Research Report 2003 - Max-Planck-Institut für molekulare Genetik

Department of Vertebrate Genomics
34
General information
Publications 1998-2003
Malecova B, Ramser J, O’Brien JK, Janitz
M, Judova J, Lehrach H & Simuth J (2003).
Honeybee (Apis mellifera L.) mrjp gene family:
computational analysis of putative promoters
and genomic structure of mrjp1, the gene
coding for the most abundant protein of larval
food. Gene 303:165-75
Vanhecke D, Fiebitz A, Wagner F, Girnus I,
Scholz-Neumann N, Lehrach H & Janitz M
(2003). A high throughput mammalian two
hybrid system for the detection of T helper specific
signal transduction molecules. Clin
Immunol Suppl 1: S144
Bauer O, Janitz M, Guerasimova A, Herwig
R, Lehrach H & Radelof U (2002). OFP - Oligonucleotide
fingerprinting. In Analysing Gene
Expression. A Handbook of Methods: Possibilities
and Pitfalls. Lorkowski S & Cullen P
eds., Wiley-VCH, Weinheim, pp. 463-471
Guerasimova A, Nyarsik L, Girnus I,
Steinfath M, Wruck W, Griffiths H, Herwig
R, Wierling C, O’Brien J, Eickhoff H, Lehrach
H & Radelof U (2001). New tools for oligonucleotide
fingerprinting. Biotechniques
31(3):490-5
Janitz M, Reiners-Schramm L, Muhlethaler-
Mottet A, Rosowski M & Lauster R (2001).
Analysis of the sequence polymorphism within
class II transactivator gene promoters. Exp
Clin Immunogenet 18:199-205
Guerasimova A, Ivanov I & Lehrach H
(1999). A method of one-step enzyme labelling
of short oligonucleotide probes for filter
hybridisation. Nucleic Acids Res 27(2):703-5
Janitz M, Reiners-Schramm L & Lauster R
(1998). Expression of the H2-Ea gene is modulated
by a polymorphic transcriptional enhancer.
Immunogenetics 48(4):266-72
Cowell LG, Kepler TB, Janitz M, Lauster R
& Mitchison NA (1998). The distribution of
variation in regulatory gene segments, as
present in MHC class II promoters. Genome
Res 8(2):124-34
Janitz M, Heiser V, Bottcher U, Landt O &
Lauster R (1998). Three alternatively spliced
variants of the gene coding for the human bone
morphogenetic protein-1. J Mol Med 76(2):
141-6
Theses
A. Guerasimova: Novel experimental approaches
to DNA characterisation by Oligonucleotide
Fingerprinting: Application of Peptide
Nucleic Acids. PhD Thesis, Free University
of Berlin, 2000
J. Illiger: Analyse der Genexpression von
humanen T-Lymphocyten und Natural Killer-
Zellen mittels Oligonucleotid Fingerprinting.
PhD Thesis, Free University of Berlin, 2002
O. Bauer: Multiplexed hybridizations of positively
charge-tagged PNA detected by MALDI-
TOF mass spectrometry. PhD Thesis, Free
University of Berlin, 2003
O. Bauer: Funktionelle Analyse differentiell
exprimierter Gene in der Embryonalentwicklung
von Danio Rerio. Diploma Thesis, Free
University of Berlin, 2000
External funding
BMBF / NGFN: Berlinflame – functional
genomics of inflammatory chronic diseases.
Subproject 4 in the frame of Infection and
Inflammation Network of NGFN (BMBF). 1
postdoc position funded, 2001 - 2004
DHGP: Oligonucleotide fingerprinting by multiplex
PNA hybridization and MALDI mass
spectrometry detection. 1999 – 2004
DHGP: Gene expression profiling in murine
T cells for identification and functional analysis
of T cell gene regulatory networks that are
implicated in autoimmune diseases. 1999 -
2004
KWS: Establishment of the unigen sets for
cDNA libraries derived from different organs
of sugar beet. 1999 - 2002
EU FP5: Establishing the resources for the examination
of gene expression in cattle. 1999-
2003
EU FP5: Structural and functional genomics
tools for cattle research. 2003-2005
EU FP6: Advanced molecular tools for arraybased
analyses of genomes, transcriptomes,
proteomes, and cells. 2004 - 2006
BMBF: Transfected-cell array-a high throughput
tool for gene functional studies in mammalian
cells as alternative to knockout and
transgenic mouse studies. 2004 – 2007