heat shock proteins, processes of huge importance during transition especially when occurring inthe host environment.• Guanine nucleotide binding proteins, important members of the signal-transduction machinery.Alpha and beta subunits have been described before in the Yeast and Mycelia libraries and theirimportance in thermal transition has been described, but the Gamma subunit is being described forthe first time in the C-Y library.Protein tyrosine phosphatase-Pyp, a phosphatase that regulates numerous biological processess byhydrolyzing the protein-associated phosphate monoesters (dephosphorylation), which participatein regulation of cell cycle, growth and proliferation, as well as in cytoskeletal integrity. This gene maybe involved in regulation of the cellular and cell remodeling cycles induced by the stress responseduring the the thermal change to which conidia are submitted during their transition to yeast cells.Recently, the complete genome of three P. brasiliensis isolates has been published in the web andthe annotation of one of them, strain pb03, reveled at least the 90% of all expressed proteins.Aims: Analyze some genes involved in the P. brasiliensis conidia to yeast (C-Y) transition process,based on the knowledge revealed by publication of the fungus’ whole genome, by The BroadInstitute.Methods: We used as probes partial sequences of certain genes integrated to the C-Y EST libraryin a search conducted with the aim of finding complete gene sequences in the Pb03 annotated genome(including introns and exons, as well as expected mRNA products). These sequences weresearched for and found in the data base. PCR primers were designed to amplify in strain ATCC60855 (the same used for construction of the C-Y EST library), the longest fragment possible andthen comparing its sequences with those previously described in the Broad Institute data base, toconfirm the existence of each gene.Results: Search for the complete sequences in P. brasiliensis strain Pb03 annotated genomeresulted in the finding of ORFs (Open Reading Frames) for most of them; complete sequences withintrons and exons were also found. Similarity values were high, between 90 to 100%, with an E valueequal to 0.0 for all of them, so that the probability of at random results was zero, confirming theexistence of these genes in P. brasiliensis. PCR amplification and sequencing of the following geneswas possible:a Cholestenol delta isomerase, a Flavoprotein ubiquinone oxidoreductase (ETF-QO),a putative response regulator receiver SKN7p (annotated as transcription factor prr1), a Guaninenucleotide binding protein gamma 13 (annotated as a predicted protein), a putative protein tyrosinephosphatase (Pyp1). among others, These findings confirm the existence of these genes in P.brasiliensis strain 60855. Clustal W showed the highest similarity between the sequences of thesegenes in strain 60855, as well as in strains with known genomes (Pb01, Pb18 and Pb03).Conclusions: The genes coming from the specific C-Y transition library and their presence in thegenome as confirmed in the Pb03 complete genomic sequence and also, in strain ATCC 60855 PCRamplification, confirm the special connotation of our previous work. As stated, a description of some P.brasiliensis genes obtained from conidia, the infectious propagules causing paracoccidioidomycosis,were shown to correspond to functions related to their transitional process.At the moment and with encouraging results, qPCR is being standardized to estimate the relativeexpression of some of these genes during the C-Y process with emphasis in the differences intheir expression when compared to the Mycelia and Yeast forms; these studies may reveal possiblecandidate genes useful for genetic manipulation of P. brasiliensis. For instance, generation of stablemutant knockouts in transition-related genes, plus modulation of their expression levels using RNAinterference (RNAi), could be fundamental tools in the understanding of their role in the dimorphicprocess itself and/or their relevance as virulence factors.90
<strong>CD</strong>C42p controls yeast-cell shape and virulencein Paracoccidioides brasiliensisAgostinho J. Almeida 1 , Celia Cunha 1 †, Belem Sampaio-Marques 1 †, Jenny A.Carmona 1 , Agostinho Carvalho 1 , Iran Malavazi 2 , H.Y. Steensma 3 ,D.I. Johnson 4 , E. Logarinho 1 , Cecilia Leão 1 , Gustavo H. Goldman 2 ,A.G. Castro 1 , Paula Ludovico 1 , Fernando Rodrigues 11. Life and Health Sciences Research Institute (ICVS),School of Health Sciences, University of Minho, Braga, Portugal.2. Faculdade de Ciências Farmacêuticas de Ribeirão Preto,Universidade de São Paulo, Brazil.3. Institute of Biology, Leiden University, Leiden, The Netherlands.4. Department of Microbiology and Molecular Genetics,University of Vermont, Burlington, Vermont, USA.† These authors contributed equally for this work.e-mail: ajalmeida@ecsaude.uminho.ptPrevious work in our laboratory The multiple budding nature of Paracoccidioides brasiliensisyeast cells has been suggested to follow alternative control mechanisms during cell growth.As the Rho-like GTPase Cdc42p is a pivotal molecule to establish and maintain polarized cellgrowth, we evaluated the role of this protein in the polymorphic morphology and the virulenceof the yeast-form of this pathogenic fungus.The isolated Pb<strong>CD</strong>C42 gene functionally complements ∆cdc42 S. cerevisiae and triggers aloss of spatiotemporal control of cell division in a temperature-dependent manner.By using antisense technology we knocked-down Pb<strong>CD</strong>C42 in P. brasiliensis yeast cellsshowing that, despite it does not eliminate the multiple budding phenotype, it promotes amore organized and controlled cell growth by decreasing cell size and the typical polymorphismof wild-type cells.Moreover, an 88% decrease in the expression levels of Pb<strong>CD</strong>C42 significantly increasesphagocytosis and abrogates virulence of this dimorphic pathogenic fungus in a micemodel.To the best of our knowledge, we provide for the first time genetic evidences that establish thecentral role of polymorphic morphologies in the pathogenesis of P. brasiliensis, thus openingnew therapeutic targets for the treatment of paracoccidioidomycosis.Acknowledgments:Almeida, A.J., Sampaio-Marques, B. and Carvalho, A. were financially supported by a fellowship(SFRH/BPD/33035/2006, SFRH/BI/15406/2005, and SFRH/BD/11837/2003).The work was mostly supported by a grant from FCT, Portugal (POCTI/ESP/45327/2002)and partially by FAPESP, Brazil.91