Bacteria from Fish and Other Aquatic Animals - Survival-training.info

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Aquatic Animal Species and Organism Relationship 21 6. Associated with traumatic ulcerative dermatitis caused by biting, bronchopneumonia and osteomyelitis Turtles (Pseudemis scripta) Aeromonas hydrophila Infection 614 Hawaiian green turtle Citrobacter freundii, Hafnia alvei, Leatherback turtle (Dermochelys coriacea) Loggerhead sea turtle (Caretta caretta) Ridley sea turtle (Lepidochelys olivacea) Rhynchopelates oxyrhynchus Temminck and Schlegel, Coastal fish – Japan (Therapon oxyrhynchus) Photobacterium damselae ssp. damselae Roach (Rutilus rutilus Linnaeus) 1. Aeromonas salmonicida ssp. Rockfish, Schlegel’s black rockfish (Sebastes schlegeli Hildendorf) Klebsiella oxytoca, Photobacterium damselae, Pseudomonas fluorescens, Pseudomonas putrefaciens, Pseudomonas stutzeri, non-haemolytic Streptococcus spp., Vibrio alginolyticus, Vibrio fluvialis Nasal swabs and cloacal swabs from apparently healthy turtles Fluid in body cavity, calcareous nodules in lung parenchyma, lungs congested Aerococcus viridans Gas in diverticulum, with multifocal granulomatous serositis. Green mucoid fluid and fibrinonecrotic membrane on mucosa. Pathogenicity not determined. Most likely normal flora from these sites. Valvular endocarditis and septicaemia 5 590 Oesophageal diverticulum 755 Vibrio mimicus Reduced viability of eggs Cause of food poisoning in achromogenes 2. Atypical Aeromonas salmonicida 3. Yersinia ruckeri humans Vibrio hollisae Intestinal contents Non-pathogenic 580 1. Large open lesions, areas of descalation. No typical ‘furuncles’ seen 2. Cutaneous ulcers 3. Disease is associated with poor environmental conditions Atypical Aeromonas salmonicida Ulcer on the trunk. Organism isolated from the kidney and brain 1. Mortalities 2. Ulcerative dermatitis 3. Yersiniosis 4 352 534 772 825 826 Mortality 385 403 continued
22 Chapter 1 Table 1.1. Continued. Host Pathogen Normal flora Tissue site Disease status Ref Rockling Fourbeard rockling (Enchelyopus cimbrius Linnaeus) Atypical Aeromonas salmonicida Skin ulcers 832 Rotifer (Brachionus plicatilis) 1. Vibrio rotiferianus 2. V. neptunius Rudd (Scardinius erythrophthalmus Linnaeus) SALMONIDS Arctic Char (Salvelinus alpinus Linnaeus) Salmon Atlantic salmon (Salmo salar Linnaeus) 1. Aeromonas salmonicida ssp. achromogenes 2. Yersinia ruckeri 1. Aeromonas salmonicida ssp. salmonicida 2. Atypical Aeromonas salmonicida 3. Serratia liquefaciens 1. Aeromonas salmonicida ssp. salmonicida 2. Atypical Aeromonas salmonicida 3. Flavobacterium psychrophilum 4. Listonella anguillarum 5. Moritella viscosa 6. Mycobacterium chelonae 7. Nocardia seriolae 8. Pasteurella skyensis 9. Photobacterium damselae ssp. damselae 10. Pseudomonas anguilliseptica 11. Renibacterium salmoninarum 12. Serratia liquefaciens 13. Streptobacillus moniliformis-like organism 14. Tenacibaculum maritimum 15. Vagococcus salmoninarum 1, 2. Isolated from rotifer flow-through culture system. Pathogenicity not known 4. Carnobacterium spp. 1, 2. Skin ulcers 3. Redness and swelling around anus, ascites, haemorrhagic internal tissues 22. Carnobacterium inhibens 23. Carnobacterium spp. 24. Lactobacillus spp. 25. Photobacterium iliopiscarium 26. Vibrio pacinii 1. Skin ulcers 2. Organism from head kidney, cutaneous lesions 3. Erosion of fins 5. Skin ulcers, internal dark-brown petechiae or ecchymotic haemorrhage 6. Granuloma-like nodules in tissues 7. Granulomatous lesions on body 8. Multifocal areas of coagulative necrosis in kidney, liver, spleen 10. Petechial haemorrhages on skin, mouth and anus, peritoneum and liver 11. White nodules in kidney 12. Swelling of kidneys, bleeding at the anus and intestine, gastroenteritis 13. Organism intracellular in tissues, endothelial cells of kidney glomeruli enlarged 1. Furunculosis 2. Infection 3. Mortality 4. Non-pathogenic 1. Furunculosis 2. Similar to furunculosis 3. Morbidity rather than mortality 4. Vibriosis 5. Winter ulcers 6. Mycobacteriosis 7. Nocardiosis 8. Mortality 9. Pathogenic in challenge experiments 10. Haemorrhagic disease 11. Bacterial kidney disease 12, 13. Mortality 14. Bacterial stomatitis (mouth rot) in smolts 15. Mortality 16. Blindness 17. Possible pathogen 305 740 209 318 323 352 648 715 49 100 107 117 132 133 137 144 232 306 330 352 411 412 416 450 506 519
