The three-dimensional structure of humic substances and soil ...
The three-dimensional structure of humic substances and soil ...
The three-dimensional structure of humic substances and soil ...
You also want an ePaper? Increase the reach of your titles
YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.
68<br />
ergy <strong>of</strong> the molecular system was calculated with<br />
6993.92 kJ 0.1 nm -1 mo1-1 <strong>and</strong> a gradient (derivative <strong>of</strong><br />
the energy with respect to all Cartesian coordinates) <strong>of</strong><br />
91.16 kJ 0.1 nm -1 mol -I. <strong>The</strong> termination conditions<br />
for this calculation were 83.80 kJ nm- 1 mol - 1 <strong>and</strong> 11070<br />
cycles maximum. After approximately 4700 calculation<br />
Fig. 6. First approximation (1 cycle, 3 points, convergence limit <strong>of</strong><br />
83.80 kJ 0.1 nm -1 mol ~) for the geometrical optimization <strong>of</strong> the HA<br />
<strong>structure</strong> (II) given in Fig. 5 (Compute; Single Point; Geometry Optimi-<br />
zation) by semi-empirical calculations. Display <strong>of</strong> the <strong>structure</strong> in the<br />
disks mode (Rendering; Disks)<br />
~ J<br />
Fig. 7. Geometry optimization<br />
<strong>and</strong> energy minimization <strong>of</strong> the<br />
3 D <strong>structure</strong> <strong>of</strong> HA (II, Fig. 6)<br />
after 4700 calculation cycles <strong>and</strong><br />
a resulting total energy <strong>of</strong><br />
710.70 kJ nm -1 mo1-1 <strong>and</strong> a<br />
convergence gradient <strong>of</strong><br />
0.037 kJ nm- 1 mol- 1<br />
cycles with a convergence limit <strong>of</strong> 0.83 kJ 0.1 nm -1<br />
tool-l, the energy minimization leads to a molecular en-<br />
ergy <strong>of</strong> 752.57kJ 0.1 nm -1 tool -1 with a gradient <strong>of</strong><br />
0.71 kJ 0.1 nm -1 tool -1. As an illustration <strong>of</strong> the energy<br />
minimization process in Fig. 7 the corresponding HA<br />
<strong>structure</strong> is displayed. Rotation <strong>of</strong> the energy-minimized