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Constructing a profile<br />
Take significant BLAST results<br />
Make an alignment<br />
Assign weights to sequences<br />
Construct the profile<br />
A<br />
C<br />
D<br />
.<br />
.<br />
.<br />
W<br />
Y<br />
0.5<br />
0<br />
0<br />
.<br />
.<br />
.<br />
0<br />
0.5<br />
0.3<br />
0.1<br />
0<br />
.<br />
.<br />
.<br />
0.3<br />
0.3<br />
0.2<br />
0.0<br />
0.1<br />
.<br />
.<br />
.<br />
0.4<br />
0.3<br />
...<br />
...<br />
...<br />
...<br />
...<br />
...<br />
...<br />
...<br />
0<br />
0.5<br />
0.2<br />
.<br />
.<br />
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0.1<br />
0.2
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