23.12.2012 Views

Download - Carl Zeiss

Download - Carl Zeiss

Download - Carl Zeiss

SHOW MORE
SHOW LESS

You also want an ePaper? Increase the reach of your titles

YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.

<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

ZEISS Laser Microdissection • Publication List<br />

1 PALM MicroBeam<br />

1.1 DNA and RNA Research ................................................... 2<br />

1.2 Array Applications ........................................................... 78<br />

1.3 Proteomics ..................................................................... 89<br />

1.4 Live Cell Handling ........................................................... 96<br />

1.5 Reproductive Medicine ..................................................... 99<br />

1.6 Chromosomes .............................................................. 101<br />

1.7 Plant Research.............................................................. 105<br />

1.8 Forensics ..................................................................... 110<br />

1.9 Miscellaneous ............................................................... 112<br />

2 PALM MicroTweezers ............................................ 113<br />

Citations are sorted by alphabet.<br />

If you miss a publication or have questions on Laser Microdissection please contact<br />

labs@zeiss.de<br />

This publication list as well as further information on ZEISS Laser Microdissection can be found<br />

on http://www.zeiss.de/microdissection<br />

October 2012 1/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

1 PALM MicroBeam<br />

1.1 DNA and RNA Research<br />

Aaltonen KE, Ebbesson A, Wigerup C and Hedenfalk I<br />

Laser capture microdissection (LCM) and whole genome amplification (WGA) of DNA from<br />

normal breast tissue - optimization for genome wide array analyses.<br />

BMC Res Notes, 2011, 4,1: 69<br />

Aarts WM, Bende RJ, Bossenbroek JG, Pals ST and van Noesel CJM<br />

Variable heavy-chain gene analysis of follicular lymphomas: subclone selection rather than<br />

clonal evolution over time.<br />

Blood, 2001, 98,1: 238-240<br />

Aarts WM, Bende RJ, Vaandrager J-W, Kluin PM, Langerak AW, Pals ST and van Noesel CJM<br />

In situ analysis of the variable heavy chain gene of an IgM/IgG-expressing follicular<br />

lymphoma.<br />

Am J Pathol, 2002, 160,3: 883-891<br />

Adam AC, Faudou V, Paschen SA, Adam OM, Kahl P, Drebber U, Fischer HP, Büttner R.<br />

Hepatocarcinogenesis in non-cirrhotic liver is associated with a reduced number of clonal<br />

hepatocellular patches in non-tumorous liver parenchyma.<br />

J Pathol. 2012 Jun 11. doi: 10.1002/path.4060. PubMed<br />

Adam P, Schoof J, Hartmann M, Schwarz S, Puppe B, Ott M, Rosenwald A, Ott G and Müller-Hermelink HK<br />

Cell migration patterns and ongoing somatic mutations in the progression of follicular<br />

lymphoma.<br />

Cytogenet Genome Res, 2007, 118,2-4: 328-336<br />

Ahmed A<br />

The role of 11β-Hydroxysteroid dehydrogenase type 1 and hepatic glucocorticoid metabolism<br />

in the metabolic syndrome.<br />

Thesis, 2010<br />

Aida M, Irié T, Aida T and Tachikawa T<br />

Expression of protein kinases C ßI, ßII and VEGF during the differentiation of enamel<br />

epithelium in tooth development.<br />

J Dent Res, 2005, 84,3: 234-239<br />

Alanne MH, Siljamäki E, Peltonen S, Väänänen K, Windle JJ, Parada LF, Määttä JA, Peltonen J.<br />

Phenotypic characterization of transgenic mice harboring Nf1(+/-) or Nf1(-/-) osteoclasts in<br />

otherwise Nf1(+/+) background.<br />

J Cell Biochem. 2012 Feb 3. doi: 10.1002/jcb.24088. PubMed<br />

Alba A, Planas R, Clemente X, Carrillo J, Ampudia R, Puertas MC, Pastor X, Tolosa E, Pujol-Borrell R,<br />

Verdaguer J and Vives-Pi M<br />

Natural killer cells are required for accelerated type 1 diabetes driven by interferon-beta.<br />

Clin Exp Immunol, 2008, 151,3: 467-475<br />

Albrecht E, Gotoh T, Ebara F, Wegner J and Maak S<br />

Technical note: Determination of cell-specific gene expression in bovine skeletal muscle tissue<br />

using laser microdissection and reverse-transcription quantitative polymerase chain reaction.<br />

J Anim Sci, 2011, 89,12:4, 339-4343<br />

Albrecht A, Bergado-Acosta JR, Pape HC and Stork O<br />

Role of the neural cell adhesion molecule (NCAM) in amygdalo-hippocampal interactions and<br />

salience determination of contextual fear memory.<br />

Int J Neuropsychopharmacol, 2010, 13,5: 661-674<br />

October 2012 2/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Aleksic K, Lackner C, Geigl JB, Schwarz M, Auer M, Ulz P, Fischer M, Trajanoski Z, Otte M and Speicher<br />

MR<br />

Evolution of genomic instability in diethylnitrosamine-induced hepatocarcinogenesis in mice.<br />

Hepatology, 2011, 53,3: 895-904<br />

Alexander JK, DeVries AC, Kigerl KA, Dahlman JM and Popovich PG<br />

Stress exacerbates neuropathic pain via glucocorticoid and NMDA receptor activation.<br />

Brain Behav Immun, 2009, 23,6: 851-860<br />

Alvarez H, Corvalan A, Roa JC, Argani P, Murillo F, Edwards J, Beaty R, Feldmann G, Hong SM,<br />

Mullendore M, Roa I, Ibañez L, Pimentel F, Diaz A, Riggins GJ and Maitra A<br />

Serial analysis of gene expression identifies connective tissue growth factor expression as a<br />

prognostic biomarker in gallbladder cancer.<br />

Clin Cancer Res, 2008, 14,9: 2631-2638<br />

Amariglio N, Hirshberg A, Scheithauer BW, Cohen Y, Loewenthal R, Trakhtenbrot L, Paz N, Koren-<br />

Michowitz M, Waldman D, Leider-Trejo L, Toren A, Constantini S and Rechavi G<br />

Donor-derived brain tumor following neural stem cell transplantation in an ataxia<br />

telangiectasia patient.<br />

PLoS Med, 2009, 6,2: e1000029<br />

Andrade VP, Ostrovnaya I, Seshan VE, Morrogh M, Giri D, Olvera N, De Brot M, Morrow M, Begg CB, King<br />

TA.<br />

Clonal relatedness between lobular carcinoma in situ and synchronous malignant lesions.<br />

Breast Cancer Res. 2012 Jul 9;14(4):R103. PubMed<br />

Anoruo B, van Oorschot R, Mitchell J and Howells D<br />

Isolating cells from non-sperm cellular mixtures using the PALM microlaser microdissection<br />

system.<br />

Forensic Sci Int, 2007, 173,2-3: 93-96<br />

Arai C, Nomura Y, Ishikawa M, Noda K, Choi JW, Yashiro Y, Hanada N and Nakamura Y<br />

HSPA1A is upregulated in periodontal ligament at early stage of tooth movement in rats.<br />

Histochem Cell Biol, 2010, 134,4: 337-343<br />

Ardigó M, Borroni G, Muscardin L, Kerl H and Cerroni L<br />

Hypopigmented mycosis fungoides in Caucasian patients: A clinicopathologic study of 7 cases.<br />

J Am Acad Dermatol, 2003, 49,2: 264-270<br />

Arendt T and Ueberham U.<br />

Vectors containing an inducible gene encoding a CDK4/CDK6 inhibitor useful for treating<br />

neurodegenerative disorders or diseases associated with an unscheduled activation of the cell<br />

cycle.<br />

United States Patent Application Publication, 2012, PCT/EP100/00702<br />

Ásgeirsdóttir SA, Kamps JA, Bakker HI, Zwiers PJ, Heeringa P, van der Weide K, van Goor H, Petersen<br />

AH, Morselt H, Moorlag HE, Steenbergen E, Kallenberg CG and Molema G<br />

Site-specific inhibition of glomerulonephritis progression by targeted delivery of dexamethasone<br />

to glomerular endothelium.<br />

Mol Pharmacol, 2007, 72,1: 121-131<br />

Asplund A, Gry Björklund M, Sundquist C, Strömberg S, Edlund K, Östman A, Nilsson P, Pontén F and<br />

Lundeberg J<br />

Expression profiling of microdissected cell populations selected from basal cells in normal<br />

epidermis and basal cell carcinoma.<br />

Br J Dermatol, 2008, 158,3: 527-538<br />

Asplund A, Sivertsson Å, Bäckvall H, Ahmadian A, Lundeberg J and Ponten F<br />

Genetic mosaicism in basal cell carcinoma.<br />

Exp Dermatol, 2005, 14: 593-600<br />

Aubele MM, Cummings MC, Mattis AE, Zitzelsberger HF, Walch AK, Kremer M, Höfler H and Werner M<br />

Accumulation of chromosomal imbalances from intraductal proliferative lesions to adjacent in<br />

situ and invasive ductal breast cancer.<br />

Diagn Mol Pathol, 2000, 9,1: 14-19<br />

October 2012 3/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Aubele M, Cummings M, Walch A, Zitzelsberger H, Nahrig J, Höfler H and Werner M<br />

Heterogeneous chromosomal aberrations in intraductal breast lesions adjacent to invasive<br />

carcinoma.<br />

Anal Cell Pathol, 2000, 20,1: 17-24<br />

Aubele M, Mattis A, Zitzelsberger H, Walch A, Kremer M, Welzl G, Höfler H and Werner M<br />

Extensive ductal carcinoma in situ with small foci of invasive ductal carcinoma: evidence of<br />

genetic resemblance by CGH.<br />

Int J Cancer, 2000, 85: 82-86<br />

Aubele M, Zitzelsberger H, Schenck U, Walch A, Höfler H and Werner H<br />

Distinct cytogenetic alterations in squamous intraepithelial lesions of the cervix revealed by<br />

laser-assisted microdissection and comparative genomic hybridization.<br />

American Cancer Society, 1998, 84,6: 375-379<br />

Auf G, Jabouille A, Guérit S, Pineau R, Delugin M, Bouchecareilh M, Magnin N, Favereaux A, Maitre M,<br />

Gaiser T, von Deimling A, Czabanka M, Vajkoczy P, Chevet E, Bikfalvi A and Moenner M<br />

Inositol-requiring enzyme 1α is a key regulator of angiogenesis and invasion in malignant<br />

glioma.<br />

PNAS USA, 2010, 107,35: 15553-15558<br />

Axler-DiPerte G, Orans S, Singh A, Caragine T, Prinz M and Budimlja ZM<br />

Comparison and optimization of DNA recovery from sperm vs. epithelial cells using laser<br />

capture microdissection technology and an immunofluorescent staining system.<br />

For Sci Int: Gen Suppl Ser, in press<br />

Backholer K, Smith JT, Rao A, Pereira A, Iqbal J, Ogawa S, Li Q and Clarke IJ<br />

Kisspeptin cells in the ewe brain respond to leptin and communicate with neuropeptide Y and<br />

proopiomelanocortin cells.<br />

Endocrinology, 2010, 151,5: 2233-2243<br />

Bäckvall H, Asplund A, Gustafsson A, Sivertsson Å, Lundeberg J and Ponten F<br />

Genetic tumor archeology: microdissection and genetic heterogeneity in squamous and basal<br />

cell carcinoma.<br />

Mutat Res, 2005, 571,1-2: 65-79<br />

Bäckvall H, Strömberg S, Gustafsson A, Asplund A, Sivertsson Å, Lundeberg J and Ponten F<br />

Mutation spectra of epidermal p53 clones adjacent to basal cell carcinoma and squamous cell<br />

carcinoma.<br />

Exp Dermatol, 2004, 13,10: 643-640<br />

Baelde HJ, Eikmans M, Lappin DW, Doran PP, Hohenadel D, Brinkkoetter PT, van der Woude FJ, Waldherr<br />

R, Rabelink TJ, de Heer E and Bruijn JA<br />

Reduction of VEGF-A and CTGF expression in diabetic nephropathy is associated with podocyte<br />

loss.<br />

Kidney Int, 2007, 71,7: 637-645<br />

Bailey CM, Morrison JA, Kulesa PM.<br />

Melanoma revives an embryonic migration program to promote plasticity and invasion.<br />

Pigment Cell Melanoma Res. 2012 Sep;25(5):573-83. doi: 10.1111/j.1755-48X.2012.01025.x.<br />

PubMed<br />

Balogh Z, Reiniger L, Rajnai H, Csomor J, Szepesi A, Balogh A, Deák L, Gagyi E, Bödör C and Matolcsy A<br />

High rate of neoplastic cells with genetic abnormalities in proliferation centers of chronic<br />

lymphocytic leukemia.<br />

Leuk Lymphoma, 2011, 52,6: 1080-1084<br />

Bandapalli OR, Macher-Goeppinger S, Schirmacher P, Brand K.<br />

Paracrine signalling in colorectal liver metastases involving tumor cell-derived PDGF-C and<br />

hepatic stellate cell-derived PAK-2.<br />

Clin Exp Metastasis. 2012 Jun;29(5):409-17. PubMed PMID: 22362252. PubMed<br />

Bandapalli OR, Paul E, Schirmacher P, Brand K.<br />

Opposite effects of tissue inhibitor of metalloproteinases-1 (TIMP-1) over-expression and<br />

knockdown on colorectal liver metastases.<br />

BMC Res Notes, 2012, Jan 9;5:14. PubMed<br />

October 2012 4/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Bartel M, Hänsch GM, Giese T, Penzel R, Ceyhan G, Ketterer K, von Knebel-Döberitz M, Friess HM and<br />

Giese NA<br />

Abnormal crosstalk between pancreatic acini and macrophages during the clearance of<br />

apoptotic cells in chronic pancreatitis.<br />

J Pathol, 2008, 215,2: 195-203<br />

Barthelmann J, Nietsch J, Blessenohl M, Laskay T, van Zandbergen G, Westermann J, Kalies K.<br />

The protective Th1 response in mice is induced in the T-cell zone only three weeks after<br />

infection with Leishmania major and not during early T-cell activation.<br />

Med Microbiol Immunol. 2012 Feb;201(1):25-35. doi: 10.1007/s00430-011-0201-6. PubMed<br />

Bataille F, Rümmele P, Dietmaier W, Gaag D, Klebl F, Reichle A, Wild P, Hofstädter F and Hartmann A<br />

Alterations in p53 predict response to preoperative high dose chemotherapy in patients with<br />

gastric cancer.<br />

Mol Pathol, 2003, 56,5: 286-292<br />

Baurain JF, Colau D, van Baren N, Landry C, Martelange V, Vikkula M, Boon T and Coulie PG<br />

High frequency of autologous anti-melanoma CTL directed against an antigen generated by a<br />

point mutationion in a new helicase gene.<br />

J Immunol, 2000, 164: 6057-6066<br />

Bayliss J, Karasoulos T, McLean CA. Frequency and Large T (LT)<br />

Sequence of JC Polyomavirus DNA in oligodendrocytes, astrocytes and granular cells in non-<br />

PML brain.<br />

Brain Pathol, 2011, in press<br />

Bazan V, La Rocca G, Corsale S, Agnese V, Macaluso M, Migliavacca M, Gregorio V, Cascio S, Sisto PS, Di<br />

Fede G, Buscemi M, Fiorentino E, Passantino R, Morello V, Tomasino RM and Russo A<br />

Laser pressure catapulting (LPC): Optimization LPC-system and genotyping of colorectal<br />

carcinomas.<br />

J Cell Physiol, 2005, 2202,2: 503-509<br />

Becker AJ, Chen J, Paus S, Normann S, Beck H, Elger CE, Wiestler OD and Blümcke I<br />

Transcriptional profiling in human epilepsy: expression array and single cell real-time qRT-PCR<br />

analysis reveal distinct cellular gene regulation.<br />

Neuro Report, 2002, 13,10: 1327-1333<br />

Becker AJ, Urbach H, Scheffler B, Baden T, Normann S, Lahl R, Pannek HW, Tuxhorn I, Elger CE,<br />

Schramm J, Wiestler OD and Blümcke I<br />

Focal cortical dysplasia of Taylor’s balloon cell type. Mutational analysis of the TSC1 gene<br />

indicates a pathogenic relationship to tuberous sclerosis.<br />

Ann Neurol, 2002, 52,1: 29-37<br />

Becker B, Roesch A, Hafner C, Stolz W, Dugas M, Landthaler M and Vogt T<br />

Discrimination of melanocytic tumors by cDNA array hybridization of tissues prepared by Laser<br />

Pressure Catapulting.<br />

J Invest Dermatol, 2004, 122,2: 361-368<br />

Becker I, Becker KF, Röhrl MH and Höfler H<br />

Laser-assisted preparation of single cells from stained histological slides for gene analysis.<br />

Histochem Cell Biol, 1997, 108: 447-451<br />

Becker I, Becker KF, Röhrl MH, Minkus G, Schütze K and Höfler H<br />

Single-cell mutation analysis of tumors from stained histologic slides.<br />

Lab Invest, 1996, 75,6: 801-807<br />

Becker KF and Höfler H<br />

Advances in molecular pathology: Laser-based gene analysis.<br />

Boehringer Mannheim, PCR-Bibliographie, 1997, Kap 2<br />

Bedford L, Hay D, Devoy A, Paine S, Powe DG, Seth R, Gray T, Topham I, Fone K, Rezvani N, Mee M,<br />

Soane T, Layfield R, Sheppard PW, Ebendal T, Usoskin D, Lowe J and Mayer RJ<br />

Depletion of 26S proteasomes in mouse brain neurons causes neurodegeneration and Lewylike<br />

inclusions resembling human pale bodies.<br />

J Neurosci, 2008, 28,33: 8189-8198<br />

October 2012 5/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Beer M, Doepping S, Hildner M, Weber G, Grabner R, Hu D, Mohanta SK, Srikakulapu P, Weih F and<br />

Habenicht AJ<br />

Laser-capture microdissection of hyperlipidemic/ApoE⁻/⁻ mouse aorta atherosclerosis.<br />

Methods Mol Biol, 2011, 755: 417-428<br />

Bekker-Jensen S, Lukas C, Melander F, Bartek J and Lukas J<br />

Dynamic assembly and sustained retention of 53BP1 at the sites of DNA damage are controlled<br />

by Mdc1/NFBD1.<br />

J Cell Biol, 2005, 170,2: 201-211<br />

Bemark M, Bergqvist P, Stensson A, Holmberg A, Mattsson J, Lycke NY.<br />

A unique role of the cholera toxin A1-DD adjuvant for long-term plasma and memory B cell<br />

development.<br />

J Immunol. 2011 Feb 1;186(3):1399-410. PubMed<br />

Benchekroun M, DeGraw J, Gao J, Sun L, v Boguslawsky K, Leminen A, Andersson LC and Heiskala M<br />

Impact of fixative on recovery of mRNA from paraffin-embedded tissue.<br />

Diagn Mol Pathol, 2004, 13,2: 116-125<br />

Benschop CC, Wiebosch DC, Kloosterman AD and Sijen T<br />

Post-coital vaginal sampling with nylon flocked swabs improves DNA typing.<br />

Forensic Sci Int Genet, 2010, 4,2: 115-121<br />

Bentivegna S, Zheng J, Namsaraev E, <strong>Carl</strong>ton VE, Pavlicek A, Moorhead M, Siddiqui F, Wang Z, Lee L,<br />

Ireland JS, Suyenaga K, Willis TD, Faham M and Seymour AB<br />

Rapid identification of somatic mutations in colorectal and breast cancer tissues using<br />

mismatch repair detection (MRD).<br />

Hum Mutat, 2008, 29,3: 441-450<br />

Bentzon DN, Mortensen MM, Ørntoft T, Dyrskjøt L, Borre M.<br />

Expression profiling of hereditary versus sporadic prostate cancer suggests CYR61, EGR3,<br />

KLF6 and SNF1LK as differentially expressed genes.<br />

J Urol. 2012,2,55-66. doi:10.4236/oju.2012.22010<br />

Bernsen MR, Diepstra JHS, van Mil P, Punt CJA, Figdor CG, van Muijen GNP, Adema GJ and Ruiter DJ<br />

Presence and localization of T-cell subsets in relation to melanocyte differentiation antigen<br />

expression and tumour regression as assessed by immunohistochemisty and molecular<br />

analysis of microdissected T cells.<br />

J Pathol, 2004, 202: 70-79<br />

Bernsen MR, van Dijk MCRF, Diepstra JHS, Rombout PDM, Adema GJ, van Muijen NP and Ruiter DJ<br />

Nucleic acid extraction and preparation from microdissected tissues.<br />

J Mol Med, 2000, 78: B21-B22<br />

Bernsen MR, Dijkman HBPM, de Vries E, Figdor CG, Ruiter DJ, Adema GJ and van Muijen GNP<br />

Identification of multiple mRNA and DNA sequences from small tissue samples isolated by<br />

laser-assisted microdissection.<br />

Lab Invest, 1998, 78: 1267-1273<br />

Bertheau P, Plassa LF, Lerebours F, de Roquancourt A, Turpin E, Lidereau R, de Thé H and Janin A<br />

Allelic loss detection in inflammatory breast cancer: Improvement with Laser Microdissection.<br />

Lab Invest, 2001, 81,10: 1397-1402<br />

Berthet S, Demont-Caulet N, Pollet B, Bidzinski P, Cézard L, Le Bris P, Borrega N, Hervé J, Blondet E,<br />

Balzergue S, Lapierre C and Jouanin L<br />

Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of<br />

Arabidopsis thaliana stems.<br />

Plant Cell, 2011, 23,3: 1124-1137<br />

Bhanot U, Köhntop R, Hasel C and Möller P<br />

Evidence of Notch pathway activation in the ectatic ducts of chronic pancreatitis.<br />

J Pathol, 2008, 214,3: 312-319<br />

Bhanot U, Heydrich R, Möller P and Hasel C<br />

Surviving expression in pancreatic intraepithelial neoplasia (PanIM): steady increase along<br />

the developmental stages of pancreatic ductal adenocarcinoma.<br />

Am J Surg Pathol, 2006, 30,6: 754-759<br />

October 2012 6/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Bhasin M, Huang Z, Pradhan-Nabzdyk L, Malek JY, LoGerfo PJ, Contreras M, Guthrie P, Csizmadia E,<br />

Andersen N, Kocher O, Ferran C, LoGerfo FW.<br />

Temporal network based analysis of cell specific vein graft transcriptome defines key<br />

pathways and hub genes in implantation injury.<br />

PLoS One. 2012;7(6):e39123. PubMed PMID: 22720046; PubMed<br />

Bhonsle L.<br />

Characterization of potentially autoaggressive brain infiltrating CD8+ T cells in multiple<br />

sclerosis patients.<br />

Thesis, 2011 PubMed<br />

Billerey C, Chopin D, Aubriot-Lorton MH, Ricol D, de Medina SGD, van Rhijn Bas, Bralet MP, Lefrere-Belda<br />

MA, Lahaye JB, Abbou CC, Bonaventure J, Zafrani ES, van der Kwast T, Thiery JP and Radvanyi F<br />

Frequent FGFR3 mutations in papillary non-invasive bladder (pTa) tumors.<br />

Am J Pathol, 2001, 158: 1955-1959<br />

Binder MD, Cate HS, Prieto A, Kemper D, Butzkueven H, Gresle MM, Cipriani T, Jokubaitis VG, Carmeliet P<br />

and Kilpatrick TJ<br />

Gas6 deficiency increases oligodendrocyte loss and microglial activation in response to<br />

cuprizone-induced demyelination.<br />

J Neurosci, 2008, 28,20: 5195-5206<br />

Bitoun E, Finelli MJ, Oliver PL, Lee S and Davies KE<br />

AF4 is a critical regulator of the IGF-1 signaling pathway during Purkinje cell development.<br />

J Neurosci, 2009, 29,49: 15366-15374<br />

Blalock EM, Buechel HM, Popovic J, Geddes JW and Landfield PW<br />

Microarray analyses of laser-captured hippocampus reveal distinct gray and white matter<br />

signatures associated with incipient Alzheimer's disease.<br />

J Chem Neuroanat, 2011, 42,2: 118-126.<br />

Blaschke S, Koziolek M, Schwarz A, Benöhr P, Middel P, Schwarz G, Hummel K-M and Müller GA<br />

Proinflammatory role of fractalkine (CX3CL1) in rheumatoid arthritis.<br />

J Rheumatol, 2003, 30,9: 1918-1927<br />

Blöcher S, Fink L, Bohle RM, Bermann M and Steger K<br />

CREM activatior and repressor isoform expression in human male germ cells.<br />

Int J Androl, 2005, 28: 215-223<br />

Bobryshev YV, Tran D, Botelho NK, Lord RV and Orekhov AN<br />

Musashi-1 expression in atherosclerotic arteries and its relevance to the origin of arterial<br />

smooth muscle cells: histopathological findings and speculations.<br />

Atherosclerosis, 2011, 215,2: 355-365<br />

Bochmann L, Sarathchandra P, Mori F, Lara-Pezzi E, Lazzaro D and Rosenthal N<br />

Revealing new mouse epicardial cell markers through transcriptomics.<br />

PLoS One, 2010, 5,6: e11429<br />

Bock O, Loch G, Schade U, von Wasielewski R, Schlué J and Kreipe H<br />

Aberrant expression of transforming growth factor ß-1 (TGFß-1) per se does not discriminate<br />

fibrotic from non-fibrotic chronic myeloproliferative disorders.<br />

J Pathol, 2005, 205,5: 548-557<br />

Bock O, Schlué J, Mengel M, Büsche G, Serinsöz E and Kreipe H<br />

Thrombopoietin receptor (MpI) expression by megakaryocytes in myeloproliferative disorders.<br />

J Pathol, 2004, 203: 609-615<br />

Bock, O, Neusch M, Büsche G, Mengel M and Kreipe H<br />

Constitutive expression of the FK506 binding protein 51 (FKBP51) in bone marrow cells and<br />

megakaryocytes derived from idiopathic myelofibrosis and non-neoplastic haematopoiesis.<br />

Eur J Haematol, 2004, 72,4: 239-244<br />

Boelens MC, Gustafson AM, Postma DS, Kok K, van der Vries G, van der Vlies P, Spira A, Lenburg ME,<br />

Geerlings M, Sietsma H, Timens W, van den Berg A and Groen HJ<br />

A chronic obstructive pulmonary disease related signature in squamous cell lung cancer.<br />

Lung Cancer, 2011, 72,2: 177-183<br />

October 2012 7/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Boelens MC, Te Meerman GJ, Gibcus JH, Blokzijl T, Boezen HM, Timens W, Postma DS, Groen HJ and van<br />

den Berg A<br />

Microarray amplification bias: loss of 30% differentially expressed genes due to long probe -<br />

poly(A)-tail distances.<br />

BMC Genomics, 2007, 8,1: 277<br />

Böhm M, Wieland I, Schütze K and Rübben H<br />

Microbeam-MOMeNT: non-contact laser microdissection of membrane mounted native tissue.<br />

Am J Pathol, 1997, 151: 63-67<br />

Bösmüller H, Kranewitter W, Webersinke G, Rumpold H, Hackl M and Fend F<br />

Morphological and molecular heterogeneity in colorectal neoplasms with K-RAS mutation. A<br />

report of two cases.<br />

Pathol Res Pract, 2011, 207(6): 399-402<br />

Boettger MB, Sergi C and Meyer P<br />

BRCAI/2 mutations screening and LOH analysis of lung adenocarcinoma tissue in a multiplecancer<br />

patient with a strong family history of breast cancer.<br />

J Carcinog, 2003, 2,1: 5<br />

Bonarius HP, Brandsma CA, Kerstjens HA, Koerts JA, Kerkhof M, Nizankowska-Mogilnicka E, Roozendaal<br />

C, Postma DS, Timens W.<br />

Antinuclear autoantibodies are more prevalent in COPD in association with low body mass<br />

index but not with smoking history.<br />

Thorax. 2011 Feb;66(2):101-7. Epub 2010 Nov 3. PubMed<br />

Borisjuk L, Rolletschek H, Neuberger T.<br />

Surveying the plant's world by magnetic resonance imaging.<br />

Plant J. 2012 Apr;70(1):129-46. doi: 10.1111/j.1365-313X.2012.04927.x. PubMed<br />

Boyd LK, Mao X, Xue L, Lin D, Chaplin T, Kudahetti SC, Stankiewicz E, Yu Y, Beltran L, Shaw G, Hines J,<br />

Oliver RT, Berney DM, Young BD, Lu YJ.<br />

High-resolution genome-wide copy-number analysis suggests a monoclonal origin of<br />

multifocal prostate cancer.<br />

Genes Chromosomes Cancer. 2012 Feb 15. doi: 10.1002/gcc.21944. PubMed<br />

Botia B, Jolivel V, Burel D, Le Joncour V, Roy V, Naassila M, Bénard M, Fournier A, Vaudry H, Vaudry D.<br />

Neuroprotective effects of PACAP against ethanol-induced toxicity in the developing rat<br />

cerebellum.<br />

Neurotox Res, 2011, 19,3: 423-434<br />

Böttner M, Bär F, von Koschitzky H, Tafazzoli K, Roblick UJ, Bruch HP and Wedel T<br />

Laser microdissection as a new tool to investigate site-specific gene expression in enteric<br />

ganglia of the human intestine.<br />

Neurogastroenterol Motil, 2009, 22,2: 168-172<br />

Bohle RM, Hartmann E, Kinfe T, Ermert L, Seeger W and Fink L<br />

Cell-type specific mRNA quantitation in non-neoplastic tissues after laser-assisted cell picking.<br />

Pathobiology, 2000, 68: 191-195<br />

Boltze C, Schneider-Stock R, Quednow C, Hinze R, Mawrin C, Hribaschek A, Roessner A and Hoang-Vu C<br />

Silencing of the maspin gene by promoter hypermethylation in thyroid cancer.<br />

Int J Mol Med, 2003, 12: 479-484<br />

Boltze C, Zack S, Quednow C, Bettge S, Roessner A and Schneider-Stock R<br />

Hypermethylation of the CDKN2/p16 INK4A promotor in thyroid carcinogenesis.<br />

Path Res Pract, 2003, 199: 399-404<br />

Bonarius HP, Brandsma CA, Kerstjens HA, Koerts JA, Kerkhof M, Nizankowska-Mogilnicka E, Roozendaal<br />

C, Postma DS and Timens W<br />

Antinuclear autoantibodies are more prevalent in COPD in association with low body mass<br />

index but not with smoking history.<br />

Thorax, 2010, in press<br />

Booij JC, ten Brink JB, Swagemakers SM, Verkerk AJ, Essing AH, van der Spek PJ and Bergen AA<br />

A new strategy to identify and annotate human RPE-specific gene expression.<br />

PLoS One, 2010, 5,3: e9341<br />

October 2012 8/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Bothe MK, Braun J, Mundhenk L and Gruber AD<br />

Murine mCLCA6 is an integral apical membrane protein of non-goblet cell enterocytes and colocalizes<br />

with the Cystic Fibrosis transmembrane conductance regulator.<br />

J Histochem Cytochem, 2008, 56,5: 495-509<br />

Bowen C and Gelmann EP<br />

NKX3.1 activates cellular response to DNA damage.<br />

Cancer Res, 2010, 70,8: 3089-3097<br />

Boy SC, van Heerden MB, Wolfaardt M, Cockeran R, Gema E and van Heerden WF<br />

An investigation of the role of oral epithelial cells and Langerhans cells as possible HIV viral<br />

reservoirs.<br />

J Oral Pathol Med, 2009, 38,1: 114-119<br />

Boyd LK, Mao X, Xue L, Lin D, Chaplin T, Kudahetti SC, Stankiewicz E, Yu Y, Beltran L, Shaw G, Hines J,<br />

Oliver RT, Berney DM, Young BD, Lu YJ.<br />

High-resolution genome-wide copy-number analysis suggests a monoclonal origin of<br />

multifocal prostate cancer.<br />

Genes Chromosomes Cancer. 2012 Jun;51(6):579-89. doi: 10.1002/gcc.21944. PubMed<br />

Braun J, Bothe MK, Mundhenk L, Beck CL and Gruber AD<br />

Murine mCLCA5 is expressed in granular layer keratinocytes of stratified epithelia.<br />

Histochem Cell Biol, 2010, 133,3: 285-299<br />

Brierley SM, Castro J, Harrington AM, Hughes PA, Page AJ, Rychkov GY and Blackshaw LA<br />

TRPA1 contributes to specific mechanically activated currents and sensory neuron mechanical<br />

hypersensitivity.<br />

J Physiol, 2011, 589: 3575-3593<br />

Brierley SM, Page AJ, Hughes PA, Adam B, Liebregts T, Cooper NJ, Holtmann G, Liedtke W, Blackshaw LA<br />

Selective role for TRPV4 ion channels in visceral sensory pathways.<br />

Gastroenterology, 2008, 134,7: 2059-2069<br />

Brinch M, Hatt L, Singh R, Møller K, Sommer S, Uldbjerg N, Christensen B, Kølvraa S.<br />

Identification of circulating fetal cell markers by microarray analysis.<br />

Prenat Diagn. 2012 Aug;32(8):742-51. doi: 10.1002/pd.3894 PubMed<br />

Brinkmann H and Curry JA<br />

Laser microdissection and pressure catapulting: combining LMPC with IHC to investigate<br />

NMDA receptor subunit composition.<br />

J Neurosci Methods, 2010, 187,2: 167-170<br />

Briski KP, Cherion A, Genabai NK and Vavaiya KV<br />

In situ coexpression of glucose and monocarboxylate transporter mRNAs in metabolicsensitive<br />

caudal dorsal vagal complex catecholaminergic neurons: transcriptional reactivity to<br />

insulin-induced hypoglycemia (IIH) and caudal hindbrain glucose or lactate repletion during<br />

IH.<br />

Neuroscience, 2009, 164,3: 1152-1160<br />

Brosnahan ML, Kulis DM, Solow AR, Erdner DL, Percy L, Lewis J and Anderson DM<br />

Outbreeding lethality between toxic group I and nontoxic group III Alexandrium Tamarense<br />

spp. isolates: predominance of heterotypic encystment and implications for mating<br />

interactions and biogeography.<br />

Deep-Sea Research, 2009, in press<br />

Brown AL and Smith DW<br />

Improved RNA preservation for immunolabeling and laser microdissection.<br />

RNA, 2009, 15,12: 2364-2374<br />

Brücher BL, Keller G, Werner M, Müller U, Lassmann S, Cabras AD, Fend F, Busch R, Stein H, Allescher<br />

HD, Molls M, Siewert JR, Höfler H and Specht K<br />

Using Q-RT-PCR to measure cyclin D1, TS, TP, DPD, and Her-2/neu as predictors for response,<br />

survival, and recurrence in patients with esophageal squamous cell carcinoma following<br />

radiochemotherapy.<br />

Int J Colorectal Dis, 2009, 24,1: 69-77<br />

October 2012 9/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Buchner A, Castro M, Hennig A, Popp T, Assmann G, Stief CG and Zimmermann W<br />

Downregulation of HNF-1B in renal cell carcinoma is associated with tumor progression and<br />

poor prognosis.<br />

Urology, 2010, 76,2: 507<br />

Buchner A, Castro M, Hennig A, Popp T, Assmann G, Hofstetter A, Stief C and Zimmermann W<br />

Transcriptome analyses in renal cell carcinoma : Combination of laser microdissection and<br />

microarrays.<br />

Urologe A, 2007, 46,9: 1170-1175<br />

Buerger H, Gebhardt F, Schmidt H, Beckmann A, Hutmacher K, Simon R, Lelle R, Böcker W and Brandt B<br />

Length and loss of heterozygosity of an intron 1 polymorphic sequence of egfr is related to<br />

cytogenetic alterations and epithelial growth factor receptor expression.<br />

Cancer Research, 2000, 60,4: 854-857<br />

Buerger H, Simon R, Schafer KL, Diallo R, Littmann R, Poremba C, van Diest PJ, Dockhorm-Dworniczak B<br />

and Boecker W<br />

Genetic relation of lobular carcinoma in situ, ductal carcinoma in situ, and associated invasive<br />

carcinoma of the breast.<br />

Mol Pathol, 2000, 53, 3: 118-121<br />

Burgemeister R<br />

Nucleic acids extraction from laser microdissected FFPE tissue sections.<br />

Methods Mol Biol, 2011, 724: 117-129<br />

Burgemeister R<br />

Laser Capture Microdissection of FFPE tissue sections bridging the gap between microscopy<br />

and molecular analysis.<br />

Methods Mol Biol, 2011, 724: 105-115<br />

Burgemeister R, Hitzler H, Hoyer C and Ankerhold R<br />

Noncontact laser microdissection: a new dimension in life sciences.<br />

Nature Methods, 2006, Applic. Notes<br />

Burgemeister R<br />

New aspects of laser microdissection in research and routine.<br />

J Histochem Cytochem, 2005, 53,3: 409-412<br />

Burgemeister R, Gangnus R, Haar B, Schütze K and Sauer U<br />

High quality RNA retrieved from samples obtained by using LMPC (Laser Microdissection and<br />

Pressure Catapulting) technology.<br />

Pathol Res Pract , 2003, 199: 431-436<br />

Burgemeister R, Schütze K, Minderer S and Gloning K-Ph<br />

Single fetal cells separated by the Laser MicroBeam technique.<br />

BIOforum Int, 1999, 3: 119-121<br />

Burnet PWJ, Eastwood SL and Harrison PJ<br />

Laser-assisted microdissection: Methods for the molecular analysis of psychiatric disorders at<br />

a cellular resolution.<br />

Biol Psychiatry, 2004, 55: 107-111<br />

Caiazzo M, Dell'Anno MT, Dvoretskova E, Lazarevic D, Taverna S, Leo D, Sotnikova TD, Menegon A,<br />

Roncaglia P, Colciago G, Russo G, Carninci P, Pezzoli G, Gainetdinov RR, Gustincich S, Dityatev A,<br />

Broccoli V.<br />

Direct generation of functional dopaminergic neurons from mouse and human fibroblasts.<br />

Nature. 2011 Jul 3;476(7359):224-7. doi: 10.1038/nature10284. PubMed<br />

Calzada-Wack J, Kappler R, Schnitzbauer U, Richter T, Nathrath M, Rosemann M, Wagner SN, Hein R and<br />

Hahn H<br />

Unbalanced overexpression of the mutant allele in murine Patched mutants.<br />

Carcinogenesis, 2002, 23,5: 727-734<br />

Cantz T, Jochheim A, Cieslak A, Hillemann T, Scharf J, Manns MP and Ott M<br />

PCR-based quantification of amplified RNA from laser microdissected mouse liver samples.<br />

Exp Mol Pathol, 2003, 75,1: 53-57<br />

October 2012 10/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Cantz T, Zuckerman DM, Burda MR, Dandri M, Göricke B, Thalhammer S, Heckl WM, Manns MP, Petersen<br />

J and Ott M<br />

Quantitative gene expression analysis reveals transition of fetal liver progenitor cells to<br />

mature hepatocytes after transplantation in uPA/RAG-2 mice.<br />

Am J Pathol, 2003, 162,1: 37-45<br />

Cañueto J, Santos-Briz A, García JL, Robledo C and Unamuno P<br />

Onychomatricoma: Genome-wide analyses of a rare nail matrix tumor.<br />

J Am Acad Dermatol, 2010, in press<br />

Cappuzzo F, Hirsch FR, Rossi E, Bartolini S, Ceresoli GL, Bemis L, Haney J, Witta S, Danenberg K,<br />

Domenichini I, Ludovini V, Magrini E, Gregorc V, Doglioni C, Sidoni A, Tonato M, Frankin WA, Crino L,<br />

Bunn PA and Varella-Garcia M<br />

Epidermal growth factor receptor gene and protein and gefitinib sensitivity in non-small-cell<br />

lung cancer.<br />

J Natl Cancer Inst, 2005, 97,9: 643-655<br />

Cardoso J, Molenaar L, de Menezes RX, Rosenberg C, Morreau H, Möslein G, Fodde R and Boer JM<br />

Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH.<br />

Nucleic Acids Res, 2004, 32,19: e146<br />

Carvalho LV, Pereira EM, Frappart L, Boniol M, Bernardo WM, Tarricone V, Tavtigian S and Southey MC<br />

Molecular characterization of breast cancer in young Brazilian women.<br />

Rev Assoc Med Bras, 2010, 56,3: 278-287<br />

Casimiro S, Luis I, Fernandes A, Pires R, Pinto A, Gouveia AG, Francisco AF, Portela J, Correia L, Costa L.<br />

Analysis of a bone metastasis gene expression signature in patients with bone metastasis<br />

from solid tumors.<br />

Clin Exp Metastasis. 2012 Feb;29(2):155-64. doi: 10.1007/s10585-011-9438-0. PubMed<br />

Cermelli C, Berti R, Soldan SS, Mayne M, D’ambrosia JM. Ludwin SK and Jacobson S<br />

High frequency of Human Herpesvirus 6 DNA in Multiple Sclerosis plaques isolated by laser<br />

microdissection.<br />

J Infect Dis, 2003, 187,9: 1377-1387<br />

Cernohorska H, Kubickova S, Vahala J, Rubes J.<br />

Molecular Insights into X;BTA5 Chromosome Rearrangements in the Tribe Antilopini<br />

(Bovidae).<br />

Cytogenet Genome Res. 2012 Feb 11. [Epub ahead of print] PubMed<br />

Cernohorska H, Kubickova S, Vahala J, Robinson TJ and Rubes J<br />

Cytotypes of Kirk's dik-dik (Madoqua kirkii,Bovidae) show multiple tandem fusions.<br />

Cytogenet Genome Res, 2011, 132,4: 255-263<br />

Cerroni L, Arzberger E, Putz B, Hofler G, Metze D, Sander CA, Rose C, Wolf P, Rutten A, McNiff JM and<br />

Kerl H<br />

Primary cutaneous follicle center cell lymphoma with follicular growth pattern.<br />

Blood, 2000, 95,12: 3922-3928<br />

Cerroni L, Arzberger E, Ardigó M, Pütz B and Kerl H<br />

Monoclonality of intraepidermal T lymphocytes in early mycosis fungoides detected by<br />

molecular analysis after laser-beam based microdissection.<br />

J Invest Dermatol, 2000, 114: 1154-1157<br />

Cerroni L, Minkus G, Pütz B, Höfler H and Kerl H<br />

Laser-beam microdissection in the diagnosis of cutaneous B-cell lymphoma.<br />

Br J Dermatol, 1997, 136: 743-746<br />

Chadi G, Maximino JR and de Oliveira GP<br />

The importance of molecular histology to study glial influence on neurodegenerative disorders.<br />

Focus on recent developed single cell laser microdissection.<br />

J Mol Histol, 2009, 40,4: 241-250<br />

Chalastanis A, Penard-Lacronique V, Svrcek M, Defaweux V, Antoine N, Buhard O, Dumont S, Fabiani B,<br />

Renault I, Tubacher E, Fléjou JF, te Riele H, Duval A and Muleris M<br />

Azathioprine-induced carcinogenesis in mice according to Msh2 genotype.<br />

J Natl Cancer Inst, 2010, 102,22: 1731-1740<br />

October 2012 11/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Chan RW, Lai FM, Li EK, Tam LS, Chow KM, Lai KB, Li PK and Szeto CC<br />

Intra-renal cytokine gene expression in lupus nephritis.<br />

Ann Rheum Dis, 2007, 66,7: 886-892<br />

Chand AL, Murray AS, Jones RL, Hannan NJ, Salamonsen LA and Rombauts L<br />

Laser capture microdissection and cDNA array analysis of endometrium identify CCL16 and<br />

CCL21 as epithelial-derived inflammatory mediators associated with endometriosis.<br />

Reprod Biol Endocrinol, 2007, 5: 18<br />

Chang Q, Pang JC, Li J, Hu L, Kong X and NG H<br />

Molecular analysis of PinXI in medulloblastomas.<br />

Int J Cancer, 2004, 109: 309-314<br />

Chen Q, Zhang H, Li Q, An Y, Herkenham M, Lai W, Popovich P, Agarwal S and Quan N<br />

Three promoters regulate tissue- and cell type-specific expression of murine interleukin-1<br />

receptor type I.<br />

J Biol Chem, 2009, 284,13: 8703-8713<br />

Chen D, Livne-bar I, Vanderluit JL, Slack RS, Agochiya M and Bremner R<br />

Cell-specific effects of RB or RB/p107 loss on retinal development implicate an intrinsically<br />

death-resistant cell-of-origin in retinoblastoma.<br />

Cancer Cell, 2004, 5: 539-551<br />

Chen Y, Sharp PM, Fowkes M, Kocher O, Joseph JT and Koralnik IJ<br />

Analysis of 15 novel full-length BK virus sequences from three individuals: evidence of a high<br />

intra-strain genetic diversity.<br />

J Gen Virol, 2004, 85: 2651-2663<br />

Chen Z, Gu S, Trojanowicz B, Liu N, Zhu G, Dralle H and Hoang-Vu C<br />

Down-regulation of TM4SF is associated with the metastatic potential of gastric carcinoma<br />

TM4SF members in gastric carcinoma.<br />

World J Surg Oncol, 2011, 9: 43<br />

Cherian AK, Briski KP.<br />

A2 noradrenergic nerve cell metabolic transducer and nutrient transporter adaptation to<br />

hypoglycemia: impact of estrogen.<br />

J Neurosci Res. 2012 Jul;90(7):1347-58. doi: 10.1002/jnr.23032. PubMed<br />

Chevronnay HPG, Lemoine P, Courtoy PJ, Marbaix E and Henriet P<br />

Ovarian steroids, mitogen-activated protein kinases, and/or aspartic proteinases cooperate to<br />

control endometrial remodeling by regulating gene expression in the stroma and glands.<br />

Endocrinology, 2010, 151,9: 4515-4526<br />

Chevronnay HPG, Galant C, Lemoine P, Courtoy PJ, Marbaix E and Henriet P<br />

Spatiotemporal coupling of focal extracellular matrix degradation and reconstruction in the<br />

menstrual human endometrium.<br />

Endocrinology, 2009, 150,11: 5094-5105<br />

Chevronnay GHP, Cornet PB, Delvaux D, Lemoine P, Courtoy PJ, Henriet P and Marbaix E<br />

Opposite regulation of transforming growth factors-beta2 and -beta3 expression in the human<br />

endometrium.<br />

Endocrinology, 2008, 149,3: 1015-1025<br />

Chokechanachaisakul U, Kaneko T, Okiji T, Kaneko R, Suda H and Nör JE<br />

Laser capture microdissection in dentistry.<br />

Int J Dent, 2010, in press<br />

Chong HC, Tan MJ, Philippe V, Tan SH, Tan CK, Ku CW, Goh YY, Wahli W, Michalik L and Tan NS<br />

Regulation of epithelial-mesenchymal IL-1 signaling by PPARβ/δ is essential for skin homeostasis<br />

and wound healing.<br />

J Cell Biol, 2009, 184,6: 817-831<br />

Choolani M, Mahyuddin AP, Hahn S.<br />

The promise of fetal cells in maternal blood.<br />

Best Pract Res Clin Obstet Gynaecol. 2012 Oct;26(5):655-67. PubMed<br />

October 2012 12/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Chou DM, Adamson B, Dephoure NE, Tan X, Nottke AC, Hurov KE, Gygi SP, Colaiácovo MP and Elledge SJ<br />

A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the<br />

repressive polycomb and NuRD complexes to sites of DNA damage.<br />

PNAS USA, 2010, 107,43: 18475-18480<br />

Choy KW, Lee TC, Cheung KF, Fan DSP, Lo KW, Beaverson KL, Abramson DH, Lam DSC, Yu CBO and<br />

Pang CP<br />

Clinical implications of promoter hypermethylation in RASSF1A and MGMT in retinoblastoma.<br />

Neoplasia, 2005, 7,3: 200-206<br />

Christensen B, Kolvraa S, Eckelt A, Brich M, Singh R and Hatt L.<br />

Enrichment and identification of fetal cells in maternal blood and ligands for such use.<br />

United States Patent Application Publication, 2012, PCT/DK10/50002<br />

Chua CO, Vinukonda G, Hu F, Labinskyy N, Zia MT, Pinto J, Csiszar A, Ungvari Z and Ballabh P<br />

Effect of hyperoxic resuscitation on propensity of germinal matrix haemorrhage and cerebral<br />

injury.<br />

Neuropathol Appl Neurobiol, 2010, 36,5: 448-458<br />

Churchill MJ, Wesselingh SL, Cowley D, Pardo CA, McArthur JC, Brew BJ and Gorry PR<br />

Extensive astrocyte infection is prominent in human immunodeficiency virus-associated<br />

dementia.<br />

Ann Neurol, 2009, 66,2: 253-258<br />

Cipponi A, Mercier M, Seremet T, Baurain JF, Théate I, van den Oord J, Stas M, Boon T, Coulie PG, van<br />

Baren N.<br />

Neogenesis of Lymphoid Structures and Antibody Responses Occur in Human Melanoma<br />

Metastases.<br />

Cancer Res. 2012 Aug 15;72(16):3997-4007. PubMed<br />

Cismasiu VB, Radu E and Popescu LM<br />

miR-193 expression differentiates telocytes from other stromal cells.<br />

J Cell Mol Med, 2011, 15,5: 1071-1074<br />

Clements SE, Techanukul T, Lai-Cheong JE, Mee JB, South AP, Pourreyron C, Burrows NP, Mellerio JE,<br />

McGrath JA.<br />

Mutations in AEC syndrome skin reveal a role for p63 in basement membrane adhesion, skin<br />

barrier integrity and hair follicle biology.<br />

Br J Dermatol. 2012 Feb 13. doi: 10.1111/j.1365-2133.2012.10888.x. PubMed<br />

Cohen Y, Shalmon B, Korach J, Barshack I, Fridman E and Rechavi G<br />

AKT1 pleckstrin homology domain E17K activating mutation in endometrial carcinoma.<br />

Gynecol Oncol, 2010, 116,1: 88-91<br />

Cohen CD, Gröne H-J, Gröne EF, Nelson PJ, Schlöndorff D and Kretzler M<br />

Laser microdissection and gene expression analysis on formaldehyde-fixed archival tissue.<br />

Kidney Int, 2002, 61: 125-132<br />

Cooper J<br />

Laser Microdissection for research into the molecular neuropathology of Batten disease.<br />

Microsc Anal, 2006, 20,5: 11-12<br />

Coulbault L, Herlicoviez D, Chapon F, Read MH, Penniello MJ, Reynier P, Fayet G, Lombès A, Jauzac P,<br />

and Allouche S<br />

A novel mutation in the mitochondrial tRNA Asn gene associated with a lethal disease.<br />

Biochem Biophys Res Commun. 2005, 329,3: 1152-1154<br />

Cox ME, Gleave ME, Zakikhani M, Bell RH, Piura E, Vickers E, Cunningham M, Larsson O, Fazli L and<br />

Pollak M<br />

Insulin receptor expression by human prostate cancers.<br />

Prostate, 2009, 69,1: 33-40<br />

Cummings M, McGinley CV, Wilkinson N, Field SL, Duffy SR and Orsi NM<br />

A robust RNA integrity-preserving staining protocol for laser capture microdissection of<br />

endometrial cancer tissue.<br />

Anal Biochem, 2011, 416(1): 123-125<br />

October 2012 13/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Cuthbert RJ, Wilson JM, Scott N, Coletta PL and Hull MA<br />

Differential CD74 (major histocompatibility complex Class II invariant chain) expression in<br />

mouse and human intestinal adenomas.<br />

Eur J Cancer, 2009, 45,9: 1654-1663<br />

D'Addario G, Rauch D, Stupp R, Pless M, Stahel R, Mach N, Jost L, Widmer L, Tapia C, Bihl M, Mayer M,<br />

Ribi K, Lerch S, Bubendorf L and Betticher DC<br />

Multicenter phase II trial of gefitinib first-line therapy followed by chemotherapy in advanced<br />

non-small-cell lung cancer (NSCLC): SAKK protocol 19/03.<br />

Ann Oncol, 2008, 19,4: 739-745<br />

Dahse R and Kosmehl H<br />

Cell separation and gene expression analysis in a tumor-stroma interaction model.<br />

Image Anal Stereol, 2004, 23: 153-157<br />

Dahse R, Berndt A, Haas KM, Hyckel P, Böhmer FD, Claussen U and Kosmehl H<br />

Laser capture microdissection in 2-D co-culture models as a tool to study tumor-stroma<br />

intractions.<br />

BioTechniques, 2002, 33,3: 474-475<br />

Dahse R, Berndt A and Kosmehl H<br />

Total RNA-based target design for microarray analysis of defined tumor areas.<br />

BioTechniques, 2002, 32,4: 744-748<br />

Dalke C, Hölzlwimmer G, Calzada-Wack J, Quintanilla-Martinez L, Atkinson MJ, Rosemann M.<br />

Differences in the Susceptibility to Iodine131-induced Thyroid Tumours<br />

amongst Inbred Mouse Strains.<br />

J Radiat Res. 2012 Jun 1;53(3):343-52. PubMed<br />

Damiani I, Baldacci-Cresp F, Hopkins J, Andrio E, Balzergue S, Lecomte P, Puppo A, Abad P, Favery B,<br />

Hérouart D.<br />

Plant genes involved in harbouring symbiotic rhizobia or pathogenic nematodes.<br />

New Phytol. 2012 Apr;194(2):511-22. doi: 10.1111/j.1469-8137.2011.04046.x. PubMed<br />

Danielsson K, Wahlin YB, Gu X, Boldrup L, Nylander K.<br />

Altered expression of miR-21, miR-125b, and miR-203 indicates a role for these microRNAs in<br />

oral lichen planus.<br />

J Oral Pathol Med. 2012 Jan;41(1):90-5. doi: 10.1111/j.1600-0714.2011.01084.x. PubMed<br />

Datson NA, Speksnijder N, Mayer JL, Steenbergen PJ, Korobko O, Goeman J, de Kloet ER, Joëls M,<br />

Lucassen PJ.<br />

The transcriptional response to chronic stress and glucocorticoid receptor blockade in the<br />

hippocampal dentate gyrus.<br />

Hippocampus. 2012 Feb;22(2):359-71. doi: 10.1002/hipo.20905. PubMed<br />

Datson NA, Speksnijder N, de Jong IE, Steenbergen PJ, Vielsted Christensen K, Potempa K, Torleif<br />

Pedersen J, Egebjerg J, Kallunki P, Nielsen EB, de Kloet ER and Didriksen M<br />

Hippocampal CA1 region shows differential regulation of gene expression in mice displaying<br />

extremes in behavioral sensitization to amphetamine: relevance for psychosis susceptibility?<br />

Psychopharmacology, 2011: in press<br />

Datson NA, Morsink MC, Steenbergen PJ, Aubert Y, Schlumbohm C, Fuchs E and de Kloet ER<br />

A molecular blueprint of gene expression in hippocampal subregions CA1, CA3, and DG is<br />

conserved in the brain of the common marmoset.<br />

Hippocampus, 2009, 19,8: 739-752<br />

Davalos V, Moutinho C, Villanueva A, Boque R, Silva P, Carneiro F and Esteller M<br />

Dynamic epigenetic regulation of the microRNA-200 family mediates epithelial and<br />

mesenchymal transitions in human tumorigenesis.<br />

Oncogene, 2011, in press, doi:10.1038/onc.2011.383<br />

Deane R, Singh I, Sagare AP, Bell RD, Ross NT, LaRue B, Love R, Perry S, Paquette N, Deane RJ,<br />

Thiyagarajan M, Zarcone T, Fritz G, Friedman AE, Miller BL, Zlokovic BV.<br />

A multimodal RAGE-specific inhibitor reduces amyloid β-mediated brain disorder in a mouse<br />

model of Alzheimer disease.<br />

J Clin Invest. 2012 Apr 2;122(4):1377-92. doi: 10.1172/JCI58642. PubMed<br />

October 2012 14/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

de Bekker C, van Veluw GJ, Vinck A, Wiebenga LA and Wösten HA<br />

Heterogeneity of Aspergillus niger microcolonies in liquid shaken cultures.<br />

Appl Environ Microbiol, 2011, 77,4: 1263-1267<br />

Deeken R, Ache P, Kajahn I, Klinkenberg J, Bringmann G and Hedrich R<br />

Identification of Arabidopsis thaliana phloem RNAs provides a search criterion for phloembased<br />

transcripts hidden in complex datasets of microarray experiments.<br />

Plant J, 2008, 55,5: 746-759<br />

De Hertogh G, Lemmens B, Verhasselt P, de Hoogt R, Sagaert X, Joossens M, Van Assche G, Rutgeerts P,<br />

Vermeire S, Aerssens J.<br />

Assessment of the microbiota in microdissected tissues of Crohn's disease patients.<br />

Int J Inflam. 2012; 505674. PubMed<br />

Delgado-Calle J, Sañudo C, Bolado A, Fernández AF, Arozamena J, Pascual-Carra MA, Rodriguez-Rey JC,<br />

Fraga MF, Bonewald L, Riancho JA.<br />

DNA methylation contributes to the regulation of sclerostin expression in human osteocytes.<br />

J Bone Miner Res. 2012 Apr;27(4):926-37. doi: 10.1002/jbmr.1491. PubMed<br />

Delgado-Calle J, Sañudo C, Sánchez-Verde L, García-Renedo RJ, Arozamena J and Riancho JA<br />

Epigenetic regulation of alkaline phosphatase in human cells of the osteoblastic lineage.<br />

Bone, 2011, 49,4: 830-838<br />

Demir O, Aysit N, Onder Z, Turkel N, Ozturk G, Sharrocks AD and Kurnaz IA<br />

ETS-domain transcription factor Elk-1 mediates neuronal survival: SMN as a potential target.<br />

Biochim Biophys Acta, 2011, 1812,6: 652-662<br />

De Paepe B, Smet J, Vanlander A, Seneca S, Lissens W, De Meirleir L, Vandewoestyne M, Deforce D,<br />

Rodenburg RJ, Van Coster R.<br />

Fluorescence imaging of mitochondria in cultured skin fibroblasts: a useful method for the<br />

detection of oxidative phosphorylation defects.<br />

Pediatr Res. 2012 Sep;72(3):232-40. doi:10.1038/pr.2012.84. PubMed<br />

De Spiegelaere W, Cornillie P, Van Poucke M, Peelman L, Burvenich C and Van den Broeck W<br />

Quantitative mRNA expression analysis in kidney glomeruli using microdissection techniques.<br />

Histol Histopathol, 2011, 26,2: 267-275<br />

Dezső K, Papp V, Bugyik E, Hegyesi H, Sáfrány G, Bödör C, Nagy P, Paku S.<br />

Structural analysis of oval-cell-mediated liver regeneration in rats.<br />

Hepatology.2012 Mar 15. doi: 10.1002/hep.25713. PubMed<br />

Di <strong>Carl</strong>o E, D'Antuono T, Pompa P, Giuliani R, Rosini S, Stuppia L, Musiani P and Sorrentino C<br />

The lack of epithelial interleukin-7 and BAFF/BLyS gene expression in prostate cancer as a<br />

possible mechanism of tumor escape from immunosurveillance.<br />

Clin Cancer Res, 2009, 15,9: 2979-2987<br />

Dietmaier W, Gänsbauer S, Beyser K, Renke B, Hartmann A, Rümmele P, Jauch K-W, Hofstädter F and<br />

Rüschoff J<br />

Microsatellite instability in tumor and nonneoplastic colorectal cells from hereditary nonpolyposis<br />

colorectal cancer and sporadic high microsatellite-instable tumor patients.<br />

Pathobiology, 2000, 68: 227-231<br />

Dietmaier W, Hartmann A, Wallinger S, Heinmöller E, Kerner T, Endl E, Jauch K-W, Hofstädter F and<br />

Rüschoff J<br />

Multiple mutation analyses in single tumor cells with improved whole genome amplification.<br />

Am J Pathol, 1999, 154,1: 83-95<br />

Dinh QT, Cryer A, Dinh S, Peiser C, Wu S, Springer J, Hamelmann E, Klapp BF, Hepp W and Fischer A<br />

Transcriptional up-regulation of histamine receptor-1 in epithelial, mucus and inflammatory<br />

cells in perennial allergic rhinitis.<br />

Clin Exp Allergy, 2005, 35: 1443-1448<br />

Djalilvand A, Pal R, Goldman H, Antonioli D and Kocher O<br />

Evaluation of p53 mutations in premalignant esophageal lesions and esophageal<br />

adenocarcinoma using laser capture microdissection.<br />

Mod Pathol, 2004, 17,11: 1323-1327<br />

October 2012 15/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Doppler K, Lindner A, Schütz W, Schütz M and Bornemann A<br />

Gain and loss of extracellular molecules in sporadic inclusion body myositis and polymyositis-<br />

a proteomics-based study.<br />

Brain Pathol, 2011, in press<br />

Dreja T, Jovanovic Z, Rasche A, Kluge R, Herwig R, Tung YC, Joost HG, Yeo GS and Al-Hasani H<br />

Diet-induced gene expression of isolated pancreatic islets from a polygenic mouse model of<br />

the metabolic syndrome.<br />

Diabetologia, 2010, 53,2: 309-320<br />

van Driel KG, Boekhout T, Wösten HA, Verkleij AJ and Müller WH<br />

Laser microdissection of fungal septa as visualised by scanning electron microscopy.<br />

Fungal Genet Biol, 2007, 44,6: 466-473<br />

Drosopoulou E, Nakou I, Síchová J, Kubíčková S, Marec F, Mavragani-Tsipidou P<br />

Sex chromosomes and associated rDNA form a heterochromatic network in the polytene nuclei<br />

of Bactrocera oleae (Diptera: Tephritidae).<br />

Genetica. 2012 Jul 24. PubMed<br />

Duan Y, Catana A, Meng Y, Yamamoto N, He S, Gupta S, Gambhir SS and Zern MA<br />

Differentiation and enrichment of hepatocyte-like cells from human embryonic stem cells in<br />

vitro and in vivo.<br />

Stem Cells, 2007, 25,12: 3058-3068<br />

Edlund K, Lindskog C, Saito A, Berglund A, Pontén F, Göransson-Kultima H, Isaksson A, Jirström K,<br />

Planck M, Johansson L, Lambe M, Holmberg L, Nyberg F, Ekman S, Bergqvist M, Landelius P, Lamberg K,<br />

Botling J, Ostman A, Micke P.<br />

CD99 is a novel prognostic stromal marker in non-small cell lung cancer.<br />

Int J Cancer. 2012 Mar 6. doi: 10.1002/ijc.27518. PubMed<br />

Von Eggeling F and Ernst G<br />

Microdissected tissue: an underestimated source for biomarker discovery?<br />

Biomarker in Medicine, 2007, 1,2: 217-219<br />

Ehrchen JM, Roebrock K, Foell D, Nippe N, von Stebut E, Weiss JM, Münck NA, Viemann D, Varga G,<br />

Müller-Tidow C, Schuberth HJ, Roth J and Sunderkötter C<br />

Keratinocytes determine Th1 immunity during early experimental leishmaniasis.<br />

PLoS Pathog, 2010, 29;6: e1000871<br />

Eisele S, Krumbholz M, Fischer MT, Mohan H, Junker A, Arzberger T, Hohlfeld R, Bradl M, Lassmann H,<br />

Meinl E.<br />

Prospects of Transcript Profiling for mRNAs and MicroRNAs Using Formalin-Fixed and Paraffin-<br />

Embedded Dissected Autoptic Multiple Sclerosis Lesions.<br />

Brain Pathol. 2012 Jan 10. doi: 10.1111/j.1750-3639.2012.00564.x. PubMed<br />

Eisenberger S, Ackermann K, Voggenreiter G, Sültmann H, Kasperk C and Pyerin W<br />

Metastases and multiple myeloma generate distinct transcriptional footprints in osteocytes in<br />

vivo.<br />

J Pathol, 2008, 214,5: 617-626<br />

Eisenberger S, Hoppe G, Pyerin W and Ackermann K<br />

High-quality RNA preparation for transcript profiling of osteocytes from native human bone<br />

microdissections.<br />

Anal Biochem, 2004, 335,2: 260-266<br />

Ercolino T, Becherini L, Valeri A, Maiello M, Gaglianò MS, Parenti G, Ramazzotti M, Piscitelli E, Simi L,<br />

Pinzani P, Nesi G, Degl'Innocenti D, Console N, Bergamini C and Mannelli M<br />

Uncommon clinical presentations of pheochromocytoma and paraganglioma in two different<br />

patients affected by two distinct novel VHL germline mutations.<br />

Clin Endocrinol (Oxf), 2008, 68,5: 762-768<br />

Ernst T, Hergenhahn M, Kenzelmann M, Cohen CD, Bonrouhi M, Weninger A, Klären R, Gröne EF, Wiesel<br />

M, Güdemann C, Küster J, Schott W, Staehler G, Kretzler M , Hollstein M and Gröne HJ<br />

Decrease and gain of gene expression are equally discriminatory markers for prostate<br />

carcinoma.<br />

Am J Pathol, 2002, 160,6: 2169-2180<br />

October 2012 16/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Evans J, Kaitu'u-Lino T and Salamonsen LA<br />

Extracellular matrix dynamics in scar-free endometrial repair: perspectives from mouse in vivo<br />

and human in vitro studies.<br />

Biol Reprod, 2011, 85,3: 511-523<br />

Evans EA, Zhang H and Martin-DeLeon PA<br />

SPAMI (PH-20) protein and mRNA expression in the epididymides of humans and macaques:<br />

Utilizing laser microdissection/RT-PCR.<br />

Reprod Biol Endocrinol, 2003, 1: 54<br />

Evert M, Schneider-Stock R and Dombrowski F<br />

Overexpression of fatty acid synthase in chemically and hormonally induced<br />

hepatocarcinogenesis of the rat.<br />

Lab Invest, 2005, 85,1: 99-108<br />

Evert M, Schneider-Stock R and Dombrowski F<br />

Apolipoprotein A-IV mRNA overexpression in early preneoplastic hepatic foci induced by lownumber<br />

pancreatic islet transplants in streptozotocin-diabetic rats.<br />

Pathol Res Pract, 2003, 199: 373-379<br />

Fackler MJ, Umbricht CB, Williams D, Argani P, Cruz LA, Merino VF, Teo WW, Zhang Z, Huang P,<br />

Visvananthan K, Marks J, Ethier S, Gray JW, Wolff AC, Cope LM and Sukumar S<br />

Genome-wide methylation analysis identifies genes specific to breast cancer hormone receptor<br />

status and risk of recurrence.<br />

Cancer Res, 2011, 71,19: 6195-6207<br />

Fang F, Christian WV, Gorman SG, Cui M, Huang J, Tieu K and Ballatori N<br />

Neurosteroid transport by the organic solute transporter OSTα-OSTß.<br />

J Neurochem, 2010, 115,1: 220-233<br />

Farahani RM, Sarrafpour B, Simonian M, Li Q, Hunter N.<br />

Directed glia-assisted angiogenesis in a mature neurosensory structure: Pericytes mediate an<br />

adaptive response in human dental pulp that maintains blood-barrier function.<br />

J Comp Neurol. 2012 Jun 8. doi: 10.1002/cne.23162. PubMed<br />

Fassunke J, Blümcke I, Lahl R, Elger CE, Schramm J, Merkelbach-Bruse S, Mathiak M, Wiestler OD and<br />

Becker AJ<br />

Analysis of chromosomal instability in focal cortical dysplasia of Taylor´s balloon cell type.<br />

A Neuropathol, 2004, 108,2: 129-134<br />

Fassunke J, Majores M, Ullmann C, Elger CE, Schramm J, Wiestler OD and Becker AJ<br />

In situ-RT and immunolaser microdissection for mRNA analysis of individual cells isolated<br />

from epilepsy-associated glioneuronal tumors.<br />

Lab Invest, 2004, 84,11: 1520-1525<br />

Feist H, Lilischkis R, Hallas C, Aanesen JJ, Gassel A, Gallert K-C and Kreipe H<br />

Klonalitätsanalysen in Geweben durch PCR und Laser-Mikrodissektion.<br />

Verh Dtsch Ges Pathol, 1997, 81: 339-342<br />

Fellenberg J, Krauthoff A, Pollandt K, Delling G and Pasch D<br />

Evaluation of the predictive value of Her-2/neu gene expression on osteosarcoma therapy in<br />

laser-microdissected paraffin-embedded tissue.<br />

Lab Invest, 2004, 84: 113-121<br />

Fellous TG, Islam S, Tadrous PJ, Elia G, Kocher HM, Bhattacharya S, Mears L, Turnbull DM, Taylor RW,<br />

Greaves LC, Chinnery PF, Taylor G, McDonald SA, Wright NA and Alison MR<br />

Locating the stem cell niche and tracing hepatocyte lineages in human liver.<br />

Hepatology, 2009, 49,5: 1655-1663<br />

Feng Y, Johansson J, Shao R, Mannerås Holm L, Billig H, Stener-Victorin E.<br />

Electrical and manual acupuncture stimulation affects estrous cyclicity and neuroendocrine<br />

function in a DHT-induced rat polycystic ovary syndrome model.<br />

Exp Physiol. 2012 Feb 24. [Epub ahead of print]. PubMed<br />

October 2012 17/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Ferri N, Carragher NO and Raines EW<br />

Role of discoidin domain receptors 1 and 2 in human smooth muscle cell-mediated collagen<br />

remodeling.<br />

Am J Pathol, 2004, 164,5: 1575-1585<br />

Fiegler H, Geigl JB, Langer S, Rigler D, Porter K, Unger K, Carter NP and Speicher MR<br />

High resolution array-CGH analysis of single cells.<br />

Nucleic Acids Res, 2007, 35,3: e15<br />

Fink L, Hölschermann H, Kwaposzewska G, Muyal JP, Lengemann B, Bohle RM and Santoso S<br />

Characterization of platelet-specific mRNA by real-time PCR after laser-assisted microdissection.<br />

Thromb Haemost, 2003, 90,4: 749-756<br />

Fink L, Kohlhoff S, Stein MM, Hänze J, Weissmann N, Rose F, Akkayagil E, Manz D, Grimminger F, Seeger<br />

W and Bohle RM<br />

cDNA array hybridization after laser-assisted microdissection from nonneoplastic tissue.<br />

Am J Pathol, 2002, 160,1: 81-90<br />

Fink L, Kinfe T, Seeger W, Ermert L, Kummer W and Bohle RM<br />

Immunostaining for cell picking and real-time mRNA quantitation.<br />

Am J Pathol, 2000, 157,5: 1459-1466<br />

Fink L, Stahl U, Ermert L, Kummer W, Seeger W and Bohle RM<br />

Rat porphobilinogen deaminase gene: a pseudogene-free internal standard for laser-assisted<br />

cell picking.<br />

BioTechniques, 1999, 26: 516-519<br />

Fink L, Seeger W, Ermert L, Hänze J, Stahl U, Grimminger F, Kummer W and Bohle RM<br />

Real-time quantitative RT-PCR after laser-assisted cell picking.<br />

Nature Medicine, 1998, 4,11: 1329-1333<br />

Fleischer J, Mamasuew K and Breer H<br />

Expression of cGMP signaling elements in the Grueneberg ganglion.<br />

Histochem Cell Biol, 2009, 131,1: 75-88<br />

Flemming P, Tillmann HL, Barg-Hock H, Kleeberger W, Manns MP, Klempnauer J and Kreipe HH<br />

Donor origin of de novo hepatocellular carcinoma in hepatic allografts.<br />

Transplantation, 2003, 76,5: 871-873<br />

Fominaya A, Linares C, Loarce Y and Ferrer E<br />

Microdissection and microcloning of plant chromosomes.<br />

Cytogenet Genome Res, 2005, 109: 8-14<br />

Forni PE, Fornaro M, Guénette S and Wray S<br />

A role for FE65 in controlling GnRH-1 neurogenesis.<br />

J Neurosci, 2011, 31,2: 480-491<br />

Fosu-Nyarko J, Jones MG and Wang Z<br />

Application of laser microdissection to study plant-fungal pathogen interactions.<br />

Methods Mol Biol, 2010, 638: 153-163<br />

Fosu-Nyarko J, Jones MG and Wang Z<br />

Functional characterization of transcripts expressed in early-stage Meloidogyne javanicainduced<br />

giant cells isolated by laser microdissection.<br />

Mol Plant Pathol, 2009, 10,2: 237-248<br />

Foteinos G, Hu Y, Xiao Q, Metzler B and Xu Q<br />

Rapid endothelial turnover in atherosclerosis-prone areas coincides with stem cell repair in<br />

apolipoprotein E-deficient mice.<br />

Circulation, 2008, 117,14: 1856-1863<br />

Fragiadaki M, Witherden AS, Kaneko T, Sonnylal S, Pusey CD, Bou-Gharios G and Mason RM<br />

Interstitial fibrosis is associated with increased COL1A2 transcription in AA-injured renal<br />

tubular epithelial cells in vivo.<br />

Matrix Biol, 2011, 30,7-8: 396-403<br />

October 2012 18/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Franchi A, Massi D, Gallo O, Santucci M and Porfirio B<br />

Radiation-induced cutaneous carcinoma of the head and neck: is there an early role for p53<br />

mutations?<br />

Clin Exp Dermatol, 2006, 31,6: 793-798<br />

Franchina M, Woo A, Dods J, Karimi M, Ho D, Watanabe T, Spagnolo D and Abraham L<br />

The CD30 gene promoter microsatellite binds transcription factor Yin Yang 1 (YY1) and shows<br />

genetic instability in anaplastic large cell lymphoma.<br />

J Pathol, 2007, 214,1: 65-74<br />

Friedemann G<br />

Live cells from cell culture: Direct isolation of poly-A(+) mRNA from individual laser<br />

microdissected cell samples obtained with the PALM MicroBeam System.<br />

PALM, 2004, Application Note, 1-3<br />

Friedman JS, Chang B, Krauth DS, Lopez I, Waseem NH, Hurd RE, Feathers KL, Branham KE, Shaw M,<br />

Thomas GE, Brooks MJ, Liu C, Bakeri HA, Campos MM, Maubaret C, Webster AR, Rodriguez IR, Thompson<br />

DA, Bhattacharya SS, Koenekoop RK, Heckenlively JR and Swaroop A<br />

Loss of lysophosphatidylcholine acyltransferase 1 leads to photoreceptor degeneration in rd11<br />

mice.<br />

PNAS USA, 2010, 107,35: 15523-15528<br />

Fries JWU, Roth T, Dienes HP, Weber M and Odenthal M<br />

A novel evaluation method for paraffinized human renal biopsies using quantititative analysis<br />

of microdissected glomeruli and VCAM-1 as marker of inflammatory mesangial cell activation.<br />

Nephrol Dial Transplant, 2003, 18: 710-716<br />

Fries JWU, Pakula A, Roth A, Dienes HP and Odenthal M<br />

Quantitation of inflammatory and proliferative genes as disease markers in lasermicrodissected<br />

formalin-fixed and paraffinized glomeruli from human renal biopsies.<br />

Gene Funct Dis, 2002, 3,3-4: 98-108<br />

Fritzsche S, Kenzelmann M, Hoffmann MJ, Müller M, Engers R, Gröne HJ and Schulz WA<br />

Concomitant down-regulation of SPRY1 and SPRY2 in prostate carcinoma.<br />

Endocrinol, 2006, 13,3: 839-849<br />

Fröhlich J and König H<br />

New techniques for isolation of single prokaryotic cells.<br />

FEMS Microbiology Reviews, 2000, 24: 567-572<br />

Frumkin D, Wasserstrom A, Itzkovitz S, Stern T, Harmelin A, Eilam R, Rechavi G and Shapiro E<br />

Cell lineage analysis of a mouse tumor.<br />

Cancer Res, 2008, 68,14: 5924-5931<br />

Frungieri MB, Calandra RS, Lustig L, Meineke V, Köhn FM, Vogt, HJ and Mayerhofer A<br />

Number, distribution pattern, and identification of macrophages in the testes of infertile men.<br />

Fertil Steril, 2002, 78,2: 298-306<br />

Frungieri MB, Weidinger S, Meineke V, Köhn FM and Mayerhofer A<br />

Proliferative action of mast-cell tryptase is mediated by PAR2, COX2, prostaglandins and<br />

PPAR�: Possible relevance to human fibrotic disorders.<br />

PNAS, 2002, 99,23: 15072-15077<br />

Fujii K, Miyashita K, Yamada Y, Eguchi T, Taguchi K, Oda Y, Oda S, Yoshida MA, Tanaka M and<br />

Tsuneyoshi M<br />

Simulation-based analyses reveal stable microsatellite sequences in human pancreatic cancer.<br />

Cancer Genet Cytogenet, 2009, 189,1: 5-14<br />

Fujimura S, Kato S, Oda M, Miyahara M, Ito Y, Kimura K, Kawamura T, Ohnuma M, Tateno H and<br />

Watanabe A<br />

Detection of Lactobacillus gasseri OLL2716 strain administered with yogurt drink in gastric<br />

mucus layer in humans.<br />

Lett Appl Microbiol, 2006, 43: 578-581<br />

Fujita T, Firth JD, Kittaka M, Ekuni D, Kurihara H, Putnins EE.<br />

Loss of claudin-1 in lipopolysaccharide-treated periodontal epithelium.<br />

J Periodontal Res. 2012 Apr;47(2):222-7. doi: 10.1111/j.1600-0765.2011.01424.x. PubMed<br />

October 2012 19/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Fujita H, Ohuchida K, Mizumoto K, Egami T, Miyasaka Y, Yamaguchi H, Yu J, Cui L, Onimaru M, Takahata<br />

S, Tsuneyoshi M and Tanaka M<br />

Quantitative analysis of hTERT mRNA levels in cells microdissected from cytological<br />

specimens.<br />

Cancer Sci, 2008, 99,11: 2244-2251<br />

Fujita K, Komatsu K, Tanaka K, Ohshima S, Asami Y, Murata E and Akita M<br />

An in vitro model studying vascular injury after laser microdissection.<br />

Histochem Cell Biol, 2006, 125,5: 509-514<br />

Fuková I, Traut W, Vitková M, Nguyen P, Kubičková S and Marec F<br />

Probing the W chromosome of the codling moth, Cydia pomonella, with sequences from<br />

microdissected sex chromatin.<br />

Chromosoma, 2007, 116,2: 135-145<br />

Funke B, Lasitschka F, Roth W, Penzel R, Meuer S, Saile M, Gretz N, Sido B, Schirmacher P and<br />

Autschbach F<br />

Selective downregulation of retinoic acid-inducible gene I within the intestinal epithelial<br />

compartment in Crohn's disease.<br />

Inflamm Bowel Dis, 2011, 17,9: 1943-1954<br />

Funke B<br />

Laser microdissection of intestinal epithelial cells and downstream analysis.<br />

Methods Mol Biol, 2011, 755: 189-196<br />

Funke B, Lasitschka F, Roth W, Penzel R, Meuer S, Saile M, Gretz N, Sido B, Schirmacher P and<br />

Autschbach F<br />

Selective downregulation of retinoic acid-inducible gene I within the intestinal epithelial<br />

compartment in crohn's disease.<br />

Inflamm Bowel Dis, 2011, in press<br />

Funke B, Autschbach F, Kim S, Lasitschka F, Strauch U, Rogler G, Gdynia G, Li L, Gretz N, Macher-<br />

Goeppinger S, Sido B, Schirmacher P, Meuer SC and Roth W<br />

Functional characterization of decoy receptor 3 in Crohn's disease.<br />

Gut, 2009, 58,4: 483-491<br />

Gaetje R, Holtrich U, Karn T, Cikrit E, Engels K, Rody A and Kaufmann M<br />

Characterization of WNT7A expression in human endometrium and endometriotic lesions.<br />