Page 1 and 2: Bacteria from Fish and Other Aquati
Page 3 and 4: Contents List of Tables and Figures
Page 5 and 6: List of Tables and Figures Tables T
Page 7 and 8: Foreword While aquatic animal disea
Page 9 and 10: Acknowledgements xi Principal spons
Page 11 and 12: Introduction xiii Medical laborator
Page 13 and 14: Photographs of Culture and Microsco
Page 15 and 16: Fig. 11. Aeromonas veronii ssp. sob
Page 17 and 18: Fig. 22. Edwardsiella tarda on BA,
Page 19 and 20: Fig. 43. Listonella anguillarum, Gr
Page 21 and 22: Fig. 55. Plesiomonas shigelloides,
Page 23 and 24: Fig. 69. Vibrio alginolyticus, Gram
Page 25 and 26: Fig. 82. Vibrio harveyi on MSA-B, 4
Page 27 and 28: Fig. 98. Vibrio proteolyticus on BA
Page 29 and 30: Fig. 118. Methyl Red reaction. Posi
Page 31 and 32: 2 Chapter 1 Table 1.1. Host species
Page 33 and 34: 4 Chapter 1 Table 1.1. Continued. H
Page 39 and 40: 10 Chapter 1 Table 1.1. Continued.
Page 49: 20 Chapter 1 Table 1.1. Continued.
Page 65 and 66: 36 Chapter 1 Bacterial gill disease
Page 67 and 68: 38 Chapter 1 Table 1.2. Bacterial p
Page 101 and 102:
72 Chapter 1 Table 1.2. Continued.
Page 103 and 104:
Page 105 and 106:
76 Chapter 1 of the test, or the us
Page 107 and 108:
78 Chapter 1 in a similar manner to
Page 109 and 110:
80 Chapter 1 phenotypic results rec
Page 111 and 112:
82 Chapter 1 formerly Y. enterocoli
Page 113 and 114:
84 Chapter 2 2.1 Specimen Collectio
Page 115 and 116:
86 Chapter 2 Table 2.3. Specific cu
Page 117 and 118:
Page 119 and 120:
Page 121 and 122:
Page 123 and 124:
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Page 127 and 128:
Page 129 and 130:
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Page 135 and 136:
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Page 139 and 140:
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114 Chapter 2 reaction, oxidase and
Page 145 and 146:
116 Chapter 2 API 20E API 20NE API
Page 147 and 148:
118 Chapter 3 Table 3.1. Interpreta
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120 Chapter 3 to produce alkaline p
Page 151 and 152:
122 Chapter 3 V. splendidus biovar
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124 Chapter 3 are likely to produce
Page 155 and 156:
126 Chapter 3 Table 3.2. Carnobacte
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128 Chapter 3 reported a negative r
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130 Chapter 3 Table 3.5. Further di
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132 Chapter 3 to be due to the diff
Page 163 and 164:
134 Chapter 3 control and a negativ
Page 165 and 166:
136 Chapter 3 Yersinia ruckeri Stra
Page 167 and 168:
138 Chapter 4 Fig. 4.1. Schematic f
Page 169 and 170:
140 Table 4.1. Aeromonas salmonicid
Page 171 and 172:
142 Table 4.3. Aeromonas spp. - mot
Page 173 and 174:
144 Table 4.5. Brucella spp. Test G
Page 175 and 176:
146 Table 4.8. Cytophaga-Flavobacte
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148 Table 4.8. Continued. Test Gm O
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150 Table 4.10. Continued. Test Gm
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Page 185 and 186:
Page 187 and 188:
Page 189 and 190:
160 Table 4.13. Gram-positive cocci
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164 Table 4.14. Gram-positive rods.
