Development and Application of Novel ... - Jacobs University
Development and Application of Novel ... - Jacobs University
Development and Application of Novel ... - Jacobs University
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PART I: CAPDE<br />
quantum-mechanics<br />
approach.<br />
The web server<br />
PIC [68]<br />
calculates the<br />
molecular<br />
interactions using<br />
-<br />
http://pic.mbu.iisc.er<br />
net.in/job.html<br />
published criteria.<br />
The web server<br />
Protein<br />
interaction<br />
COCOMAPS<br />
[69]<br />
analyzes <strong>and</strong><br />
visualizes interfaces<br />
in biological<br />
complexes using<br />
intermolecular<br />
contact maps based<br />
Hen egg<br />
lysozyme<br />
interaction<br />
with two<br />
antibodies<br />
https://www.molnac<br />
.unisa.it/BioTools/co<br />
comaps/<br />
on distance or<br />
[69]<br />
physicochemical<br />
properties.<br />
The web server<br />
predicts binding<br />
cavity <strong>and</strong><br />
West Nile<br />
mutational effect on<br />
Virus<br />
http://mspc.bii.a-<br />
DEPTH [70]<br />
protein stability<br />
NS2B/NS3<br />
star.edu.sg/tankp/int<br />
Residue<br />
using residue depth<br />
protease<br />
ro.html<br />
depth <strong>and</strong><br />
<strong>and</strong> solvent<br />
[70]<br />
stability<br />
accessible surface<br />
area.<br />
SRIde [71]<br />
The web serve<br />
predicts the<br />
contribution <strong>of</strong><br />
residues in protein<br />
TIM-barrel<br />
proteins<br />
[102]<br />
http://sride.enzim.h<br />
u/<br />
20
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