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src (dom. neg.) in pUSE amp, cDNA (K296R/Y528F) - Millipore

src (dom. neg.) in pUSE amp, cDNA (K296R/Y528F) - Millipore

src (dom. neg.) in pUSE amp, cDNA (K296R/Y528F) - Millipore

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<strong>src</strong> (<strong>dom</strong>. <strong>neg</strong>.) <strong>in</strong> <strong>pUSE</strong> <strong>amp</strong>, <strong>cDNA</strong><br />

(<strong>K296R</strong>/<strong>Y528F</strong>)<br />

7.45 kb<br />

Catalog # 21-154<br />

Lot # 17759<br />

Product Description: Transfection grade eukaryotic<br />

expression vector conta<strong>in</strong><strong>in</strong>g mouse <strong>src</strong> (<strong>dom</strong>. <strong>neg</strong>.)<br />

under the control of the CMV promoter as illustrated.<br />

The <strong>cDNA</strong> was <strong>in</strong>serted as an H<strong>in</strong>d III fragment <strong>in</strong>to<br />

the H<strong>in</strong>d III site of <strong>pUSE</strong><strong>amp</strong>(+) multiple clon<strong>in</strong>g site<br />

(Catalog # 21-147).<br />

The <strong>dom</strong><strong>in</strong>ant <strong>neg</strong>ative <strong>src</strong> <strong>cDNA</strong> was derived from<br />

the neuronal form of c-<strong>src</strong> subjected to site directed<br />

mutagenesis to delete neuronal specific sequences.<br />

The <strong>cDNA</strong> conta<strong>in</strong>s two po<strong>in</strong>t mutations, the<br />

substitution of arg<strong>in</strong><strong>in</strong>e for lys<strong>in</strong>e at residue 296 and<br />

phenylalan<strong>in</strong>e for tyros<strong>in</strong>e at residue 528. NOTE:<br />

These residues correspond to K295 and Y527 <strong>in</strong> avian<br />

<strong>src</strong>.<br />

Formulation: 50mg aff<strong>in</strong>ity purified DNA eluted and<br />

packaged aseptically <strong>in</strong> 100ml 10mM Tris-HCl, pH 7.4,<br />

1mM EDTA. Frozen solution.<br />

Storage and Stability: Stable for 6 months at -20ºC<br />

from date of shipment.<br />

FOR RESEARCH USE ONLY<br />

NOT FOR USE IN HUMANS<br />

Quality Control Test<strong>in</strong>g<br />

Diagnostic DNA digest: This lot of DNA was cut with<br />

H<strong>in</strong>d III, which generated the expected fragments of<br />

approximately 1.9 and 5.5Kb.<br />

Purity: The OD260/OD280 for this lot of <strong>cDNA</strong> is 1.72.<br />

Expression <strong>in</strong> Transient Transfection Assay:<br />

Expression of <strong>src</strong> was detected by immunoblott<strong>in</strong>g of<br />

<strong>src</strong> (<strong>dom</strong>. <strong>neg</strong>.) <strong>in</strong> <strong>pUSE</strong><strong>amp</strong> transfected Cos-1 cells<br />

with 1μg/ml of anti-<strong>src</strong> (Catalog # 05-184).<br />

Immunoblot Analysis:<br />

RIPA lysates of transiently transfected Cos-<br />

1 cells were resolved by electrophoresis,<br />

transferred to nitrocellulose and probed with<br />

anti-<strong>src</strong> (Catalog #05-184, 1μg/ml).<br />

Prote<strong>in</strong>s were visualized us<strong>in</strong>g a goat antimouse<br />

secondary antibody conjugated to<br />

HRP and a chemilum<strong>in</strong>escence detection<br />

system. Lane 1, <strong>pUSE</strong> <strong>src</strong> (<strong>dom</strong>. <strong>neg</strong>.)<br />

transfected cells; Lane 2 untransfected<br />

control. Arrow <strong>in</strong>dicates <strong>src</strong>.<br />

Background: Src is the prototypical non-receptor prote<strong>in</strong> tyros<strong>in</strong>e k<strong>in</strong>ase whose activity is <strong>neg</strong>atively regulated by<br />

phosphorylation of a C-term<strong>in</strong>al tyros<strong>in</strong>e residue by the tyros<strong>in</strong>e k<strong>in</strong>ase Csk (C-term<strong>in</strong>al Src k<strong>in</strong>ase). Src is <strong>in</strong>volved <strong>in</strong><br />

multiple signal<strong>in</strong>g pathways, which <strong>in</strong>clude <strong>in</strong>tegr<strong>in</strong> mediated cell adhesion and growth factor <strong>in</strong>itiated cell proliferation.<br />