Fertil Steril, 2007, 88,6: 1534-1540<br />

Gailus-Durner V, Fuchs H, Adler T, Pimentel AA, Becker L, Bolle I, Calzada-Wack J, Dalke C, Ehrhardt N,<br />

Ferwagner B, Hans W, Hölter SM, Hölzlwimmer G, Horsch M, Javaheri A, Kallnik M, Kling E, Lengger C,<br />

Mörth C, Mossbrugger I, Naton B, Prehn C, Puk O, Rathkolb B, Rozman J, Schrewe A, Thiele F, Adamski J,<br />

Aigner B, Behrendt H, Busch DH, Favor J, Graw J, Heldmaier G, Ivandic B, Katus H, Klingenspor M,<br />

Klopstock T, Kremmer E, Ollert M, Quintanilla-Martinez L, Schulz H, Wolf E, Wurst W and de Angelis MH<br />

Systemic first-line phenotyping.<br />

Methods Mol Biol, 2009, 530: 463-509<br />

Gallardo F, Pujol B, Bellosillo B, Ferrer D, Garcia M, Barranco C, Planaguma M and Serrano S<br />

Primary cutaneous B-cell lymphoma (marginal zone) with prominent T-cell component and<br />

aberrant dual (T and B) genotype; diagnostic usefulness of laser capture microdissection.<br />

Br J Dematol, 2006, 154,1: 162-166<br />

Gallos G, Yim P, Chang S, Zhang Y, Xu D, Cook JM, Gerthoffer WT, Emala CW Sr.<br />

Targeting the restricted α-subunit repertoire of airway smooth muscle GABAA receptors<br />

augments airway smooth muscle relaxation.<br />

Am J Physiol Lung Cell Mol Physiol. 2012 Jan;302(2):L248-56. PubMed PMID: 21949156 PubMed<br />

Gamel-Didelon K, Kunz L, Föhrs KJ, Gratzl M and Mayerhofer A<br />

Molecular and physiological evidence for functional �-aminobutyric acid (GABA)-C receptors in<br />

growth hormone-secreting cells.<br />

J Biol Chem, 2003, 278,22: 20192-20195<br />

October 2012 20/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Gamel-Didelon K, Corsi C, Pepeu G, Jung H, Gratzl M and Mayerhofer A<br />

An autocrine role for pituitary GABA: Activation of GABA-B receptors and regulation of growth<br />

hormone levels.<br />

Neuroendocrionology, 2002, 76: 170-177<br />

Gangnus R, Langer S, Breit E, Pantel K and Speicher MR<br />

Genomic profiling of viable and proliferative micrometastatic cells from early-stage breast<br />

cancer patients.<br />

Clin Cancer Res, 2004, 10,10: 3457-3464<br />

Gao SF and Bao AM<br />

Corticotropin-Releasing Hormone, glutamate, and γ-aminobutyric acid in depression.<br />

Neuroscientist, 2010, in press<br />

Gao S, Krogdahl A, Sørensen JA, Kousted TM, Dabelsteen E and Andreasen PA<br />

Overexpression of protease nexin-1 mRNA and protein in oral squamous cell carcinomas.<br />

Oral Oncol, 2008, 44,3: 309-313<br />

Gao S, Bennett EP, Reibel J, Chen X, Christensen ME, Krogdahl A and Dabelsteen E<br />

Histo-blood group ABO antigen in oral potentially malignant lesions and squamous cell<br />

carcinoma – genotypic and phenotypic characterization.<br />

APMIS, 2004, 112: 11-20<br />

Gao S, Worm J, Guldberg P, Eiberg H, Krogdahl H, Liu CJ, Reibel J and Dabelsteen E<br />

Genetic and epigenetic alterations of the blood group ABO gene in oral squamous cell<br />

carcinoma.<br />

Int J Cancer, 2004, 109: 230-237<br />

Garcia AA, Blessing JA, Lenz HJ, Darcy KM, Mannel RS, Miller DS and Husseinzadeh N<br />

Phase II clinical trial of capecitabine in ovarian carcinoma recurrent 6-12 months after<br />

completion of primary chemotherapy, with exploratory TS, DPD, and TP correlates: a<br />

gynecologic oncology group study.<br />

Gynecol Oncol, 2005, 96: 810-817<br />

García-López Á, de Jonge H, Nóbrega RH, de Waal PP, van Dijk W, Hemrika W, Taranger GL, Bogerd J<br />

and Schulz RW<br />

Studies in zebrafish reveal unusual cellular expression patterns of gonadotropin receptor<br />

messenger ribonucleic acids in the testis and unexpected functional differentiation of the<br />

gonadotropins.<br />

Endocrinology, 2010, 151,5: 2349-2360<br />

García-López A, Bogerd J, Granneman JC, van Dijk W, Trant JM, Taranger GL and Schulz RW<br />

Leydig cells express FSH receptors in african catfish.<br />

Endocrinology, 2009, 150,1: 357-365<br />

Garcia-Olivé I, Monsó E, Andreo F, Sanz-Santos J, Taron M, Molina-Vila MA, Llatjós M, Castellà E, Moran<br />

T, Bertran-Alamillo J, Mayo-de-las-Casas C, Queralt C and Rosell R<br />

Endobronchial ultrasound-guided transbronchial needle aspiration for identifying epidermal<br />

growth factor receptor mutations.<br />

Eur Respir J, 2010, 35,2: 391-395<br />

García-Ruano AB, Méndez R, Romero JM, Cabrera T, Ruiz-Cabello F and Garrido F<br />

Analysis of HLA-ABC locus-specific transcription in normal tissues.<br />

Immunogenetics, 2010, 62, 11-12:711-719<br />

Gassmann M<br />

Quality assurance of RNA derived from laser microdissected tissue samples obtained by the<br />

PALM MicroBeam System using RNA 6000 Pico LabChip kit.<br />

Agilent, 2003, Application Note 5988-9128EN<br />

Gaude N, Bortfeld S, Duensing N, Lohse M and Krajinski F<br />

Arbuscule-containing and non-colonized cortical cells of mycorrhizal roots undergo extensive<br />

and specific reprogramming during arbuscular mycorrhizal development.<br />

Plant J, 2011, in press, doi: 10.1111/j.1365-313X.2011.04810.x<br />

October 2012 21/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Gava N, L Clarke C, Bye C, Byth K and Defazio A<br />

Global gene expression profiles of ovarian surface epithelial cells in vivo.<br />

J Mol Endocrinol, 2008, 40,6: 281-296<br />

Geigerseder C, Doepner R, Thalhammer A, Frungieri MB, Gamel-Didelon K, Calandra RS, Köhn FM and<br />

Mayerhofer A<br />

Evidence for a GABAergic system in rodent and human testis: Local GABA production and GABA<br />

receptors.<br />

Neuroendocrinology, 2003, 77: 314-323<br />

Geigl JB, Obenauf AC, Waldispuehl-Geigl J, Hoffmann EM, Auer M, Hörmann M, Fischer M, Trajanoski Z,<br />

Schenk MA, Baumbusch LO and Speicher MR<br />

Identification of small gains and losses in single cells after whole genome amplification on<br />

tiling oligo arrays.<br />

Nucleic Acids Res, 2009, 37,15: e105<br />

Geigl JB and Speicher MR<br />

Single-cell isolation from cell suspensions and whole genome amplification from single cells to<br />

provide templates for CGH analysis.<br />

Nat Protoc, 2007, 2,12: 3173-3184<br />

George MD, Wehkamp J, Kays RJ, Leutenegger CM, Sabir S, Grishina I, Dandekar S and Bevins CL<br />

In vivo gene expression profiling of human intestinal epithelial cells: analysis by laser microdissection<br />

of formalin fixed tissues.<br />

BMC Genomics, 2008, 9: 209<br />

Giacobini P, Kopin AS, Beart PM, Mercer LD, Fasolo A and Wray S<br />

Cholecystokinin modulates migration of gonadotropin-releasing hormone-1 neurons.<br />

J Neurosci, 2004, 24,20: 4737-4748<br />

Giger T, Khaitovich P, Somel M, Lorenc A, Lizano E, Harris LW, Ryan MM, Lan M, Wayland MT, Bahn S and<br />

Pääbo S<br />

Evolution of neuronal and endothelial transcriptomes in primates.<br />

Genome Biol Evol, 2010, 2: 284-292<br />

Gil L, Yaron I, Shalitin D, Sauer N, Turgeon R and Wolf S<br />

Sucrose transporter plays a role in phloem loading in CMV-infected melon plants that are<br />

defined as symplastic loaders.<br />

Plant J, 2011, 66,2: 366-374<br />

Glöckner S, Buurman H, Kleeberger W, Lehmann U and Kreipe H<br />

Marked intratumoral heterogeneity of c-myc and CyclinD1 but not of c-erbB2 amplification in<br />

breast cancer.<br />

Lab Invest, 2002, 82,10: 1419-1426<br />

Glöckner S, Lehmann U, Wilke N, Kleeberger W, Länger F and Kreipe H<br />

Amplification of growth regulatory genes in intraductal breast cancer is associated with higher<br />

nuclear grade but not with the progression to invasiveness.<br />

Lab Invest, 2001, 81,4: 565-571<br />

Glöckner S, Lehmann U, Wilke N, Kleeberger W, Länger F and Kreipe H<br />

Detection of gene amplification in intraductal and infiltrating breast cancer by laser-assisted<br />

microdissection and quantitative real-time PCR.<br />

Pathobiology, 2000, 68: 173-179<br />

Gloess S, Grossart HP, Allgaier M, Ratering S and Hupfer M<br />

Use of laser microdissection for phylogenetic characterization of polyphosphate-accumulating<br />

bacteria.<br />

Appl Environ Microbiol, 2008, 74,13: 4231-4235<br />

Gobert GN, McManus DP, Nawaratna S, Moertel L, Mulvenna J and Jones MK<br />

Tissue specific profiling of females of schistosoma japonicum by integrated laser microdissection<br />

microscopy and microarray analysis.<br />

PLoS Negl Trop Dis, 2009, 3,6: e469<br />

October 2012 22/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Göransson H, Edlund K, Rydåker M, Rasmussen M, Winquist J, Ekman S, Bergqvist M, Thomas A, Lambe<br />

M, Rosenquist R, Holmberg L, Micke P, Botling J and Isaksson A<br />

Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer<br />

samples using SNP array data.<br />

PLoS One, 2009, 4,6: e6057<br />

Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, Save V, O'Donovan M, Eijk PP, Alderson D, Ylstra B,<br />

Caldas C and Fitzgerald RC<br />

Integrative analysis of array-comparative genomic hybridisation and matched gene expression<br />

profiling data reveals novel genes with prognostic significance in oesophageal<br />

adenocarcinoma.<br />

Gut, 2011, 60,10: 1317-1326<br />

Goh XY, Pal M, Chong HC, Zhu P, Tan MJ, Punugu L, Tan CK, Huang RL, Sze SK, Tang MB, Ding JL,<br />

Kersten S and Tan NS<br />

Angiopoietin-like 4 interacts with matrix proteins to modulate wound healing.<br />

J Biol Chem, 2010, 285,43: 32999-33009<br />

Goldie SJ, Mulder KW, Tan DW, Lyons SK, Sims AH, Watt FM.<br />

FRMD4A upregulation in human squamous cell carcinoma promotes tumor growth and<br />

metastasis and is associated with poor prognosis.<br />

Cancer Res. 2012 Jul 1;72(13):3424-36. PubMed<br />

Goldmann T, Burgemeister R, Sauer U, Loeschke S, Lang DS, Branscheid D, Zabel P and Vollmer E<br />

Enhanced molecular analyses by combination of the HOPE-technique and laser microdissection.<br />

Diagnostic Pathol, 2006, 1,2: 1-5<br />

Gomez SK, Javot H, Deewatthanawong P, Torres-Jerez I, Tang Y, Blancaflor EB, Udvardi MK and Harrison<br />

MJ<br />

Medicago truncatula and Glomus intraradices gene expression in cortical cells harboring<br />

arbuscules in the arbuscular mycorrhizal symbiosis.<br />

BMC Plant Biol, 2009, 9:10<br />

Gotter AL, Nimmakayalu MA, Jalali GR, Hacker AM, Vorstman J, Conforto Duffy D,<br />

Medne L and Emanuel BS<br />

A palindrome-driven complex rearrangement of 22q11.2 and 8q24.1 elucidated using novel<br />

technologies.<br />

Genome Res, 2007, 174: 470-481<br />

Grab DJ, Garcia-Garcia JC, Nikolskaia OV, Kim YV, Brown A, Pardo CA, Zhang Y, Becker KG, Wilson BA,<br />

de A Lima AP, Scharfstein J and Dumler JS<br />

Protease activated receptor signaling is required for african trypanosome traversal of human<br />

brain microvascular endothelial cells.<br />

PLoS Negl Trop Dis, 2009, 3,7: e479<br />

Gramann M, Wendler O, Haeberle L and Schick B<br />

Prominent collagen type VI expression in juvenile angiofibromas.<br />

Histochem Cell Biol, 2009, 131,1: 155-164<br />

Green AR, Krivinskas S, Young P, Rakha EA, Paish EC, Powe DG and Ellis IO<br />

Loss of expression of chromosome 16q genes DPEP1 and CTCF in lobular carcinoma in situ of<br />

the breast.<br />

Breast Cancer Res Treat, 2009, 113,1: 59-66<br />

Green AR, Young P, Krivinskas S, Rakha EA, Paish EC, Powe DG and Ellis IO<br />

The expression of ERα, ERß and PR in lobular carcinoma in situ of the breast determined using<br />

laser microdissection and real-time PCR.<br />

Histopathology, 2009, 54,4: 419-427<br />

Grill SW, Gönczy P, Stelzer EHK and Hyman AA<br />

Polarity controls forces governing asymmetric spindle positioning in the Caenorhabditis<br />

elegans embryo.<br />

Nature, 2001, 409: 630-633<br />

October 2012 23/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Grimm J, Mueller A, Hefti F and Rosenthal A<br />

Molecular basis for catecholaminergic neuron diversity.<br />

Proc Natl Acad Sci, 2004, 101,38: 13891-13896<br />

Grimminger PP, Danenberg P, Dellas K, Arnold D, Rödel C, Machiels J, Haustermans K, Debucquoy A,<br />

Velenik V, Sempoux C, Bracko M, Hölscher A, Semrau R, Yang D, Danenberg K, Lenz H and Vallböhmer D<br />

Biomarkers for cetuximab-based neoadjuvant radiochemotherapy in locally advanced rectal<br />

cancer.<br />

Clin Cancer Res, 2011, 17(10): 3469-3477<br />

Gröne HJ, Cohen CD, Gröne E, Schmidt C, Kretzler M, Schlöndorf D and Nelson PJ<br />

Spatial and temporally restricted expression of chemokines and chemokine receptors in the<br />

developing human kidney.<br />

J Am Soc Nephrol, 2002, 13: 957-967<br />

Grosse J, Bulling A, Brucker C, Berg U, Amsterdam A, Mayerhofer A and Gratzl M<br />

Synaptosome-associated protein of 25 kilodaltons in oocytes and steroid-producing cells of rat<br />

and human ovary: molecular analysis and regulation by gonadotropins.<br />

Biol Reprod, 2000, 63: 643-650<br />

Grzmil M, Hemmerlein B, Thelen P, Schweyer S and Burfeind P<br />

Blockade of the type I IGF receptor expression in human prostate cancer cells inhibits<br />

proliferation and invasion, up-regulates IGF binding protein-3, and suppresses MMP-2<br />

expression.<br />

J Pathol, 2004, 202: 50-59<br />

Gu X, Nylander E, Coates PJ and Nylander K<br />

Effect of narrow-band ultraviolet B phototherapy on p63 and microRNA (miR-21 and miR-<br />

125b) expression in psoriatic epidermis.<br />

Acta Derm Venereol, 2011, 91(4): 392-397<br />

Guan X, Lee JJ, Pang M, Shi X, Stelly DM and Chen ZJ<br />

Activation of Arabidopsis seed hair development by cotton fiber-related genes.<br />

PLoS One, 2011, 6,7: e21301<br />

Gudi V, Škuljec J, Yildiz Ö, Frichert K, Skripuletz T, Moharregh-Khiabani D, Voss E, Wissel K, Wolter S and<br />

Stangel M<br />

Spatial and temporal profiles of growth factor expression during CNS demyelination reveal the<br />

dynamics of repair priming.<br />

PLoS One, 2011, 6,7: e22623<br />

Guenin S, Mouallif M, Deplus R, Lampe X, Krusy N, Calonne E, Delbecque K, Kridelka F, Fuks F, Ennaji<br />

MM, Delvenne P.<br />

Aberrant Promoter Methylation and Expression of UTF1 during Cervical Carcinogenesis.<br />

PLoS One. 2012;7(8):e42704. PubMed<br />

Guest I, Ilic Z, Ma J, Grant D, Glinsky G and Sell S<br />

Direct and indirect contribution of bone marrow-derived cells to cancer.<br />

Int J Cancer, 2010, 126,10: 2308-2318<br />

Guo Y, Yang Y, Zhou J, Czajkowsky DM, Liu B, Shao Z.<br />

Microdissection of spatially identified single nuclei in a solid tumor for single cell whole<br />

genome sequencing.<br />

Biotechniques. 2012 Apr;0(0):1-3. PubMed PMID: 22668516. PubMed<br />

Gupta HS, Seto J, Wagermaier W, Zaslansky P, Boesecke P and Fratzl P<br />

Cooperative deformation of mineral and collagen in bone at the nanoscale.<br />

Proc Natl Acad Sci U S A, 2006, 103,47: 17741-17746<br />

Gutierrez-Gonzalez L, Graham TA, Rodriguez-Justo M, Leedham SJ, Novelli MR, Gay LJ, Ventayol-Garcia<br />

T, Green A, Mitchell I, Stoker DL, Preston SL, Bamba S, Yamada E, Kishi Y, Harrison R, Jankowski JA,<br />

Wright NA and McDonald SA<br />

The clonal origins of dysplasia from intestinal metaplasia in the human stomach.<br />

Gastroenterology, 2011, in press<br />

October 2012 24/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Gutjahr C, Radovanovic D, Geoffroy J, Zhang Q, Siegler H, Chiapello M, Casieri L, An K, An G, Guiderdoni<br />

E, Kumar CS, Sundaresan V, Harrison MJ, Paszkowski U.<br />

The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule<br />

formation in rice.<br />

Plant J. 2012 Mar;69(5):906-20. doi: 10.1111/j.1365-313X.2011.04842.x. PubMed<br />

Hagemann T, Bozanovic T, Hooper S, Ljubic A, Slettenaar VI, Wilson JL, Singh N, Gayther SA, Shepherd<br />

JH and Van Trappen PO<br />

Molecular profiling of cervical cancer progression.<br />

Br J Cancer, 2007, 96,2: 321-328<br />

Hagemeijer MC, van Oosterhout MF, van Wichen DF, van Kuik J, Siera-de Koning E, Gmelig Meyling FH,<br />

Schipper ME, de Jonge N and de Weger RA<br />

T cells in cardiac allograft vasculopathy are skewed to memory Th-1 cells in the presence of a<br />

distinct Th-2 population.<br />

Am J Transplant, 2008, 8,5: 1040-1050<br />

Hahn S and Holzgreve W<br />

Prenatal Diagnosis using fetal cells and cell-free fetal DNA in maternal blood: what is currently<br />

feasible?<br />

Clin Obstet Gynecol, 2002, 45,3: 649-656<br />

Hahn S, Zhong XY, Troeger C, Burgemeister R, Gloning K and Holzgreve W<br />

Current applications of single-cell PCR.<br />

CMLS Cell Mol Life Sci, 2000, 57: 96-105<br />

Hahtola S, Burghart E, Jeskanen L, Karenko L, Abdel-Rahman WM, Polzer B, Kajanti M, Peltomäki P,<br />

Pettersson T, Klein CA and Ranki A<br />

Clinicopathological characterization and genomic aberrations in subcutaneous panniculitis-like<br />

T-cell lymphoma.<br />

J Invest Dermatol, 2008, 128,9: 2304-2309<br />

Haller F, Detken S, Schulten HJ, Happel N, Gunawan B, Kuhlgatz J and Füzesi L<br />

Surgical management after neoadjuvant Imatinib therapy in gastrointestinal stromal tumours<br />

(GISTs) with respect to Imatinib resistance caused by secondary KIT mutations.<br />

Ann Surg Oncol, 2007, 14,2: 526-532<br />

Hama R, Watanabe Y, Shinada K, Yamada Y, Ogata Y, Yoshida Y, Tamura T, Hiraishi T, Oikawa R, Sakurai<br />

J, Maehata T, Koizumi H, Itoh F.<br />

Characterization of DNA hypermethylation in two cases of peritoneal mesothelioma.<br />

Tumour Biol. 2012 Jul 27. PubMed<br />

Hambach L, Ling KW, Pool J, Aghai Z, Blokland E, Tanke HJ, Bruijn JA, Halfwerk H, van Boven H, Wieles B<br />

and Goulmy E<br />

Hypomethylating drugs convert HA-1 negative solid tumors into targets for stem cell based<br />

immunotherapy.<br />

Blood, 2009, 113,12: 2715-2722<br />

Hampton DW, Webber DJ, Bilican B, Goedert M, Spillantini MG and Chandran S<br />

Cell-mediated neuroprotection in a mouse model of human tauopathy.<br />

J Neurosci, 2010, 30,30: 9973-9983<br />

Hayashi Y, Matsunaga T, Yamamoto G, Nishii K, Usui M, Yamamoto M and Tachikawa T<br />

Comprehensive analysis of gene expression in the junctional epithelium by laser microdissection<br />

and microarray analysis.<br />

J Periodontal Res, 2010, 45,5: 618-625<br />

von der Hardt K, Kandler MA, Fink L, Schoof E, Dötsch J, Brandenstein O, Bohle RM and Rascher W<br />

High frequency oscillatory ventilation suppresses inflammatory response in lung tissue and<br />

microdissected alveolar macrophages in surfactant depleted piglets.<br />

Pediatr Res, 2004, 55,2: 339-346<br />

von der Hardt K, Kandler MA, Fink L, Schoof E, Dötsch J, Bohle RM and Rascher W<br />

Laser-assisted microdissection and real-time PCR detect anti-inflammatory effect of<br />

perfluorocarbon.<br />

Am J Physiol Lung Cell Mol Physiol, 2003, 285: L55-L62<br />

October 2012 25/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Harrington AM, Hughes PA, Martin CM, Yang J, Castro J, Isaacs NJ, Ashley Blackshaw L and Brierley SM<br />

A novel role for TRPM8 in visceral afferent function.<br />

Pain, 2011, 152(7): 1459-1468<br />

Harris LW, Wayland M, Lan M, Ryan M, Giger T, Lockstone H, Wuethrich I, Mimmack M, Wang L, Kotter<br />

M, Craddock R and Bahn S<br />

The cerebral microvasculature in schizophrenia: a laser capture microdissection study.<br />

PLoS ONE, 2008, 3,12: e3964<br />

Hartmann S, Martin-Subero JI, Gesk S, Hüsken J, Giefing M, Nagel I, Riemke J, Chott A, Klapper W,<br />

Parrens M, Merlio JP, Küppers R, Bräuninger A, Siebert R and Hansmann ML<br />

Detection of genomic imbalances in microdissected Hodgkin and Reed-Sternberg cells of<br />

classical Hodgkin's lymphoma by array-based comparative genomic hybridization.<br />

Haematologica, 2008, 93,9: 1318-1326<br />

Hartmann A, Dietmaier W, Hofstädter F, Burgart LJ, Cheville JC and Blaszyk H<br />

Urothelial carcinoma of the upper urinary tract: Inverted growth pattern is predictive of<br />

microsatellite instability.<br />

Hum Pathol, 2003, 34,3: 222-227<br />

Hartmann A, Schlake G, Zaak D, Hungerhuber E, Hofstetter A, Hofstaedter F and Knuechel R<br />

Occurrence of chromosome 9 and p53 alterations in multifocal dysplasia and carcinoma In Situ<br />

of human urinary bladder.<br />

Cancer Res, 2002, 62: 809-818<br />

Hartmann A, Rösner U, Schlake G, Dietmaier W, Zaak D, Hofstaedter F and Knuechel R<br />

Clonality and genetic divergence in multifocal low-grade superficial urothelial carcinoma as<br />

determined by chromosome 9 and p53 deletion analysis.<br />

Lab Invest, 2000, 80,5: 709-718<br />

Hartmann S, Bergmann M, Bohle RM, Weidner W and Steger K<br />

Genetic imprinting during impairing spermatogenesis.<br />

Mol Hum Reprod, 2006, 52,6: 1127-1137<br />

Hashimoto M, Aoki M, Winblad B, Tjernberg LO.<br />

A novel approach for Aβ₁₋₄₀ quantification using immuno-PCR.<br />

J Neurosci Methods. 2012 Apr 15;205(2):364-7. PubMed PMID: 22327103. PubMed<br />

Hasse U, Tinguely M, Opplinger Leibundgut E, Cajot J-F, Garvin AM, Tobler A, Borisch B and Fey MF<br />

Clonal loss of heterozygosity in microdissected Hodgkin and Reed-Sternberg cells.<br />

J Nat Cancer Inst, 1999, 91,18: 1581-1583<br />

Hasselblatt M, Mertsch S, Koos B, Riesmeier B, Stegemann H, Jeibmann A, Tomm M, Schmitz N, Wrede<br />

B, Wolff JE, Zheng W and Paulus W<br />

TWIST-1 is overexpressed in neoplastic choroid plexus epithelial cells and promotes<br />

proliferation and invasion.<br />

Cancer Res, 2009, 69,6: 2219-2223<br />

Heel K and Dawkins H<br />

Laser microdissection and optical tweezers in research.<br />

Today’s Life Science, 2001, 13,2: 41-48<br />

Heinmöller E, Bockholt A, Werther M, Ziemer M, Müller A, Ghadimi M and Rüschoff J<br />

Laser microdissection of small tissue samples – Application to chronic pancreatitis tissues.<br />

Pathol Res Pract, 2003, 199: 363-371<br />

Heinmöller E, Renke B, Beyser K, Dietmaier W, Langner, C and Rüschoff J<br />

Pitfalls in diagnostic molecular pathology – significance of sampling error.<br />

Virchows Arch, 2001, 439: 504-511<br />

Heisler LK, Pronchuk N, Nonogaki K, Zhou L, Raber J, Tung L, Yeo GS, O'Rahilly S, Colmers WF, Elmquist<br />

JK and Tecott LH<br />

Serotonin activates the hypothalamic-pituitary-adrenal axis via serotonin 2C receptor<br />

stimulation.<br />

J Neurosci, 2007, 27,26: 6956-6964<br />

October 2012 26/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Helfrich I, Scheffrahn I, Bartling S, Weis J, Felbert V, Middleton M, Kato M, Ergün S and Schadendorf D<br />

Resistance to antiangiogenic therapy is directed by vascular phenotype, vessel stabilization,<br />

and maturation in malignant melanoma.<br />

J Exp Med, 2010, 207,3: 491-503<br />

Hellwinkel OJ, Rogmann JP, Asong LE, Luebke AM, Eichelberg C, Ahyai S, Isbarn H, Graefen M, Huland H<br />

and Schlomm T<br />

A comprehensive analysis of transcript signatures of the phosphatidylinositol-3 kinase/protein<br />

kinase B signal-transduction pathway in prostate cancer.<br />

BJU Int, 2008, 101,11: 1454-1460<br />

Herbert C, Hettiaratchi A, Webb DC, Thomas PS, Foster PS and Kumar RK<br />

Suppression of cytokine expression by roflumilast and dexamethasone in a model of chronic<br />

asthma.<br />

Clin Exp Allergy, 2008, 38,5: 847-856<br />

Herfs M, Hubert P, Suarez-Carmona M, Reschner A, Saussez S, Berx G, Savagner P, Boniver J and<br />

Delvenne P<br />

Regulation of p63 isoforms by snail and slug transcription factors in human squamous cell<br />

carcinoma.<br />

Am J Pathol, 2010, 176,4: 1941-1949<br />

Hergenhahn M, Kenzelmann M and Gröne HJ<br />

Laser-controlled microdissection of tissues opens a window of new opportunities.<br />

Pathol Res Pract, 2003, 199: 419-423<br />

De Hertogh G, Aerssens J, de Hoogt R, Peeters P, Verhasselt P, Van Eyken P, Ectors N, Vermeire S,<br />

Rutgeerts P, Coulie B and Geboes K<br />

Validation of 16S rDNA sequencing in microdissected bowel biopsies from Crohn´s disease<br />

patients to assess bacterial flora diversity.<br />

J Pathol, 2006, 209,4: 532-539<br />

Hijjawi NS, Meloni BP, Ryan UM, Olson ME and Thompson RCA<br />

Successful in vitro cultivation of Cryptosporidium andersoni: evidence for the existence of<br />

novel extracellular stages in the life cycle and implications for the classification of<br />

Cryptosporidium.<br />

Int J Parasitol, 2002, 32: 1719-1726<br />

Ho CL, Kurman RJ, Dehari R, Wang TL and Shih IM<br />

Mutations of BRAF and KRAS precede the development of ovarian serious borderline tumors.<br />

Cancer Res, 2004, 64: 6915-6918<br />

Hodgin JB, Borczuk AC, Nasr SH, Markowitz GS, Nair V, Martini S, Eichinger F, Vining C, Berthier CC,<br />

Kretzler M and d'Agati VD<br />

A molecular profile of focal segmental glomerulosclerosis from formalin-fixed, paraffinembedded<br />

tissue.<br />

Am J Pathol, 2010, 177,4: 1674-1686<br />

Hölschermann H, Bohle RM, Schmidt H, Zeller H, Fink L, Stahl U, Grimm H, Tillmanns H, Haberbosch W<br />

Hirudin reduces tissue factor expression and attenuates graft arteriosclerosis in rat cardiac<br />

allografts.<br />

Circulation, 2000, 102: 357-363<br />

Hölsken A, Kreutzer J, Hofmann BM, Hans V, Oppel F, Buchfelder M, Fahlbusch R,<br />

Blümcke I and Buslei R<br />

Target gene activation of the Wnt signaling pathway in nuclear beta-catenin accumulating<br />

cells of adamantinomatous craniopharyngiomas.<br />

Brain Pathol, 2009, 19,3: 357-364<br />

Hofbauer M, Wiesener S, Babbe H, Roers A, Wekerle H, Dornmair K, Hohlfeld R and Goebels N<br />

Clonal tracking of autoaggressive T cells in polymyositis by combining laser microdissection,<br />

single-cell PCR, and CDR3-spectratype analysis.<br />

PNAS, 2003, 100: 4090-4095<br />

Hoffman AC, Danenberg KD, Taubert H, Danenberg PV and Wuerl P<br />

A three-gene signature for outcome in soft tissue sarcoma.<br />

Clin Cancer Res, 2009, 15,16: 5191-5198<br />

October 2012 27/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Hoffmann AC, Wild P, Leicht C, Bertz S, Danenberg KD, Danenberg PV, Stöhr R, Stöckle M, Lehmann J,<br />

Schuler M and Hartmann A<br />

MDR1 and ERCC1 expression predict outcome of patients with locally advanced bladder cancer<br />

receiving adjuvant chemotherapy.<br />

Neoplasia, 2010, 12,8: 628-636<br />

Hoffmann AC, Mori R, Vallbohmer D, Brabender J, Drebber U, Baldus SE, Klein E, Azuma M, Metzger R,<br />

Hoffmann C, Hoelscher AH, Danenberg KD, Prenzel KL and Danenberg PV<br />

High expression of heparanase is significantly associated with dedifferentiation and lymph<br />

node metastasis in patients with pancreatic ductal adenocarcinomas and correlated to PDGFA<br />

and via HIF1a to HB-EGF and bFGF.<br />

J Gastrointest Surg, 2008, 12,10: 1674-1681<br />

Hoffmann AC, Mori R, Vallbohmer D, Brabender J, Klein E, Drebber U, Baldus SE, Cooc J, Azuma M,<br />

Metzger R, Hoelscher AH, Danenberg KD, Prenzel KL and Danenberg PV<br />

High expression of HIF1a is a predictor of clinical outcome in patients with pancreatic ductal<br />

adenocarcinomas and correlated to PDGFA, VEGF, and bFGF.<br />

Neoplasia, 2008, 10,7: 674-679<br />

Hoffmann M, Gaikwad J, Schmalz G, Cavender A and D’Souza R<br />

Analysis of odontoblast gene expression using a novel approach, Laser Capture<br />

Microdissection.<br />

Connect Tissue Res, 2002, 43: 376-380<br />

Hoffmann M, Olson K, Cavender A, Pasqualini R, Gaikwad J and D’Souza RN<br />

Gene expression in a pure population of odontoblasts isolated by laser-capture<br />

microdissection.<br />

J Dent Res, 2001, 80,11: 1963-1967<br />

Hofnagel O, Luechtenborg B, Stolle K, Lorkowski S, Eschert H, Plenz G and Robenek H<br />

Proinflammatory cytokines regulate LOX-1 expression in vascular smooth muscle cells.<br />

Arterioscler Thromb Vasc Biol, 2004, 24: 1789-1795<br />

Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N and Küster H<br />

Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots,<br />

including CAAT-box transcription factor gene expression correlating with fungal contact and<br />

spread.<br />

Plant Physiol, 2011, 157,4: 2023-2043<br />

Ho Hong S, Young Nah H, Yoon Lee J, Chan Gye M, Hoon Kim C and Kyoo Kim M<br />

Analysis of estrogen-regulated genes in mouse uterus using cDNA microarray and laser<br />

capture microdissection.<br />

J Endocrinol, 2004, 181: 157-167<br />

Hoivik EA, Aumo L, Aesoy R, Lillefosse H, Lewis AE, Perrett RM, Stallings NR, Hanley NA and Bakke M<br />

Deoxyribonucleic acid methylation controls cell type-specific expression of steroidogenic<br />

factor 1.<br />

Endocrinology, 2008, 149,11: 5599-5609<br />

Hong SM, Vincent A, Kanda M, Leclerc J, Omura N, Borges M, Klein AP, Canto MI, Hruban RH, Goggins M.<br />

Genome-Wide Somatic Copy Number Alterations in Low-Grade PanINs and IPMNs from<br />

Individuals with a Family History of Pancreatic Cancer.<br />

Clin Cancer Res. 2012 Aug 15;18(16):4303-12. PubMed<br />

Hong YS, Kang S, Han M, Gobert GN and Jones MK<br />

High quality RNA isolation from Aedes aegypti midguts using laser microdissection<br />

microscopy.<br />

Parasit Vectors, 2011, 4,1: 83<br />

Hong SH, Nah HY and Kim CH<br />

Estrogen-regulated expression and distribution of Id-1 in the mouse uterus.<br />

Placenta, 2010, 31,3: 240-244<br />

Hose KA, Häffner K, Fietz D, Gromoll J, Eckert T, Kliesch S, Siebert HC and Bergmann M<br />

A novel sequence variation in the transactivation regulating domain of the human androgen<br />

receptor.<br />

Fertil Steril, 2009, 92,1: e9-390<br />

October 2012 28/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Hourez R, Servais L, Orduz D, Gall D, Millard I, de Kerchove d'Exaerde A, Cheron G, Orr HT, Pandolfo M,<br />

Schiffmann SN.<br />

Aminopyridines correct early dysfunction and delay neurodegeneration in a mouse model of<br />

spinocerebellar ataxia type 1.<br />

J Neurosci. 2011 Aug 17;31(33):11795-807. PubMed<br />

Hu C, Wei W, Chen X, Woodman CB, Yao Y, Nicholls JM, Joab I, Sihota SK, Shao JY, Derkaoui KD, Amari<br />

A, Maloney SL, Bell AI, Murray PG, Dawson CW, Young LS, Arrand JR.<br />

A global view of the oncogenic landscape in nasopharyngeal carcinoma: an integrated analysis<br />

at the genetic and expression levels.<br />

PLoS One. 2012;7(7):e41055. PubMed<br />

Huang Q, Choy KW, Cheung KF, Lam DSC, Fu WL and Pang CP<br />

Genetic alterations on chromosome 19, 20, 21, 22, and X detected by loss of heterozygotity<br />

analysis in retinoblastoma.<br />

Mol Vis, 2003, 9: 502-507<br />

Hughes S, Pothecary CA, Jagannath A, Foster RG, Hankins MW, Peirson SN.<br />

Profound defects in pupillary responses to light in TRPM-channel null mice: a role for TRPM<br />

channels in non-image-forming photoreception.<br />

Eur J Neurosci. 2012 Jan;35(1):34-43. doi: 10.1111/j.1460-9568.2011.07944.x. PubMed<br />

Hughes PA, Brierley SM, Young RL and Blackshaw LA<br />

Localization and comparative analysis of acid-sensing ion channel (ASIC1, 2, and 3) mRNA<br />

expression in mouse colonic sensory neurons within thoracolumbar dorsal root ganglia.<br />

J Comp Neurol, 2007, 500,5: 863-875<br />

Huizar I, Malur A, Midgette YA, Kukoly C, Chen P, Ke PC, Podila R, Rao AM, Wingard CJ, Dobbs L, Barna<br />

BP, Kavuru MS and Thomassen MJ<br />

Novel murine model of chronic granulomatous lung inflammation elicited by carbon<br />

nanotubes.<br />

Am J Respir Cell Mol Biol, 2011, 45,4: 858-866<br />

Hu-Lieskovan S, Vallbohmer D, Zhang W, Yang D, Pohl A, Labonte M, Grimminger PP, Hölscher AH,<br />

Semrau R, Arnold D, Dellas K, Debucquoy A, Haustermans K, Machiels JP, Sempoux C, Rödel C, Bracko<br />

M, Velenik V and Lenz HJ<br />

EGF61 polymorphism predicts complete pathologic response to cetuximab-based<br />

chemoradiation independent of KRAS status in locally advanced rectal cancer patients.<br />

Clin Cancer Res, 2011, 17,15: 5161-5169<br />

Hussein K<br />

Gene expression profiling in laser-microdissected bone marrow megakaryocytes.<br />

Methods Mol Biol, 2011, 755: 429-439<br />

Hussein K, von Neuhoff N, Büsche G, Buhr T, Kreipe H and Bock O<br />

Opposite expression pattern of Src kinase Lyn in acute and chronic haematological<br />

malignancies.<br />

Ann Hematol, 2009, 88,11: 1059-1067<br />

Hussein K, Theophile K, Dralle W, Wiese B, Kreipe H and Bock O<br />

MicroRNA expression profiling of megakaryocytes in primary myelofibrosis and essential<br />

thrombocythemia.<br />

Platelets, 2009, 20,6: 391-400<br />

Hussein K, Dralle W, Theophile K, Kreipe H and Bock O<br />

Megakaryocytic expression of miRNA 10a, 17-5p, 20a and 126 in Philadelphia chromosomenegative<br />

myeloproliferative neoplasm.<br />

Ann Hematol, 2009, 88,4: 325-332<br />

Hvid H, Klopfleisch R, Vienberg S, Hansen BF, Thorup I, Jensen HE and Oleksiewicz MB<br />

Unique expression pattern of the three insulin receptor family members in the rat mammary<br />

gland: dominance of IGF-1R and IRR over the IR, and cyclical IGF-1R expression.<br />

J Appl Toxicol, 2011, 31,4: 312-328<br />

October 2012 29/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Ibe T, Shimizu K, Nakano T, Kakegawa S, Kamiyoshihara M, Nakajima T, Kaira K, and Takeyoshi I<br />

High-grade neuroendocrine carcinoma of the lung shows increased thymidylate synthase<br />

expression compared to other histotypes.<br />

J Surg Oncol, 2010, 102,1: 11-17<br />

Ikenaga N, Ohuchida K, Mizumoto K, Yu J, Fujita H, Nakata K, Ueda J, Sato N, Nagai E and Tanaka M<br />

