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Chapter X: Introduction to Fuzzy Set Theory Uncertainty is universal ...

Chapter X: Introduction to Fuzzy Set Theory Uncertainty is universal ...

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target protein sequence from biological point of view using a fuzzy membership function as an alternative<br />

measure, e.g.,<br />

A (S)<br />

⎧ 0 if Eval > 0.1<br />

= ⎨<br />

⎩sim(S,S'<br />

) else<br />

where sim(S,S’) <strong>is</strong> the sequence identity of the alignment, i.e., the percentage of the identical amino acids<br />

in the alignment.<br />

0.8<br />

0.6<br />

0.4<br />

0.2<br />

1 LOW MEDIUM HIGH<br />

0<br />

0 0.2 0.4 0.6 0.8 1<br />

LOW MEDIUM HIGH<br />

1<br />

0.8<br />

0.6<br />

0.4<br />

0.2<br />

0<br />

0 0.2 0.4 0.6 0.8 1<br />

(a)<br />

(b)<br />

LOW MEDIUM HIGH<br />

1<br />

0.8<br />

0.6<br />

0.4<br />

0.2<br />

0<br />

0 0.2 0.4 0.6 0.8 1<br />

(c)<br />

Figure X.1 Examples of common fuzzy membership functions where X=[0,1]. (a) triangular, (b)<br />

trapezoidal, and (c) smooth quadratic functions. See Example X.xx and problems X.x and X.xx

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