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View/Open - ARAN - National University of Ireland, Galway

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Introduction<br />

as a quencher (Q) can reduce the fluorescence intensity <strong>of</strong> the excited state S ∗ :<br />

Quenching : S ∗ + Q −→ S + Q υq = kq[Q][S ∗ ] (1.5)<br />

The excited fluorophore returns chemically unaltered to the ground state. The<br />

fluorescence quantum yield in the presence <strong>of</strong> a quencher (φq) is given by:<br />

φq =<br />

kf<br />

kf + kic + kisc + kq[Q]<br />

Using equation 1.4, the ratio <strong>of</strong> φq/φ is given by:<br />

φq/φ = 1 + τkq[Q] (1.6)<br />

which is the well-known Stern-Volmer equation. Because fluorescence intensity and<br />

lifetime are both proportional to the quantum yield, equation 1.6 can be written as<br />

I0<br />

I = τ 0<br />

τ = 1 + τ 0kq[Q] (1.7)<br />

τ 0 is the lifetime in the absence <strong>of</strong> a quencher and kq is the bimolecular quenching<br />

constant. The product <strong>of</strong> τ 0kq is the Stern-Volmer quenching constant and indi-<br />

cates the sensitivity <strong>of</strong> the fluorophore to the quencher. kq reflects the efficiency <strong>of</strong><br />

quenching or the accessibility <strong>of</strong> the fluorophores to a quencher.<br />

Static Quenching: In some cases, fluorophores can form a stable complex with<br />

another molecule. If this ground-state is non-fluorescent, then the fluorophore has<br />

been statically quenched. In the case <strong>of</strong> static quenching the lifetime <strong>of</strong> the sample<br />

will not be reduced since those fluorophores which are not complexed, and hence<br />

are able to emit after excitation, will have normal excited state properties. The<br />

fluorescence <strong>of</strong> the sample is reduced since the quencher is essentially reducing the<br />

number <strong>of</strong> fluorophores which can emit (Figure 1.10).<br />

When the complex absorbs light it immediately returns to the ground state<br />

20

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