S100A4 mRNA is a diagnostic and prognostic marker in pancreatic carcinoma.<br />

J Gastrointest Surg, 2009, 13,10: 1852-1858<br />

Imamichi Y, Koebernick K and Wedlich D<br />

Prospects for tissue-specific analysis of gene expression in Xenopus embryos through lasermediated<br />

microdissection of histological sections.<br />

Pathol Res Pract, 2003, 199: 381-389<br />

Imamichi Y, Lahr G, Wedlich D<br />

Laser-mediated microdissection of paraffin sections from Xenopus embryos allows detection<br />

of tissue-specific expressed mRNAs.<br />

Dev Genes Evol, 2001, 211: 361-366<br />

Immervoll H, Hoem D, Kugarajh K, Steine SJ and Molven A<br />

Molecular analysis of the EGFR-RAS-RAF pathway in pancreatic ductal adenocarcinomas: lack<br />

of mutations in the BRAF and EGFR genes.<br />

Virchows Arch, 2006, 448,6: 778-796<br />

Irié T, Aida T and Tachikawa T<br />

Gene expression profiling of oral squamous cell carcinoma using laser microdissection and<br />

cDNA microarray.<br />

Mod Electron Microsc, 2004, 37: 89-96<br />

Ivanidze J, Hoffmann R, Lochmüller H, Engel AG, Hohlfeld R and Dornmair K<br />

Inclusion body myositis: laser microdissection reveals differential up-regulation of IFN-γ<br />

signaling cascade in attacked versus nonattacked myofibers.<br />

Am J Pathol, 2011, 179,3: 1347-1359<br />

Ivashikina N, Deeken R, Ache P, Kranz E, Pommerrenig B, Sauer N and Hedrich R<br />

Isolation of AtSUC2 promoter-GFP-marked companion cells for patch-clamp studies and<br />

expression profiling.<br />

Plant J, 2003, 36,6: 931-945<br />

Jaeger J, Koczan D, Thiesen HJ, Ibrahim SM, Gross G, Spang R and Kunz M<br />

Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in<br />

laser-microdissected melanoma tissues.<br />

Clin Cancer Res, 2007, 13,3: 806-815<br />

Jakob C, Liersch T, Meyer W, Becker H, Baretton GB and Aust DE<br />

Predictive value of Ki67 and p53 in locally advanced rectal cancer: Correlation with<br />

thymidylate synthase and histopathological tumor regression after neoadjuvant 5-FU-based<br />

chemoradiotherapy.<br />

World J Gastroenterol, 2008, 14,7: 1060-1066<br />

Jakob C, Aust DE, Meyer W, Baretton GB, Schwabe W, Häusler P, Becker H and Liersch T<br />

Thymidylate synthase, thymidine phosphorylase, dihydropyrimidine dehydrogenase<br />

expression, and histological tumour regression after 5-FU-based neo-adjuvant chemoradiotherapy<br />

in rectal cancer.<br />

J Pathol, 2004, 204: 562-568<br />

Jang JY, Park YC, Song YS, Lee SE, Hwang DW, Lim CS, Lee HE, Kim WH and Kim SW<br />

Increased K-ras mutation and expression of S100A4 and MUC2 protein in the malignant<br />

intraductal papillary mucinous tumor of the pancreas.<br />

J Hepatobiliary Pancreat Surg, 2009, 16,5: 668-674<br />

Janin A, Murata H, Leboeuf C, Cayuela JM, Gluckman E, Legrès L, Desveaux A, Varna M, Ratajczak P,<br />

Soulier J, de Thé H, Bertheau P and Socié G<br />

Donor-derived oral squamous cell carcinoma after allogeneic bone marrow transplantation.<br />

Blood, 2009, 113,8: 1834-1840<br />

October 2012 30/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Jasik J, Schiebold S, Rolletschek H, Denolf P, Van Adenhove K, Altmann T and Borisjuk L<br />

Subtissue-specific evaluation of promoter efficiency by quantitative fluorometric assay in laser<br />

microdissected tissues of rapeseed.<br />

Plant Physiol, 2011, 157,2: 563-573<br />

Jazayeri A, Falck J, Lukas C, Bartek J, Smith GC, Lukas J and Jackson SP<br />

ATM-and cell cycle-dependent regulation of ATR in response to DNA double-strand breaks.<br />

Nat Cell Biol, 2006, 8,1: 37-45<br />

Jensen LH, Kuramochi H, Crüger DG, Lindebjerg J, Kolvraa S, Danenberg P, Danenberg K and Jakobsen A<br />

Gene expression of the mismatch repair gene MSH2 in primary colorectal cancer.<br />

Tumour Biol, 2011, 32,5: 977-983<br />

Jeung HC, Rha SY, Shin SJ, Lim SJ, Roh JK, Noh SH and Chung HC<br />

Predictive values of 5-fluorouracil pathway genes for S-1 treatment in patients with advanced<br />

gastric cancer.<br />

Anticancer Drugs, 2011, 22,8: 801-810<br />

Jia Y, Lisch DR, Ohtsu K, Scanlon MJ, Nettleton D and Schnable PS<br />

Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and<br />

unexpected changes in the expression of transposons, genes, and 24-nt small RNAs.<br />

PLoS Genet, 2009, 5,11: e10000737<br />

Jiménez N, Post JA.<br />

A Novel Approach for Intracellular 3D Immuno-Labeling for Electron Tomography.<br />

Traffic. 2012 Jul;13(7):926-33. doi: 10.1111/j.1600-0854.2012.01363.x. PubMed<br />

Jo N, Wu G-S and Rao Na<br />

Upregulation of chemokine expression in the retinal vasculature in ischemia-reperfusion<br />

injury.<br />

Invest Ophtalmol, 2003, 44,9: 4054-4060<br />

Joglekar MV, Wei C and Hardikar AA<br />

Quantitative estimation of multiple microRNAs and mRNAs from a single cell.<br />

Cold Spring Harb Protoc, 2010: 1-29<br />

Johansson A, Rudolfsson S, Hammarsten P, Halin S, Pietras K, Jones J, Stattin P, Egevad L, Granfors T,<br />

Wikström P and Bergh A<br />

Mast cells are novel independent prognostic markers in prostate cancer and represent a target<br />

for therapy.<br />

Am J Pathol, 2010, 177,2: 1031-1041<br />

Jones KB, Piombo V, Searby C, Kurriger G, Yang B, Grabellus F, Roughley PJ, Morcuende JA, Buckwalter<br />

JA, Capecchi MR, Vortkamp A and Sheffield VC<br />

A mouse model of osteochondromagenesis from clonal inactivation of Ext1 in chondrocytes.<br />

PNAS USA, 2010, 107,5: 2054-2059<br />

Jones KJ, Randall LM, McManus DP and Engwerda CR<br />

Laser microdissection microscopy in parasitology: microscopes meet thermocyclers.<br />

Trends in Parasitol, 2004, 20,11: 502-506<br />

Joseph A and Gnanapragasam V<br />

Laser microdissection: a day for answers.<br />

Therapy, 2010, 7,5: 551-554<br />

Jovanovic Z, Tung YC, Lam BY, O'Rahilly S and Yeo GS<br />

Identification of the global transcriptomic response of the hypothalamic arcuate nucleus to<br />

fasting and leptin.<br />

J Neuroendocrinol, 2010, 22,8: 915-925<br />

Judex M, Neumann E, Lechner S, Dietmaier W, Ballhorn W Grifka J, Gay S, Schölmerich J, Kullmann F<br />

and Müller-Ladner U<br />

Laser-mediated microdissection facilitates analysis of area-specific gene expression in<br />

rheumatoid synovium.<br />

Arthritis Rheum, 2003, 48: 97-102<br />

October 2012 31/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Julian E, Dave RK, Robson JP, Hallahan AR and Wainwright BJ<br />

Canonical Notch signaling is not required for the growth of Hedgehog pathway-induced<br />

medulloblastoma.<br />

Oncogene, 2010, 29,24: 3465-3476<br />

Junker A, Ivanidze J, Malotka J, Eiglmeier I, Lassmann H, Wekerle H, Meinl E,<br />

Hohlfeld R and Dornmair K<br />

Multiple sclerosis: T-cell receptor expression in distinct brain regions.<br />

Brain, 2007, 130: 2789-2799<br />

Kakehashi A, Inoue M, Wei M, Fukushima S and Wanibuchi H<br />

Cytokeratin 8/18 overexpression and complex formation as an indicator of GST-P positive foci<br />

transformation into hepatocellular carcinomas.<br />

Toxicol Appl Pharmacol, 2009, 238,1: 71-79<br />

Kalamarides M, Niwa-Kawakita M, Leblois H, Abramowski V, Perricaudet M, Janin A, Thomas G, Gutmann<br />

DH and Giovanni M<br />

Nf2 gene inactivation in arachnoidal cells is rate-limiting for meningioma development in the<br />

mouse.<br />

Genes Dev, 2002, 16,9: 1060-1065<br />

Kalies K, König P, Zhang YM, Deierling M, Barthelmann J, Stamm C and Westermann J<br />

Nonoverlapping expression of IL10, IL12p40, and IFNgamma mRNA in the marginal zone and<br />

T cell zone of the spleen after antigenic stimulation.<br />

J Immunol, 2008, 180,8: 5457-5465<br />

Kalies K, Blessenohl M, Nietsch J and Westermann J<br />

T cell Zones of lymphoid organs constitutively express Th1 cytokine mRNA: Specific changes<br />

during the early phase of an immune response.<br />

J Immunol, 2006, 176: 741-749<br />

Kam R, Chen J, Blümcke I, Normann S, Fassunke J, Elger CE, Schramm J, Wiestler OD and Becker AJ<br />

The reelin pathway components disabled-1 and p35 in gangliogliomas - a mutation and<br />

expression analysis.<br />

Neuropathol Appl Neurobiol, 2003, 30: 225-232<br />

Kamphuis W, Dijk F and O’Brien BJ<br />

Gene expression of AMPA-type glutamate receptor subunits in rod-type ON bipolar cells of rat<br />

retina.<br />

Eur J Neurosci, 2003, 18: 1085-1092<br />

Kanazawa T, Adachi E, Orimo S, Nakamura A, Mizusawa H and Uchihara T<br />

Pale neurites, premature α-synuclein aggregates with centripetal extension from axon<br />

collaterals.<br />

Brain Pathol, 2011, in press<br />

Kaneda M, Okano M, Nata K, Sado T, Tsujimoto N, Li E and Sasaki H<br />

Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting.<br />

Nature, 2004, 429: 900-903<br />

Kang Y, Norris MH, Zarzycki-Siek J, Nierman WC, Donachie SP and Hoang TT<br />

Transcript amplification from single bacterium for transcriptome analysis.<br />

Genome Res, 2011, 21,6: 925-935<br />

Kaserer K, Schmaus J, Bethge U, Migschitz B, Fasching S, Walch A, Herbst F, Teleky B and Wrba F<br />

Staining patterns of p53 immunohistochemistry and their biological significance in colorectal<br />

cancer.<br />

J Pathol, 2000, 190: 450-456<br />

Kawai K, Horiike N, Michitaka K and Onji M<br />

The effects of hepatitis B virus core promoter mutations on hepatitis B core antigen<br />

distribution in hepatocytes as detected by laser-assisted microdissection.<br />

J Hepatol, 2003, 38: 635-641<br />

Kayashima T, Nakata K, Ohuchida K, Ueda J, Shirahane K, Fujita H, Cui L, Mizumoto K and Tanaka M<br />

Insig2 is overexpressed in pancreatic cancer and its expression is induced by hypoxia.<br />

Cancer Sci, 2011, 102,6: 1137-1143<br />

October 2012 32/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kehr J<br />

Single cell technology.<br />

Curr Opin Plant Biol, 2003, 6,6: 617-621<br />

Kela I, Harmelin A, Waks T, Orr-Urtreger A, Domany E and Eshhar Z<br />

Interspecies comparison of prostate cancer gene-expression profiles reveals genes associated<br />

with aggressive tumors.<br />

Prostate, 2009, 69,10: 1034-1044<br />

Kemper B, Langehanenberg P, Höink A, von Bally G, Wottowah F, Schinkinger S, Guck J, Käs J,<br />

Bredebusch I, Schnekenburger J and Schütze K<br />

Monitoring of laser micromanipulated optically trapped cells by digital holographic microscopy.<br />

J Biophotonics, 2010, 3,7: 425-431<br />

Kenngott RA, Vermehren M, Sauer U, Ebach K and Sinowatz F<br />

Cellular expression and localization of estrogen receptor {α} and progesterone receptor mRNA<br />

in the bovine oviduct combining laser-assisted microdissection, quantitative PCR, and in situ<br />

hybridization.<br />

J Histochem Cytochem, 2011, 59,3: 312-327<br />

Kenngott R, Al-Banaw A, Vermehren M, Wendl J and Sinowatz F<br />

Application of laser-assisted microdissection for gene expression analysis of mammalian germ<br />

cells.<br />

Anat Histol Embryol, 2010, 39,3: 219-226<br />

Khoshnaw SM, Powe DG, Ellis IO and Green AR<br />

Detection and quantification of microRNAs in laser-microdissected formalin-fixed paraffinembedded<br />

breast cancer tissues.<br />

Methods Mol Biol, 2011, 755: 119-142<br />

Kikumoto Y, Sugiyama H, Inoue T, Morinaga H, Takiue K, Kitagawa M, Fukuoka N, Saeki M, Maeshima Y,<br />

Wang DH, Ogino K, Masuoka N and Makino H<br />

Sensitization to alloxan-induced diabetes and pancreatic cell apoptosis in acatalasemic mice.<br />

Biochim Biophys Acta, 2010, 1802,2: 240-246<br />

Kim SM, Bhonsle L, Besgen P, Nickel J, Backes A, Held K, Vollmer S, Dornmair K, Prinz JC.<br />

Analysis of the Paired TCR α- and β-chains of Single Human T Cells.<br />

PLoS One. 2012;7(5):e37338. PubMed PMID: 22649519. PubMed<br />

Kim KH, Choi JS, Kim JM, Choi YL, Shin YK, Lee HC, Seong IO, Kim BK, Chae SW and Kim SH<br />

Enhanced CD24 expression in endometrial carcinoma and its expression pattern in normal and<br />

hyperplastic endometrium.<br />

Histol Histopathol, 2009, 24,3: 309-316<br />

Kim K, Kumagai J, Eishi Y, Ishige I, Ishige Y and Koike M<br />

Clonality analysis for normal and cancerous colon tissues with human androgen receptor gene<br />

polymerase chain reaction.<br />

J Med Dent Sci, 2005, 52: 163-170<br />

Kim JO, Kim HN, Hwang MH, Shin HI, Kim SY, Park RW, Park EY, Kim IS, van Wijnen J, Stein JL, Lian JB,<br />

Sein GS and Choi JY<br />

Differential gene expression analysis using paraffin-embedded tissues after laser microdissection.<br />

J Cell Biochem, 2003, 90: 998-1006<br />

Kimura Y, Kouda H, Eishi Y, Kobayashi D, Suzuki Y, Ishige I, Iino Y and Kitamura K<br />

Detection of mitochondrial DNA from human inner ear using real-time polymerase chain<br />

reaction and laser microdissection.<br />

Acta Otolaryngol, 2005, 125: 697-701<br />

King TA, Li W, Brogi E, Yee CJ, Gemignani ML, Olvera N, Levine DA, Norton L, Robson ME, Offit K, Borgen<br />

PI and Boyd J<br />

Heterogenic loss of the wild-type BRCA allele in human breast tumorigenesis.<br />

Ann Surg Oncol, 2007, 14,9: 2510-2518<br />

October 2012 33/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kirches E, Krause G, Warich-Kirches M, Weis S, Schneider T, Meyer-Puttlitz B Mawrin C and Dietzmann K<br />

High frequency mitochondrial DNA mutations in glioblastoma multiforme identified by direct<br />

sequence comparison to blood samples.<br />

Int J Cancer, 2001, 93: 534-538<br />

Kirches E, Michael M, Warich-Kirches M, Schneider T, Weis S, Krause G, Mawrin C and Dietzmann K<br />

Heterogeneous tissue distribution of a mitochondrial DNA polymorphism in heteroplasmic<br />

subjects without mitochondrial disorders.<br />

J Med Genet, 2001, 38: 312-317<br />

Kittaka D, Itoh MI, Ohmi Y, Kondo Y, Fukumoto S, Urano T, Tajima O, Furukawa K and Furukawa K<br />

Impaired hypoglossal nerve regeneration in the mutant mice lacking complex gangliosides:<br />

down-regulation of neurotrophic factors and receptors as possible mechanisms.<br />

Glycobiology, 2008, 18,7: 509-516<br />

Kleeberger W, Versmold A, Rothämel T, Glöckner S, Bredt M, Haverich A, Lehmann U and Kreipe H<br />

Increased chimerism of bronchial and alveolar epithelium in human lung allografts undergoing<br />

chronic injury.<br />

Am J Pathol, 2003, 162,5: 1487-1494<br />

Kleeberger W, Rothämel T, Glöckner S, Flemming P, Lehmann U and Kreipe H<br />

High frequency of epithelial chimerism in liver transplants demonstrated by microdissection<br />

and STR-analysis.<br />

Hepatology, 2002, 35,1: 110-116<br />

Kleeberger W, Rothämel T, Glöckner S, Lehmann U and Kreipe H<br />

Laser-assisted microdissection and short tandem repeat PCR for the investigation of graft<br />

chimerism after solid organ transplantation.<br />

Pathobiology, 2000, 68: 196-201<br />

Klein CA, Wilke M, Pool J, Vermeulen C, Blokland E, Burghart E, Krostina S, Wendler N, Passlick B,<br />

Riethmueller G and Goulmy E<br />

The hematopoietic system-specific minor histocompatibility antigen HA-1 shows aberrant<br />

expression in epithelial cancer cells.<br />

J Exp Med, 2002, 196,3: 359-368<br />

Klitgaard K, Mølbak L, Jensen TK, Lindboe CF and Boye M<br />

Laser capture microdissection of bacterial cells targeted by fluorescence in situ hybridization.<br />

BioTechniques, 2005, 39,6: 864-868Klopfleisch R, Klose P and Gruber AD<br />

The combined expression pattern of BMP2, LTBP4, and DERL1 discriminates malignant from<br />

benign canine mammary tumors.<br />

Vet Pathol, 2010, 47,3: 446-454<br />

Klopfleisch R, Klose P, da Costa A, Brunnberg L and Gruber AD<br />

HEPACAM1 and 2 are differentially regulated in canine mammary adenomas and carcinomas<br />

and its lymph node metastases.<br />

BMC Vet Res, 2010, 6:15<br />

Klopfleisch R and Gruber AD<br />

Increased expression of BRCA2 and RAD51 in lymph node metastases of canine mammary<br />

adenocarcinomas.<br />

Vet Pathol, 2009, 46,3: 416-422<br />

Klopfleisch R and Gruber AD<br />

Differential expression of cell cycle regulators p21, p27 and p53 in metastasizing canine<br />

mammary adenocarcinomas versus normal mammary glands.<br />

Res Vet Sci, 2009, 87,1: 91-96<br />

Klussmann JP, Weissenborn SJ, Wieland U, Dries V, Eckel HE, Pfister HJ and Fuchs PG<br />

Human papillomavirus-positive tonsillar carcinomas: A different tumor entity?<br />

Med Microbiol Immunol, 2003, 192: 129-132<br />

October 2012 34/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Klussmann JP, Gültekin E, Weissenborn SJ, Wieland U, Dries V, Dienes HP, Eckel HE, Pfister HJ and Fuchs<br />

PG<br />

Expression of p16 protein identifies a distinct entity of tonsillar carcinomas associated with<br />

human papillomavirus.<br />

Am J Pathol, 2003, 162,3: 747-753<br />

Klussmann JP, Weissenborn SJ, Wieland U, Dries V, Kolligs J, Jungehuelsing M, Eckel HE, Dienes HP,<br />

Pfister HJ and Fuchs PG<br />

Prevalence, distribution, and viral load of human papillomavirus 16 DNA in tonsillar<br />

carcinomas.<br />

Cancer, 2001, 92: 2875-2884<br />

Knöll A, Stoehr R, Jilg W and Hartmann A<br />

Low frequency of human polyomavirus BKV and JCV DNA in urothelial carcinomas of the renal<br />

pelvis and renal cell carcinomas.<br />

Oncol Rep, 2003, 10: 487-491<br />

Ko Y, Hahn T, Lu H, Ma ZL, Chen J, Rothe M, Florin A, Fronhoffs S, Albers P, Sachinidis A, Vetter H,<br />

Kaminski A, Behrens P, Wellmann A and Wernert N<br />

A novel component of the ubiquitin pathway, ubiquitin carboxyl extension protein 1<br />

overexpressed in prostate cancer.<br />

Int J Mol Med, 2005, 15: 183-196<br />

Kobayashi H, Sugihara K, Uetake H, Higuchi T, Yasuno M, Enomoto M, Iida S, Azuma M, Mori R, Omori A,<br />

Lenz HJ, Danenberg KD and Danenberg PV<br />

Messenger RNA expression of TS and ERCC1 in colorectal cancer and matched liver metastasis.<br />

Int J Oncol, 2008, 33,6: 1257-1262<br />

Kobayashi H, Sugihara K, Uetake H, Higuchi T, Yasuno M, Enomoto M, Kuramochi<br />

H, Lenz HJ, Danenberg KD and Danenberg PV<br />

Messenger RNA expression of vascular endothelial growth factor and its receptors in primary<br />

colorectal cancer and corresponding liver metastasis.<br />

Ann Surg Oncol, 2008, 15,4: 1232-1238<br />

Koda H, Kimura Y, Ishige I, Eishi Y, Iino Y and Kitamura K<br />

Quantitative cellular level analysis of mitochondrial DNA 3243A>G mutations in individual<br />

tissues from the archival temporal bones of a MELAS patient.<br />

Acta Otolaryngol, 2010, 130,3: 344-350<br />

Kögler G, Sensken S, Airey JA, Trapp T, Müschen M, Feldhahn N, Liedtke S, Sorg RV, Fischer J,<br />

Rosenbaum C, Greschat S, Knipper A, Bender J, Degistirici Ö, Gao J, Caplan AI, Colletti EJ, Almeida-<br />

Porada G, Müller HW, Zanjani E and Wernet P<br />

A new human somatic stem cell from placental cord blood with intrinsic pluripotent<br />

differentiation potential.<br />

J Exp Med, 2004, 200: 123-135<br />

Koene GPJA, Arts-Hilkes YHA, van der Ven KJW, Rozemuller EH, Slootweg PJ, de Weger RA and Tilanus<br />

MGJ<br />

High level of chromosome 15 aneuploidy in head and neck squamous cell carcinoma lesions<br />

identified by FISH analysis: limited value of ß2-microglobulin LOH analysis.<br />

Tissue Antigens, 2004, 64: 452-461<br />

Königshoff M, Kramer M, Balsara N, Wilhelm J, Amarie OV, Jahn A, Rose F, Fink L, Seeger W, Schaefer L,<br />

Günther A and Eickelberg O<br />

WNT1-inducible signaling protein-1 mediates pulmonary fibrosis in mice and is upregulated in<br />

humans with idiopathic pulmonary fibrosis.<br />

J Clin Invest, 2009, 119,4: 772-787<br />

Kolialexi A, Vrettou C, Traeger-Synodinos J, Burgemeister R, Papantoniou N,<br />

Kanavakis E, Antsaklis A and Mavrou A<br />

Noninvasive prenatal diagnosis of beta-thalassaemia using individual fetal erythroblasts<br />

isolated from maternal blood after enrichment.<br />

Prenat Diagn, 2007, 27,13: 1228-1232<br />

October 2012 35/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Koop K, Eikmans M, Wehland M, Baelde H, Ijpelaar D, Kreutz R, Kawachi H, Kerjaschki D, de Heer E and<br />

Bruijn JA<br />

Selective loss of podoplanin protein expression accompanies proteinuria and precedes<br />

alterations in podocyte morphology in a spontaneous proteinuric rat model.<br />

Am J Pathol, 2008, 173,2: 315-326<br />

Koorstra JB, Habbe N, Mendell JR, Offerhaus GJ, Ryu JK, Feldmann G, Mullendore ME, Goggins MG, Hong<br />

SM and Maitra A<br />

MicroRNA miR-155 is a biomarker of early pancreatic neoplasia.<br />

Cancer Biol Ther, 2009, 8,4: 340-346<br />

Koos B, Bender S, Witt H, Mertsch S, Felsberg J, Beschorner R, Korshunov A, Riesmeier B, Pfister S,<br />

Paulus W and Hasselblatt M<br />

The transcription factor evi-1 is overexpressed, promotes proliferation, and is prognostically<br />

unfavorable in infratentorial ependymomas.<br />

Clin Cancer Res, 2011, 17,11: 3631-3637<br />

Kopecna O, Kubickova S, Cernohorska H, Cabelova K, Vahala J, Rubes J.<br />

Isolation and comparison of tribe-specific centromeric repeats within Bovidae.<br />

J Appl Genet. 2012 Jan 17. [Epub ahead of print] PubMed<br />

Kopper O, Giladi O, Golan-Lev T and Benvenisty N<br />

Characterization of gastrulation-stage progenitor cells and their inhibitory crosstalk in human<br />

embryoid bodies.<br />

Stem Cells, 2010, 28,1: 75-83<br />

Kotter MR, Li WW, Zhao C and Franklin RJM<br />

Myelin impairs CNS remyelination by inhibiting oligodendrocyte precursor cell differentiation.<br />

J Neurosci, 2006, 62,1: 328-332<br />

Krasteva G, Pfeil U, Drab M, Kummer W and Konig P<br />

Caveolin-1 and -2 airway epithelium: expression and in situ association as detected by FRET-<br />

CLSM.<br />

Respirat Res, 2006, 7,1: 108-121<br />

Kraytsberg Y, Bodyak N, Myerow S, Nicholas A, Ebralidze K and Khrapko K<br />

Collection of isolated cells for studying mitochondrial DNA mutations within individual cells.<br />

Methods Mol Biol, 2009, 554: 315-327<br />

Kreft A, Kindler T, Springer E and Kirkpatrick CJ<br />

JAK2-V617F-mutated myeloproliferative neoplasms reveal different allele burden within<br />

hematopoietic cell lineages: a microdissection study of bone marrow trephine biopsies.<br />

Virchows Arch, 2011, 459,5: 521-527<br />

Kreft A, Springer E, Lipka DB and Kirkpatrick CJ<br />

Wild-type JAK2 secondary acute erythroleukemia developing after JAK2-V617F-mutated<br />

primary myelofibrosis.<br />

Acta Haematol, 2009, 122,1: 36-38<br />

Kroneis T, Geigl JB, El-Heliebi A, Auer M, Ulz P, Schwarzbraun T, Dohr G and Sedlmayr P<br />

Combined molecular genetic and cytogenetic analysis from single cells after isothermal wholegenome<br />

amplification.<br />

Clin Chem, 2011, 57,7: 1032-1041<br />

Kroneis T, Gutstein-Abo L, Kofler K, Hartmann M, Hartmann P, Alunni-Fabbroni M, Walcher W, Dohr G,<br />

Petek E, Guetta E and Sedlmayr P<br />

Automatic retrieval of single microchimeric cells and verification of identity by on-chip<br />

multiplex PCR.<br />

J Cell Mol Med, 2010, 14,4: 954-969<br />

Krylov V, Kubickova S, Rubes J, Macha J, Tlapakova T, Seifertova E and Sebkova N<br />

Preparation of Xenopus tropicalis whole chromosome painting probes using laser<br />

microdissection and reconstruction of X. laevis tetraploid karyotype by Zoo-FISH.<br />

Chromosome Res, 2010, 18,4: 431-439<br />

October 2012 36/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kubo N, Akita N, Shimizu A, Kitahara H, Parker AL and Miyagawa S<br />

Identification of oligopeptide binding to colon cancer cells separated from patients using laser<br />

capture microdissection.<br />

J Drug Target, 2008, 16,5: 396-404<br />

Kuester D, El-Rifai W, Peng D, Ruemmele P, Kroeckel I, Peters B, Moskaluk CA, Stolte M, Mönkemüller K,<br />

Meyer F, Schulz HU, Hartmann A, Roessner A and Schneider-Stock R<br />

Silencing of MGMT expression by promoter hypermethylation in the metaplasia-dysplasiacarcinoma<br />

sequence of Barrett's esophagus.<br />

Cancer Lett, 2009, 275,1: 117-126<br />

Kuga D, Mizoguchi M, Guan Y, Hata N, Yoshimoto K, Shono T, Suzuki SO, Kukita Y, Tahira T, Nagata S,<br />

Sasaki T and Hayashi K<br />

Prevalence of copy number neutral LOH in glioblastomas revealed by genome-wide analysis of<br />

laser-microdissected tissues.<br />

Neuro Oncol, 2008, 10,6: 995-1003<br />

Kuhn E, Kurman RJ, Vang R, Sehdev AS, Han G, Soslow R, Wang TL and Shih IM<br />

TP53mutations in serous tubal intraepithelial carcinoma and concurrent pelvic high-grade<br />

serous carcinoma- evidence supporting the clonal relationship of the two lesions.<br />

J Pathol, 2011, in press, doi: 10.1002/path.3023<br />

Kuhn DE, Roy S, Radtke J, Khanna S and Sen CK<br />

Laser microdissection and capture of pure cardiomyocytes and fibroblasts from infarcted heart<br />

regions: perceived hyperoxia induces P21 in peri-infarct myocytes.<br />

Am J Physiol Heart Circ Physiol, 2007, 292,3: H1245-1253<br />

Kuhn DE, Roy S, Radtke J, Gupta S and Sen CK<br />

Laser microdissection and pressure catapulting technique to study gene expression in the<br />

reoxygenated myocardium.<br />

Am J Physiol Heart Circ Physiol, 2006, 290,6: H2625-H2632<br />

Kulla A, Burkhardt K, Meyer-Puttlitz B, Teesalu T, Asser T, Wiestler OD and Becker AJ<br />

Analysis of the TP53 gene in laser-microdissected glioblastoma vasculature.<br />

Acta Neuropathol, 2003, 105: 328-332<br />

Kumamoto K, Kuwabara K, Tajima Y, Amano K, Hatano S, Ohsawa T, Okada N, Ishibashi K, Haga N,<br />

Ishida H.<br />

Thymidylate synthase and thymidine phosphorylase mRNA expression in primary lesions using<br />

laser capture microdissection is useful for prediction of the efficacy of FOLFOX treatment in<br />

colorectal cancer patients with liver metastasis.<br />

Oncol Lett. 2012 May;3(5):983-989. PubMed<br />

Küppers R, Klein U, Schwering I, Distler V, Bräuninger A, Cattoretti G, Tu Y, Stolovitzky GA, Califano A,<br />

Hansmann ML and Dalla-Favera R<br />

Identification of Hodgkin and Reed-Sternberg cell-specific genes by gene expression profiling.<br />

J Clin Invest, 2003, 111,4: 529-537<br />

Kuramochi H, Nakajima G, Kaneko Y, Nakamura A, Inoue Y, Yamamoto M, Hayashi K.<br />

Amphiregulin and Epiregulin mRNA expression in primary colorectal cancer and<br />

corresponding liver metastases.<br />

BMC Cancer. 2012 Mar 13;12:88. PubMed PMID: 22409860. PubMed<br />

Kuramochi H, Hayashi K, Nakajima G, Kamikozuru H, Yamamoto M, Danenberg KD and Danenberg PV<br />

Epidermal growth factor receptor (EGFR) mRNA levels and protein expression levels in<br />

primary colorectal cancer and corresponding liver metastases.<br />

Cancer Chemother Pharmacol, 2010, 65,5: 825-831<br />

Kuramochi H, Hayashi K, Uchida K, Nakajima G, Hatori T, Danenberg KD, Danenberg P and Yamamoto M<br />

High intratumoral dihydropyrimidine dehydrogenase mRNA levels in pancreatic cancer<br />

associated with a high rate of response to S-1.<br />

Cancer Chemother Pharmacol, 2008, 63,1: 85-89<br />

October 2012 37/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kuramochi H, Hayashi K, Uchida K, Miyakura S, Shimizu D, Vallböhmer D, Park S, Danenberg KD,<br />

Takasaki K and Danenberg PV<br />

Vascular endothelial growth factor messenger RNA expression level is preserved in liver<br />

metastases compared with corresponding primary colorectal cancer.<br />

Clin Cancer Res, 2006, 12,1: 29-33<br />

Kuroiwa T, Ishibashi K, Takano H, Higashiyama T, Sasaki N, Nishimura Y and Matsunaga S<br />

Optical isolation of individual mitochondria of Physarum polycephalum for PCR analysis.<br />

Protoplasma, 1996, 194: 275-279<br />

Kutler DI, Wreesmann VB, Goberdhan A, Ben-Porat L, Satagopan J, Ngai I, Huvos AG, Giampietro P,<br />

Levran O, Pujara K, Diotti R, <strong>Carl</strong>son D, Huryn LA, Auerbach AD and Singh B<br />

Human Papillomavirus DNA and p53 polymorphisms in squamous cell carcinomas from Fanconi<br />

anemia patients.<br />

J Natl Cancer Inst, 2003, 95,22: 1718-1721<br />

Kwapiszewska G, Wilhelm J, Wolff S, Laumanns I, Koenig IR, Ziegler A, Seeger W, Bohle RM, Weissmann<br />

N and Fink L<br />

Expression profiling of laser-microdissected intrapulmonary arteries in hypoxia-induced<br />

pulmonary hypertension.<br />

Resp Res, 2005, 6: 109<br />

Kwong R, Lupton MK, Janitz M.<br />

Single-Cell and Regional Gene Expression Analysis in Alzheimer's Disease.<br />

Cell Mol Neurobiol. 2012 Jan 22. [Epub ahead of print] PubMed<br />

Labied S, Blacher S, Carmeliet P, Noël A, Frankenne F, Foidart JM and Munaut C<br />

Transient reduction of placental angiogenesis in PAI-1-deficient mice.<br />

Physiol Genomics, 2011, 43,4: 188-198<br />

Lacerda-Pinheiro S, Dimitrova-Nakov S, Harichane Y, Souyri M, Petit-Cocault L, Legrès L, Marchadier A,<br />

Baudry A, Ribes S, Goldberg M, Kellermann O, Poliard A.<br />

Concomitant multipotent and unipotent dental pulp progenitors and their respective<br />

contribution to mineralised tissue formation.<br />

Eur Cell Mater. 2012 May 24;23:371-86. PubMed<br />

Lachmann K, Eckert S, Vogel A, Klinger A, Gebert A and Klages CP<br />

Development of a multifunctional coating system for laser-induced material transport.<br />

P Org Coat, 2009, 64: 294-299<br />

Lahr G, Starzinski-Powitz A and Mayer A<br />

Analysis of specific gene expression.<br />

Methods Enzymol, 2002, 356: 271-281<br />

Lahr G<br />

RT-PCR from archival single cells is a suitable method to analyse specific gene expression.<br />

Lab Invest, 2000, 80,9: 1477-1479<br />

Lahr G, Stich M, Schütze K, Blümel P, Pösl H and Nathrath WBJ<br />

Diagnosis of papillary thyroid carcinoma is facilitated by using an RT-PCR approach on lasermicrodissected<br />

archival material to detect RET oncogene activation.<br />

Pathobiology, 2000, 68: 218-226<br />

Lajer CB, Garnæs E, Friis-Hansen L, Norrild B, Therkildsen MH, Glud M, Rossing M, Lajer H, Svane D,<br />

Skotte L, Specht L, Buchwald C, Nielsen FC.<br />

The role of miRNAs in human papilloma virus (HPV)-associated cancers: bridging between<br />

HPV-related head and neck cancer and cervical cancer.<br />

Br J Cancer. 2012 Apr 24;106(9):1526-34. PubMed PMID: 22472886. PubMed<br />

Lambie-Anoruo BL, Prince DV, Koukoulas I, Howells DW, Mitchell RJ and van Oorschot RA<br />

Laser microdissection and pressure catapulting with PALM ® to assist typing of target DNA in<br />

dirt samples.<br />

Intern Congr Ser, 2006, 559-561<br />

Langer S, Geigl JB, Gangnus R and Speicher MR<br />

Sequential application of interphase-FISH and CGH to single cells.<br />

Lab Invest, 2005, 85,4: 582-592<br />

October 2012 38/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Langer S, Geigl JB, Ehnle S, Gangnus R, Speicher MR<br />

Live cell catapulting and recultivation does not change the karyotype of HCT116 tumor cells.<br />

Cancer Genet Cytogenet, 2005, 161,2: 174-177<br />

Langeveld D, van Hattem WA, de Leng WW, Morsink FH, ten Kate FJ, Giardiello FM, Offerhaus GJ and<br />

Brosens LA<br />

SMAD4 immunohistochemistry reflects genetic status in juvenile polyposis syndrome.<br />

Clin Cancer Res, 2010, 16,16: 4126-4134<br />

Langheinrich AC, Braun-Dullaeus RC, Walker G, Jeide I, Schilling R, Tammoscheit K, Dreyer T, Fink L,<br />

Bohle RM and Haberbosch W<br />

Effects of 3-deazaadenosine on homocysteine and atherosclerosis in apolipoprotein E-deficient<br />

mice.<br />

Atherosclerosis, 2003, 171: 181-192<br />

Lau CS, Yu CB, Wong HK, Fan DS, Mak HT, Wong KW, Lam DS, Pang CP and Choy KW<br />

Allelic imbalance at 13q31 is associated with reduced GPC6 in Chinese with sporadic<br />

retinoblastoma.<br />

Br J Ophthalmol, 2010, 94,3: 357-363<br />

Laurén HB, Lopez-Picon FR, Brandt AM, Rios-Rojas CJ and Holopainen IE<br />

Transcriptome analysis of the hippocampal CA1 pyramidal cell region after kainic acid-induced<br />

status epilepticus in juvenile rats.<br />

PLoS One, 2010, 5,5: e10733<br />

Lauridsen JB, Johansen JL, Rekling JC, Thirstrup K, Moerk A and Sager TN<br />

Regulation of the Bcas1 and Baiap3 transcripts in the subthalamic nucleus in mice recovering<br />

from MPTP toxicity.<br />

Neurosci Res, 2011, 70,3: 269-276<br />

Lechner S, Müller-Ladner U, Renke B, Schölmerich J, Rüschoff J and Kullmann F<br />

Gene expression pattern of laser microdissected colonic crypts of adenomas with low grade<br />

dysplasia.<br />

Gut, 2003, 52: 1148-1153<br />

Lechner S, Müller-Ladner U, Neumann E, Dietmaier W, Welsh J, Schölmerich J, Rüschoff J and Kullmann F<br />

Use of simplified transcriptors for the analysis of gene expression profiles in lasermicrodissected<br />

cell populations.<br />

Lab Invest, 2001, 81: 1233-1242<br />

Lee JY, Jones C, Zern MA and Revzin A<br />

Analysis of local tissue-specific gene expression in cellular micropatterns.<br />

Anal Chem, 2006, 78,24: 8305-8312<br />

Lee SD, Kim MR, Hwang PG, Shim SS, Yoon BH and Kim CJ<br />

Chorionic plate vessels as an origin of amniotic fluid neutrophils.<br />

Pathol Int, 2004, 54: 516-522<br />

Leedham SJ, Graham TA, Oukrif D, McDonald SA, Rodriguez-Justo M, Harrison RF, Shepherd NA, Novelli<br />

MR, Jankowski JA and Wright NA<br />

Clonality, founder mutations, and field cancerization in human ulcerative colitis-associated<br />

neoplasia.<br />

Gastroenterology, 2009, 136,2: 542-550<br />

Leedham SJ, Preston SL, McDonald SA, Elia G, Bhandari P, Poller D, Harrison R, Novelli MR, Jankowski JA<br />

and Wright NA<br />

Individual crypt genetic heterogeneity and the origin of metaplastic glandular epithelium in<br />

human Barrett's oesophagus.<br />

Gut, 2008, 57,8: 1041-1048.<br />

Lehmann U and Kreipe H<br />

Tissue procurement for molecular studies using laser-assisted microdissection.<br />

