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The three-dimensional structure of humic substances and soil ...

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68<br />

ergy <strong>of</strong> the molecular system was calculated with<br />

6993.92 kJ 0.1 nm -1 mo1-1 <strong>and</strong> a gradient (derivative <strong>of</strong><br />

the energy with respect to all Cartesian coordinates) <strong>of</strong><br />

91.16 kJ 0.1 nm -1 mol -I. <strong>The</strong> termination conditions<br />

for this calculation were 83.80 kJ nm- 1 mol - 1 <strong>and</strong> 11070<br />

cycles maximum. After approximately 4700 calculation<br />

Fig. 6. First approximation (1 cycle, 3 points, convergence limit <strong>of</strong><br />

83.80 kJ 0.1 nm -1 mol ~) for the geometrical optimization <strong>of</strong> the HA<br />

<strong>structure</strong> (II) given in Fig. 5 (Compute; Single Point; Geometry Optimi-<br />

zation) by semi-empirical calculations. Display <strong>of</strong> the <strong>structure</strong> in the<br />

disks mode (Rendering; Disks)<br />

~ J<br />

Fig. 7. Geometry optimization<br />

<strong>and</strong> energy minimization <strong>of</strong> the<br />

3 D <strong>structure</strong> <strong>of</strong> HA (II, Fig. 6)<br />

after 4700 calculation cycles <strong>and</strong><br />

a resulting total energy <strong>of</strong><br />

710.70 kJ nm -1 mo1-1 <strong>and</strong> a<br />

convergence gradient <strong>of</strong><br />

0.037 kJ nm- 1 mol- 1<br />

cycles with a convergence limit <strong>of</strong> 0.83 kJ 0.1 nm -1<br />

tool-l, the energy minimization leads to a molecular en-<br />

ergy <strong>of</strong> 752.57kJ 0.1 nm -1 tool -1 with a gradient <strong>of</strong><br />

0.71 kJ 0.1 nm -1 tool -1. As an illustration <strong>of</strong> the energy<br />

minimization process in Fig. 7 the corresponding HA<br />

<strong>structure</strong> is displayed. Rotation <strong>of</strong> the energy-minimized

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