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166 Table 4.15. Mycobacterium and N
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168 Table 4.17. Mycoplasma spp. Tes
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178 Table 4.23. API 20E database bi
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180 Table 4.23. Continued. Tests on
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182 Table 4.23. Continued. Tests on
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184 Table 4.24. API 20E database nu
Page 215 and 216:
186 Table 4.24. Continued. Organism
Page 217 and 218:
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190 Table 4.25. API 20E database nu
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192 Table 4.25. Continued. API 20 E
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Page 225 and 226:
Page 227 and 228:
198 Table 4.26. Continued. Listonel
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200 Table 4.27. API 50CH database b
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202 Table 4.27. Continued. 1 2 3 4
Page 233 and 234:
Page 235 and 236:
Page 237 and 238:
208 Table 4.28. API Coryne database
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210 Table 4.30. API Rapid ID32 Stre
Page 241 and 242:
212 Table 4.31. API ZYM database re
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214 Table 4.31. Continued. Well 1 2
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216 Table 4.31. Continued. Well 1 2
Page 247 and 248:
218 Table 4.32. Strains quoted in r
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5 Technical Methods 5.1 Total Bacte
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224 Chapter 5 Incubation Place plat
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226 Chapter 6 Table 6.1. List of sp
Page 257 and 258:
Page 259 and 260:
Page 261 and 262:
232 Chapter 6 Edwardsiella spp. PCR
Page 263 and 264:
234 Chapter 6 Extraction of DNA fro
Page 265 and 266:
236 Chapter 6 The nucleotides can a
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238 Chapter 6 Table 6.3. Universal
Page 269 and 270:
240 Chapter 6 Visualize DNA on agar
Page 271 and 272:
242 Chapter 6 document with the seq
Page 273 and 274:
7 Preparation of Media for Culture
Page 275 and 276:
246 Chapter 7 Blood agar - BA Reage
Page 277 and 278:
248 Chapter 7 Edwardsiella ictaluri
Page 279 and 280:
250 Chapter 7 Flexibacter maintenan
Page 281 and 282:
252 Chapter 7 Marine 2216 agar (Dif
Page 283 and 284:
254 Chapter 7 Mycoplasma medium - m
Page 285 and 286:
256 Chapter 7 R2A agar (Oxoid CM 90
Page 287 and 288:
258 Chapter 7 Siem selective medium
Page 289 and 290:
260 Chapter 7 VVM Selective medium
Page 291 and 292:
262 Chapter 7 Brucella: growth on s
Page 293 and 294:
264 Chapter 7 Carbohydrate fermenta
Page 295 and 296:
266 Chapter 7 Congo Red. Tests for
Page 297 and 298:
268 Chapter 7 Furunculosis agar (Fo
Page 299 and 300:
270 Chapter 7 Indoxyl acetate hydro
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272 Chapter 7 Glucose (10% w/v) 10
Page 303 and 304:
274 Chapter 7 ONPG - o-nitrophenyl-
Page 305 and 306:
276 Chapter 7 Salt - 20% stock solu
Page 307 and 308:
Further Reading and Other Informati
Page 309 and 310:
280 Further Reading List of Bacteri
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282 Appendix Common name Scientific
Page 313 and 314:
Page 315 and 316:
Page 317 and 318:
288 Glossary C Ca Cat CBBA CCA CCRC
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290 Glossary O Oxidative (aerobic m
Page 321 and 322:
References 1 Abbott, S.L., Cheung,
Page 323 and 324:
294 References otherwise infected w
Page 325 and 326:
296 References 87 Bergman, S., Seli
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298 References Journal of Systemati
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300 References ribonucleic acid seq
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302 References ‘winter disease’
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304 References 273 Fukuda, Y., Mats
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306 References resistance of virule
Page 337 and 338:
308 References and an emended descr
Page 339 and 340:
310 References the Enterobacteriace
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312 References an epizootic of cult
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314 References 512 Macián, M.C., L
Page 345 and 346:
316 References Plecoglossus altivel
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318 References sponge. Internationa
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320 References fish pathogens. Dise
Page 351 and 352:
322 References Listonella and reass
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324 References 750 Toranzo, A.E., B
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326 References 795 Vreeland, R.H.,
Page 357 and 358:
328 References 842 Wood, R. (1965)
Page 359 and 360:
330 Index Aeromonas continued A. ca
Page 361 and 362:
332 Index API identification system
Page 363 and 364:
334 Index Brucella agar 246 Brucell
Page 365 and 366:
336 Index Colony forming units (CFU
Page 367 and 368:
338 Index Dolphin continued Striped
Page 369 and 370:
340 Index Flavobacterium species co
Page 371 and 372:
342 Index Granulicatella continued
Page 373 and 374:
344 Index Laminaria 59 Laminaria ja
Page 375 and 376:
346 Index Mycobacterium continued M
Page 377 and 378:
348 Index Peled see Whitefish Pelec
Page 379 and 380:
350 Index Pseudoalteromonas continu
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352 Index Salmonella continued S. j
Page 383 and 384:
354 Index Shewanella marine agar (S
Page 385 and 386:
356 Index Strontium chloride B enri
Page 387 and 388:
358 Index Vibrio continued V. brasi
Page 389 and 390:
360 Index Vibrio continued V. scoph
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