The substitution of arg<strong>in</strong><strong>in</strong>e for lys<strong>in</strong>e (residue 296) <strong>in</strong> the ATP b<strong>in</strong>d<strong>in</strong>g pocket of the tyros<strong>in</strong>e k<strong>in</strong>ase <strong>dom</strong>a<strong>in</strong> abolishes<br />

phosphotransferase activity. The phenylalan<strong>in</strong>e substitution for tyros<strong>in</strong>e (residue 528) abolishes phosphorylation and<br />

thereby prevents <strong>in</strong>tramolecular <strong>in</strong>teraction between the C-term<strong>in</strong>us and SH2 <strong>dom</strong>a<strong>in</strong> of Src. This k<strong>in</strong>ase <strong>in</strong>active <strong>src</strong><br />

mutant functions as a <strong>dom</strong><strong>in</strong>ant <strong>neg</strong>ative and renders the SH2 <strong>dom</strong>a<strong>in</strong>, and probably the SH3 <strong>dom</strong>a<strong>in</strong>, accessible to<br />

cellular b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong>s that normally contribute to activation of Src.


Page Two of Three<br />

Catalog # 21-154<br />

Lot 17759<br />

Application Reference:<br />

Mukhopadhyay, D., et al., Nature 375: 577-581, 1995.<br />

References:<br />

Zang, Q., et al., J. Biol. Chem. 272: 13275-13280, 1997.<br />

Brown, M.T., et al., Biochim. Biophys. Acta 1287: 121-149, 1996.<br />

Barone, M.V., et al., Nature 378: 509-512, 1996.<br />

Plasmid Information:<br />

Multiple Clon<strong>in</strong>g Site of <strong>pUSE</strong> (+) [5’?3’]:<br />

Nhe I<br />

Pme I<br />

Afl II<br />

H<strong>in</strong>d III<br />

Asp718 I<br />

Kpn I<br />

BamH I<br />

BstX I<br />

EcoR I<br />

EcoR V<br />

BstX I<br />

Not I<br />

Xho I<br />

Xba I<br />

Apa I<br />

Locations of <strong>cDNA</strong> Features:<br />

<strong>cDNA</strong> <strong>in</strong>sert: nt 912-2935<br />

<strong>src</strong> ORF: nt 1079-2686<br />

<strong>K296R</strong>: AAA to AGG nt 1967-1969<br />

<strong>Y528F</strong>: TAC to TCC nt 2663-2665<br />

PmeI<br />

Schematic Map of <strong>src</strong> (<strong>dom</strong>. <strong>neg</strong>.) <strong>cDNA</strong> :<br />

DNA Sequence:<br />

The complete sequence file of this plasmid is available<br />

at: www.upstatebiotech.com<br />

Transient transfection protocol for Cos-1 cells<br />

Note: The protocol described below has been optimized for Cos-1 cells. Successful transfection of each cell type<br />

requires optimization of the basic protocol. Variables to consider for optimization <strong>in</strong>clude, but are not limited to: cell<br />

density, transfection reagent, duration of transfection and DNA concentration.<br />

1. Seed a six-well tissue culture plate with 1-2 x 10 5 Cos-1 cells <strong>in</strong> 2ml of DMEM supplemented with 10% fetal calf<br />

serum. Incubate for 18-24 hours at 37ºC or until the cells are 40-60% confluent <strong>in</strong> a CO2 humidified <strong>in</strong>cubator.<br />