Methods Mol Biol, 2009, 506: 299-310<br />

October 2012 39/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Lehmann U, Versmold A and Kreipe H<br />

Combined laser-assisted microdissection and short tandem repeat analysis for detection of in<br />

situ microchimerism after solid organ transplantation.<br />

Methods Mol Biol, 2005, 293: 113-123<br />

Lehmann U, Länger F, Feist H, Glöckner S, Hasemeier B and Kreipe H<br />

Quantitative assessment of promoter hypermethylation during breast cancer development.<br />

Am J Pathol, 2002, 160,2: 605-612<br />

Lehmann U, Hasemeier B, Lilischkis R and Kreipe H<br />

Quanitative analysis of promoter hypermethylation in laser-microdissected archival<br />

specimens.<br />

Lab Invest, 2001, 81,4: 635-637<br />

Lehmann U and Kreipe H<br />

Real-Time PCR analysis of DNA and RNA extracted from formalin-fixed and paraffin-embedded<br />

biopsies.<br />

Methods, 2001, 25,4: 409-418<br />

Lehmann U, Glöckner S, Kleeberger W, Feist H, von Wasielewski R and Kreipe H<br />

Detection of gene amplification in archival breast cancer specimens by laser-assisted<br />

microdissection and quantitative real-time polymerase chain reaction.<br />

Am J Pathol, 2000, 156,6: 1855-1864<br />

Lehmann U, Bock O, Glöckner S and Kreipe H<br />

Quantitative molecular analysis of laser-microdissected paraffin-embedded human tissues.<br />

Pathobiology, 2000, 68: 202-208<br />

Lehmann-Che J, Amira-Bouhidel F, Turpin E, Antoine M, Soliman H, Legres L, Bocquet C, Bernoud R,<br />

Flandre E, Varna M, de Roquancourt A, Plassa LF, Giacchetti S, Espié M, de Bazelaire C, Cahen-Doidy L,<br />

Bourstyn E, Janin A, de Thé H and Bertheau P<br />

Immunohistochemical and molecular analyses of HER2 status in breast cancers are highly<br />

concordant and complementary approaches.<br />

Br J Cancer, 2011, 24; 104,11: 1739-46.<br />

Levkau B, Schäfers M, Wohlschlaeger J, von Wnuck Lipinski K, Keul P, Hermann S, Kawaguchi N,<br />

Kirchhof P, Fabritz L, Stypmann J, Stegger L, Flögel U, Schrader J, Fischer JW, Hsieh P, Ou YL, Mehrhof<br />

F, Tiemann K, Ghanem A, Matus M, Neumann J, Heusch G, Schmid KW, Conway EM and Baba HA<br />

Survivin determines cardiac function by controlling total cardiomyocyte number.<br />

Circulation, 2008, 117,12: 1583-1593.<br />

Levy A, Chang BJ, Abbott LK, Kuo J, Harnett G and Inglis TJJ<br />

Invasion of spores of the arbuscular mycorrhizal fungus Gigaspora decipiens by Burkholderia<br />

spp.<br />

Appl Environ Microbiol, 2003, 69: 6250-6256<br />

Lewis A, Segditsas S, Deheragoda M, Pollard P, Jeffery R, Nye E, Lockstone H, Davis H, Stamp G,<br />

Poulsom R, Wright N and Tomlinson I<br />

Severe polyposis in Apc (1322T) mice is associated with submaximal Wnt signalling and increased<br />

expression of the stem cell marker Lgr5.<br />

Gut, 2010, 59,12: 1680-1686<br />

Li S, Park H, Trempus CS, Gordon D, Liu Y, Cotsarelis G, Morris RJ.<br />

A keratin 15 containing stem cell population from the hair follicle contributes to squamous<br />

papilloma development in the mouse.<br />

Mol Carcinog. 2012 Mar 16. doi: 10.1002/mc.21896. PubMed<br />

Li A, Omura N, Hong SM, Vincent A, Walter K, Griffith M, Borges M and Goggins M<br />

Pancreatic cancers epigenetically silence SIP1 and hypomethylate and overexpress miR-<br />

200a/200b in association with elevated circulating miR-200a and miR-200b levels.<br />

Cancer Res, 2010, 70,13: 5226-5237<br />

Li CX, Han JP, Ren WY, Ji AQ, Xu XL and Hu L<br />

DNA profiling of spermatozoa by laser capture microdissection and low volume-PCR.<br />

PLoS One, 2011, 6,8: e22316<br />

October 2012 40/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Li Q, Rao A, Pereira A, Clarke IJ and Smith JT<br />

Kisspeptin cells in the ovine arcuate nucleus express prolactin receptor but not melatonin<br />

receptor.<br />

J Neuroendocrinol, 2011, 23,10: 871-882<br />

Lin WR, Lim SN, McDonald SA, Graham T, Wright VL, Peplow CL, Humphries A, Kocher HM, Wright NA,<br />

Dhillon AP and Alison MR<br />

The histogenesis of regenerative nodules in human liver cirrhosis.<br />

Hepatology, 2010, 51,3: 1017-1026<br />

Lin J, Takata M, Murata H, Goto Y, Kido K, Ferrone S and Saida T<br />

Polyclonality of BRAF mutations in acquired melanocytic nevi.<br />

J Natl Cancer Inst, 2009, 101,20: 1423-1427<br />

Linde A, Lushington GH, Blecha F and Melgarejo T<br />

Rat cardiomyocytes express a classical epithelial beta-defensin.<br />

Am J Anim Vet Sci, 2008, 3,1: 1-6<br />

Ling G, Persson A, Berne B, Uhlén M, Lundeberg J and Pónten F<br />

Persistent p53 mutations in single cells from normal human skin.<br />

Am J Pathol, 2001, 159,4: 1247-1253<br />

Liu D and Wise GE<br />

Effect of interleukin-10 on gene expression of osteoclastogenic regulatory molecules in the rat<br />

dental follicle.<br />

Eur J Oral Sci, 2006, 114: 42-49<br />

Liu D, Wada I, Tateno H, Ogino D, Suzuki M, Li L, Lu W, Kojiro M, Fukayama M, Okabe H and Fukumoto<br />

M<br />

Allelotypic characteristics of thorotrast-induced intrahepatic cholangiocarcinoma: comparison<br />

to liver cancers not associated with thorotrast.<br />

Radiation Res, 2004, 161: 235-243<br />

Liu L, Drouet V, Wu JW, Witter MP, Small SA, Clelland C, Duff K.<br />

Trans-synaptic spread of tau pathology in vivo.<br />

PLoS One. 2012;7(2):e31302. PubMed<br />

Locke JA, Guns ES, Lehman ML, Ettinger S, Zoubeidi A, Lubik A, Margiotti K, Fazli L, Adomat H, Wasan<br />

KM, Gleave ME and Nelson CC<br />

Arachidonic acid activation of intratumoral steroid synthesis during prostate cancer<br />

progression to castration resistance.<br />

Prostate, 2010, 70,3: 239-251<br />

Lodygin D, Epanchintsev A, Menssen A, Diebold J and Hermeking H<br />

Funtional epigenomics identifies genes frequently silenced in prostate cancer.<br />

Cancer Res, 2005, 65,10: 4218-4227<br />

Lodygin D, Diebold J and Hermeking H<br />

Prostate cancer is characterized by epigenetic silencing of 14-3-3� expression.<br />

Oncogene, 2004, 23,56: 9034-9041<br />

Londhe KB, Borlak J.<br />

A Cross-Platform Comparison of Genome-Wide Expression Changes of Laser Microdissected<br />

Lung Tissue of C-Raf Transgenic Mice Using 3'IVT and Exon Array.<br />

PLoS One. 2012;7(7):e40778. PubMed<br />

Lorkowski S and Cullen P (eds)<br />

Analysing Gene Expression.<br />

Willey-VCH Verlag, Weinheim, 2003, Chapter 2.2.6, 120-132, ISBN 3-527-30488-6<br />

Louzada S, Paço A, Kubickova S, Adega F, Guedes-Pinto H, Rubes J and Chaves R<br />

Different evolutionary trails in the related genomes Cricetus cricetus and Peromyscus<br />

eremicus (Rodentia, Cricetidae) uncovered by orthologous satellite DNA repositioning.<br />

Micron, 2008, 39,8: 1149-1155<br />

October 2012 41/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Lu J, Kwan BCH, Lai FMM, Choi PCL, Tam LS, Li EKM, Chow KM, Wang G, Li PKT, Szeto CC<br />

The gene expression of NGAL and TLR9 in glomerulus and tubule-interstitium of patients with<br />

lupus nephritis.<br />

Adv Biosci Biotech, 2011, 2:33-39<br />

Lu J, Kwan BC, Lai FM, Tam LS, Li EK, Chow KM, Wang G, Li PK, Szeto CC.<br />

Glomerular and Tubulointerstitial miR-638, miR-198 and miR-146a Expression in<br />

Lupus Nephritis.<br />

Nephrology (<strong>Carl</strong>ton). 2012 Feb 1. doi: 10.1111/j.1440-1797.2012.01573.x. PubMed<br />

Lu J, Kwan BC, Lai FM, Choi PC, Tam LS, Li EK, Chow KM, Wang G, Li PK and Szeto CC<br />

Gene expression of TWEAK/Fn14 and IP-10/CXCR3 in glomerulus and tubulointerstitium of<br />

patients with lupus nephritis.<br />

Nephrology (<strong>Carl</strong>ton), 2011, 16,4: 426-432<br />

Lu JX and Szeto CC<br />

Gene expression using the PALM system.<br />

Methods Mol Biol, 2011, 755: 47-56<br />

Lu Y, Malmhäll C, Sjöstrand M, Rådinger M, O'Neil SE, Lötvall J and Bossios A<br />

Expansion of CD4CD25 and CD25 T-bet, GATA-3, Foxp3 and RORγt cells in allergic<br />

inflammation, local lung distribution and chemokine gene expression.<br />

PLoS One, 2011, 6,5: in press<br />

Ludes B, Keyser C<br />

Avoiding errors and pitfalls in evidence sampling for forensic genetics.<br />

Forensic Medicine – From old problems to new challenge, 2012, ISBN: 978-307-262-3, 1-12, Prof. Duarte<br />

Nuno Vieira (Ed.), InTech, Available from: http://www.intechopen.com/books/forensic-medicine-fromold-problems-to-new-challenges/avoiding-errors-and-pitfalls-in-evidence-sampling-for-forensic-genetics<br />

Luebke AM, Schlomm T, Gunawan B, Bonkhoff H, Füzesi L and Erbersdobler A<br />

Simultaneous tumour-like, atypical basal cell hyperplasia and acinar adenocarcinoma of the<br />

prostate: a comparative morphological and genetic approach.<br />

Virchows Archiv, 2005, 446,3: 338-341<br />

Lukas C, Melander F, Stucki M, Falck J, Bekker-Jensen S, Goldberg M, Lerenthal Y, Jackson SP, Bartek J<br />

and Lukas J<br />

Mdc1 couples DNA double-strand break recognition by Nbs1 with its H2AX-dependent<br />

chromatin retention.<br />

EMBO J, 2004, supplement inf 1, 23: 2674-2683<br />

Lukas C, Falck J, Bartkova J, Bartek J and Lukas J<br />

Distinct spatiotemporal dynamics of mammalian checkpoint regulators induced by DNA<br />

damage.<br />

Nat Cell Biol, 2003, 5,3: 255-260<br />

Lurquin C, Lethé B, De Plaen E, Corbière V, Théate I, van Baren N, Coulie PG and Boon T<br />

Contrasting freyuencies of antitumor and anti-vaccine T cells in metastases of a melanoma<br />

patient vaccinated with a MAGE tumor antigen.<br />

JEM, 2005, 201,2: 249-257<br />

Ma L, Teruya-Feldstein J, Behrendt N, Chen Z, Noda T, Hino O, Cordon-Cardo C and Pandolfi PP<br />

Genetic analysis of Pten and Tsc2 functional interactions in the mouse reveals asymmetrical<br />

haploinsufficiency in tumor suppression.<br />

Genes & Dev, 2005, 19: 1779-1786<br />

Machida Y, Ueda Y, Shimasaki M, Sato K, Sagawa M, Katsuda S and Sakuma T<br />

Relationship of aquaporin 1, 3, and 5 expression in lung cancer cells to cellular differentiation,<br />

invasive growth, and metastasis potential.<br />

Hum Pathol, 2011, in press<br />

Maes AHJ<br />

Columnar cell lesions of the breast: Clinical significance and molecular background.<br />

Thesis, 2012<br />

October 2012 42/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Maglennon GA, McIntosh P and Doorbar J<br />

Persistence of viral DNA in the epithelial basal layer suggests a model for papillomavirus<br />

latency following immune regression.<br />

Virology, 2011, 414,2: 153-163<br />

Maitre M, Roullot-Lacarrière V, Piazza PV and Revest JM<br />

Western blot detection of brain phosphoproteins after performing Laser Microdissection and<br />

Pressure Catapulting (LMPC).<br />

J Neurosci Methods, 2011, 198,2: 204-212<br />

Makino H, Uetake H, Danenberg K, Danenberg PV and Sugihara K<br />

Efficacy of laser capture microdissection plus RT-PCR technique in analyzing gene expression<br />

levels in human gastric cancer and colon cancer.<br />

BMC Cancer, 2008, 26,8: 210<br />

Malapelle U, de Rosa N, Rocco D, Bellevicine C, Crispino C, Illiano A, Piantedosi F, Nappi O, Troncone G<br />

EGFR and KRAS mutations detection on lung cancer liquid-based cytology: a pilot study.<br />

J Clin Pathol, 2012, 65,1: 87-91<br />

Malik IA, Moriconi F, Sheikh N, Naz N, Khan S, Dudas J, Mansuroglu T, Hess CF, Rave-Fränk M,<br />

Christiansen H and Ramadori G<br />

Single-dose gamma-irradiation induces up-regulation of chemokine gene expression and<br />

recruitment of granulocytes into the portal area but not into other regions of rat hepatic<br />

tissue.<br />

Am J Pathol, 2010, 176,4: 1801-1815<br />

Malusecka E, Fiszer-Kierzkowska A, Herik R, Wronski S, Rembak-Szynkiewicz J.<br />

Combining Laser-Assisted Microdissection with/and Immunohistochemistry –<br />

RNA Quality of Clinical LCM-Derived Samples.<br />

J Clinic Experiment Pathol. 2012, in press, doi: 10.4172/2161-0681.1000112<br />

Mantzaris D, Cram D, Healy C, Howlett D and Kovacs G<br />

Preliminary report: Correct diagnosis of sex in fetal cells isolated from cervical mucus during<br />

early pregnancy.<br />

Aust N Z J Obstet Gynaecol, 2005, 45,6: 529-532<br />

van der Marel J, Quint WG, Schiffman M, van de Sandt MM, Zuna RE, Terence Dunn S, Smith K, Mathews<br />

CA, Gold MA, Walker J, Wentzensen N.<br />

Molecular mapping of high-grade cervical intraepithelial neoplasia shows etiological<br />

dominance of HPV16.<br />

Int J Cancer. 2012 Mar 15. doi: 10.1002/ijc.27532. PubMed<br />

Marotta D, Karar J, Jenkins WT, Kumanova M, Jenkins KW, Tobias JW, Baldwin D, Hatzigeorgiou A,<br />

Alexiou P, Evans SM, Alarcon R, Maity A, Koch C and Koumenis C<br />

In vivo profiling of hypoxic gene expression in gliomas using the hypoxia marker EF5 and<br />

laser-capture microdissection.<br />

Cancer Res, 2011, 71,3: 779-789<br />

Marsboom G, Wietholt C, Haney CR, Toth PT, Ryan JJ, Morrow E, Thenappan T, Bache-Wiig P, Piao L, Paul<br />

J, Chen CT, Archer SL.<br />

Lung 18F-Fluorodeoxyglucose Positron Emission Tomography for Diagnosis and Monitoring of<br />

Pulmonary Arterial Hypertension.<br />

Am J Respir Crit Care Med. 2012 Mar 15;185(6):670-9. PubMed<br />

Martel A, Adriaensen C, Sharifian-Fard M, Vandewoestyne M, Deforce D, Favoreel, Bergen, Spitzen-van<br />

der Sluijs, Devisscher S, Adriaens T, Louette G, Baert K, Hyatt A, Crameri S, Haesebrough F, Pasmans F.<br />

The novel ‘Candidatus Amphibiichlamydia ranarum’ is highly prevalent in invasive exotic<br />

bullfrogs (Lithobates catesbeianus).<br />

Environmental Microbiology Reports (2012) doi:10.1111/j.1758-2229.2012.00359.xemi4<br />

Martorell M, Gil-Salom M, Pérez-Vallés A, Garcia JA, Rausell N and Senpere A<br />

Presence of Human Papillomavirus DNA in testicular biopsies from nonobstructive<br />

azoospermic men.<br />

Arch Pathol Lab Med, 2005, 129,9: 1132-1136<br />

October 2012 43/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Marx AH, Zielinski M, Kowitz CM, Dancau AM, Thieltges S, Simon R, Choschzick M, Yekebas E, Kaifi JT,<br />

Mirlacher M, Atanackovic D, Brümmendorf TH, Fiedler W, Bokemeyer C, Izbicki JR and Sauter G<br />

Homogeneous EGFR amplification defines a subset of aggressive Barrett's adenocarcinomas<br />

with poor prognosis.<br />

Histopathology, 2010, 57,3: 418-426<br />

Massi D, Sardi I, Urso C, Franchi A, Borgognoni L, Salvadori A, Giannini A, Reali UM and Santucci M<br />

Microsatellite analysis in cutaneous malignant melanoma.<br />

Melanoma Res, 2002, 12: 577-584<br />

Massuti B, Cobo M, Camps C, Dómine M, Provencio M, Alberola V, Viñolas N, Rosell R, Tarón M,<br />

Gutiérrez-Calderón V, Lardelli P, Alfaro V, Nieto A, Isla D.<br />

Trabectedin in patients with advanced non-small-cell lung cancer (NSCLC) with XPG<br />

and/or ERCC1 overexpression and BRCA1 underexpression and pretreated with platinum.<br />

Lung Cancer. 2012 Jun;76(3):354-61. PubMed<br />

Matalova E, Dubska L, Fleischmannova J, Chlastakova I, Janeckova E and Tucker AS<br />

Cell proliferation and apoptosis in the primary enamel knot measured by flow cytometry of<br />

laser microdissected samples.<br />

Arch Oral Biol, 2010, 55,8: 570-575<br />

Matas AJ, Yeats TH, Buda GJ, Zheng Y, Chatterjee S, Tohge T, Ponnala L, Adato A, Aharoni A, Stark R,<br />

Fernie AR, Fei Z, Giovannoni JJ and Rose JK<br />

Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides<br />

insights into metabolic and regulatory specialization and cuticle formation.<br />

Plant Cell, 2011, in press<br />

Mathar I, Vennekens R, Meissner M, Kees F, van der Mieren G, Camacho Londoño JE, Uhl S, Voets T,<br />

Hummel B, van den Bergh A, Herijgers P, Nilius B, Flockerzi V, Schweda F and Freichel M<br />

Increased catecholamine secretion contributes to hypertension in TRPM4-deficient mice.<br />

J Clin Invest, 2010, 120,9: 3267-3279<br />

Mathiesen RR, Fjelldal R, Liestøl K, Due EU, Geigl JB, Riethdorf S, Borgen E, Rye IH, Schneider IJ,<br />

Obenauf AC, Mauermann O, Nilsen G, Christian Lingjaerde O, Børresen-Dale AL, Pantel K, Speicher MR,<br />

Naume B, Baumbusch LO.<br />

High-resolution analyses of copy number changes in disseminated tumor cells of patients with<br />

breast cancer.<br />

Int J Cancer. 2011 Sep 20. doi: 10.1002/ijc.26444. PubMed<br />

Matsubayashi H, Sato N, Brune K, Blackford AL, Hruban RH, Canto M, Yeo CJ and Goggins M<br />

Age- and disease-related methylation of multiple genes in nonneoplastic duodenum and in<br />

duodenal juice.<br />

Clin Cancer Res, 2005, 11: 573-583<br />

Matsumura H, Yoshida K, Luo S, Kimura E, Fujibe T, Albertyn Z, Barrero RA, Krüger DH, Kahl G, Schroth<br />

GP and Terauchi R<br />

High-throughput SuperSAGE for digital gene expression analysis of multiple samples using<br />

next generation sequencing.<br />

PLoS One, 2010, e12010<br />

Matsunaga T, Yamamoto G and Tachikawa T<br />

Expression of typical calpains in mouse molar.<br />

Arch Oral Biol, 2009, 54,10: 885-892<br />

Matsunaga S, Schütze K, Donnison IS, Grant SR, Kuroiwa T and Kawano S<br />

Single pollen typing combined with lasermediated manipulation.<br />

Plant Journal, 1999, 20,3: 371-378<br />

Matsunaga S, Kawano S, Michimoto T, Higashiyama T, Nakao S, Sakai A and Kuroiwa T<br />

Semi-automatic laser beam microdissection of the Y chromosome and analysis of Y<br />

chromosome DNA in a dioecious plant, Silene latifolia.<br />

Plant Cell Physiol, 1999, 40,1: 60-68<br />

October 2012 44/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Matthaei H, Norris AL, Tsiatis AC, Olino K, Hong SM, dal Molin M, Goggins MG, Canto M, Horton KM,<br />

Jackson KD, Capelli P, Zamboni G, Bortesi L, Furukawa T, Egawa S, Ishida M, Ottomo S, Unno M, Motoi F,<br />

Wolfgang CL, Edil BH, Cameron JL, Eshleman JR, Schulick RD, Maitra A, Hruban RH.<br />

Clinicopathological characteristics and molecular analyses of multifocal intraductal papillary<br />

mucinous neoplasms of the pancreas.<br />

Ann Surg. 2012 Feb;255(2):326-33. PubMed<br />

Matzkin ME, Mayerhofer A, Rossi SP, Gonzalez B, Gonzalez CR, Gonzalez-Calvar SI, Terradas C, Ponzio R,<br />

Puigdomenech E, Levalle O, Calandra RS and Frungieri MB<br />

Cyclooxygenase-2 in testes of infertile men: evidence for the induction of prostaglandin<br />

synthesis by interleukin-1ß.<br />

Fertil Steril, 2010, 94,5: 1933-1936<br />

Mawrin C, Kirches E, Krause G, Wiedemann FR, Vorwerk CK, Bogerts B, Schildhaus HU, Dietzmann K and<br />

Schneider-Stock R<br />

Single-cell analysis of mtDNA deletion levels in sporadic amyotrophic lateral sclerosis.<br />

Neuroreport, 2004, 15,6: 939-943<br />

Mawrin C, Kirches E and Dietzmann K<br />

Single-Cell analysis of mtDNA in amyotrophic lateral sclerosis: Towards the characterization of<br />

individual neurons in neurodegenerative disorders.<br />

Pathol Res Pract, 2003, 199: 415-418<br />

Maxwell GL, Hood BL, Day R, Chandran U, Kirchner D, Kolli VS, Bateman NW, Allard J, Miller C, Sun M,<br />

Flint MS, Zahn C, Oliver J, Banerjee S, Litzi T, Parwani A, Sandburg G, Rose S, Becich MJ, Berchuck A,<br />

Kohn E, Risinger JI and Conrads TP<br />

Proteomic analysis of stage I endometrial cancer tissue: Identification of proteins associated<br />

with oxidative processes and inflammation.<br />

Gynecol Oncol, 2011, 121,3: 586-594<br />

McDonald SA, Greaves LC, Gutierrez-Gonzalez L, Rodriguez-Justo M, Deheragoda M, Leedham SJ, Taylor<br />

RW, Lee CY, Preston SL, Lovell M, Hunt T, Elia G, Oukrif D, Harrison R, Novelli MR, Mitchell I, Stoker DL,<br />

Turnbull DM, Jankowski JA and Wright NA<br />

Mechanisms of field cancerization in the human stomach: the expansion and spread of<br />

mutated gastric stem cells.<br />

Gastroenterology, 2008, 134,2: 500-510<br />

McGrice HA<br />

Molecular characterisation of primary wool follicle initiation in merino sheep.<br />

Thesis, 2009<br />

McLennan R, Dyson L, Prather KW, Morrison JA, Baker RE, Maini PK, Kulesa PM.<br />

Multiscale mechanisms of cell migration during development: theory and experiment.<br />

Development. 2012 Aug;139(16):2935-44. PubMed<br />

McNally LR, Henk WG, Cooper RK<br />

Laser pressure catapulting followed by B actin gene identification in Japanese quail<br />

macrochromosomes and microchrosomosomes using Teflon-coated coverslip slides.<br />

J Microsc, 2005, 218: 219-224<br />

Meimberg M, Thalhammer S, Brachmann A, Müller B, Eichacker LA, Heckl WM and Heubl G<br />

Selection of chloroplasts by laser MicroBeam microdissection for single-chloroplast PCR.<br />

BioTechniques, 2003, 34,6: 1238-1243<br />

Meissner M, Weissgerber P, Londoño JE, Prenen J, Link S, Ruppenthal S, Molkentin JD, Lipp P, Nilius B,<br />

Freichel M and Flockerzi V<br />

Moderate calcium channel dysfunction in adult mice with inducible cardiomyocyte-specific<br />

excision of the cacnb2 gene.<br />

J Biol Chem, 2011, 286,18: 15875-15882<br />

Mengel M, Jonigk D, Wilkens L, Rademacher J, von Wasielewski R, Lehmann U, Haller H, Mihatsch M and<br />

Kreipe H<br />

Chimerism of metanephric adenoma but not of carcinoma in kidney transplants.<br />

Am J Pathol, 2004, 165,6: 2079-2085<br />

October 2012 45/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Mengel M, Jonigk D, Marwedel M, Kleeberger W, Bredt M, Bock O, Lehmann U, Gwinner W, Haller H and<br />

Kreipe H<br />

Tubular chimerism occurs regularly in renal allografts and is not correlated to outcome.<br />

J Am Soc Nephrol, 2004, 15: 978-986<br />

Merkelbach-Bruse S, Wardelmann E, Behrens P, Losen I, Buettner R and Friedrichs N<br />

Current diagnostic methods of HER-2/neu detection in breast cancer with special regard to<br />

real-time PCR.<br />

Am J Surg Pathol, 2003, 27,12: 1565-1570<br />

Méry A, Aimond F, Ménard C, Mikoshiba K, Michalak M and Pucéat M<br />

Initiation of embryonic cardiac pacemaker activity by inositol 1,4,5-triphosphate-dependent<br />

calcium signaling.<br />

Mol Biol Cell, 2005, 16: 2414-2423<br />

Mestdagh P, Feys T, Bernard N, Guenther S, Chen C, Speleman F, Vandesompele J<br />

High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of<br />

input RNA.<br />

Nucleic Acids Res, 2008, 36,21: e143<br />

Micke P, Bjornsen T, Scheidl S, Strömberg S, Demoulin JB, Ponten F, Östman A, Lindahl P and Busch C<br />

A fluid cover medium provides superior morphology and preserves RNA integrity in tissue<br />

sections for laser microdissection and pressure catapulting.<br />

J Pathol, 2004, 202: 130-138<br />

Mietens A, Tasch S, Feuerstacke C, Eichner G, Volkmann J, Schermuly RT, Grimminger F, Müller D and<br />

Middendorff R<br />

Phosphodiesterase 5 (PDE5) inhibition, ANP and NO rapidly reduce epididymal duct<br />

contractions, but long-term PDE5 inhibition in vivo does not.<br />

Mol Cell Endocrinol, 2012, 349,2: 145-153<br />

Milićević NM, Klaperski K, Nohroudi K, Milićević Ž, Bieber K, Baraniec B, Blessenohl M, Kalies K, Ware CF<br />

and Westermann J<br />

TNF receptor-1 is required for the formation of splenic compartments during adult, but not<br />

embryonic life.<br />

J Immunol, 2011, 186,3: 1486-1494<br />

Miller-Delaney SF, Das S, Sano T, Jimenez-Mateos EM, Bryan K, Buckley PG, Stallings RL, Henshall DC.<br />

Differential DNA methylation patterns define status epilepticus and epileptic tolerance.<br />

J Neurosci. 2012 Feb 1;32(5):1577-88. PubMed PMID: 22302800. PubMed<br />

Mitterbauer C, Schwarz C, Hauser P, Steininger R, Regele HM, Rosenkranz A and Oberbauer R<br />

Impaired tubulointerstitial expression of endothelin-1 and nitric oxide isoforms in donor<br />

kidney biopsies with postischemic acute renal failure.<br />

Transplantation, 2003, 76,4: 715-720<br />

Miyake K, Imura S, Yoshizumi T, Ikemoto T, Morine Y and Shimada M<br />

Role of thymidine phosphorylase and orotate phosphoribosyltransferase mRNA expression and<br />

its ratio to dihydropyrimidine dehydrogenase in the prognosis and clinicopathological features<br />

of patients with pancreatic cancer.<br />

Int J Clin Oncol, 2007, 12,2: 111-119<br />

Miyazaki T, Hara M, Ichiki A, Yamamoto Y, Takada A, Kido A, Nodera M, Yanagisawa H, Suzuki H and<br />

Saito K<br />

An efficient novel method for analyzing STR loci from a single sperm captured by laser<br />

microdissection.<br />

Forensic Sci Int Genetics Suppl, 2008, 437-438<br />

Mizutani G, Nakanishi Y, Watanabe N, Honma T, Obana Y, Seki T, Ohni S, Nemoto N.<br />

Expression of Somatostatin Receptor (SSTR) Subtypes (SSTR-1, 2A, 3, 4 and 5) in<br />

Neuroendocrine Tumors Using Real-time RT-PCR Method and Immunohistochemistry.<br />

Acta Histochem Cytochem. 2012 Jun 28;45(3):167-76. PubMed<br />

October 2012 46/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Mølbak L, Klitgaard K, Jensen TK, Fossi M and Boye M<br />

16S rRNA gene identification of a novel invasive not-yet cultivated Treponema sp. in the large<br />

intestine of pigs.<br />

J Clin Microbiol, 2006, 44,12: 4537-4540<br />

Mori R, Wang Q, Danenberg KD, Pinski JK and Danenberg PV<br />

Both ß-actin and GAPDH are useful reference genes for normalization of quantitative RT-PCR<br />

in human FFPE tissue samples of prostate cancer.<br />

Prostate, 2008, 68,14: 1555-1560<br />

Morimatsu K, Aishima S, Kayashima T, Hayashi A, Nakata K, Oda Y, Taguchi T, Tsuneyoshi M, Tanaka M,<br />

Oda Y.<br />

Liver-intestine cadherin expression is associated with intestinal differentiation and<br />

carcinogenesis in intraductal papillary mucinous neoplasm.<br />

Pathobiology. 2012;79(2):107-14. PubMed<br />

Morine Y, Shimada M, Utsunomiya T, Imura S, Ikemoto T, Hanaka J, Kanamoto M, Kurita N, Miyake H.<br />

Role of thymidylate synthase and dihydropyrimidine dehydrogenase mRNA in intrahepatic<br />

cholangiocarcinoma.<br />

Surg Today. 2012 Jan;42(2):135-40. PubMed<br />

Morrogh M, Andrade VP, Giri D, Sakr RA, Paik W, Qin LX, Arroyo CD, Brogi E, Morrow M and King TA<br />

Cadherin-catenin complex dissociation in lobular neoplasia of the breast.<br />

Breast Cancer Res Treat, 2011, in press<br />

Morse AM, Carballo V, Baldwin DA, Taylor CG and McIntyre LM<br />

Comparison between NuGEN's WT-Ovation pico and one-direct amplification systems.<br />

J Biomol Tech, 2010, 21,3: 141-147<br />

Morton JP, Jamieson NB, Karim SA, Athineos D, Ridgway RA, Nixon C, McKay CJ, Carter R, Brunton VG,<br />

Frame MC, Ashworth A, Oien KA, Evans TR and Sansom OJ<br />

Lkb1 haploinsufficiency cooperates with Kras to promote pancreatic cancer via suppression of<br />

p21 dependent growth arrest.<br />

Gastroenterology, 2010, 139,2: 586-597<br />

Mottok A, Hansmann ML and Bräuninger A<br />

Activation induced cytidine deaminase expression in lymphocyte predominant Hodgin<br />

lymphoma.<br />

J Clin Pathol, 2005, 58: 1002-1004<br />

Muller IB<br />

DNA methylation: an important mechanism in colorectal carcinogenesis and pretumor<br />

progression.<br />

Thesis, 2011, 1-28<br />

Müller C, Siemer D, Lehnerdt G, Lang S and Küppers R<br />

Molecular analysis of IgD-positive human germinal centres.<br />

Int Immunol, 2010, 22,4: 289-298<br />

Murray C, McAlister C and Elliott K<br />

Identification and isolation of male cells using fluorescence in situ hybridisation and laser<br />

microdissection, for use in the investigation of sexual assault.<br />

Forensic Sci Int Genet, 2007, 1,3-4: 247-252<br />

Murry BP, Greiter-Wilke A, Paulsen DB, Hiatt KM, Beltrami CA and Marchetti D<br />

Selective heparanase localization in malignant melanoma.<br />

Int J Oncol, 2005, 26: 345-352<br />

Musilova P, Kubickova S, Zrnova E, Horin P, Vahala J and Rubes J<br />

Karyotypic relationships among Equus grevyi, Equus burchelli and domestic horse defined<br />

using horse chromosome arm-specific probes.<br />

Chromosome Res, 2007, 15,6: 807-813<br />

October 2012 47/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Mustafa T, Eckert A, Klonisch T, Kehlen A, Maurer P, Klintschar M, Erhuma M, Zschoyan R, Gimm O,<br />

Dralle H, Schubert J and Hoang-Vu C<br />

Expression of the epidermal growth factor seven-transmembrane member CD97 correlates<br />

with grading and staging in human oral squamous cell carcinomas.<br />

Cancer Epidemiol Biomarkers Prev, 2005, 14,1: 108-119<br />

Mustafa T, Klonisch T, Hombach-Klonisch S, Kehlen A, Schmutzler C, Koehrle J, Gimm O, Dralle H and<br />

Hoang-Vu C<br />

Expression of CD97 and CD55 in human medullary thyroid carcinomas.<br />

Int J Oncol, 2004, 24,2: 285-294<br />

Nafe R, Glienke W, Burgemeister R, Gangnus R, Haar B, Pries A and Schlote W<br />

Regional heterogeneity of EGFR-gene-amplification and nuclear morphology in glioblastomas –<br />

An investigation using Laser Microdissection and Pressure Catapulting (LMPC).<br />

Anal Quant Cytol Histol, 2004, 26,2: 65-76<br />

Nafe R, Gangnus R, Glienke W, Burgemeister R, Haar B, Pries A and Schlote W<br />

Laser Microdissection and Pressure Catapulting (LMPC) in paraffin sections mounted on glass<br />

slides. A methodological report.<br />

Pathol Res Pract, 2003, 199: 411-414<br />

Nagasawa Y, Takenaka M, Matsuoka Y, Imai E and Hori M<br />

Quantitation of mRNA expression in glomeruli using laser-manipulated microdissection and<br />

laser pressure catapulting.<br />

Kidney Int, 2000, 57: 717-723<br />

Naidu SK<br />

Pathology of three transgenic mouse lines with unique pten mutant alleles.<br />

Thesis, 2010<br />

Nakagawa T, Shimada M, Kurita N, Iwata T, Nishioka M, Yoshikawa K, Higashijima J, Utsunomiya T.<br />

Thymidylate synthase (TS) protein expression as a prognostic factor in advanced colorectal<br />

cancer: a comparison with TS mRNA expression.<br />

Hepatogastroenterology. 2012 Jun;59(116):1059-62. doi: 10.5754/hge09243. PubMed<br />

Nakahara O, Takamori H, Iwatsuki M, Baba Y, Sakamoto Y, Tanaka H, Chikamoto A, Horino K, Beppu T,<br />

Kanemitsu K, Honda Y, Iyama KI and Baba H<br />

Carcinogenesis of intraductal papillary mucinous neoplasm of the pancreas: loss of microRNA-<br />

101 promotes overexpression of histone methyltransferase EZH2.<br />

Ann Surg Oncol, 2011, in press<br />

Nakashima J, Chen F, Jackson L, Shadle G and Dixon RA<br />

Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa): effects<br />

on lignin composition in specific cell types.<br />

New Phytol, 2008, 179,3: 738-750<br />

Nakatani K, Fujii H, Hasegawa H, Terada M, Arita N, Ito MR, Ono M, Takahashi S, Saiga K, Yoshimoto S,<br />

Iwano M, Shiiki H, Saito Y and Nose M<br />

Endothelial adhesion molecules in glomerular lesions: Association with their severity and<br />

diversity in lupus models.<br />

Kidney Int, 2004, 65,4: 1290-1300<br />

Nakata K, Ohuchida K, Mizumoto K, Kayashima T, Ikenaga N, Sakai H, Lin C, Fujita H, Otsuka T, Aishima<br />

S, Nagai E, Oda Y and Tanaka M<br />

MicroRNA-10b is overexpressed in pancreatic cancer, promotes its invasiveness, and<br />

correlates with a poor prognosis.<br />

Surgery, 2011, 150,5: 916-922<br />

Nandigama R, Bonitz M, Papadakis T, Schwantes U, Thomas B and Kummer W<br />

Muscarinic acetylcholine receptor subtypes expressed by mouse bladder afferent neurons.<br />

Neuroscience, 2010, 168,3: 842-850<br />

Naoe M, Ogawa Y, Morita J, Shichijo T, Fuji K, Takeshita K, Kushima M, Terao S, Yamochi T and Ota H<br />

Expression of the fluoropyrimidine-metabolizing enzymes in bladder cancers as measured by<br />

the Danenberg tumor profile.<br />

Oncol Res, 2009, 18,4: 153-162<br />

October 2012 48/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Narumi S, Yoshida A, Muroya K, Asakura Y, Adachi M, Fukuzawa R, Kameyama K and Hasegawa T<br />

PAX8 mutation disturbing thyroid follicular growth: a case report.<br />

J Clin Endocrinol Metab, 2011, 96,12: E2039-44<br />

Nawaratna SS, McManus DP, Moertel L, Gobert GN and Jones MK<br />

Gene atlasing of digestive and reproductive tissues in Schistosoma mansoni.<br />

PLoS Negl Trop Dis, 2011, in press<br />

Nerlich AG, Sauer U, Ruoss I and Hagedorn HG<br />

High frequency of TGF-ß-receptor-II mutations in microdissected tissue samples from<br />

laryngeal squamous cell carcinomas.<br />

Lab Invest, 2003, 83,8: 1241-1251<br />

Niyaz Y, Stich M, Sägmüller B, Burgemeister R, Friedemann G, Sauer U, Gangnus R and Schütze K<br />

Noncontact Laser Microdissection and Pressure Catapulting: Sample preparation for genomic,<br />

transcriptomic and proteomic analysis.<br />

Microarrays in Clinical Diagnostics in Methods in Molecular Medicine, 2005, 114: 1-24 (ed. Joos T and<br />

Fortina P)<br />

Niyaz Y and Schütze K<br />

Noncontact Laser Microdissection and Pressure Catapulting: A basic tool in genomics,<br />

transcriptomics and proteomics.<br />

Handbook of Immunohistochemistry and In Situ Hybridization of Human Carcinomas, 2005, 3: 55-63 (ed.<br />

Hayat M)<br />

Niyaz Y and Lahr G<br />

Non-contact Laser Microdissection and Catapulting.<br />

Business briefings, Future Drug Discovery, 2004: 93-98<br />

Noack F, Escribano L, Sotlar K, Nunez R, Schütze K, Valent P and Horny HP<br />

Evolution of urticaria pigmentosa into indolent systemic mastocytosis: Abnormal immunophenotype<br />

of mast cells without evidence of c-kit mutation ASP-816-VAL.<br />

Leukemia & Lymphoma, 2003, 44: 313-319<br />

Noack F, Helmecke D, Rosenberg R, Thorban S, Nekarda H, Fink U, Lewald J, Schütze K, Stich M,<br />

