IntroductionMcNally K, Childs KL. (2009) Genomewide SNP variation reveals relationships among l<strong>and</strong>races <strong>and</strong>modern varieties of rice. In 'Proc Natl Acad Sci (PNAS)'. U S A. (Ed. PNAS) pp. 12273-12278. (online)Miyoshi K, Ahn BO, Kawakatsu T, Ito Y, Itoh JI, Nagato Y, Kurata N (2004) PLASTOCHRON1, atimekeeper of leaf initiation in rice, encodes cytochrome P450. PNAS 101, 875-880.Morita M, Tang D, Miyamoto N, Goto Y, Ukai Y, Nemoto K (2005) Quantitative trait loci <strong>for</strong> ricephyllochron in Lemont × IR36 cross Plant Production Science 8, 199-202.Namuco OS, Cairns JE, Johnson DE (2009) Investigating <strong>early</strong> <strong>vigor</strong> in upl<strong>and</strong> rice (<strong>Oryza</strong> <strong>sativa</strong> L.):Part I. Seedling growth <strong>and</strong> grain yield in competition with weeds. Field Crop Research 113, 197–206.Nemoto K, Morita S, Baba T (1995) Shoot <strong>and</strong> root development in rice related to the phyllochron.Crop Science 35, 24-29.Nouvellon Y, Begue A, Moran MS, Seen DL, Rambal S, Luquet D, Chehbouni G, Inoue Y (2000) PARextinction in shortgrass ecosystems: effects of clumping, sky conditions <strong>and</strong> soil albedo. Agricutural<strong>and</strong> <strong>for</strong>est meteorology 105, 21-41.Poorter H (1999) Growth responses of 15 rain-<strong>for</strong>est tree species to a light gradient: the relativeimportance of morphological <strong>and</strong> physiological traits. Functional Ecology 13, 396–410.Poorter H, Nagel O (2000) The role of biomass allocation in the growth response of plants todifferent levels of light, CO2, nutrients <strong>and</strong> water: a quantitative review. Australian Journal of PlantPhysiology 27, 595-607.Rebetzke GJ, Botwright TL, Moore CS, Richards RA, Condon AG (2004) Genotypic variation in specificleaf area <strong>for</strong> <strong>genetic</strong> improvement of <strong>early</strong> <strong>vigor</strong> in wheat. Field Crop Research 88, 179-189.Rebetzke GJ, Richards RA (1999) Genetic improvement of <strong>early</strong> <strong>vigor</strong> in wheat. Australian Journal ofAgricultural Research 50, 291 - 302Rebetzke GJ, Richards RA, Fettell NA, Long M, Condon AG, Forrester RI, Botwright TL (2007)Genotypic increases in coleoptile length improves st<strong>and</strong> establishment, <strong>vigor</strong> <strong>and</strong> grain yield of deepsownwheat Field Crop Research 100, 10-23.Riahinia S, Dehdashti SM (2008) Row Spacing Effects on Light Extinction Coefficients, Leaf AreaIndex, Leaf Area Index Affecting in Photosynthesis <strong>and</strong> Grain Yield of Corn (Zea mays L.) <strong>and</strong>Sunflower (Helianthus annuus L.). Journal of Biological Sciences 8, 954-957.Shipley B (2006) Net assimilation rate, specific leaf area <strong>and</strong> leaf mass ratio: which is most closelycorrelated with relative growth rate? A meta-analysis. Functional Ecology 20, 565–574.Tisné S, Reymond M, VILE D, Fabre J, Dauzat M, Koormeef MG, C. (2008) Combined <strong>genetic</strong> <strong>and</strong>modeling approaches reveal that epidermal cell area <strong>and</strong> number in leaves are controlled by leaf <strong>and</strong>plant developmental processes in Arabidopsis. Plant Physiology 148, 1117-1127.Trachsel S, Messmer R, Stamp P, Ruta N, Hund A (2009) QTLs <strong>for</strong> <strong>early</strong> <strong>vigor</strong> of tropical maize.Molecular Breeding 25, 91-103.W. ter Steege M, den Ouden FM, Lambers H, Stam P, Peeters AJM (2005) Genetic <strong>and</strong> physiologicalArchitecture of <strong>early</strong> <strong>vigor</strong> in Aegilops tauschii, the D-Genome donor of hexaploid wheat. Aquantitative trait loci analysis. Plant Physiology 139, 1078–1094.Wang E, Robertson MJ, et al. (2002) Development of a generic crop model template in the croppingsystem model APSIM. European Journal of Agronomy 18, 121-140.Yin X, Kropff M (1996) The effect of temperature on leaf appearance in rice. Annals of botany 77,215–221.Zou J, Chen Z, Zhang S, Zhang W, Jiang G, Zhao X, Zhai W, Pan X, Zhu L (2005) Characterizations <strong>and</strong>fine mapping of a mutant gene <strong>for</strong> high tillering <strong>and</strong> dwarf in rice ( <strong>Oryza</strong> <strong>sativa</strong>L.). Planta 222, 604-612.50
Introduction51
