Chem3D 8.0 Manual - CambridgeSoft

Center the selected atomsin the active window.Change the color of selected atoms.Show serial numbers for selected atoms.Show van der Walls dotsurfaces for selected atoms.Break bonds between selected atoms.Create bonds between atomsthat are close together.Invert stereochemistry at selected atoms.Remove selected atomsand bonds from view.Show all hidden atoms.Show hidden and hide visible atoms.Display rotation bars.Open messages window.Show hydrogens and lonepairs while building.Reduce model.Minimize the error in yourmodel based on its geometry.Overlay fragments by atom pairs.Resize the model to fitin Model Window.Resize all model frames to fitin model window.Move selected atoms parallelto X-Y, Y-Z, or X-Z plane.Show element symbols forselected atoms.Show atoms as spheres.Display the measurementfor selected atoms.Change bond order of selectedatoms to single, double, or triple.Add a dummy atom (Du) tothe center of the selection.Position an atom relative toother atoms.Remove atoms and bonds thatare not selected from view.Show hidden atoms that arenext to selected atoms.Create a group definitionfor the current selection.Display Movie Controller.Show Model Table items.Enlarge model.Correct atom types and numbers ofhydrogens for the selected atoms.Orient one fragment relative toanother by atom pairs (Specifiedby Set Distance Command).Reflect selected atomsthrough a plane.Resize the selected atoms andbonds to fill the Model window.Show the deviation of selectedatoms from the normal plane.Display bond lengths and angels,dihedral angles, close contacts,and ring closures.Perform a series of rotationsaround a specified axis.Perform a series of rotationsaround the Y-axis.Compute a variety of physical properties.Compute orbitals for surfaces orpartial charge display usingExtended Huckel theory.Perform a series of rotations thatvary the specified dihedral angle.Perform a series of rotationsaround the Z-axis.Perform a series of rotationsaround the X-axis.Display Information about ClientRun external input file.Create Input file for external use or editing.Specify properties to compute for current conformation of active model.Specify options and minimize the active model.Run a job that is stored in a Job file.Repeat the last job.