Harbeck N, Magdolen V, Graeff H and Schmitt M<br />

CD87-positive tumor cells in bone marrow aspirates identified by confocal laser scanning<br />

fluorescence microscopy.<br />

Int J Oncol, 1999, 15: 617-623<br />

Nogueira FT, Chitwood DH, Madi S, Ohtsu K, Schnable PS, Scanlon MJ and Timmermans MC<br />

Regulation of small RNA accumulation in the maize shoot apex.<br />

PLoS Genet, 2009, 5,1: e1000320<br />

Noreikat K, Wolff M, Kummer W, Kölle S.<br />

Ciliary Activity in the Oviduct of Cycling, Pregnant and Muscarinic Receptor Knockout Mice.<br />

Biol Reprod. 2012 Feb 1. PubMed<br />

Novotný J and Hadrys T<br />

Bringing laser microdissection and on-chip PCR together.<br />

Promega, 2008, profiles in DNA: 9-11<br />

Obenauf AC, Schwarzbraun T, Auer M, Hoffmann EM, Waldispuehl-Geigl J, Ulz P, Günther B, Duba HC,<br />

Speicher MR and Geigl JB<br />

Mapping of balanced chromosome translocation breakpoints to the basepair level from<br />

microdissected chromosomes.<br />

J Cell Mol Med, 2010, 14,8: 2078-2084<br />

Obermann EC, Mueller N, Rufle A, Menter T, Mueller-Garamvoelgyi E, Cathomas G, Dirnhofer S and<br />

Tzankov A<br />

Clonal relationship of classical hodgkin lymphoma and its recurrences.<br />

Clin Cancer Res, 2011, 17,16: 5268-5274<br />

October 2012 49/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Obermann EC, Junker K, Stoehr R, Dietmaier W, Zaak D, Schubert J, Hofstaedter F, Knuechel R and<br />

Hartmann A<br />

Frequent genetic alterations in flat urothelial hyperplasias and concomitant papillary bladder<br />

cancer as detected by CGH, LOH, and FISH analyses.<br />

J Pathol, 2003, 199: 50-57<br />

Oeschger FM, Wang WZ, Lee S, García-Moreno F, Goffinet AM, Arbonés ML, Rakic S and Molnár Z<br />

Gene Expression Analysis of the Embryonic Subplate.<br />

Cereb Cortex, 2011, in press<br />

Östreicher I, Almeida JR, Campean V, Rauh M, Plank C, Amann K and Dötsch J<br />

Changes in 11ß-hydroxysteroid dehydrogenase type 2 expression in a low-protein rat model of<br />

intrauterine growth restriction.<br />

Nephrol Dial Transplant, 2010, 25,10: 3136-3138<br />

Oztürk G, Cengiz N, Erdoğan E, Him A, Oğuz EK, Yenidünya E, Ayşit N.<br />

Two Distinct Types of Dying Back Axonal Degeneration In Vitro.<br />

Neuropathol Appl Neurobiol. 2012 Jul 27. doi: 10.1111/j.1365-2990.2012.01295.x. PubMed<br />

Ogiuchi Y, Maruoka Y, Ando T, Kobayashi M and Ogiuchi H<br />

Thymidylate synthase, thymidine phosphorylase and orotate phosphoribosyl transferase levels<br />

as predictive factors of chemotherapy in oral squamous cell carcinoma.<br />

Acta Histochem Cytochem, 2008, 41,3: 39-46<br />

Ohashi S, Abe H, Takahashi T, Yamamoto Y, Takeuchi M, Arai H, Nagata K, Kita T, Okamotu H,<br />

Yamamoto H and Doi T<br />

Advanced glycation end products increase collagen-specific chaperone protein in mouse<br />

diabetic nephropathy.<br />

J Biol Chem, 2004, 279,19: 19816-19823<br />

Ohkama-Ohtsu N, Radwan S, Peterson A, Zhao P, Badr AF, Xiang C and Oliver DJ<br />

Characterization of the extracellular gamma-glutamyl transpeptidases, GGT1 and GGT2, in<br />

Arabidopsis.<br />

Plant J, 2007, 49,5: 865-877<br />

Ohno C, Nakanishi Y, Honma T, Henmi A, Sugitani M, Kanai Y and Nemoto N<br />

Significance of system L amino acid transporter 1 (LAT-1) and 4F2 heavy chain (4F2hc)<br />

expression in human developing intestines.<br />

Acta Histochem Cytochem, 2009, 42,3: 73-81<br />

Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans MC, Beck J, Buckner<br />

B, Janick-Buckner D, Nettleton D, Scanlon MJ and Schnable PS<br />

Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).<br />

Plant J, 2007, 52,3: 391-404<br />

Ohta S, Uemura H, Matsui Y, Ishiguro H, Fujinami K, Kondo K, Miyamoto H, Yazawa T, Danenberg K,<br />

Danenberg PV, Tohnai I and Kubota Y<br />

Alterations of p16 and p14ARF genes and their 9p21 locus in oral squamous cell carcinoma.<br />

Oral Surg Oral Med Oral Pathol Oral Radiol Endod, 2009, 107,1: 81-91<br />

Ohuchida K, Mizumoto K, Ishikawa N, Fujii K, Konomi H, Nagai E, Yamaguchi K, Tsuneyoshi M and<br />

Tanaka M<br />

The role of S100A6 in pancreatic cancer development and its clinical implication as a<br />

diagnostic marker and therapeutic target.<br />

Clin Cancer Res, 2005, 11,21: 7785-7793<br />

Oikawa T, Nomura Y, Arai C, Noda K, Hanada N and Nakamura Y<br />

Mechanism of active eruption of molars in adolescent rats.<br />

Eur J Orthod, 2010, in press<br />

Okami N, Kawamata T, Yamamoto G, Okada Y, Hori T and Tachikawa T<br />

Laser microdissection-based analysis of hypoxia- and thioredoxin-related genes in human<br />

stable carotid plaques.<br />

Cardiovasc Pathol, 2009, 18,5: 294-300<br />

October 2012 50/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

O'Kane SL, Garimella V, Sivarajasingham N, Drew PJ and Cawkwell L<br />

Direct polymerase chain reaction amplification of formalin-fixed, paraffin-wax-embedded<br />

tissue after automated sequential laser microdissection and pressure catapulting.<br />

J Clin Pathol, 2007, 60,2: 216-217<br />

Okudela K, Yazawa T, Tajiri M, Omori T, Takahashi K, Woo T, Shimoyamada H, Ogawa N and Kitamura H<br />

A case of epithelial-myoepithelial carcinoma of the bronchus - a review of reported cases and<br />

a comparison with other salivary gland-type carcinomas of the bronchus.<br />

Pathol Res Pract, 2010, 206,2: 121-129<br />

Okudela K, Yazawa T, Woo T, Sakaeda M, Ishii J, Mitsui H, Shimoyamada H, Sato H, Tajiri M, Ogawa N,<br />

Masuda M, Takahashi T, Sugimura H and Kitamura H<br />

Down-regulation of DUSP6 expression in lung cancer: its mechanism and potential role in<br />

carcinogenesis.<br />

Am J Pathol, 2009, 175,2: 867-881<br />

Okudela K, Yazawa T, Tajiri M, Omori T, Takahashi K, Woo T, Shimoyamada H, Ogawa N and Kitamura H<br />

A case of epithelial-myoepithelial carcinoma of the bronchus - A review of reported cases and<br />

a comparison with other salivary gland-type carcinomas of the bronchus.<br />

Pathol Res Pract, 2010, 206,2: 121-129<br />

Okuducu AF, Janzen V, Hahne JC, Ko Y and Wernert N<br />

Influence of histochemical stains on quantitative gene expression analysis after laser-assisted<br />

microdissection.<br />

Int J Mol Med, 2003, 11: 449-453<br />

Olias P, Jacobsen ID and Gruber AD<br />

Fungal species identification from avian lung specimens by single hypha laser microdissection<br />

and PCR product sequencing.<br />

Med Mycol, 2011, 49,1: 56-61<br />

de Oliveira GP, Maximino JR, Lin CJ and Chadi G<br />

A method to immunolabel rodent spinal cord neurons and glia for molecular study in specific<br />

laser microdissected cells involved in neurodegenerative disorders.<br />

J Mol Histol, 2009, 40,3: 217-225<br />

Olofsson L, Lundgren A and Brodelius PE<br />

Trichome isolation with and without fixation using laser microdissection and pressure<br />

catapulting followed by RNA amplification: Expression of genes of terpene metabolism in<br />

apical and sub-apical trichome cells of Artemisia annua L.<br />

Plant Science, 2012, in press<br />

Olsson ME, Olofsson LM, Lindahl AL, Lundgren A, Brodelius M and Brodelius PE<br />

Localization of enzymes of artemisinin biosynthesis to the apical cells of glandular secretory<br />

trichomes of Artemisia annua L.<br />

Phytochemistry, 2009, 70,9: 1123-1128<br />

Oneda B, Lods N, Lottaz D, Becker-Pauly C, Stöcker W, Pippin J, Huguenin M, Ambort D, Marti HP and<br />

Sterchi EE<br />

Metalloprotease meprin beta in rat kidney: glomerular localization and differential expression<br />

in glomerulonephritis.<br />

PLoS ONE, 2008, 3,5: e2278<br />

Osamura RY, Egashira N, Kajiya H, Takei M, Tobita M, Miyakoshi T, Inomoto C, Takekoshi S and<br />

Teramoto A<br />

Pathology, pathogenesis and therapy of growth hormone (GH)-producing pituitary adenomas:<br />

technical advances in histochemistry and their contribution.<br />

Acta Histochem Cytochem, 2009, 42,4: 95-104<br />

Otto C, Giefing M, Massow A, Vater I, Gesk S, Schlesner M, Richter J, Klapper W, Hansmann ML, Siebert<br />

R, Küppers R.<br />

Genetic lesions of the TRAF3 and MAP3K14 genes in classical Hodgkin lymphoma.<br />

Br J Haematol. 2012 Jun;157(6):702-8. doi: 10.1111/j.1365-2141.2012.09113.x. PubMed<br />

October 2012 51/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Ou DL, Shen YC, Yu SL, Chen KF, Yeh PY, Fan HH, Feng WC, Wang CT, Lin LI, Hsu C and Cheng AL<br />

Induction of DNA damage-inducible gene GADD45ß contributes to sorafenib-induced apoptosis<br />

in hepatocellular carcinoma cells.<br />

Cancer Res, 2010, 70,22: 9309-9318<br />

Pajcini KV, Corbel SY, Sage J, Pomerantz JH and Blau HM<br />

Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian<br />

muscle.<br />

Cell Stem Cell, 2010, 7,2: 198-213<br />

Paredes J, Albergaria A, Oliveira JT, Jerónimo C, Milanezi F and Schmitt FC<br />

P-Cadherin overexpression is an indicator of clinical outcome in invasive breast carcinomas<br />

and is associated with CDH3 promoter hypomethylation.<br />

Clin Cancer Res, 2005, 11,16: 5869-5877<br />

Patt BT, Jarjoura D, Haddad DN, Sen CK, Roy S, Flavahan NA and Khayat RN<br />

Endothelial dysfunction in the microcirculation of patients with obstructive sleep apnea.<br />

Am J Respir Crit Care Med, 2010, 182,12: 1540-1545<br />

Patten AM, Jourdes M, Cardenas CL, Laskar DD, Nakazawa Y, Chung BY, Franceschi VR, Davin LB and<br />

Lewis NG<br />

Probing native lignin macromolecular configuration in Arabidopsis thaliana in specific cell wall<br />

types: further insights into limited substrate degeneracy and assembly of the lignins of ref8,<br />

fah 1-2 and C4H::F5H lines.<br />

Mol Biosyst, 2010, 6,3: 499-515<br />

Patterson-Fortin J, Shao G, Bretscher H, Messick TE and Greenberg RA<br />

Differential regulation of jamm domain deubiquitinating enzyme activity within the rap80<br />

complex.<br />

J Biol Chem, 2010, in press<br />

Pégorier S, Arouche N, Dombret MC, Aubier M and Pretolani M<br />

Augmented epithelial endothelin-1 expression in refractory asthma.<br />

J Allergy Clin Immunol, 2007, 120,6: 1301-1307<br />

Peiser C, Trevisani M, Groneberg DA, Dinh QT, Lencer D, Amadesi S, Maggiore B, Harrison S, Geppetti P<br />

and Fischer A<br />

Dopamine type 2 receptor expression and function in rodents sensory neurons projecting to<br />

the airways.<br />

Am J Physiol Lung Cell Mol Physiol, 2005, 289: L153-158<br />

Pendeville H, Carpino N, Marine JC, Takahashi Y, Muller M, Martial JA and Cleveland JL<br />

The ornithine decarboxylase gene is essential for cell survival during early murine<br />

development.<br />

Mol Cell Biol, 2001, 21,19: 6549-6558<br />

Peng T, Zhu J, Phasouk K, Koelle DM, Wald A, Corey L.<br />

An Effector Phenotype of CD8+ T Cells at the Junction Epithelium during Clinical Quiescence of<br />

Herpes Simplex Virus 2 Infection.<br />

J Virol. 2012 Oct;86(19):10587-96. PubMed<br />

Peng H, Hamanaka RB, Katsnelson J, Hao LL, Yang W, Chandel NS, Lavker RM.<br />

MicroRNA-31 targets FIH-1 to positively regulate corneal epithelial glycogen metabolism.<br />

FASEB J. 2012 Apr 24. PubMed PMID: 22532441. PubMed<br />

Percoco G, Bénard M, Ramdani Y, Lati E, Lefeuvre L, Driouich A, Follet-Gueye ML.<br />

Isolation of human epidermal layers by laser capture microdissection: application to the<br />

analysis of gene expression by quantitative real-time PCR.<br />

Exp Dermatol. 2012 Jul;21(7):531-4. doi: 10.1111/j.1600-0625.2012.01509.x. PubMed<br />

Pérez-Osorio AC, Williamson KS and Franklin MJ<br />

Heterogeneous rpoS and rhlR mRNA levels and 16S rRNA/rDNA (rRNA gene) ratios within<br />

Pseudomonas aeruginosa biofilms, sampled by laser capture microdissection.<br />

J Bacteriol, 2010, 192,12: 2991-3000<br />

October 2012 52/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Perrin FE, Boisset G, Lathuilière A and Kato AC<br />

Cell death pathways differ in several mouse models with motoneurone disease: analysis of<br />

pure motoneurone populations at a presymptomatic age.<br />

J Neurochem, 2006, 98,6: 1959-1972<br />

Perrin FE, Boisset G, Docquier M, Schaad O, Descombes P and Kato AC<br />

No widespread induction of cell death genes occurs in pure motoneurons in an ALS mouse<br />

model.<br />

Hum Mol Genet, 2005, 14,21: 3309-3321<br />

Persson A, Bäckvall H, Pontén F, Uhlén M and Lundeberg J<br />

Single cell gene mutation analysis using laser-assisted microdissection of tissue sections.<br />

Methods Enzymol, 2002, 356: 334-343<br />

Persson AE, Ling G, Williams C, Bäckvall H, Pontén J, Pontén F and Lundeberg J<br />

Analysis of p53 mutations in single cells obtained from histological tissue sections.<br />

Anal Biochem, 2000, 287: 25-31<br />

Petsch KA, Ma C, Scanlon MJ and Jorgensen RA<br />

Targeted forward mutagenesis by transitive RNAi.<br />

Plant J, 2010, 61: 873-882<br />

Petzold A, Tisdall MM, Girbes AR, Martinian L, Thom M, Kitchen N and Smith M<br />

In vivo monitoring of neuronal loss in traumatic brain injury: a microdialysis study.<br />

Brain, 2011, 134: 464-483<br />

Peveling-Oberhag J, Crisman G, Schmidt A, Döring C, Lucioni M, Arcaini L, Rattotti S, Hartmann S, Piiper<br />

A, Hofmann WP, Paulli M, Küppers R, Zeuzem S, Hansmann ML.<br />

Dysregulation of global microRNA expression in splenic marginal zone lymphoma and<br />

influence of chronic hepatitis C virus infection.<br />

Leukemia. 2012 Feb 6. doi: 10.1038/leu.2012.29. PubMed PMID: 22307176. PubMed<br />

Pfeil U, Lips KS, Eberling L, Grau V, Haberberger RV and Kummer W<br />

Expression of the high-affinity choline transporter, CHT1, in the rat trachea.<br />

Am J Resp Cell Mol Biol, 2003, 28: 473-477<br />

Pflugradt R, Schmidt U, Landenberger B, Sänger T and Lutz-Bonengel S<br />

A novel and effective separation method for single mitochondria analysis.<br />

Mitochondrion, 2011, 11,2: 308-314<br />

Pietrzyk M, Banas B, Wolf K, Rümmele P, Woenckhaus M, Hoffmann U, Krämer B and Fischereder M<br />

Quantitative gene expression analysis of fractalkine using laser microdissection in biopsies<br />

from kidney allografts with acute rejection.<br />

Transplant Proc, 2004, 36,9: 2659-266<br />

Pijuan L, Viciosa L, Bellosillo B, Ferrer MD, Baró T, Pedro C, Lloretta-Trull J, Munné A and Serrano S<br />

CD20-negative T-cell-rich B-cell lymphoma as a progression of a nodular lymphocytepredominant<br />

Hodkin’s lymphoma treated with rituximab.<br />

Am J Surg Pathol, 2005, 29,10: 1399-1403<br />

Pilchowski R, Stöhr R, von Eggeling F, Hartmann A, Wunderlich H and Junker K<br />

Specific protein patterns characterize metastatic potential of advanced bladder cancer.<br />

J Urol, 2011, in press<br />

Pinzani P, Lind K, Malentacchi F, Nesi G, Salvianti F, Villari D, Kubista M, Pazzagli M and Orlando C<br />

Prostate-specific antigen mRNA and protein levels in laser microdissected cells of human<br />

prostate measured by real-time reverse transcriptase-quantitative polymerase chain reaction<br />

and immuno-quantitative polymerase chain reaction.<br />

Hum Pathol, 2008, 39,10: 1474-1482<br />

Plessy C, Pascarella G, Bertin N, Akalin A, Carrieri C, Vassalli A, Lazarevic D, Severin J, Vlachouli C,<br />

Simone R, Faulkner GJ, Kawai J, Daub CO, Zucchelli S, Hayashizaki Y, Mombaerts P, Lenhard B,<br />

Gustincich S, Carninci P.<br />

Promoter architecture of mouse olfactory receptor genes.<br />

Genome Res. 2012 Mar;22(3):486-97. PubMed PMID: 22194471. PubMed<br />

October 2012 53/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Plog S, Mundhenk L, Bothe MK, Klymiuk N and Gruber AD<br />

Tissue and cellular expression patterns of porcine CFTR: similarities and differences to human<br />

CFTR.<br />

J Histochem Cytochem, 2010, 58,9: 785-797<br />

Plotkin J, Prockop SE, Lepique A and Petrie HT<br />

Critical Role for CXCR4 signaling in progenitor localization and T cell differentiation in the<br />

postnatal thymus.<br />

J Immunol, 2003, 171: 4521-4527<br />

Plummer S, Sharpe RM, Hallmark N, Mahood IK and Elcombe C<br />

Time-dependent and compartment-specific effects of in utero exposure to di(n-butyl)<br />

phthalate on gene/protein expression in the fetal rat testis as revealed by transcription<br />

profiling and laser capture microdissection.<br />

Toxicol Sci, 2007, 97,2: 520-532<br />

Poblete-Gutiérrez P, Wiederholt T, König A, Jugert FK, Marquardt Y, Rübben A, Merk HF, Happle R and<br />

Frank J<br />

Allelic loss underlies type 2 segemental Hailey-Hailey disease, providing molecular<br />

confirmation of a novel genetic concept.<br />

J Clin Invest, 2004, 114,10: 1467-1474<br />

Polster J, Dithmar H, Burgemeister R, Friedemann G and Feucht W<br />

Flavonoids in plant nuclei: detection by laser microdissection and pressure catapulting<br />

(LMPC), in vivo staining, and uv-visible spectroscopic titration.<br />

Physiol Plant, 2006, 128: 163-174<br />

Pontén F, Tomeras K and Larsson E<br />

Bättre sjukdomsbild i framtiden med laserbaserad mikrodissektion.<br />

Läkartidningen, 2002, Nr. 35, Volym 99: 3414-3418<br />

Pontén F, Williams C, Ling G, Ahmadian A, Nistér M, Lundeberg J, Pontén J and Uhlén M<br />

Genomic analysis of single cells from human basal cell cancer using laser-assisted capture<br />

microscopy.<br />

Mutation Research Genomics, 1997, 382: 45-55<br />

Pópulo H, Vinagre J, Lopes JM and Soares P<br />

Analysis of GNAQ mutations, proliferation and MAPK pathway activation in uveal melanomas.<br />

Br J Ophthalmol, 2011, 95,5: 715-719<br />

Porombka D, Baumgärtner W and Herden C<br />

A rapid method for gene expression analysis of Borna disease virus in neurons and astrocytes<br />

using laser microdissection and real-time RT-PCR.<br />

J Virol Methods, 2008, 148,1-2: 58-65<br />

Pothuri B, Leitao MM, Levine DA, Viale A, Olshen AB, Arroyo C, Bogomolniy F, Olvera N, Lin O, Soslow<br />

RA, Robson ME, Offit K, Barakat RR and Boyd J<br />

Genetic analysis of the early natural history of epithelial ovarian carcinoma.<br />

PLoS One, 2010, e10358<br />

Powe DG, Kormelink TG, Sisson M, Blokhuis BJ, Kramer MF, Jones NS and Redegeld FA<br />

Evidence for the involvement of free light chain immunoglobulins in allergic and nonallergic<br />

rhinitis.<br />

J Allergy Clin Immunol, 2010, 125,1: 139-145<br />

Press MF, Finn RS, Cameron D, Di Leo A, Geyer CE, Villalobos IE, Santiago A, Guzman R, Gasparyan A,<br />

Ma Y, Danenberg K, Martin AM, Williams L, Oliva C, Stein S, Gagnon R, Arbushites M and Koehler MT<br />

HER-2 gene amplification, HER-2 and epidermal growth factor receptor mRNA and protein<br />

expression, and lapatinib efficacy in women with metastatic breast cancer.<br />

Clin Cancer Res, 2008, 14,23: 7861-7870<br />

Pretto CM, Gaide Chevronnay HP, Cornet PB, Galant C, Delvaux D, Courtoy PJ, Marbaix E and Henriet P<br />

Production of interleukin-1α by human endometrial stromal cells is triggered during menses<br />

and dysfunctional bleeding and is induced in culture by epithelial interleukin-1α released upon<br />

ovarian steroids withdrawal.<br />

J Clin Endocrinol Metab, 2008, 93,10: 4126-4134<br />

October 2012 54/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Purdie KJ, Harwood CA, Gibbon K, Chaplin T, Young BD, Cazier JB, Singh N, Leigh IM and Proby CM<br />

High-resolution genomic profiling of human papillomavirus-associated vulval neoplasia.<br />

Br J Cancer, 2010, 102,6: 1044-1051<br />

Purwosunu Y, Sekizawa A, Okai T and Tachikawa T<br />

Quantitative RT-PCR gene expression analysis of a laser microdissected placenta: an approach<br />

to study preeclampsia.<br />

Methods Mol Biol, 2011, 755: 477-489<br />

Pyakurel P, Montag U, Castaños-Vélez E, Kaaya E, Christensson B, Tönnies H, Biberfeld P and Heiden T<br />

CGH of microdissected Kaposi's sarcoma lesions reveals recurrent loss of chromosome Y in<br />

early and additional chromosomal changes in late tumour stages.<br />

Aids, 2006, 20: 1805-1812<br />

Qin Y, Heine VM, Karst H, Lucassen PJ and Joels M<br />

Gene expression patterns in rat dentate granule cells: Comparison between fresh and fixed<br />

tissue.<br />

J Neurosci Methods, 2003, 131: 205-211<br />

Qiu X, Zhu X, Zhang L, Mao Y, Zhang J, Hao P, Li G, Lv P, Li Z, Sun X, Wu L, Zheng J, Deng Y, Hou C,<br />

Tang P, Zhang S and Zhang Y<br />

Human epithelial cancers secrete immunoglobulin G with unidentified specificity to promote<br />

growth and survival of tumor cells.<br />

Cancer Res, 2003, 63: 6488-6495<br />

Quint W, Jenkins D, Molijn A, Struijk L, van de Sandt M, Doorbar J, Mols J, Van Hoof C, Hardt K, Struyf F,<br />

Colau B.<br />

One virus, one lesion-individual components of CIN lesions contain a specific HPV type.<br />

J Pathol. 2011 Nov 30. doi: 10.1002/path.3970. PubMed<br />

Ráb P, Rábová M, Pereira CS, Collares-Pereira MJ and Pelikánová S<br />

Chromosome studies of European cyprinid fishes: interspecific homology of leuciscine<br />

cytotaxonomic marker-the largest subtelocentric chromosome pair as revealed by crossspecies<br />

painting.<br />

Chromosome Res, 2008, 16,6: 863-873<br />

Raffegerst SH, Hoelzlwimmer G, Kunder S, Mysliwietz J, Quintanilla-Martinez L and Schendel DJ<br />

Diverse hematological malignancies including hodgkin-like lymphomas develop in chimeric<br />

MHC class II transgenic mice.<br />

PLoS One, 2009, 4,12: 1-12<br />

Rahimi F, Shepherd CE, Halliday GM, Geczy CL and Raftery MJ<br />

Antigen-epitope retrieval to facilitate proteomic analysis of formalin-fixed archival brain<br />

tissue.<br />

Anal Chem, 2006, 78: 7216-7221<br />

Rakic JM, Lambert V, Devy L, Luttun A, Carmeliet P, Claes C, Nguyen L, Foidart JM, Noël A and Munaut C<br />

Placental growth factor, a member of the VEGF family, contributes to the development of<br />

choroidal neovascularization.<br />

Invest Ophthalmol Vis Sci, 2003, 44,7: 3186-3193<br />

Rakic JM, Lambert V, Deprez M, Foidart JM, Noël A and Munaut C<br />

Estrogens reduce the expression of YKL-40 in the retina: Implications for eye and joint<br />

diseases.<br />

Invest Ophthalmol Vis Scl, 2003, 44,4: 1740-1746<br />

Ramsay K, Wang Z and Jones MGK<br />

Using laser capture microdissection to study gene expression in early stages of giant cells<br />

induced by root-knot nematodes.<br />

Mol Plant Pathol, 2004, 5,6: 587-592<br />

Ratschiller D, Heighway J, Gugger M, Kappeler A, Pirnia F, Schmid RA, Borner MM and Betticher DC<br />

Cyclin D1 overexpression in bronchial epithelia of patients with lung cancer is associated with<br />

smoking and predicts survival.<br />

J Clin Oncol, 2003, 21,11: 2085-2093<br />

October 2012 55/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Raviraj V, Zhang H, Chien HY, Cole L, Thompson EW, Soon L.<br />

Dormant but migratory tumour cells in desmoplastic stroma of invasive ductal carcinomas.<br />

Clin Exp Metastasis. 2012 Mar;29(3):273-92. PubMed<br />

Regus-Leidig H, tom Dieck S and Brandstätter JH<br />

Absence of functional active zone protein Bassoon affects assembly and transport of ribbon<br />

precursors during early steps of photoreceptor synaptogenesis.<br />

Eur J Cell Biol, 2010, 89,6: 468-475<br />

Reid AJ, Mantovani C, Shawcross SG, Terenghi G and Wiberg M<br />

Phenotype of distinct primary sensory afferent subpopulations and caspase-3 expression<br />

following axotomy.<br />

Histochem Cell Biol, 2011, 136,1: 71-78<br />

Reid AJ, Welin D, Wiberg M, Terenghi G and Novikov LN<br />

Peripherin and ATF3 genes are differentially regulated in regenerating and non-regenerating<br />

primary sensory neurons.<br />

Brain Res, 2010, 1310: 1-7<br />

Reid AJ, Shawcross SG, Hamilton AE, Wiberg M and Terenghi G<br />

N-acetylcysteine alters apoptotic gene expression in axotomised primary sensory afferent<br />

subpopulations.<br />

Neurosci Res, 2009, 65,2: 148-155<br />

Reis RM, Hara A, Kleihues P and Ohgaki H<br />

Genetic evidence of the neoplastic nature of gemistocytes in astrocytomas.<br />

Acta Neuropathol, 2001, 102: 422-425<br />

Reizel Y, Chapal-Ilani N, Adar R, Itzkovitz S, Elbaz J, Maruvka Y, Segev E, Shlush LI, Dekel N, Shapiro E.<br />

Colon stem cell and crypt dynamics exposed by cell lineage reconstruction.<br />

PLoS Genet. 2011 Jul;7(7):e1002192. PubMed<br />

Ren Z-P, Sällström J, Sundström Ch, Nistér M and Olsson Y<br />

Recovering DNA and optimizing PCR conditions form microdissected formalin-fixed and<br />

paraffine embedded materials.<br />

Pathobiology, 2000, 68: 215-217<br />

Rezáčová O, Kubičková S, Cernhorska H and Rubes J<br />

Comparison of spontaneous background genomic aberration frequencies among cattle, pig and<br />

humans using dual-colored FISH.<br />

Chromosome Res, 2003: 715-724<br />

Richardson GD, Fantauzzo KA, Bazzi H, Määttä A and Jahoda CA<br />

Dynamic expression of syndecan-1 during hair follicle morphogenesis.<br />

Gene Expr Patterns, 2009, 9,6: 454-460<br />

Ritter JT, Tang-Feldman YJ, Lochhead GR, Estrada M, Lochhead S, Yu C, Ashton-Sager A, Tuteja D,<br />

Leutenegger C and Pomeroy C<br />

In vivo characterization of cytokine profiles and viral load during murine cytomegalovirusinduced<br />

acute myocarditis.<br />

Cardiovasc Pathol, 2010, 19,2: 83-93<br />

Rivet J, Mourah S, Murata H, Mounier N, Pisonero H, Mongiat-Artus P, Teillac<br />

P, Calvo F, Janin A and Dosquet C<br />

VEGF and VEGFR-1 are coexpressed by epithelial and stromal cells of renal cell carcinoma.<br />

Cancer, 2008, 112,2: 433-442<br />

Roberts NJ, Jiao Y, Yu J<br />

ATM Mutations in patients with hereditary pancreatic cancer.<br />

Cancer Discovery, 2012, 2: 41-46. PubMed<br />

Rodrıguez-Gonzalez FG, Mustafa DA, Mostert B, Sieuwerts AM.<br />

The challenge of gene expression profiling in heterogeneous clinical samples.<br />

Methods. 2012 May 29. PubMed<br />

October 2012 56/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Rödder S, Scherer A, Raulf F, Berthier C, Hertig A, Couzi L, Durrbach A, Rondeau E and Marti H<br />

Renal allografts with IF/TA display distinct expression profiles of metzincins and related<br />

genes.<br />

Am J Transplant, 2009, 9,3: 517-526<br />

Roehrl MH, Becker KF, Becker I and Höfler H<br />

Efficiency of single-cell polymerase chain reaction from stained histologic slides and integrity<br />

of DNA in archival tissue.<br />

Diagn Mol Pathol, 1997, 6,5: 292-297<br />

Roh MH, Yassin Y, Miron A, Mehra KK, Mehrad M, Monte NM, Mutter GL, Nucci MR, Ning G, Mckeon FD,<br />

Hirsch MS, Wa X and Crum CP<br />

High-grade fimbrial-ovarian carcinomas are unified by altered p53, PTEN and PAX2<br />

expression.<br />

Mod Pathol. 2010, 23,10: 1316-1324<br />

Röpke M, Boltze C, Neumann HW, Roessner A and Schneider-Stock R<br />

Genetic and epigenetic alterations in tumor progression in a dedifferentiated chondrosarcoma.<br />

Pathol Res Pract, 2003, 199: 437-444<br />

Roepman P, de Koning E, van Leenen D, de Weger RA, Kummer JA, Slootweg PJ and Holstege FC<br />

Dissection of a metastatic gene expression signature into distinct components.<br />

Genome Biol, 2006, 7,12: R117<br />

Roesch A, Vogt T, Stolz W, Dugas M, Landthaler M and Becker B<br />

Discrimination between gene expression patterns in the invasive margin and the tumour core<br />

of malignant melanomas.<br />

Melanoma Res, 2003, 13: 503-509<br />

Rohrbeck A and Borlak J<br />

Cancer genomics identifies regulatory gene networks associated with the transition from<br />

dysplasia to advanced lung adenocarcinomas induced by c-Raf-1.<br />

PLoS One, 2009, 4,10: e7315<br />

Rohrbeck A, Müller VS and Borlak J<br />

Molecular characterization of lung dysplasia induced by c-Raf-1.<br />

PLoS One, 2009, 4,5: e5637<br />

Romagnani P, Lazzeri E, Mazzinghi B, Lasagni L, Guidi S, Bosi A, Cirami C and Salvadori M<br />

Nephrotic syndrome and renal failure after allogeneic stem cell transplantation: Novel<br />

molecular diagnostic tools for a challenging differential diagnosis.<br />

Am J Kidney Dis, 2005, 46,3: 550-556<br />

Rook MS, Delach SM, Deyneko G, Worlock A and Wolfe JL<br />

Whole genome amplification of DNA from laser capture-microdissected tissue for highthroughput<br />

single nucleotide polymorphism and short tandem repeat genotyping.<br />

Am J Pathol, 2004, 164,1: 23-33<br />

Rosell R, Carcereny E, Gervais R, Vergnenegre A, Massuti B, Felip E, Palmero R, Garcia-Gomez R,<br />

Pallares C, Sanchez JM, Porta R, Cobo M, Garrido P, Longo F, Moran T, Insa A, De Marinis F, Corre R,<br />

Bover I, Illiano A, Dansin E, de Castro J, Milella M, Reguart N, Altavilla G, Jimenez U, Provencio M,<br />

Moreno MA, Terrasa J, Muñoz-Langa J, Valdivia J, Isla D, Domine M, Molinier O, Mazieres J, Baize N,<br />

Garcia-Campelo R, Robinet G, Rodriguez-Abreu D, Lopez-Vivanco G, Gebbia V, Ferrera-Delgado L,<br />

Bombaron P, Bernabe R, Bearz A, Artal A, Cortesi E, Rolfo C, Sanchez-Ronco M, Drozdowskyj A, Queralt<br />

C, de Aguirre I, Ramirez JL, Sanchez JJ, Molina MA, Taron M, Paz-Ares L;<br />

on behalf of the Spanish Lung Cancer Group in collaboration with the Groupe Français de Pneumo-<br />

Cancérologie and the Associazione Italiana Oncologia Toracica.<br />

Erlotinib versus standard chemotherapy as first-line treatment for European patients with<br />

advanced EGFR mutation-positive non-small-cell lung cancer (EURTAC): a multicentre, openlabel,<br />

randomised phase 3 trial.<br />

Lancet Oncol. 2012 Mar;13(3):239-246. PubMed<br />

October 2012 57/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Rosell R, Moran T, Queralt C, Porta R, Cardenal F, Camps C, Majem M, Lopez-Vivanco G, Isla D,<br />

Provencio M, Insa A, Massuti B, Gonzalez-Larriba JL, Paz-Ares L, Bover I, Garcia-Campelo R, Moreno MA,<br />

Catot S, Rolfo C, Reguart N, Palmero R, Sánchez JM, Bastus R, Mayo C, Bertran-Alamillo J, Molina MA,<br />

Sanchez JJ and Taron M<br />

Screening for epidermal growth factor receptor mutations in lung cancer.<br />

N Engl J Med, 2009, 361,10: 958-967<br />

Rossi DJ, Ylikorkala A, Korsisaari N, Salovaara R, Luukko K, Launonen V, Henkemeyer M, Ristimäki A,<br />

Aaltonen LA and Mäkelä TP<br />

Induction of cyclooxygenase-2 in a mouse model of Peutz-Jeghers polyposis.<br />

PNAS, 2002, 99,19: 12327-12332<br />

Roullet MR, Martinez D, Ma L, Fowler MH, McPhail ED, Judkins A, Arber DA and Bagg A<br />

Coexisting follicular and mantle cell lymphoma with each having an in situ component: A<br />

novel, curious, and complex consultation case of coincidental, composite, colonizing<br />

lymphoma.<br />

Am J Clin Pathol, 2010, 133,4: 584-591<br />

Roy S, Khanna S, Azad A, Schnitt R, He G, Weigert C, Ichijo H and Sen CK<br />

Fra-2 mediates oxygen-sensitive induction of transforming growth factor ß in cardiac<br />

fibroblasts.<br />

Cardiovasc Res, 2010, 87,4: 647-655<br />

Roy S, Khanna S, Hussain SR, Biswas S, Azad A, Rink C, Gnyawali S, Shilo S, Nuovo G and Sen CK<br />

MicroRNA expression in response to murine myocardial infarction: miR-21 regulates fibroblast<br />

metalloprotease-2 via phosphatase and tensin homologue.<br />

Cardiovasc Res, 2009, 82,1: 21-29<br />

Roy S, Khanna S, Kuhn DE, Rink C, Williams WT, Zweier JL and Sen CK<br />

Transcriptome analysis of the ischemia-reperfused remodeling myocardium: temporal changes<br />

in inflammation and extracellular matrix.<br />

Physiol Genomics, 2006, 25,3: 364-374<br />

Rubes J, Pagacova E, Kopecna O, Kubičkova S, Cernohorska H, Vahala and Di Berardino D<br />

Karyotype, centric fusion polymorphism and chromosomal aberrations in captive-born<br />

mountain reedbuck (Redunca fulvorufula).<br />

Cytogenet Genome Res, 2007, 116,4: 263-268<br />

Rubes J, Kubickova S, Pagacova E, Cernohorska H, Di Berardino D, Antoninova M, Vahala J and Robinson<br />

TJ<br />

Phylogenomic study of spiral-horned antelope by cross-species chromosome painting.<br />

Chromosome Res, 2008, 16,7: 935-947<br />

Rubie C, Oliveira Frick V, Wagner M, Schuld J, Graeber S, Brittner B, Bohle RM and Schilling MK<br />

ELR+ CXC chemokine expression in benign and malign colorectal conditions.<br />

BMC Cancer, 2008, 25,8: 178<br />

Rubie C, Frick VO, Wagner M, Rau B, Weber C, Kruse B, Kempf K, Tilton B, König J and Schilling M<br />

Enhanced expression and clinical significance of CC-chemokine MIPcarcinoma.<br />

Scand J Immunol, 2006, 63: 468-477<br />

Ruchusatsawat K, Wongpiyabovorn J, Protjaroen P, Chaipipat M, Shuangshoti S, Thorner PS and<br />

Mutirangura A<br />

Parakeratosis in skin is associated with loss of inhibitor of differentiation 4 via promoter<br />

methylation.<br />

Hum Pathol, 2011, in press<br />

Rübben A, Bausch B and Nikkels A<br />

Somatic deletion of the NF1 gene in a neurofibromatosis type 1-associated malignant<br />

melanoma demonstrated by digital PCR.<br />

Mol Cancer, 2006, 5: 36<br />

October 2012 58/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Rübben A, Kempf W, Kadin ME, Zimmermann DR and Burg G<br />

Multilineage progression of genetically unstable tumor subclones in cutaneous T-cell<br />

lymphoma.<br />

Exp Dermatol, 2004, 13: 472-483<br />

Ruel K, Berrio-Sierra J, Derikvand M, Pollet B, Thévenin J, Lapierre C, Jouanin L and Joseleau J<br />

Impact of CCR1 silencing on the assembly of lignified secondary walls in Arabidopsis thaliana.<br />

