CPGR Workshop â Tutorials Tutorial 1 â Evaluating loci to be ...
CPGR Workshop â Tutorials Tutorial 1 â Evaluating loci to be ...
CPGR Workshop â Tutorials Tutorial 1 â Evaluating loci to be ...
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12. Now we have <strong>to</strong> choose the correct BLAST program. We will discuss this in<br />
more detail <strong>to</strong>morrow. For now choose blastn, which searches a nucleotide<br />
sequence against a nucleotide database of sequences.<br />
13. Set the expect threshold <strong>to</strong> 1e-5. In this case, I also set the max target<br />
sequences <strong>to</strong> display at 10 <strong>to</strong> prevent a large amount of data coming back from<br />
the BLAST server.