2. Dilute 1-2μg of DNA <strong>in</strong>to 100μl serum free DMEM <strong>in</strong> a sterile tube. To this tube, add 6μl of PLUS Reagent<br />

found <strong>in</strong> the LIPOFECTAMINE PLUS Reagent kit (Life Technologies). Allow mixture to stand for 15 m<strong>in</strong>utes<br />

at room temperature. In a second tube dilute 4μl of LIPOFECTAMINE Reagent <strong>in</strong>to 100μl serum free DMEM.<br />

3. Comb<strong>in</strong>e the two solutions, mix<strong>in</strong>g gently and <strong>in</strong>cubate at room temperature for 10-15 m<strong>in</strong>utes.<br />

4. Wash cells once with 2ml serum free DMEM.<br />

5. For each transfection, add 0.8ml serum-free medium to each tube conta<strong>in</strong><strong>in</strong>g the LIPOFECTAMINE PLUS<br />

Reagent - DNA complexes. Mix gently and overlay the complexes onto cells.<br />

6. Incubate the cells for 3 hours at 37ºC <strong>in</strong> a CO2 humidified <strong>in</strong>cubator.<br />

7. Remove the DNA-conta<strong>in</strong><strong>in</strong>g medium and replace with 2ml of DMEM supplemented with 10% fetal calf serum.<br />

Incubate cells 37ºC <strong>in</strong> a CO2 humidified <strong>in</strong>cubator for an additional 48-72 hours.<br />

H<strong>in</strong>d III<br />

8. Assay cell extracts for gene expression or activity at 48-72 hours post transfection.<br />

LIPOFECTAMINE PLUS IS a registered trademark of Life Technologies, Inc.<br />

Xba I<br />

<strong>src</strong> ORF<br />

H<strong>in</strong>d iii


Page Three of Three<br />

Catalog # 21-154<br />

Lot # 17759<br />

Restriction Endonuclease Map by Position: <strong>src</strong> (<strong>dom</strong>. <strong>neg</strong>.) <strong>in</strong> <strong>pUSE</strong><strong>amp</strong><br />

(Frequency < 3; Recognition sites >5 bp)<br />

Restriction sites found <strong>in</strong> <strong>in</strong>sert are <strong>in</strong> bold type.<br />