New Phytol, 2009, 184,1: 99-113<br />

Ruggiu M, McGovern VL, Lotti F, Saieva L, Li DK, Kariya S, Monani UR, Burghes A, Pellizzoni L.<br />

A role for SMN exon 7 splicing in the selective vulnerability of motor neurons in spinal<br />

muscular atrophy.<br />

Mol Cell Biol. 2012 Jan;32(1):126-38. PubMed PMID: 22037760. PubMed<br />

Rullman E<br />

Skeletal muscle matrix metalloproteinase and exercise in humans.<br />

Thesis, 2011: 1-54<br />

Rullman E, Norrbom J, Strömberg A, Wågsäter D, Rundqvist H, Haas T and Gustafsson T<br />

Endurance exercise activates matrix metalloproteinases in human skeletal muscle.<br />

Appl Physiol, 2009, 106,3: 804-812<br />

Rydström A and Wick MJ<br />

Monocyte and neutrophil recruitment during oral Salmonella infection is driven by MyD88derived<br />

chemokines.<br />

Eur J Immunol, 2009, 39,11: 3019-3030<br />

Ryu JK, Hong SM, Karikari CA, Hruban RH, Goggins MG and Maitra A<br />

Aberrant MicroRNA-155 expression is an early event in the multistep progression of pancreatic<br />

adenocarcinoma.<br />

Pancreatology, 2010, 10,1: 66-73<br />

Saal I, Gustin A, Rombaut K, Pelaez P, Rorive S, Remmelink M and Salmon I<br />

Laser-assisted microdissection applied to frozen surgical pathologic specimens – methodological<br />

aspects on RT-PCR.<br />

J Exp Ther Oncol, 2003, 3,6: 325-335<br />

Saare M, Sõritsa D, Vaidla K, Palta P, Remm M, Laan M, Karro H, Sõritsa A, Salumets A, D'Hooghe T,<br />

Peters M.<br />

No evidence of somatic DNA copy number alterations in eutopic and ectopic endometrial tissue<br />

in endometriosis.<br />

Hum Reprod. 2012 Jun;27(6):1857-64. PubMed PMID: 22473391. PubMed<br />

Sáenz-López P, Gouttefangeas C, Hennenlotter J, Concha A, Maleno I, Ruiz-Cabello F, Cózar JM, Tallada<br />

M, Stenzl A, Rammensee HG, Garrido F and Cabrera T<br />

Higher HLA class I expression in renal cell carcinoma than in autologous normal tissue.<br />

Tissue Antigens, 2010, 75,2: 110-118<br />

Saieg MA, Cury PM, Godleski JJ, Stearns R, Duarte LG, D'Agostino L, Kahn H, Pinto EM, Mauad T, Saldiva<br />

PH and Bernardi FD<br />

Differential elemental distribution of retained particles along the respiratory tract.<br />

Inhal Toxicol, 2011, 23,8: 459-67<br />

Sakai H, Ohuchida K, Mizumoto K, Cui L, Nakata K, Toma H, Nagai E, Tanaka M.<br />

Inhibition of p600 expression suppresses both invasiveness and anoikis resistance<br />

of gastric cancer.<br />

Ann Surg Oncol. 2011 Jul;18(7):2057-65. PubMed<br />

Sakaizawa K, Goto Y, Kiniwa Y, Uchiyama A, Harada K, Shimada S, Saida T, Ferrone S, Takata M, Uhara<br />

H, Okuyama R.<br />

Mutation analysis of BRAF and KIT in circulating melanoma cells at the single cell level.<br />

Br J Cancer. 2012 Feb 28;106(5):939-46. doi: 10.1038/bjc.2012.12. PubMed<br />

Sakamoto I, Ito Y, Mizuno M, Suzuki Y, Sawai A, Tanaka A, Maruyama S, Takei Y, Yuzawa Y, Matsuo S.<br />

Lymphatic vessels develop during tubulointerstitial fibrosis.<br />

Kidney Int, 2009, 75,8: 828-838<br />

October 2012 59/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Salek C, Minarikova P, Benesova L, Nosek V, Strnad R, Zavoral M and Minarik M<br />

Mutation status of K-ras, p53 and allelic losses at 9p and 18q are not prognostic markers in<br />

patients with pancreatic cancer.<br />

Anticancer Res, 2009, 29,5: 1803-1810<br />

Salek C, Benesova L, Zavoral M, Nosek V, Kasperova L, Ryska M, Strnad R, Traboulsi E and Minarik M<br />

Evaluation of clinical relevance of examining K-ras, p16 and p53 mutations along with allelic<br />

losses at 9p and 18q in EUS-guided fine needle aspiration samples of patients with chronic<br />

pancreatitis and pancreatic cancer.<br />

World J Gastroenterol, 2007, 13,27: 3714-3720<br />

Saller S, Kunz L, Dissen GA, Stouffer R, Ojeda SR, Berg D, Berg U and Mayerhofer A<br />

Oxytocin receptors in the primate ovary: molecular identity and link to apoptosis in human<br />

granulosa cells.<br />

Hum Reprod, 2010, 25,4: 969-976<br />

Sand-Dejmek J, Adelmant G, Sobhian B, Calkins AS, Marto J, Iglehart DJ and Lazaro JB<br />

Concordant and opposite roles of DNA-PK and the "facilitator of chromatin transcription"<br />

(FACT) in DNA repair, apoptosis and necrosis after cisplatin.<br />

Mol Cancer, 2011, 10: 74<br />

Sanderson NS, Le B, Zhou Z and Crews D<br />

Preoptic neuronal nitric oxide synthase induction by testosterone is consistent with a role in<br />

gating male copulatory behavior.<br />

Eur J Neurosci, 2008, 27,1: 183-190<br />

Sandow S, Meenzen C, Schütze K, Knitza R, Bieger W and Nevinny-Stickel C<br />

Isolation and characterization of fetal cells from maternal blood.<br />

Med Gen, 1997, 1: P9-17<br />

Santi S, Grisan S, Pierasco A, DE Marco F, Musetti R.<br />

Laser microdissection of grapevine leaf phloem infected by stolbur reveals site-specific gene<br />

responses associated to sucrose transport and metabolism.<br />

Plant Cell Environ. 2012 Jul 12. doi: 10.1111/j.1365-3040.2012.02577.x. PubMed<br />

Santi S and Schmidt W<br />

Laser microdissection-assisted analysis of the functional fate of iron deficiency-induced root<br />

hairs in cucumber.<br />

J Exp Bot, 2008, 59,3: 697-704<br />

Sanz MJ, Loarce Y, Ferrer E, Fominaya A.<br />

Use of tyramide-fluorescence in situ hybridization and chromosome microdissection for<br />

ascertaining homology relationships and chromosome linkage group associations in oats.<br />

Cytogenet Genome Res. 2012;136(2):145-56. PubMed<br />

Satkauskas S and Bagnard D<br />

Local protein synethsis in axonal growth cones. What is next?<br />

Cell Adhesion Migration, 2007, 4: 179-184<br />

Sato S, Maeda C, Hattori N, Yagi S, Tanaka S and Shiota K<br />

DNA Methylation-dependent modulator of Gsg2/Haspin gene expression.<br />

J Reprod Dev, 2011, 57,4: 526-533<br />

Sauer U, Ehnle S and Burgemeister R<br />

Laser Pressure Catapulting (LMPC) of sperm cells and optimisation of DNA isolation.<br />

PALM, 2004, Application Note, 1-4<br />

Scanlon MJ, Ohtsu K, Timmermans MC and Schnable PS<br />

Laser microdissection-mediated isolation and in vitro transcriptional amplification of plant<br />

RNA.<br />

Curr Protoc Mol Biol, 2009, Chapter 25: Unit 25A.3<br />

Schain F, Tryselius Y, Sjöberg J, Porwit A, Backman L, Malec M, Xu D, Vockerodt M, Baumforth KR, Wei<br />

W, Murray PG, Björkholm M and Claesson HE<br />

Evidence for a pathophysiological role of cysteinyl leukotrienes in classical Hodgkin<br />

lymphoma.<br />

Int J Cancer, 2008, 123,10: 2285-2293<br />

October 2012 60/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Scheidl SJ, Nilsson S, Kalén M, Hellström M, Takemoto M, Håkansson J and Lindahl P<br />

mRNA expression profiling of laser microbeam microdissected cells from slender embryonic<br />

structures.<br />

Am J Pathol, 2002, 160,3: 801-813<br />

Schessl J, Zou Y, McGrath MJ, Cowling BS, Maiti B, Chin SS, Sewry C, Battini R, Hu Y, Cottle DL,<br />

Rosenblatt M, Spruce L, Ganguly A, Kirschner J, Judkins AR, Golden JA, Goebel HH, Muntoni F, Flanigan<br />

KM, Mitchell CA and Bönnemann CG<br />

Proteomic identification of FHL1 as the protein mutated in human reducing body myopathy.<br />

J Clin Invest, 2008, 118,3: 904-912<br />

Schick B, Veldung B, Wemmert S, Jung V, Montenarh M, Meese E and Urbschat S<br />

P53 and Her-2/neu in juvenile angiofibromas.<br />

Oncol Rep, 2005, 13: 453-457<br />

Schick V, Majores M, Engels G, Spitoni S, Koch A, Elger CE, Simon M, Knobbe C, Blümcke I and Becker AJ<br />

Activation of Akt independent of PTEN and CTMP tumor-suppressor gene mutations in<br />

epilepsy-associated Taylor-type focal cortical dysplasias.<br />

Acta Neuropathol (Berl), 2006, 112,6: 715-725<br />

Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R and Rolletschek H<br />

A novel procedure for the quantitative analysis of metabolites, storage products and<br />

transcripts of laser microdissected seed tissues of Brassica napus.<br />

Plant Methods, 2011, in press<br />

Schlieben S, Kulmala J and Burgemeister R<br />

Direct isolation of poly-A(+)mRNA from individual laser microdissected cell samples obtained<br />

with the PALM MicroBeam system.<br />

Bio-Nobile, 2004, Technical Note 41000-003: 1-2<br />

Schlomm T, Luebke AM, Sultmann H, Hellwinkel OJ, Sauer U, Poustka A, David KA, Chun FK, Haese A,<br />

Graefen M, Erbersdobler A and Huland H<br />

Extraction and processing of high quality RNA from impalpable and macroscopically invisible<br />

prostate cancer for microarray gene expression analysis.<br />

Int J Oncol, 2005, 27,3: 713-720<br />

Schlott T, Scharf JG, Gorzel C, Middel P and Spring H<br />

Cirrhotic livers reveal genetic changes in the MDM2-P14ARF system of cell cycle regulators.<br />

Br J Cancer, 2002, 86: 1290-1296<br />

Schmid H, Henger A, Cohen CD, Frach K, Gröne HJ, Schlöndorff D and Kretzler M<br />

Gene expression profiles of podocyte-associated molecules as diagnostic markers in acquired<br />

proteinuric diseases.<br />

J Am Soc Nephrol, 2003, 14: 2958-2966<br />

Schmidt A, Schmitz R, Giefing M, Martin-Subero JI, Gesk S, Vater I, Massow A, Maggio E, Schneider M,<br />

Hansmann ML, Siebert R and Küppers R<br />

Rare occurrence of biallelic CYLD gene mutations in classical Hodgkin lymphoma.<br />

Genes Chromosomes Cancer, 2010, 49,9: 803-809<br />

Schmitz M, Driesch C, Beer-Grondke K, Jansen L, Runnebaum IB, Dürst M.<br />

Loss of gene function as a consequence of human papillomavirus DNA integration.<br />

Int J Cancer. 2012 Jan 19. doi: 10.1002/ijc.27433. PubMed<br />

Schmitz R, Hansmann ML, Bohle V, Martin-Subero J, Hartmann S, Mechtersheimer G, Klapper W, Vater I,<br />

Giefing M, Gesk S, Stanelle J, Siebert R and Küppers R<br />

TNFAIP3 (A20) is a tumor suppressor gene in Hodgkin lymphoma and primary mediastinal B<br />

cell lymphoma.<br />

J Exp Med, 2009, 206,5: 981-989<br />

Schneider-Stock R, Gerresheim F, Kolin-Gerresheim I, Meyer F, Jäger V, Epplen JT, Roessner A and<br />

Boltze C<br />

Different mRNA expression profile during tumor progression in a well-differentiated<br />

liposarcoma – A microdissection approach.<br />

Pathol Res Pract, 2003, 199: 445-450<br />

October 2012 61/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Schneider-Stock R, Boltze C, Jaeger V, Stumm M, Seiler C, Rys J, Schütze K and Roessner A<br />

Significance of loss of heterozygosity of the RB1 gene during tumor progresson in welldifferentiated<br />

liposarcomas.<br />

J Pathol, 2002, 197: 654-660<br />

Schneider-Stock R, Boltze C, Jäger V, Epplen J, Landt O, Peters B, Rys J and Roessner A<br />

Elevated telomerase activity, c-MYC-, and hTERT mRNA expression: association with tumour<br />

progression in malignant lipomatous tumours.<br />

J Pathol, 2003, 199: 517-525<br />

Schütze K, Buchstaller A, Niyaz Y, Melle C, Ernst G, David K, Schlomm T and von Eggeling F<br />

Sample preparation by laser microdissection and catapulting for proteome analysis.<br />

WILEY-VCH Verlag, Weinheim, 2008, Chapter:6.3, 219-234, ISBN-13: 978-3-527-31796-7<br />

Schütze K, Niyaz Y, Stich M and Buchstaller A<br />

Noncontact laser microdissection and catapulting for pure sample capture.<br />

Methods Cell Biol, 2007, 82: 649-673<br />

Schütze K, Lahr G and Burgemeister R<br />

The force of focused light in different areas of cell and molecular biology.<br />

J Mol Med, 2000, 78: B21<br />

Schütze K and Lahr G<br />

Use of laser technology for microdissection and isolation.<br />

Am Biotechn Lab, 1999, 17,4: 24-30<br />

Schütze K, Pösl H and Lahr G<br />

Laser micromanipulation systems as universal tools in cellular and molecular biology and in<br />

medicine.<br />

Cell Mol Biol, 1998, 44: 735-746<br />

Schütze K and Lahr G<br />

Laser Microdissection and Laser Catapulting; a key-technique for single cell based gene<br />

analysis.<br />

BIOforum Int, 1998, 4: 177-179<br />

Schütze K and Lahr G<br />

Identification of expressed genes by laser-mediated manipulation of single cells.<br />

Nature Biotechnol, 1998, 16,8: 737-742<br />

Schütze K, Becker I, Becker KF, Thalhammer S, Stark R, Heckl WM, Böhm M and Pösl H<br />

Cut out or poke in - the key to the world of single genes: laser micromanipulation as a valuable<br />

tool on the look-out for the origin of disease.<br />

Gen Anal, 1997, 14: 1-8<br />

Schütze K, Böhm M, Thalhammer S, Stark R, Heckl W and Pösl H<br />

Laser Mikroablation für die Genanalyse auf Einzelzellbasis.<br />

BIOforum, 1997, 3: 2-6<br />

Schulz MM, Buschner M, Leidig R, Wehner HD, Fritz P, Häbig K, Bonin M, Schütz M, Shiozawa T and<br />

Wehner F<br />

A new approach to the investigation of sexual offenses-cytoskeleton analysis reveals the<br />

origin of cells found on forensic swabs.<br />

J Forensic Sci, 2010, 55,2: 492-498<br />

Schumacher MA, Schmitz R, Brune V, Tiacci E, Döring C, Hansmann ML, Siebert R and Küppers R<br />

Mutations in the genes coding for the NF-кB regulating factors IкBα and A20 are uncommon in<br />

nodular lymphocyte-predominant Hodgkin lymphoma.<br />

Haematologica, 2010, 95,1: 153-137<br />

Schwarz C, Hauser P, Steininger R, Regele H, Heinze G, Mayer G and Oberbauer R<br />

Failure of BCL-2 up-regulation in proximal tubular epithel cells of donor kidney biopsy<br />

specimens is associated with apoptosis and delayed graft function.<br />

Lab Invest, 2002, 82,7: 941-948<br />

October 2012 62/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Schwering I, Bräuninger A, Distler V, Jesdinsky J, Diehl V, Hansmann ML, Rajewsky K and Küppers R<br />

Profiling of Hodgkin’s lymphoma cell line L1236 and germinal center B Cells: Identification of<br />

Hodgkin’s lymphoma-specific genes.<br />

Moleculare Medicine, 2003, 9,3/4: 85-95<br />

Seidl S, Burgemeister R, Hausmann R and Betz P<br />

Contact-free isolation of sperm and epithelial cells by Laser Microdissection and Pressure<br />

Catapulting.<br />

Forensic Sci Med Pathol, 2005, V1-2: 153-158<br />

Seitz G, Warmann SW, Fuchs J, Heitmann H, Mahrt J, Busse AC, Ruck P, Hoffman RM and Wessels JT<br />

Imaging of cell trafficking and metastases of paediatric rhabdomyosarcoma.<br />

Cell Prolif, 2008, 41,2: 365-374<br />

Seitz G, Warmann SW, Fuchs J, Mau-Holzmann UA, Ruck P, Heitmann H, Hoffman RM, Mahrt J, Müller GA<br />

and Wessels JT<br />

Visualization of xenotransplanted human rhabdomyosarcoma after transfection with red<br />

fluorescent protein.<br />

J Pediatr Surg, 2006, 41,8: 1369-1376<br />

Sekizawa A, Purwosunu Y, Yoshimura S, Nakamura M, Shimizu H, Okai T, Rizzo N and Farina A<br />

PP13 mRNA expression in trophoblasts from preeclamptic placentas.<br />

Reprod Sci, 2009, 16,4: 408-413<br />

Seo JY, Lee SH, Youn CS, Choi HR, Rhie GE, Cho KH, Kim KH, Park KC, Eun HC and Chung JH<br />

Ultraviolet radiation increases tropoelastin mRNA expression in the epidermis of human skin<br />

in vivo.<br />

J Invest Dermatol, 2001, 116: 915-919<br />

Serinsöz E, Bock O, Gwinner W, Schwarz A, Haller H, Kreipe H and Mengel M<br />

Local complement C3 expression is upregulated in humoral and cellular rejection of renal<br />

allografts.<br />

Am J Transplant, 2005, 5: 1490-1494<br />

Sethi N and Palefsky J<br />

Transcriptional profiling of dysplastic lesions in K14-HPV16 transgenic mice using laser<br />

microdissection.<br />

FASEB J, 2004, 18: 1243-1245<br />

Seto J, Gupta HS, Zaslansky P, Wagner HD and Fratzl P<br />

Tough lessons from bone: extreme mechanical anisotropy at the mesoscale.<br />

Adv Funct Mater, 2008, 18: 1905-1911<br />

Sevilla-Pérez J, Königshoff M, Kwapiszewska G, Amarie OV, Seeger W, Weissmann N, Schermuly RT,<br />

Morty RE and Eickelberg O<br />

Shroom expression is attenuated in pulmonary arterial hypertension.<br />

Eur Respir J, 2008, 32,4: 871-880<br />

Shao G, Lilli DR, Patterson-Fortin J, Coleman KA, Morrissey DE and Greenberg RA<br />

The Rap80-BRCC36 de-ubiquitinating enzyme complex antagonizes RNF8-Ubc13-dependent<br />

ubiquitination events at DNA double strand breaks.<br />

PNAS USA, 2009, 106,9: 3166-3171<br />

Shaikhibrahim Z, Lindstrot A, Ellinger J, Rogenhofer S, Buettner R and Wernert N<br />

Genes differentially expressed in the peripheral zone compared to the transitional zone of the<br />

normal human prostate and their potential regulation by ETS factors.<br />

Mol Med Report, 2012, 5,1: 32-36<br />

Shi C, Hong SM, Lim P, Kamiyama H, Khan M, Anders RA, Goggins M, Hruban RH and Eshleman JR<br />

KRAS2 mutations in human pancreatic acinar-ductal metaplastic lesions are limited to those<br />

with PanIN: implications for the human pancreatic cancer cell of origin.<br />

Mol Cancer Res, 2009, 7,2: 230-236<br />

Shi X, Kleeff J, Zhu ZW, Schmied B, Tang WH, Zimmermann A, Büchler M and Friess H<br />

Gene-expression analysis of single cells-nested polymerase chain reaction after laser<br />

microdissection.<br />

World J Gastroenterol, 2003, 9,6: 1337-1341<br />

October 2012 63/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Shima I, Katsuda S, Ueda Y, Takahashi N and Sasaki H<br />

Expression of matrix metalloproteinases in wound healing after glaucoma filtration surgery in<br />

rabbits.<br />

Ophthalmic Res, 2007, 39,6: 315-324<br />

Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M,<br />

Cremer T and Goldman RD<br />

The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization<br />

and transcription.<br />

Genes Dev, 2008, 22,24: 3409-3421<br />

Shimoyamada H, Yazawa T, Sato H, Okudela K, Ishii J, Sakaeda M, Kashiwagi K, Suzuki T, Mitsui H, Woo<br />

T, Tajiri M, Ohmori T, Ogura T, Masuda M, Oshiro H and Kitamura H<br />

Early growth response-1 induces and enhances vascular endothelial growth factor-A<br />

expression in lung cancer cells.<br />

Am J Pathol, 2010, 177,1: 70-83<br />

Simi L, Sestini R, Ferruzzi P, Gaglianò MS, Gensini F, Mascalchi M, Guerrini L, Pratesi C, Pinzani P, Nesi G,<br />

Ercolino T, Genuardi M and Mannelli M<br />

Phenotype variability of neural crest derived tumours in six italian families segregating the<br />

same founder SDHD mutation Q109X.<br />

J Med Genet, 2005, 42: e52<br />

Simon R, Eltze E, Schäfer KL, Bürger H, Semjonow A, Hertle L, Dockhorn-Dworniczak B, Terpe HJ and<br />

Böcker W<br />

Cytogenetic analysis of multifocal bladder cancer supports a monoclonal origin and<br />

intraepithelial spread of tumor cells.<br />

Cancer Res, 2001, 61: 355-362<br />

Simonin Y, Perrin FE and Kato AC<br />

Axonal involvement in the Wlds neuroprotective effect: analysis of pure motoneurons in a<br />

mouse model protected from motor neuron disease at a pre-symptomatic age.<br />

J Neurochem, 2007, 101: 530-542<br />

Singh AK, Riederer B, Krabbenhöft A, Rausch B, Bonhagen J, Lehmann U, de Jonge HR, Donowitz M, Yun<br />

C, Weinman EJ, Kocher O, Hogema BM and Seidler U<br />

Differential roles of NHERF1, NHERF2, and PDZK1 in regulating CFTR-mediated intestinal anion<br />

secretion in mice.<br />

J Clin Invest, 2009, 119,3: 540-550<br />

Sipos F, Muzes G, Valcz G, Galamb O, Tóth K, Leiszter K, Krenács T, Tulassay Z and Molnár B<br />

Regeneration associated growth factor receptor and epithelial marker expression in lymphoid<br />

aggregates of ulcerative colitis.<br />

Scand J Gastroenterol, 2010, 45,4: 440-448<br />

Skrzypczak M, Goryca K, Rubel T, Paziewska A, Mikula M, Jaroz D, Pachlewski J, Oledzki J and Ostrowsk J<br />

Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data<br />

directed for maximization of analytical reliability.<br />

PLoS One, 2010, 5,10: e13091<br />

Skuljec J, Gudi V, Ulrich R, Frichert K, Yildiz O, Pul R, Voss EV, Wissel K, Baumgärtner W and Stangel M<br />

Matrix metalloproteinases and their tissue inhibitors in cuprizone-induced demyelination and<br />

remyelination of brain white and gray matter.<br />

J Neuropathol Exp Neurol, 2011, 70,9: 758-769<br />

Slavova N, Drescher A, Visekruna A, Dullat S, Kroesen AJ, Ritz JP and Buhr HJ<br />

NALP expression in Paneth cells provides a novel track in IBD signaling.<br />

Langenbecks Arch Surg, 2010, 395,4: 351-357<br />

Slevin M, Turu MM, Rovira N, Luque A, Baldellou M, Krupinski J and Badimon L<br />

Identification of a 'snapshot' of co-expressed angiogenic markers in laser-dissected vessels<br />

from unstable carotid plaques with targeted arrays.<br />

J Vasc Res, 2009, 47,4: 323-335<br />

October 2012 64/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Slevin M, Krupinski J, Rovira N, Turu M, Luque A, Baldellou M, Sanfeliu C, de Vera N and Badimon L<br />

Identification of pro-angiogenic markers in blood vessels from stroked-affected brain tissue<br />

using laser-capture microdissection.<br />

BMC Genomics, 2009,10: 113<br />

Slotta-Huspenina J, Koch I, Richter M, Bink K, Kremer M, Specht K, Krugmann J, Quintanilla-Martinez L<br />

and Fend F<br />

Cyclin D1 positive multiple myeloma: predominance of the short, 3'UTR-deficient transcript is<br />

associated with high cyclin D1 mRNA levels in cases with t(11;14) translocation, but does not<br />

correlate with proliferation rate or genomic deletions.<br />

Leuk Res, 2008, 32,1: 79-88<br />

Smith B, Bodé S, Petersen BL, Jensen TK, Pipper C, Kloppenborg J, Boyé M, Krogfelt KA and Mølbak L<br />

Community analysis of bacteria colonizing intestinal tissue of neonates with necrotizing<br />

enterocolitis.<br />

BMC Microbiol. 2011, 12; 11:73<br />

Snoei J, Urbach H, Engels G, Fassunke J, von Lehe M, Becker AJ and Majores M<br />

Genetic alterations of protein-o-mannosyltransferase-1 in glioneuronal and glial brain tumors<br />

with subarachnoid spread.<br />

Neuropathology, 2009, 29,2: 116-124<br />

Sodir NM, Swigart LB, Karnezis AN, Hanahan D, Evan GI and Soucek L<br />

Endogenous Myc maintains the tumor microenvironment.<br />

Genes Dev, 2011, 25,9: 907-916<br />

Sohn P, Cox M, Chen D and Serra R<br />

Molecular profiling of the developing mouse axial skeleton: A role for Tgfbr2 in the<br />

development of the intervertebral disc.<br />

BMC Dev Biol, 2010, 10, 29<br />

Sokolova YY, McNally LR, Fuxa JR and Vinson SB<br />

Spore morphotypes of Thelohania solenopsae (microsporida) described microscopically and<br />

confirmed by PCR of individual spores microdissected from smears by position ablative laser<br />

microbeam microscopy.<br />

Microbiology, 2004, 150: 1261-1270<br />

Sokolova YY, McNally LR and Fuxa JR<br />

PCR-based analysis of spores isolated from smears by Laser Pressure Catapult Microdissection<br />

confirms genetic identity of spore morphotypes of the microsporidian Thelohania solenopsae.<br />

Eukaryot Microbiol, 2003, 50: 584-585<br />

Solakoglu O, Maierhofer C, Lahr G, Breit E, Scheunemann P, Heumos I, Pichlmeier U, Schlimok G,<br />

Oberneder R, Köllermann MW, Köllermann J, Speicher MR and Pantel K<br />

Heterogenous proliferative potential of occult metastatic cells in bone marrow of patients with<br />

solid epithelial tumors.<br />

PNAS, 2002, 99,4: 2246-2251<br />

Soltani-Arabshahi R, Leboeuf C, Rivet J, Pisonero H, Zhao WL, Bachelez H, Ameisen JC and Janin A<br />

Bcl-xL gene expression correlated with lower apoptotic cell numbers and shorter progressionfree<br />

survival in PCFCL.<br />

J Invest Dermatol, 2009, 129,7: 1703-1709<br />

Sommerer F, Hengge UR, Markwarth A, Vomschloss S, Stolzenburg JU, Wittekind C and Tannapfel A<br />

Mutations of BRAF and RAS are rare events in germ cell tumours.<br />

Int J Cancer, 2005, 113,2: 329-335<br />

Sorrentino C, Musiani P, Pompa P, Cipollone G, Di <strong>Carl</strong>o E.<br />

Androgen deprivation boosts prostatic infiltration of cytotoxic and regulatory T lymphocytes<br />

and has no effect on disease-free survival in prostate cancer patients.<br />

Clin Cancer Res. 2011 Mar 15;17(6):1571-81. PubMed<br />

Sorrentino C and Di <strong>Carl</strong>o E<br />

Expression of IL-32 in human lung cancer is related to the histotype and metastatic<br />

phenotype.<br />

Am J Respir Crit Care Med, 2009, 180,8: 769-779<br />

October 2012 65/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Sotlar K, Colak S, Bache A, Berezowska S, Krokowski M, Bültmann B, Valent P and Horny HP<br />

Variable presence of KIT D816V in clonal haematological non-mast cell lineage diseases<br />

associated with systemic mastocytosis (SM-AHNMD).<br />

J Pathol, 2010, 220,5: 586-595<br />

Sotlar K, Bache A, Stellmacher F, Bültmann B, Valent P and Horny HP<br />

Systemic mastocytosis associated with chronic idiopathic myelofibrosis: a distinct subtype of<br />

systemic mastocytosis associated with a [corrected] clonal hematological non-mast<br />

[corrected] cell lineage disorder carrying the activating point mutations KITD816V and<br />

JAK2V617F.<br />

J Mol Diagn, 2008, 10,1: 58-66<br />

Sotlar K, Fridrich C, Mall A, Jaussi R, Bültmann B, Valent P and Horny HP<br />

Detection of c-kit point mutation ASP-816�Val in microdissected pooled single mast cells and<br />

leukemic cells in a patient with systemic mastocytosis and concomitant chronic<br />

myelomonocytic leukemia.<br />

Leukemia Res, 2002, 26: 979-984<br />

Specht K, Kremer M, Müller U, Dirnhofer S, Rosemann, M, Höfler H, Quintanilla-Martinez L and Fend F<br />

Identification of cyclin D1 mRNA overexpression in B-cell neoplasias by real-time reverse<br />

transcription–PCR of microdissected paraffin sections.<br />

Clin Cancer Res, 2002, 8: 2902-2911<br />

Specht K, Richter T, Müller U, Walch A, Werner M and Höfler H<br />

Quantitative gene expression analysis in microdissected archival formalin-fixed and paraffinembedded<br />

tumor tissue.<br />

Am J Pathol, 2001, 158,2: 419-429<br />

Spee B, Carpino G, Schotanus BA, Katoonizadeh A, Vander Borght S, Gaudio E and Roskams T<br />

Characterisation of the activated liver progenitor cell niche, potential involvement of Wnt and<br />

Notch signalling.<br />

Gut, 2010, 59,2: 247-257<br />

Spinnler K, Köhn FM, Schwarzer U and Mayerhofer A<br />

Glial cell line-derived neurotrophic factor is constitutively produced by human testicular<br />

peritubular cells and may contribute to the spermatogonial stem cell niche in man.<br />

Hum Reprod, 2010, 25,9: 2181-2187<br />

Springer J, McGregor GP, Fink L and Fischer A<br />

Alternative splicing in single cells dissected from complex tissues: separate expression of<br />

prepro-tachykinin A mRNA splice variants in sensory neurones.<br />

J Neurochem, 2003, 85: 882-888<br />

Srivastava AC, Palanichelvam K, Ma J, Steele J, Blancaflor EB and Tang Y<br />

Collection and analysis of expressed sequence tags derived from laser capture microdissected<br />

Switchgrass (Panicum virgatum L. Alamo) vascular tissues.<br />

Bioenerg Res, 2010, 3: 278-294<br />

Stadlbauer TH, Wagner A, Hölschermann H, Fiedel S, Fingerhuth H, Tillmanns H, Bohle RM and Hecker M<br />

AP-1 and STAT-1 decoy oligodeoxynucleotides attenuate transplant vasculopathy in rat cardiac<br />

allografts.<br />

Cardiovasc Res, 2008, 79,4: 698-705<br />

Staquicini F, Pasqualini R and Arap W<br />

MUC18 targeting peptides.<br />

United States Patent Application Publication, 2012, PCT/US09,60858<br />

Steger K, Fink L, Klonisch T, Bohle RM and Bergmann M<br />

Protamine-1 and –2 mRNA in round spermatids is associated with RNA-binding proteins.<br />

Histochem Cell Biol, 2002, 117: 227-234<br />

Steilmann C, Cavalcanti MC, Bergmann M, Kliesch S, Weidner W and Steger K<br />

Aberrant mRNA expression of chromatin remodelling factors in round spermatid maturation<br />

arrest compared with normal human spermatogenesis.<br />

Mol Hum Reprod, 2010, 16,10: 726-733<br />

October 2012 66/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Steinmetz OM, Panzer U, Fehr S, Meyer-Schwesinger C, Stahl RA and Wenzel UO<br />

A pitfall of glomerular sieving: profibrotic and matrix proteins derive from the Bowman's<br />

capsule and not the glomerular tuft in rats with renovascular hypertension.<br />

Nephrol Dial Transplant, 2007, 22,10: 3055-3060<br />

Steinmetz OM, Sadaghiani S, Panzer U, Krebs C, Meyer-Schwesinger C, Streichert T, Fehr S, Hamming I,<br />

van Goor H, Stahl RAK and Wenzel U<br />

Antihypertensive therapy induces compartment specific chemokine expression and a Th1<br />

immune response in the clipped kidney of Goldblatt hypertensive rats.<br />

Am J Physiol Renal Physiol, 2007, 292,2: F876-887<br />

Stemmer K and Dietrich DR<br />

Application of laser-capture microdissection to study renal carcinogenesis.<br />

Methods Mol Biol, 2011, 755: 279-290<br />

Stemmer K, Ellinger-Ziegelbauer H, Ahr HJ and Dietrich DR<br />

Molecular characterization of preneoplastic lesions provides insight on the development of<br />

renal tumors.<br />

Am J Pathol, 2009, 175,4: 1686-1698<br />

Stemmer K, Ellinger-Ziegelbauer H, Lotz K, Ahr HJ and Dietrich DR<br />

Establishment of a protocol for the gene expression analyis of laser microdissected rat kidney<br />

samples with affymetrix genechips.<br />

Toxicol Appl Pharmacol, 2006, 217,1: 134-142<br />

Stewart L, Hindmarch CC, Qiu J, Tung YC, Yeo GS and Murphy D<br />

Hypothalamic transcriptome plasticity in two rodent species reveals divergent differential<br />

gene expression but conserved pathways.<br />

J Neuroendocrinol, 2011, 23,2: 177-185<br />

Stierum R, Burgemeister R, van Helvoort A, Peijnenburg A, Schütze K, Seidelin M, Vang O and van<br />

Ommen B<br />

Functional foods against colorectal cancer. An example project integrating functional<br />

genomics, nutrition and health.<br />

Nutr Metab Cardiovasc Dis, 2001, 11,4: 94-98<br />

Stocker CJ, Wargent ET, Martin-Gronert MS, Cripps RL, O'Dowd JF, Zaibi MS, Cottrell EC, Mercer JG,<br />

Duncan JS, Cawthorne MA, Ozanne SE, Arch JR.<br />

Leanness in postnatally nutritionally programmed rats is associated with increased sensitivity<br />

to leptin and a melanocortin receptor agonist and decreased sensitivity to neuropeptide Y.<br />

Int J Obes (Lond). 2011 Nov 29. doi: 10.1038/ijo.2011.226. PubMed<br />

Stoecklein NH, Erbersdobler A, Schmidt-Kittler O, Diebold J, Schardt JA, Izbicki JR and Klein CA<br />

SCOMP is superior to degenerated oligonucleotide primed-polymerase chain reaction for global<br />

amplification of minute amounts of DNA from microdissected archival tissue samples.<br />

Am J Pathol, 2002, 161,1: 43-51<br />

Stoehlmacher J, Goekkurt E, Mogck U, Aust D, Kramer M, Baretton G, Liersch T, Ehninger G, and Jakob C<br />

Thymidylate synthase genotypes and tumour regression in stage II/III rectal cancer patients<br />

after neoadjuvant fluorouracil-based chemoradiation.<br />

Cancer Lett, 2008, 272,2: 221-225<br />

Stoehr R, Wissmann C, Suzuki H, Knuechel R, Krieg RC, Klopocki E, Dahl E, Wild P, Blaszyk H, Sauter G,<br />

Simon R, Schmitt R, Zaak D, Hofstaedter F, Rosenthal A, Baylin SB, Pilarsky C and Hartmann A<br />

Deletions of chromosome 8b and loss of sFRP1 expression are progression markers of<br />

papillary bladder cancer.<br />

Lab Inverst, 2004, 84: 465-478<br />

Stoehr R, Brinkmann A, Filbeck T, Gamper C, Wild P, Blaszyk H, Hofstädter F, Knüchel R and Hartmann A<br />

No evidence for mutation of B-RAF in urothelial carcinomas of the bladder and upper urinary<br />

tract.<br />

Oncol Rep, 2004, 11: 137-141<br />

October 2012 67/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Stoehr R, Wild P and Hartmann A<br />

Lasermicrodissection – An important prerequisite for the molecular-genetic analysis of bladder<br />

cancer.<br />

Pathol Res Pract, 2003, 199: 355-362<br />

Stoehr R, Knuechel R, Boecker J, Blaszyk H, Schmitt R, Filbeck T, Hofstaedter F and Hartmann A<br />

Histologic-genetic mapping by allele-specific PCR reveals intraurothelial spread of p53 mutant<br />

tumor clones.<br />

Lab Invest, 2002, 82,11: 1553-1561<br />

Stoehr R, Krieg R, Knuechel R, Hofstaedter F, Pilarsky C, Zaak D, Schmitt R and Hartmann A<br />

No evidence for involvement of ß-catenin and APC in urothelial carcinomas.<br />

Int J Oncol, 2002, 20: 905-911<br />

Stoehr R, Hartmann A, Hindlmeyer E, Mürle K, Wieland W and Knuechel R<br />

Oligoclonality of early lesions of the urothelium as determined by microdissection-supported<br />

genetic analysis.<br />

Pathobiology, 2000, 68: 165-172<br />

Stolle K, Weitkamp B, Rauterberg J, Lorkowski S and Cullen P<br />

Laser microdissection-based analysis of mRNA expression in human coronary arteries with<br />

intimal thickening.<br />

J Histochem Cytochem, 2004, 52,11: 1511-1518<br />

Stybayeva G, Zhu H, Ramanculov E, Dandekar S, George M and Revzin A<br />

Micropatterned co-cultures of T-lymphocytes and epithelial cells as a model of mucosal<br />

immune system.<br />

Biochem Biophys Res Commun, 2009, 380,3: 575-580<br />

Subramaniam MM, Ng SB, Seah SB, Anuar D, Soong R and Lee VK<br />

Molecular characterization of dedifferentiated mucoepidermoid carcinoma of the trachea using<br />

laser microdissection-based TP53 mutation analysis.<br />

Histopathology, 2009, 55,4: 472-475<br />

Sukhotnik I, Mogilner JG, Shaoul R, Karry R, Lieber M, Suss-Toby E, Ure BM and Coran AG<br />

Responsiveness of intestinal epithelial cell turnover to TGF-alpha after bowel resection in a rat<br />

is correlated with EGF receptor expression along the villus-crypt axis.<br />

Pediatr Surg Int, 2008, 24,1: 21-28<br />

Sun Y, Shukla GS, Weaver D, Pero SC and Krag DN<br />

Phage-display selection on tumor histological specimens with laser capture microdissection.<br />

J Immunol Methods, 2009, 347,1-2: 46-53<br />

Svrcek M, Buhard O, Colas C, Coulet F, Dumont S, Massaoudi I, Lamri A, Hamelin R, Cosnes J, Oliveira C,<br />

Seruca R, Gaub MP, Legrain M, Collura A, Lascols O, Tiret E, Fléjou J and Duval A<br />

Methylation tolerance due to an O 6 -methylguanine DNA methyltransferase (MGMT) field defect<br />

in the colonic mucosa: an initiating step in the development of mismatch repair-deficient<br />

colorectal cancers.<br />

Gut, 2010, 59,11: 1516-1526<br />

Szatanek R, Drabik G, Baran J, Kolodziejczyk P, Kulig J, Stachura J and Zembala M<br />

