been established under IUCN.<br />
Burchhardt, Kathleen M and Marc A Cubeta. North Carolina State University,<br />
Department <strong>of</strong> Plant Pathology, Raleigh, NC 27695. Population dynamics <strong>of</strong><br />
Monilinia vaccinii-corymbosi in blueberry fields throughout the United<br />
States<br />
Mummy berry disease <strong>of</strong> blueberry (Vaccinium spp.) is caused by the ascomycete<br />
Monilinia vaccinii-corymbosi (Mvc). The fungus produces asexual and<br />
sexual spores that infect blueberry shoots and fruit. While spore dispersal and sexual<br />
reproduction can contribute to the spread and evolution <strong>of</strong> fungal populations,<br />
little is known about the population dynamics <strong>of</strong> Mvc. The primary objective <strong>of</strong><br />
this study was to utilize microsatellite-based genetic markers to examine intraspecific<br />
genetic diversity, population structure, and gene flow among populations<br />
<strong>of</strong> Mvc throughout blueberry growing regions <strong>of</strong> the United States. In this<br />
study, 438 isolates <strong>of</strong> Mvc sampled from 15 blueberry fields in New York, New<br />
Jersey, Massachusetts, Georgia, Mississippi, Oregon, Washington, Michigan, and<br />
North Carolina were screened with 10 polymorphic microsatellite markers. Results<br />
based on analyzing a geographically diverse subsample <strong>of</strong> 55 isolates from<br />
six fields indicate high intraspecific genetic diversity. Forty-eight private alleles<br />
were detected across the 10 loci, providing evidence for population differentiation<br />
and restricted gene flow among fields. Results from population genetic analyses<br />
<strong>of</strong> a more comprehensive dataset <strong>of</strong> 438 isolates will be presented.<br />
Burleigh, J Gordon 1 , Keith Crandall 2 , Karen Cranston 3 , Karl Gude 4 , David S<br />
Hibbett 5 , Mark Holder 6 , Laura A Katz 7 , Richard H Ree 7 , Stephen A Smith 7 ,<br />
Douglas E Soltis 7 , and Tiffani Williams 7 . 1 Department <strong>of</strong> Biology, University <strong>of</strong><br />
Florida, Gainesville, FL 32611, 2 Department <strong>of</strong> Biology, Brigham Young University,<br />
Provo, UT 84602, 3 NESCENT, Durham, NC 27705, 4 College <strong>of</strong> Communication,<br />
5<br />
Arts and Sciences, Michigan State University, E. Lansing<br />
6<br />
MI 45622,<br />
Biology Department, Clark University, Worcester MA 01610, Department <strong>of</strong><br />
Ecology<br />
7<br />
and Evolutionary Biology, University <strong>of</strong> Kansas, Lawrence KS 66045,<br />
and elsewhere. Open Tree <strong>of</strong> Life: Community driven synthesis <strong>of</strong> the Tree<br />
<strong>of</strong> Life<br />
Reconstructing the phylogeny <strong>of</strong> all species has been a grand challenge<br />
ever since Darwin. The scope <strong>of</strong> the problem is immense: current estimates <strong>of</strong> extant<br />
biodiversity range from 1.8 million to 8.7 million species, a large fraction <strong>of</strong><br />
which are Fungi. Much progress has recently been made in resolving the tree, and<br />
systematists continue to generate new phylogenetic knowledge at all depths <strong>of</strong> ancestry.<br />
Nevertheless, despite 150 years <strong>of</strong> effort, 55 AToL projects, and numerous<br />
other funded projects, we lack a comprehensive tree <strong>of</strong> life. Synthesis is currently<br />
inhibited by limits <strong>of</strong> available data, analytical power, and informatics infrastructure.<br />
Perhaps more importantly, it is also limited by a lack <strong>of</strong> compelling<br />
means and incentives for community participation. A comprehensive synthesis<br />
would yield great benefits across the life sciences, especially if it were self-sustaining,<br />
community-driven, and continually updated. We describe a recently funded<br />
project named “Open Tree <strong>of</strong> Life” that aims to establish a community-driven,<br />
continually updated estimate <strong>of</strong> the entire tree, and develop new s<strong>of</strong>tware tools<br />
and new methods for merging and sharing data. Open Tree <strong>of</strong> Life will: 1) within<br />
one year, compile the first comprehensive draft tree <strong>of</strong> life by synthesizing existing<br />
phylogenetic and taxonomic knowledge; 2) enable the community to improve,<br />
annotate, and expand this initial tree; 3) initiate a cultural transformation in<br />
systematics towards pervasive and ingrained practices <strong>of</strong> data sharing; and 4) develop<br />
novel methods for synthetic tree reconstruction. By engaging the systematics<br />
community, including mycologists, our overarching goal is to cultivate ongoing<br />
synthesis on a large scale, in a manner that will transform current cultural<br />
norms in the field.<br />
Bushley, Kathryn E and Joseph W Spatafora. Department <strong>of</strong> Botany and Plant<br />
Pathology, Oregon State University, Corvallis, OR 97330. Convergent and divergent<br />
evolution <strong>of</strong> nonribosomal peptide synthetases<br />
Nonribosomal peptide synthetases (NRPSs) are large multimodular enzymes<br />
which produce small bioactive peptides (NRPs) without the aid <strong>of</strong> ribosomes.<br />
While the function <strong>of</strong> many NRPs remains unknown, it is becoming clear<br />
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