12 Bgl II<br />

12 NcrI<br />

55 StySJ<br />

161 MfeI<br />

161 Mun I<br />

180 Bpu10 I<br />

208 Nru I<br />

228 Afl III<br />

228 Mlu I<br />

249 Spe I<br />

484 Nde I<br />

590 BsaA I<br />

590 Eco105 I<br />

590 SnaB I<br />

593 Eco105 I<br />

876 Bsa I<br />

876 Eco31I<br />

895 Nhe I<br />

899 Ace II<br />

904 Pme I<br />

908 Afl II<br />

908 Bfr I<br />

908 Bst98 I<br />

911 Bbr I<br />

911 EcoVIII<br />

911 H<strong>in</strong>d III<br />

913 Bfr I<br />

918 BspDI<br />

918 Cla I<br />

961 EcoB I<br />

1031 Xba I<br />

1053 Xcm I<br />

1085 Bsg I<br />

1217 Mlu113 I<br />

1219 Sac II<br />

1220 Bsp120 I<br />

1224 Apa I<br />

1224 PpeI<br />

1246 Mlu113 I<br />

1248 Eco52 I<br />

1248 Sac II<br />

1248 Xma III<br />

1289 Tth111 I<br />

1328 UbaEI<br />

1330 BstE II<br />

1330 EcaI<br />

1342 BstX I<br />

1360 EclHK I<br />

1469 Age I<br />

1469 P<strong>in</strong>AI<br />

1489 Xcm I<br />

1518 Bpu10 I<br />

1593 PpuM I<br />

1610 Bsa I<br />

1610 Eco31I<br />

1721 Bsa XI<br />

1837 RleA I<br />

1846 Van91 I<br />

1935 PpuM I<br />

2000 Stu I<br />

2009 EcoN I<br />

2010 Sse8387 I<br />

2022 BspH I<br />

2041 StySJ<br />

2051 Ecoprr I<br />

2072 Bsg I<br />

2153 Ssp I<br />

2173 Van91 I<br />

2178 Afl III<br />

2178 BspLU11 I<br />

2201 CfrA I<br />

2239 PpuM I<br />

2274 SexA I<br />

2325 Bbs I<br />

2364 Van91 I<br />

2484 EcoRD3<br />

2498 EcoRD3<br />

2502 SexA I<br />

2622 Sse8387 I<br />

2624 Stu I<br />

2640 Bbs I<br />

2697 Fsp I<br />

2724 Bcg I'<br />

2739 UbaEI<br />

2758 Bcg I<br />

2809 Xmn I<br />

2872 Xcm I<br />

2890 EcoR I<br />

2890 HalI<br />

2890 SsoI<br />

2908 AccEBI<br />

2908 BamH I<br />

2908 BnaI<br />

2914 Xba I<br />

2934 Bbr I<br />

2934 EcoVIII<br />

2934 H<strong>in</strong>d III<br />

2940 Acc65 I<br />

2940 Asp718 I<br />

2944 Kpn I<br />

2945 Asp718 I<br />

2952 AccEBI<br />

2952 BamH I<br />

2952 BnaI<br />

2958 Spe I<br />

2971 BstX I<br />

2975 EcoR I<br />

2975 HalI<br />

2975 SsoI<br />

2984 M.SmaDam<br />

2987 EcoR V<br />

2997 BstX I<br />

3002 CciNI<br />

3002 Eco52 I<br />

3002 Not I<br />

3002 Xma III<br />

3007 BsuMI<br />

3007 Sex I<br />

3008 Ccr I<br />

3010 Sci I<br />

3013 Ccr I<br />

3014 Xba I<br />

3020 Bsp120 I<br />

3024 Apa I<br />

3024 PpeI<br />

3029 Pme I<br />

3037 BmeTI<br />

3038 Bcl I<br />

3060 EcoR124 I<br />

3240 Bbs I<br />

3374 Rsr II<br />

3446 NgoM I<br />

3448 Nae I<br />

3448 SauLPI<br />

3548 AdeI<br />

3551 BsaA I<br />

3554 Dra III<br />

3557 AdeI<br />

3608 Bsa XI<br />

3610 UbaD I<br />

3749 Xmn I<br />

3823 BstAPI<br />

3824 ApaB I<br />

3824 Ppu10 I<br />

3826 BfrB I<br />

3828 Nsi I<br />

3845 SexA I<br />

3895 BstAPI<br />

3896 ApaB I<br />

3896 Ppu10 I<br />

3898 BfrB I<br />

3900 Nsi I<br />

4077 Stu I<br />

4078 Avr II<br />

4128 BmeTI<br />

4129 Bcl I<br />

4147 BsaB I<br />

4147 Mam I<br />

4152 Mam I<br />

4194 Eco52 I<br />

4194 Xma III<br />

4390 Fsp I<br />

4406 Tth111 I<br />

4569 EcoR124 II<br />

4592 BsaA I<br />

4684 BscE I<br />

4684 BseP I<br />

4685 BssH II<br />

4690 BscE I<br />

4788 NgoM I<br />

4790 Nae I<br />

4790 SauLPI<br />

4804 Cpo I<br />

4804 Csp I<br />

4809 Cpo I<br />

4970 Cbi I<br />

4970 Csp45 I<br />

4970 Sfu I<br />

4974 Cbi I<br />

4974 Sfu I<br />

5071 NgoM I<br />

5073 Nae I<br />

5073 SauLPI<br />

5101 EcoD XXI<br />

5207 CfrA I<br />

5208 BsaM I<br />

5208 Bsm I<br />

5260 Bst1107 I<br />

5502 Bsa XI<br />

5519 StyLT III<br />

5639 Afl III<br />

5639 BspLU11 I<br />

5958 EcoRD2<br />

5971 EcoRD2<br />

6359 BspH I<br />

6532 EclHK I<br />

6593 Bsa I<br />

6593 Eco31I<br />

6754 Fsp I<br />

6758 Psp1406 I<br />

6902 Pvu I<br />

6902 Xor II<br />

6904 Xor II<br />

7012 Sca I<br />

7030 StyLT III<br />

7037 Bcg I'<br />

7071 Bcg I<br />

7131 Psp1406 I<br />

7131 Xmn I<br />

7189 EcoK I<br />

7189 StySP I<br />

7336 Ssp I<br />

7367 BspH I

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