List of Publications Professor Klaus Schulten Departments of ...

[282] Dorina Kosztin, Richard Gumport, and Klaus Schulten. Probing the role of structural water in a
duplex oligodeoxyribonucleotide containing a water-mimicking base analogue. Nucleic Acids Res.,
27:3550–3556, 1999.
[283] Sergei Izrailev, Antony R. Crofts, Edward A. Berry, and Klaus Schulten. Steered molecular dynamics
simulation of the Rieske subunit motion in the cytochrome bc1 complex. Biophys. J., 77:1753–1768,
1999.
[284] Hui Lu, André Krammer, Barry Isralewitz, Viola Vogel, and Klaus Schulten. Computer modeling of
force-induced titin domain unfolding. In Jerry Pollack and Henk Granzier, editors, Elastic Filaments
of the Cell, chapter 1, pp. 143–162. Kluwer Academic/Plenum Publishers, New York, NY, 2000.
[285] Emad Tajkhorshid, Jerome Baudry, Klaus Schulten, and Sandor Suhai. Molecular dynamics study
of the nature and origin of retinal’s twisted structure in bacteriorhodopsin. Biophys. J., 78:683–693,
2000.
[286] Piotr E. Marszalek, Hui Lu, Hongbin Li, Mariano Carrion-Vazquez, Andres F. Oberhauser, Klaus
Schulten, and Julio M. Fernandez. Mechanical unfolding intermediates in titin modules. Nature,
402:100–103, 1999.
[287] Thorsten Ritz, Salih Adem, and Klaus Schulten. A model for photoreceptor-based magnetoreception
in birds. Biophys. J., 78:707–718, 2000.
[288] Ana Damjanović, Thorsten Ritz, and Klaus Schulten. Excitation energy trapping by the reaction
center of Rhodobacter sphaeroides. Int. J. Quantum Chem., 77:139–151, 2000.
[289] Christian Forst and Klaus Schulten. Evolution of metabolisms: A new method for the comparison of
metabolic pathways using genomics information. Journal of Computational Biology, 6:343–360, 1999.
[290] Alexander Balaeff, L. Mahadevan, and Klaus Schulten. Elastic rod model of a DNA loop in the lac
operon. Phys. Rev. Lett., 83:4900–4903, 1999.
[291] K. Moffat, J.-P. Changeux, D. M. Crothers, H. Grubmueller, G. U. Nienhaus, M. U. Palma, F. G.
Parak, K. Schulten, and A. Warshel. Group report: How does complexity lead to an apparently simple
function? In H. Frauenfelder, J. Deisenhofer, and P. G. Wolynes, editors, Simplicity and Complexity
in Proteins and Nucleic Acids, pp. 255–280, Berlin, 1999. Dahlem University Press.
[292] John Board and Klaus Schulten. The fast multipole algorithm. IEEE Comp. Sci. Eng., 2:56–59, 2000.
[293] Ferenc Molnar, Michal Ben-Nun, Todd J. Martínez, and Klaus Schulten. Characterization of a
conical intersection between the ground and first excited state for a retinal analog. J. Mol. Struc.
(THEOCHEM), WATOC special issue, 506:169–178, 2000.
[294] Rajeev Sharma, Michael Zeller, Vladimir I. Pavlovic, Thomas S. Huang, Zion Lo, Stephen Chu, Yunxin
Zhao, James C. Phillips, and Klaus Schulten. Speech/gesture interface to a visual-computing environment.
IEEE Comp. Graph. App., 20:29–37, 2000.
[295] Ferenc Molnar, Lawrence S. Norris, and Klaus Schulten. Simulated unbinding and binding of fatty
acid substrates in the cyclooxygenase site of prostaglandin H2 synthase-1. Progr. Reac. Kin. Mech.,
25:263–298, 2000.
[296] Ana Damjanović, Thorsten Ritz, and Klaus Schulten. Excitation transfer in the peridinin-chlorophyllprotein
of Amphidinium carterae. Biophys. J., 79:1695–1705, 2000.
[297] Klaus Schulten. Electron transfer: Exploiting thermal motion. Science, 290:61–62, 2000.
[298] Amit Kessel, Klaus Schulten, and Nir Ben-Tal. Calculations suggest a pathway for the transverse
diffusion of a hydrophobic peptide across a lipid bilayer. Biophys. J., 79:2322–2330, 2000.