AFNI Jewel Box AKA Tool Box, Treasure Chest or Miscellaneous Tools

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-8-Image Filters• Smoothing and filtering datasetso 3dmerge Various spatial filters, thresholds, clustering and averaging3dmerge -1filter_aver 8 -prefix funcFaver8 funcslim+orig3danisosmooth Anisotropical smoothing (preserves edges)3danisosmooth -iters 4 -matchorig -3D -prefix anat_as -vieweranat+orig3dWinsor Nonlinear order statistics filter for spatial smoothing3dUniformize Correct for image intensity non-uniformity in anatomical datasetsOriginal 3dmerge -1filter_aver 8 3dmerge -1blur_fwhm 8
-9-Spatial sharpeningfilter optionsOriginal Image3danisosmoothWinsor-9 filterSharpen-4 filterDisplay options
Page 1 and 2: -1-AFNI Jewel BoxAKA Tool Box, Trea
Page 3 and 4: -3-• Auxiliary Programs for Datas
Page 5 and 6: -5-o 3dcalc Voxel-by-voxel general
Page 7: -7-Simple statistics on datasetso 3
Page 11 and 12: -11-3D+time Pre-Processing Programs
Page 13 and 14: -13-• Dataset Histogram Programs
Page 15 and 16: -15-ROI Generation and Usage Progra
Page 17 and 18: -17-Dataset File Utilities• 3dinf
Page 19 and 20: -19-• Programs for Changing Datas
Page 21 and 22: -21-Volume Segmentation Tools3dIntr
Page 23 and 24: -23-Spatial Utilities• 3dclust --
Page 25 and 26: -25-• Image Registration Programs
Page 27 and 28: -27-Group Dataset Statistical Analy
Page 29 and 30: -29-Scripts@SUMA_Make_Spec_FS - con
Page 31 and 32: -31-Scripts (continued)@Center_Dist
Page 33 and 34: -33-GyrusFinderSemi-automatic white
Page 35 and 36: -35-Environment Variables and .afni
Page 37 and 38: -37-AFNI GUI Plugouts and command l
Page 39: -39-ACE ExamExamination to become a

AFNI Jewel Box AKA Tool Box, Treasure Chest or Miscellaneous Tools

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