- Page 1 and 2: IntroductionMontpellier Supagro2, P
- Page 4 and 5: Introductionahora ya puedes decir q
- Page 6 and 7: IntroductionTable of contentsAknowl
- Page 8 and 9: IntroductionIntroductionCONTEXTHost
- Page 10 and 11: IntroductionRice crop performance u
- Page 12 and 13: IntroductionEarly vigor was also re
- Page 14 and 15: Introductionconsidering traits in a
- Page 16 and 17: IntroductionPhotosynthesis is one o
- Page 18 and 19: IntroductionThis PhD work focuses t
- Page 20 and 21: IntroductionFigure 3. Dry-down expe
- Page 22 and 23: IntroductionREFERENCESAsch, F., Sow
- Page 24 and 25: IntroductionGlaszmann, J. C., Benoi
- Page 26 and 27: IntroductionMcNally, K. L., Childs,
- Page 28 and 29: Introductionbiotechnologically and
- Page 30 and 31: Introduction30
- Page 32 and 33: IntroductionINTRODUCTIONEarly vigor
- Page 34 and 35: IntroductionThe underlying hypothes
- Page 36 and 37: IntroductionMeasurement of environm
- Page 38 and 39: IntroductionRESULTSRange of environ
- Page 40 and 41: Introduction5050Frequency403020Exp1
- Page 42 and 43: IntroductionTable 2: Matrix of corr
- Page 44 and 45: Introductionwhether DR affected RGR
- Page 46 and 47: Introductiontwo different rice dive
- Page 48 and 49: IntroductionCONCLUSIONSThis study t
- Page 52 and 53: IntroductionChapter II : Phenomics
- Page 54 and 55: Introductiongrowth (leaf appearance
- Page 56 and 57: IntroductionTable 1 Description of
- Page 58 and 59: IntroductionFTSW ' AW WPFC WP(Eq.1)
- Page 60 and 61: IntroductionIn Eq.5 d and c are the
- Page 62 and 63: IntroductionFigure 1 Factorial plan
- Page 64 and 65: IntroductionEffect of water deficit
- Page 66 and 67: IntroductionRelations between const
- Page 68 and 69: IntroductionCorrelations among drou
- Page 70 and 71: IntroductionGenotype clustering bas
- Page 72 and 73: IntroductionSimilar numbers of vari
- Page 74 and 75: Introductiona b c3210302520151050sh
- Page 76 and 77: IntroductionADP-glucose pyrophospho
- Page 78 and 79: Introductionobserved in well watere
- Page 80 and 81: IntroductionHe, H. Y., Koike, M., I
- Page 82 and 83: IntroductionTisne, S., Schmalenbach
- Page 84 and 85: IntroductionChapter III : Does earl
- Page 86 and 87: Introductionrate (DR, defined as th
- Page 88 and 89: IntroductionMean minimum and maximu
- Page 90 and 91: Introduction10AM to monitor water l
- Page 92 and 93: IntroductionSpearman correlation an
- Page 94 and 95: IntroductionTable 1. Broad sense he
- Page 96 and 97: IntroductionAll drought response va
- Page 98 and 99: IntroductionDo genotype groups havi
- Page 100 and 101:
Introductioninvestigated, but none
- Page 102 and 103:
IntroductionTable 6 Partial conting
- Page 104 and 105:
Introductiong.PT -1cm.leaf rank -13
- Page 106 and 107:
Introductionbecause in rapidly expa
- Page 108 and 109:
IntroductionThe normalization of TR
- Page 110 and 111:
Introductionmonitoring of transpira
- Page 112 and 113:
IntroductionKato, Y., Hirotsu, S.,
- Page 114 and 115:
IntroductionZhao, D. L., Atlin, G.
- Page 116 and 117:
IntroductionSynthesis, discussion a
- Page 118 and 119:
Introduction(Phenomics of Rice for
- Page 120 and 121:
IntroductionConsequently, as descri
- Page 122 and 123:
Introduction Depending on the genot
- Page 124 and 125:
Introductionunder well watered cond
- Page 126 and 127:
IntroductionDiversity panels can al
- Page 128 and 129:
IntroductionRichards, R. A. and Luk
- Page 130 and 131:
IntroductionAppendix I Article Luqu
- Page 132 and 133:
Introductiontraits (Chapman et al.
- Page 134 and 135:
Introductiona- Organ initiation rat
- Page 136 and 137:
IntroductionSome model parameters w
- Page 138 and 139:
Introductionshow restrained tiller
- Page 140 and 141:
IntroductionPlasto:CR (0.730) > SDW
- Page 142 and 143:
Introductioneffects on early plant
- Page 144 and 145:
Introductionassimilate invested, th
- Page 146 and 147:
Introductionsignal state variable.
- Page 148 and 149:
IntroductionItoh JI, Hasegawa A, Ki
- Page 150 and 151:
IntroductionTABLESTable 3 : list of
- Page 152 and 153:
IntroductionTable 3. Stepwise multi
- Page 154 and 155:
IntroductionIctMGRPlastoKrespTbKdfE
- Page 156 and 157:
IntroductionTDW (g)108642DR = 0.025
- Page 158 and 159:
Introduction158
- Page 160 and 161:
Introduction160
- Page 162 and 163:
Introduction162
- Page 164 and 165:
Introductionétablissement de la cu