Detection of isolated tumour cells in the blood and bone marrow of patients with gastric<br />

cancer by combined sorting, isolation and determination of MAGE-1, -2 mRNA expression.<br />

Oncol Rep, 2008, 19,4: 1055-1060<br />

Tachikawa T and Irié T<br />

A new molecular biology approach in morphology: basic method and application of laser<br />

microdissection.<br />

Mod Electron Microsc, 2004, 37: 82-88<br />

Tamburrino L, Salvianti F, Marchiani S, Pinzani P, Nesi G, Serni S, Forti G, Baldi E.<br />

Androgen receptor (AR) expression in prostate cancer and progression of the tumor: Lessons<br />

from cell lines, animal models and human specimens.<br />

Steroids. 2012 Jan 24. [Epub ahead of print] PubMed<br />

October 2012 68/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Tanaka T<br />

Quantitative analysis of the enzymes associated with 5-fluorouracil metabolism in prostate<br />

cancer biopsies.<br />

Methods Mol Biol, 201, 755: 301-305<br />

Tanaka T, Kawashima H, Matsumura K, Yamashita-Hosono T, Yoshimura R, Kuratsukuri K, Harimoto K,<br />

and Nakatani T<br />

Overexpression of orotate phosphoribosyl transferase in hormone-refractory prostate cancer.<br />

Oncol Rep, 2009, 21,1: 33-37<br />

Tannapfel A, Sommerer F, Benicke M, Katalinic A, Uhlmann D, Witzigmann H, Hauss J and Wittekind C<br />

Mutations of the BRAF gene in cholangiocarcinoma but not in hepatocellular carcinoma.<br />

Gut, 2003, 52: 706-712<br />

Tashiro S, Walter J, Shinohara A, Kamada N and Cremer T<br />

Rad51 Accumulation at sites of DNA damage and in postreplicative chromatin.<br />

J Cell Biol, 2000, 150,2: 283-291<br />

Teramoto K, Negoro N, Kitamoto K, Iwai T, Iwao H, Okamura M and Miura K<br />

Microarray analysis of glomerular gene expression in murine lupus nephritis.<br />

J Pharmacol Sci, 2008, 106,1: 56-67<br />

Teshima T, Hara Y, Takekoshi S, Teramoto A, Osamura RY and Tagawa M<br />

Expression of genes related to corticotropin production and glucocorticoid feedback in<br />

corticotroph adenomas of dogs with Cushing's disease.<br />

Domest Anim Endocrinol, 2009, 36,1: 3-12<br />

Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />

Laser microtools in cell biology and molecular medicine.<br />

Laser Physics, 2003, 13: 681-691<br />

Thelen P, Burfeind P, Grzmil M, Voigt S, Ringert RH and Hemmerlein B<br />

cDNA microarray analysis with amplified RNA after isolation of intact cellular RNA from<br />

neoplastic and non-neoplastic prostate tissue separated by laser microdissections.<br />

Int J Oncol, 2004, 24: 1085-1092<br />

Theophile K, Jonigk D, Kreipe H and Bock O<br />

Amplification of mRNA from laser-microdissected single or clustered cells in formalin-fixed<br />

and paraffin-embedded tissues for application in quantitative real-time PCR.<br />

Diagn Mol Pathol, 2008, 17,2: 101-106<br />

Thiel J, Hollmann J, Rutten T, Weber H, Scholz U, Weschke W.<br />

454 transcriptome sequencing suggests a role for two-component signalling in cellularization<br />

and differentiation of barley endosperm transfer cells.<br />

PLoS One. 2012;7(7):e41867. PubMed<br />

Thiel J, Riewe D, Rutten T, Melzer M, Friedel S, Bollenbeck F, Weschke W, Weber H.<br />

Differentiation of endosperm transfer cells of barley: a comprehensive analysis at the microscale.<br />

Plant J. 2012 Apr 9. doi: 10.1111/j.1365-313X.2012.05018.x. PubMed<br />

Thiel J, Weier D, Sreenivasulu N, Strickert M, Weichert N, Melzer M, Czauderna T, Wobus U, Weber H and<br />

Weschke W<br />

Different hormonal regulation of cellular differentiation and function in nucellar projection and<br />

endosperm transfer cells: a microdissection-based transcriptome study of young barley grains.<br />

Plant Physiol, 2008, 148,3: 1436-1452<br />

Thirlwell C, Will OC, Domingo E, Graham TA, McDonald SA, Oukrif D, Jeffrey R, Gorman M, Rodriguez-<br />

Justo M, Chin-Aleong J, Clark SK, Novelli MR, Jankowski JA, Wright NA, Tomlinson IP and Leedham SJ<br />

Clonality assessment and clonal ordering of individual neoplastic crypts shows polyclonality of<br />

colorectal adenomas.<br />

Gastroenterology, 2010, 138,4: 1441-1454<br />

October 2012 69/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Thiyagarajan D, Fismen S, Seredkina N, Jacobsen S, Elung-Jensen T, Kamper AL, Fenton CG, Rekvig OP,<br />

Mortensen ES.<br />

Silencing of renal DNaseI in murine lupus nephritis imposes exposure of large chromatin<br />

fragments and activation of Toll like receptors and the Clec4e.<br />

PLoS One. 2012;7(3):e34080. PubMed PMID: 22479529. PubMed<br />

Thompson KA, Cherry CL, Bell JE andMcLean CA<br />

Brain cell reservoirs of latent virus in presymptomatic HIV-infected individuals.<br />

Am J Pathol, 2011, 179,4: 1623-1629<br />

Thompson KA, Varrone JJ, Jankovic-Karasoulos T, Wesselingh SL and McLean CA<br />

Cell-specific temporal infection of the brain in a simian immunodeficiency virus model of<br />

human immunodeficiency virus encephalitis.<br />

J Neurovirol, 2009, 15: 300-311<br />

Thuret R, Chantrel-Groussard K, Azzouzi AR, Villette JM, Guimard S, Teillac P, Berthon P, Houlgatte A,<br />

Latil A and Cussenot O<br />

Clinical relevance of genetic instability in prostatic cells obtained by prostatic massage in early<br />

prostate cancer.<br />

Br J Cancer, 2005, 92,2: 236-240<br />

Tian XF, Fan XG, Zhang Y, Huang Y, Dai H and Ying RS<br />

Procuration and identification of bacteria in paraffin-embedded liver tissues of hepatocellular<br />

carcinoma by laser-assisted microdissection technique.<br />

APMIS, 2008, 116,1: 10-15<br />

Tidow N, Boecker A, Schmidt H, Agelopoulos K, Boecker W, Buerger H and Brandt B<br />

Distinct amplification of an untranslated regulatory sequence in the egfr gene contributes to<br />

early steps in breast cancer development.<br />

Cancer Res, 2003, 63,6: 1172-1178<br />

Timmer M<br />

Neurobiological mechanisms involved in the establishment and maintenance of ominance<br />

hierarchies and its modulation by stress in rats.<br />

Thesis, 2011, 1-150.<br />

Todd R and Margolin DH<br />

Challenges of single-cell diagnostics: analysis of gene expression.<br />

TRENDS in Molecular Medicine, 2002, Research Update, 8,6: 254-257<br />

Tomikawa J, Uenoyama Y, Ozawa M, Fukanuma T, Takase K, Goto T, Abe H, Ieda N, Minabe S, Deura C,<br />

Inoue N, Sanbo M, Tomita K, Hirabayashi M, Tanaka S, Imamura T, Okamura H, Maeda K, Tsukamura H.<br />

Epigenetic regulation of Kiss1 gene expression mediating estrogen-positive feedback action in<br />

the mouse brain.<br />

Proc Natl Acad Sci U S A. 2012 May 15;109(20):E1294-301. PubMed PMID: 22505735. PubMed<br />

Tomioka I, Maeda T, Shimada H, Kawai K, Okada Y, Igarashi H, Oiwa R, Iwasaki T, Aoki M, Kimura T,<br />

Shiozawa S, Shinohara H, Suemizu H, Sasaki E and Okano H<br />

Generating induced pluripotent stem cells from common marmoset (Callithrix jacchus) fetal<br />

liver cells using defined factors, including Lin28.<br />

Genes Cells, 2010, 15,9: 959-969<br />

Tomita N, Nakamura N, Kanamori H, Fujimaki K, Fujisawa S, Ishigatsubo Y and Nomura K<br />

Atypical Burkitt lymphoma arising from follicular lymphoma: demonstration by polymerase<br />

chain reaction following laser capture microdissection and by fluorescence in situ<br />

hybridization on paraffin-embedded tissue sections.<br />

Am J Surg Pathol, 2005, 29,1: 121-124<br />

Tommeras K, Bakke I, Sandvik AK, Larsson E and Waldum HL<br />

Rat parietal cells express CCK 2 receptor mRNA: gene expression analysis of single cells<br />

isolated by laser-assisted microdissection.<br />

Biochem Biophys Res Commun, 2002, 297,2: 335-340<br />

October 2012 70/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Toriumi K, Mouri A, Narusawa S, Aoyama Y, Ikawa N, Lu L, Nagai T, Mamiya T, Kim HC, Nabeshima T.<br />

Prenatal NMDA receptor antagonism impaired proliferation of neuronal progenitor, leading to<br />

fewer glutamatergic neurons in the prefrontal cortex.<br />

Neuropsychopharmacology. 2012 Jan 18. doi: 10.1038/npp.2011.324. PubMed<br />

Torkos A, Wissel K, Warnecke A, Lenarz T and Stöver T<br />

Technical report: Laser microdissection and pressure catapulting is superior to conventional<br />

manual dissection for isolating pure spiral ganglion fractions from the cochlea.<br />

Hear Res, 2008, 235(1-2): 8-14<br />

Tort F, Hernàndez S, Beà S, Martínez A, Esteller M, Herman JG, Puig X, Camacho E, Sánchez M, Nayach<br />

I, Lopez-Guillermo A, Fernández PL, Colomer D, Hernàndez L and Campo E<br />

CHK2-decreased protein expression and infrequent genetic alterations mainly occur in<br />

aggressive types of non-Hodgkin lymphomas.<br />

Blood, 2002, 100,13: 4602-4608<br />

Torti S, Fornara F, Vincent C, Andrés F, Nordström K, Göbel U, Knoll D, Schoof H, Coupland G.<br />

Analysis of the Arabidopsis shoot meristem transcriptome during floral transition identifies<br />

distinct regulatory patterns and a leucine-rich repeat protein that promotes flowering.<br />

Plant Cell. 2012 Feb 10. [Epub ahead of print] PubMed<br />

Tsubaki T, Arita N, Kawakami T, Shiratsuchi T, Yamamoto H, Takubo N, Yamada K, Nakata S, Yamamoto<br />

S and Nose M<br />

Characterization of histopathology and gene-expression profiles of synovitis in early<br />

rheumatoid arthritis using targeted biopsy specimens.<br />

Arthritis Res Ther, 2005, 7,4: R825-836<br />

Tsubaki T, Takegawa S, Hanamoto H, Arita N, Kamogawa J, Yamamoto H, Takubo N, Nakata S, Yamada<br />

K, Yamamoto S, Yoshie O and Nose M<br />

Accumulation of plasma cells expressing CXCR3 in the synovial sublining regions of early<br />

rheumatoid arthritis in association with production of Mig/CXCL9 by synovial fibroblasts.<br />

Clin Exp Immunol, 2005, 141: 363-371<br />

Tsukamoto Y, Usui M, Yamamoto G, Takagi Y, Tachikawa T, Yamamoto M, Nakamura M.<br />

Role of the junctional epithelium in periodontal innate defense and homeostasis.<br />

J Periodontal Res. 2012 May 15. doi: 10.1111/j.1600-0765.2012.01490.x. PubMed<br />

Tullet JMA, Pocock V, Steel JH, White R, Milligan S and Parker MG<br />

Multiple signaling defects in the absence of RIP140 impair both cumulus expansion and follicle<br />

rupture.<br />

Endocrinology, 2005, 146,9: 4127-4137<br />

Tung YC, Ma M, Piper S, Coll A, O'Rahilly S and Yeo GS<br />

Novel leptin-regulated genes revealed by transcriptional profiling of the hypothalamic<br />

paraventricular nucleus.<br />

J Neurosci, 2008, 28,47: 12419-12426<br />

Uchida K, Schneider S, Yochim JM, Kuramochi H, Hayashi K, Takasaki K, Yang D, Danenberg KD and<br />

Danenberg PV<br />

Intratumoral COX-2 gene expression is a predictive factor for colorectal cancer response to<br />

fluoropyrimidine-based chemotherapy.<br />

Clin Cancer Res, 2005, 11,9: 3363-3368<br />

Ukawala M, Chaudhari K, Rajyaguru T, Manjappa AS, Murthy RS, Gude R.<br />

Laminin receptor-targeted etoposide loaded polymeric micelles: a novel approach for the<br />

effective treatment of tumor metastasis.<br />

J Drug Target. 2012 Jan;20(1):55-66. PubMed PMID: 21967151. PubMed<br />

Ulrichs T, Lefmann M, Reich M, Morawietz L, Roth A, Brinkmann V, Kosmiadi GA, Seiler P, Aichele P, Hahn<br />

P, Krenn V, Göbel UB and Kaufmann SHE<br />

Modified immunohistological staining allows detection of Ziehl-Neelsen-negative<br />

Mycobacterium tuberculosis organims and their precise localization in human tissue.<br />

J Pathol, 2005, 205: 633-640<br />

October 2012 71/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Uneyama C, Shibutani M, Masutomi N, Takagi H and Hirose M<br />

Methacarn fixation for genomic DNA analysis in microdissected, paraffin-embedded tissue<br />

specimens.<br />

J Histochem Cytochem, 2002, 50: 1237-1245<br />

Vandewoestyne M, Van Nieuwerburgh F, Van Hoofstat D and Deforce D<br />

Evaluation of three DNA extraction protocols for forensic STR typing after laser capture<br />

microdissection.<br />

Forensic Sci Int Genet, 2011, in press<br />

Vandewoestyne M, Heindryckx B, Lepez T, Van Coster R, Gerris J, De Sutter P and Deforce D<br />

Polar body mutation load analysis in a patient with A3243G tRNALeu(UUR) point mutation.<br />

Mitochondrion, 2011, 11,4: 626-629<br />

Vandewoestyne M, Kumps C, Swerts K, Menten B, Lammens T, Philippé J, De Preter K, Laureys G, Van<br />

Roy N, Speleman F and Deforce D<br />

Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment<br />

risk assessment by array comparative genomic hybridization.<br />

Int J Cancer, 2011, in press<br />

Vandewoestyne ML, Pede VC, Lambein KY, Dhaenens MF, Offner FC, Praet MM, Philippé JJ, Kipps TJ and<br />

Deforce DL<br />

Laser microdissection for the assessment of the clonal relationship between chronic<br />

lymphocytic leukemia/small lymphocytic lymphoma and proliferating B cells within lymph<br />

node pseudofollicles.<br />

Leukemia, 2011, in press<br />

Vandewoestyne M and Deforce D<br />

Laser capture microdissection in forensic research: a review.<br />

Int J Legal Med, 2010, 124,6: 513-521<br />

Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />

Automatic detection of spermatozoa for laser capture microdissection.<br />

Int J Legal Med, 2009, 123,2: 169-175<br />

Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />

Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and<br />

laser microdissection for STR profiling of male cells in male/female mixtures.<br />

Int J Legal Med, 2009, 123,5: 441-447<br />

Van Oorschot RA, Ballantyne KN and Mitchell RJ<br />

Forensic trace DNA: a review.<br />

Investig Genet, 2010, 1,1:14<br />

Van Oterendorp C, Lorber B, Jovanovic Z, Yeo G, Lagrèze WA and Martin KR<br />

The expression of dynein light chain DYNLL1 (LC8-1) is persistently downregulated in<br />

glaucomatous rat retinal ganglion cells.<br />

Exp Eye Res, 2011, 92,2: 138-146<br />

van Veelen W, van Gasteren CJ, Acton DS, Franklin DS, Berger R, Lips CJ and Höppener JW<br />

Synergistic effect of oncogenic RET and loss of p18 on medullary thyroid carcinoma<br />

development.<br />

Cancer Res, 2008, 68,5: 1329-1337<br />

Varna M, Soliman H, Feugeas JP, Turpin E, Chapelin D, Legrès L, Plassa LF, de Roquancourt A, Espié M,<br />

Misset JL, Janin A, de Thé H and Bertheau P<br />

Changes in allelic imbalances in locally advanced breast cancers after chemotherapy.<br />

Br J Cancer, 2007, 97,8: 1157-1164<br />

Vellani V, Colucci M, Lattanzi R, Giannini E, Negri L, Melchiorri P and McNaughton PA<br />

Sensitization of transient receptor potential vanilloid 1 by the prokineticin receptor agonist<br />

Bv8.<br />

J Neurosci, 2006, 26,19: 5109-5116<br />

October 2012 72/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Vermaat JS, Nijman IJ, Koudijs MJ, Gerritse FL, Scherer SJ, Mokry M, Roessingh WM, Lansu N, de Bruijn<br />

E, van Hillegersberg R, van Diest PJ, Cuppen E, Voest EE.<br />

Primary colorectal cancers and their subsequent hepatic metastases are genetically different:<br />

implications for selection of patients for targeted treatment.<br />

Clin Cancer Res. 2012 Feb 1;18(3):688-99. PubMed<br />

Vikman S, Giandomenico V, Sommaggio R, Öberg K, Essand M and Tötterman TH<br />

CD8+ T cells against multiple tumor-associated antigens in peripheral blood of midgut<br />

carcinoid patients.<br />

Cancer Immunol Immunother, 2008, 57,3: 399-409<br />

Vilardell F and Iacobuzio-Donahue CA<br />

Cancer gene profiling in pancreatic cancer.<br />

Methods Mol Biol, 2010, 576: 279-292<br />

Viñas J and Piferrer F<br />

Stage-specific gene expression during fish spermatogenesis as determined by laser-capture<br />

microdissection and quantitative-PCR in Sea Bass (Dicentrarchus labrax) gonads.<br />

Biol Reprod, 2008, 79,4: 738-747<br />

Vincek V, Xu S and Fan YS<br />

Comparative genome hybridization analysis of laser-capture microdissected in situ melanoma.<br />

J Cutan Pathol, 2010, in press<br />

Vincek V, Nassiri M, Block N, Welsh CF, Nadji M and Morales AR<br />

Methodology for preservation of high molecular-weight RNA in paraffin-embedded tissue.<br />

Diagn Mol Pathol, 2005, 14,3: 127-133<br />

Vinck A, de Bekker C, Ossin A, Ohm RA, de Vries RP and Wösten HA<br />

Heterogenic expression of genes encoding secreted proteins at the periphery of Aspergillus<br />

niger colonies.<br />

Environ Microbiol, 2010, 13,1: 216-225<br />

Volante M, Papotti M, Roth J, Saremaslani P, Speel EJM, Lloyd RV, Carney A, Heitz PU, Bussolati G and<br />

Komminoth P<br />

Mixed medullary-follicular thyroid carcinoma. Molecular evidence for a dual origin of tumor<br />

components.<br />

Am J Pathol, 1999, 155: 1499-1509<br />

Volger OL, Fledderus JO, Kisters N, Fontijn RD, Moerland PD, Kuiper J, van Berkel TJ, Bijnens AP, Daemen<br />

MJ, Pannekoek H and Horrevoets AJ<br />

Distinctive expression of chemokines and transforming growth factor-ß signaling in human<br />

arterial endothelium during atherosclerosis.<br />

Am J Pathol, 2007, 171,1: 326-337<br />

Volkmann J, Müller D, Feuerstacke C, Kliesch S, Bergmann M, Mühlfeld C and Middendorff R<br />

Disturbed spermatogenesis associated with thickened lamina propria of seminiferous tubules<br />

is not caused by dedifferentiation of myofibroblasts.<br />

Hum Reprod, 2011, 26,6: 1450-61<br />

Vona G, Sabile A, Louha M, Sitruk V, Romana S, Schütze K, Capron F, Franco D, Pazzagli M, Vekemans<br />

M, Lacour B, Bréchot C and Paterlini-Bréchot P<br />

Isolation by size of epithelial tumor cells. A new method for the immunomorphological and<br />

molecular characterization of circulating tumor cells.<br />

Am J Pathol, 2000, 156,1: 57-63<br />

von Smolinski D, Blessenohl M, Neubauer C, Kalies K and Gebert A<br />

Validation of a novel ultra-short immunolabeling method for high-quality mRNA preservation<br />

in laser microdissection and real-time reverse transcriptase-polymerase chain reaction.<br />

J Mol Diagn, 2006, 8,2: 246-253<br />

Voo SS, Grimes HD, Lange BM.<br />

Cell type-specific transcriptome analysis of the soybean leaf paraveinal mesophyll layer.<br />

Plant Mol Biol Rep. 2012, DOI 10.1007/s11105-012-0494-7<br />

October 2012 73/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Voo SS, Grimes HD, Lange BM.<br />

Assessing the biosynthetic capabilities of secretory glands in Citrus peel.<br />

Plant Physiol. 2012 May;159(1):81-94. PubMed PMID: 22452856. PubMed<br />

Vortmeyer AO, Huang S, Lubensky I and Zhuang Z<br />

Non-islet origin of pancreatic islet cell tumors.<br />

J Clin Endocrinol Metab, 2004, 89,4: 1934-1938<br />

Voswinkel J, Assmann G, Held G, Pitann S, Gross WL, Holl-Ulrich K, Herlyn K and Mueller A<br />

Single cell analysis of B lymphocytes from Wegener's granulomatosis: B cell receptors display<br />

affinity maturation within the granulomatous lesions.<br />

Clin Exp Immunol, 2008, 154,3: 339-345<br />

Vozdova M, Kubickova S, Cernohorska H and Rubes J<br />

Detection of translocation rob(1;29) in bull sperm using a specific DNA probe.<br />

Cytogenet Genome Res, 2008, 120,1-2: 102-105<br />

Walch A, Specht K, Bink K, Zitzelsberger H, Braselmann H, Bauer M, Aubele M, Stein H, Siewert JR,<br />

Höfler H and Werner M<br />

Her-2/neu gene amplification, elevated mRNA expression, and protein overexpression in the<br />

metaplasia-dysplasia-adenocarcinoma sequence of Barrett’s esophagus.<br />

Lab Invest, 2001, 81,6: 791-801<br />

Walch A, Komminoth P, Hutzler P, Aubele M, Höfler H and Werner M<br />

Microdissection of tissue sections: Application to the molecular genetic characterization of<br />

premalignant lesions.<br />

Pathobiology, 2000, 68: 9-17<br />

Walch A, Zitzelsberger HF, Bruch J, Keller G, Angermeier D, Aubele MM, Mueller J, Stein H, Braselmann<br />

H, Siewert JR, Höfler H and Werner M<br />

Chromosomal imbalances in Barrett’s Adenocarcinoma and the Metaplasia-Dysplasia-<br />

Carcinoma sequence.<br />

Am J Pathol, 2000, 156,2: 555-566<br />

Waldmann J, Fendrich V, Holler J, Buchholz M, Heinmöller E, Langer P, Ramaswamy A, Samans B, Walz<br />

MK, Rothmund M, Bartsch DK and Slater EP<br />

Microarray analysis reveals differential expression of benign and malignant pheochromocytoma.<br />

Endocr Relat Cancer, 2010, 17,3: 743-756<br />

Wallinger S, Dietmaier W, Beyser K, Bocker T, Hofstadter F, Fishel R and Rüschoff J<br />

Aspirin supprimiert Mikrosatelliten-Instabilität.<br />

Verh Dtsch Ges Pathol, 1999, 83: 240-246<br />

Walter LM, Rogers PA and Girling JE<br />

Vascular endothelial growth factor-A isoform and (co)receptor expression are differentially<br />

regulated by 17ß-oestradiol in the ovariectomised mouse uterus.<br />

Reproduction, 2010, 140,2: 331-341<br />

Wang Y, Jia Y, Franken P, Smits R, Ewing PC, Lydon JP, DeMayo FJ, Burger CW, Anton Grootegoed J,<br />

Fodde R and Blok LJ<br />

Loss of APC function in mesenchymal cells surrounding the Müllerian duct leads to myometrial<br />

defects in adult mice.<br />

Mol Cell Endocrinol, 2011, 341,1-2: 48-54<br />

Wang G, Lai FM, Kwan BC, Lai KB, Chow KM, Li PK and Szeto CC<br />

Expression of ACE and ACE2 in patients with hypertensive nephrosclerosis.<br />

Kidney Blood Press Res, 2011, 34,3: 141-149<br />

Wang WZ, Oeschger FM, Lee S and Molnár Z<br />

High quality RNA from multiple brain regions simultaneously acquired by laser capture microdissection.<br />

BMC Mol Biol, 2009, 10: 69<br />

October 2012 74/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Wang B, Hurov K, Hofmann K and Elledge SJ<br />

NBA1, a new player in the Brca1 A complex, is required for DNA damage resistance and<br />

checkpoint control.<br />

Genes Dev, 2009, 23,6: 729-739<br />

Wang G, Lai FM, Lai KB, Chow KM, Kwan BC, Li KT and Szeto CC<br />

Intra-renal and urinary mRNA expression of podocyte-associated molecules for the estimation<br />

of glomerular podocyte loss.<br />

Ren Fail, 2010, 32,3: 372-379<br />

Wang G, Lai FM, Lai KB, Chow KM, Kwan CH, Li KT and Szeto CC<br />

Discrepancy between intrarenal messenger RNA and protein expression of ACE and ACE2 in<br />

human diabetic nephropathy.<br />

Am J Nephrol, 2009, 29,6: 524-531<br />

Wang H, Presland RB and Piepkorn M<br />

A search for CDKN2A/p16 INK4a mutations in melanocytic nevi from patients with melanoma<br />

and spouse controls by use of laser-captured microdissection.<br />

Arch Dermatol, 2005, 141: 177-180<br />

Watahiki J, Yamaguchi T, Enomoto A, Irie T, Yoshie K, Tachikawa T and Maki K<br />

Identification of differentially expressed genes in mandibular condylar and tibial growth<br />

cartilages using laser microdissection and fluorescent differential display: Chondromodulin-I<br />

(ChM-1) and tenomodulin (TeM) are differentially expressed in mandibular condylar and other<br />

growth cartilages.<br />

Bone, 2008, 42,6: 1053-1060<br />

Watari J, Moriichi K, Tanabe H, Kashima S, Nomura Y, Fujiya M, Tomita T, Oshima T, Fukui H, Miwa H,<br />

Das KM and Kohgo Y<br />

Biomarkers predicting development of metachronous gastric cancer after endoscopic<br />

resection: An analysis of molecular pathology of Helicobacter pylori eradication.<br />

Int J Cancer, 2011, in press<br />

Weber A, Hoffmann MM, Neumann HP, Erlic Z.<br />

Somatic mutation analysis of the SDHB, SDHC, SDHD, and RET genes in the clinical assessment<br />

of sporadic and hereditary pheochromocytoma.<br />

Horm Cancer. 2012 Aug;3(4):187-92. PubMed<br />

Weber S, Eckert D, Nettersheim D, Gillis AJ, Schäfer S, Kuckenberg P, Ehlermann J, Werling U, Biermann<br />

K, Looijenga LH and Schorle H<br />

Critical function of AP-2 gamma/TCFAP2C in mouse embryonic germ cell maintenance.<br />

Biol Reprod, 2010, 82,1: 214-223<br />

Weber A, Strehl A, Springer E, Hansen T, Schad A and Kirkpatrick CJ<br />

Biomaterial-induced sarcomagenesis is not associated with microsatellite instability.<br />

Virchows Arch, 2009, 454,2: 195-201<br />

Weber A, Wittekind C and Tannapfel A<br />

Genetic and epigenetic alterations of 9p21 gene products in benign and malignant tumors of<br />

the head and neck.<br />

Pathol Res Pract, 2003, 199: 391-397<br />

Weckermann D, Polzer B, Ragg T, Blana A, Schlimok G, Arnholdt H, Bertz S, Harzmann R and Klein CA<br />

Perioperative activation of disseminated tumor cells in bone marrow of patients with prostate<br />

cancer.<br />

J Clin Oncol, 2009, 27,10: 1549-1556<br />

Weiler NE, Matai AS and Sijen T<br />

Extended PCR conditions to reduce drop-out frequencies in low template STR typing including<br />

unequal mixtures.<br />

Forensic Sci Int Genet, 2012, 6,1: 102-107<br />

Werner M, Mattis A, Aubele M, Cummings M, Zitzelsberger H, Hutzler P and Höfler H<br />

20q13.2 amplification in intraductal hyperplasia adjacent to in situ and invasive ductal<br />

carcinoma of the breast.<br />

Virchows Arch, 1999, 435,5: 469-472<br />

October 2012 75/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Wernert N<br />

Lasermikrodissektion in der molekularen Onkologie des Prostatakarzinoms.<br />

Der Urologe, 2004, 43,6: 646-652<br />

Wernert N, Löcherbach C, Wellmann A, Behrens P and Hügel A<br />

Presence of genetic alterations in microdissected stroma of human colon and breast cancer.<br />

Anticancer Res, 2001, 21: 2259-2264<br />

Westbury CB, Reis-Filho JS, Dexter T, Mahler-Araujo B, Fenwick K, Iravani M, Grigoriadis A, Parry S,<br />

Robertson D, Mackay A, Ashworth A, Yarnold JR and Isacke CM<br />

Genome-wide transcriptomic profiling of microdissected human breast tissue reveals<br />

differential expression of KIT (c-Kit, CD117) and oestrogen receptor-α (ERα) in response to<br />

therapeutic radiation.<br />

J Pathol, 2009, 219,1: 131-140<br />

Wester K, Asplund A, Bäckvall H, Micke P, Derveniece A, Hartmane I, Malmström PU and Pontén F<br />

Zinc-based fixative improves preservation of genomic DNA and proteins in histoprocessing of<br />

human tissues.<br />

Lab Invest, 2003, 6: 889-899<br />

Westphal G, Burgemeister R, Friedemann G, Wellmann A, Wernert N, Wollscheid V, Becker B, Vogt T,<br />

Knüchel R, Stolz W and Schütze K<br />

Noncontact Laser Catapulting: A basic procedure for functional genomics and proteomics.<br />

Conn M (ed): Laser capture microscopy and microdissection, Methods in Enzymology, 2002, 356,<br />

Chapter 8: 80-99<br />

Wiebring A, Helmholz H, Sötje I, Lassen S, Prange A and Tiemann H<br />

A new method for the separation of different types of nematocysts from scyphozoa and<br />

investigation of proteinaceous toxins utilizing laser catapulting and subsequent mass<br />

spectrometry.<br />

Mar Biotechnol, 2010, 12,3: 308-317<br />

Wild PJ, Herr A, Wissmann C, Stoehr R, Rosenthal A, Zaak D, Simon R, Knuechel R, Pilarsky C and<br />

Hartmann A<br />

Gene expression profiling of progressive papillary noninvasive carcinomas of the urinary<br />

bladder.<br />

Clin Cancer Res, 2005, 11,12: 4415-4429<br />

Wild PJ, Reichle A, Andreesen R, Röcklein G, Dietmaier W, Rüschoff J, Blaszyk H, Hofstädter F and<br />

Hartmann A<br />

Microsatellite instability predicts poor short-term survival in patients with advanced breast<br />

cancer after high-dose chemotherapy and autologous stem-cell transplantation.<br />

Clin Cancer Res, 2004, 10,2: 556-564<br />

Wild P, Knuechel R, Dietmaier W, Hofstaedter F and Hartmann A<br />

Laser microdissection and microsatellite analyses of breast cancer reveal a high degree of<br />

tumor heterogeneity.<br />

Pathobiology, 2000, 68: 180-190<br />

Willer T, Prados B, Falcón-Pérez JM, Renner-Müller I, Przemeck GKH, Lommel M, Coloma A, Valero MC, de<br />

Angelis MH, Tanner W, Wolf E, Strahl S and Cruces J<br />

Targeted disruption of the Walker-Warburg syndrome gene Pomt1 in mouse results in<br />

embryonic lethality.<br />

Proc Natl Acad Sci, 2004, 101,39: 14126-14131<br />

Williamson KS, Richards LA, Perez-Osorio AC, Pitts B, McInnerney K, Stewart PS, Franklin MJ.<br />

Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome<br />

hibernation factors in the antibiotic tolerant subpopulation and hypoxia induced stress<br />

response in the metabolically active population.<br />

J Bacteriol. 2012 Feb 17. [Epub ahead of print] PubMed<br />

Wilson PM, El-Khoueiry A, Iqbal S, Fazzone W, LaBonte MJ, Groshen S, Yang D, Danenberg KD, Cole S,<br />

Kornacki M, Ladner RD and Lenz HJ<br />

A phase I/II trial of vorinostat in combination with 5-fluorouracil in patients with metastatic<br />

colorectal cancer who previously failed 5-FU-based chemotherapy.<br />

Cancer Chemother Pharmacol, 2010, 65,5: 979-988<br />

October 2012 76/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Wilson C, Idziaszczyk S, Parry L, Guy C, Griffiths DFR, Lazda E, Bayne RAL, Smith AJH, Sampson JR and<br />

Cheadle JP<br />

A mouse model of tuberous sclerosis 1 showing background specific early post-natal mortality<br />

and metastatic renal cell carcinoma.<br />

Hum Mol Genet, 2005, 14,13: 1839-1850<br />

Wise GE, He H, Gutierrez DL, Ring S and Yao S<br />

Requirement of alveolar bone formation for eruption of rat molars.<br />

Eur J Oral Sci, 2011, 119,5: 333-338<br />

Wise GE and Yao S<br />

Regional differences of expression of bone morphogenetic protein-2 and RANKL in the rat<br />

dental follicle.<br />

Eur J Oral Sci, 2006, 114: 512-516<br />

Wise GE, Yao S, Odgren PR and Pan F<br />

CSF-1 regulation of osteoclastogenesis for tooth eruption.<br />

J Dent Res, 2005, 84,9: 837-841<br />

Wise GE, Ding D and Yao S<br />

Regulation of secretion of osteoprotegerin in rat dental follicle cells.<br />

Eur J Oral Sci, 2004, 112: 439-444<br />

Wi niewski JR, Ostasiewicz P and Mann M<br />

High recovery FASP applied to the proteomic analysis of microdissected formalin fixed paraffin<br />

embedded cancer tissues retrieves known colon cancer markers.<br />

J Proteome Res. 2011, 10,7: 3040-3049<br />

Wobeser BK, Hill JE, Jackson ML, Kidney BA, Mayer MN, Townsend HG, Allen AL.<br />

Localization of Bovine papillomavirus in equine sarcoids and inflammatory skin<br />

conditions of horses using laser microdissection and two forms of DNA<br />

amplification.<br />

J Vet Diagn Invest. 2012 Jan;24(1):32-41. PubMed<br />

Woenckhaus M, Merk J, Stoehr R, Schaeper F, Gaumann A, Wiebe K, Hartmann A, Hofstaedter F and<br />

Dietmaier W.<br />

Prognostic value of FHIT, CTNNB1, and MUC1 expression in non-small cell lung cancer.<br />

Hum Pathol, 2008, 39,1: 126-136<br />

Woenckhaus M, Stoehr R, Dietmaier W, Wild PJ, Zieglmeier U, Foerster J, Merk J, Blaszyk H, Pfeifer M,<br />

Hofstaedter F and Hartmann A<br />

Microsatellite instability at chromosome 8p in non-small cell lung cancer is associated with<br />

lymph node metastasis and squamous differentiation.<br />

Int J Oncol, 2003, 23: 1357-1363<br />

Wolff M, Noreikat K, Ibanez-Tallon I, Lips KS, Kölle S, Kummer W.<br />

Cholinergic receptors in the murine oviduct: Inventory and coupling to intracellular calcium<br />

concentration.<br />

Life Sci. 2012 Mar 28. PubMed PMID: 22480510. PubMed<br />

Wolff J, Brendel C, Fink L, Bohle RM, Kissel K and Bux J<br />

Lack of NB1 GP (CD177/HNA-2a) gene transcription in NB1 GP - neutrophils from NB1 GPexpressing<br />

individuals and association of low expression with NB1 gene polymorphismus.<br />

Blood, 2003, 102,3: 731-733<br />

Wolloscheck T, Spiwoks-Becker I, Rickes O, Holthues H and Spessert R<br />

Phosphodiesterase10A: Abundance and circadian regulation in the retina and photoreceptor of<br />

the rat.<br />

Brain Res, 2011, 1376: 42-50<br />

Wong TS, Liu XB, Wong BY, Ng RW, Yuen AP and Wei WI<br />

Mature miR-184 as potential oncogenic microRNA of squamous cell carcinoma of tongue.<br />

Clin Cancer Res, 2008, 14,9: 2588-2592<br />

October 2012 77/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Wong TS, Liu XB, Ho AC, Yuen AP, Ng RW and Wei WI<br />

Identification of pyruvate kinase type M2 as potential oncoprotein in squamous cell carcinoma<br />

of tongue through microRNA profiling.<br />

Int J Cancer, 2008, 123,2: 251-257<br />

Woodruff PG, Dolganov GM, Ferrando RE, Donnelly S, Hays SR, Solberg OD, Carter R, Wong HH, Cadbury<br />

PS and Fahy JV<br />

Hyperplasia of smooth muscle in mild to moderate asthma without changes in cell size or gene<br />

expression.<br />

Am J Respir Crit Care Med, 2004, 169,9: 1001-1006<br />

Wu CH, Lee SC and Wang CW<br />

Viral protein targeting to the cortical endoplasmic reticulum is required for cell-cell spreading<br />

in plants.<br />

J Cell Biol, 2011, 193,3: 521-535<br />

Wu H<br />

Tumor-microenvironment interactions studied by zonal transcriptional profiling of squamous<br />

cell lung carcinoma.<br />

Thesis, 2010<br />

Wu Z, Nagano I, Kajita K, Nishina M and Takahashi Y<br />

Hypoglycaemia induced by Trichinella infection is due to the increase of glucose uptake in<br />

infected muscle cells.<br />

Int J Parasitol, 2009, 39,4: 427-434<br />

Xian W, Miron A, Roh M, Semmel DR, Yassin Y, Garber J, Oliva E, Goodman A, Mehra K, Berkowitz RS,<br />

Crum CP and Quade BJ<br />

The Li-Fraumeni syndrome (LFS): a model for the initiation of p53 signatures in the distal<br />

Fallopian tube.<br />

J Pathol, 2010, 220,1: 17-23<br />

Xiao Y, Karnati S, Qian G, Nenicu A, Fan W, Tchatalbachev S, Höland A, Hossain H, Guillou F, Lüers GH,<br />

Baumgart-Vogt E.<br />

Cre-mediated stress affects sirtuin expression levels, peroxisome biogenesis and metabolism,<br />

antioxidant and proinflammatory signaling pathways.<br />

PLoS One. 2012;7(7):e41097. PubMed<br />

Xie Y, Xiao G, Coombes KR, Behrens C, Solis LM, Raso G, Girard L, Erickson HS, Roth J, Heymach JV,<br />

Moran C, Danenberg K, Minna JD and Wistuba II<br />

Robust gene expression signature from formalin-fixed paraffin-embedded samples predicts<br />

prognosis of non-small-cell lung cancer patients.<br />

Clin Cancer Res, 2011, 17,17: 5705-5714<br />

Yachida S, Vakiani E, White CM, Zhong Y, Saunders T, Morgan R, de Wilde RF, Maitra A, Hicks J, Demarzo<br />

AM, Shi C, Sharma R, Laheru D, Edil BH, Wolfgang CL, Schulick RD, Hruban RH, Tang LH, Klimstra DS,<br />

Iacobuzio-Donahue CA.<br />

Small cell and large cell neuroendocrine carcinomas of the pancreas are genetically similar and<br />

distinct from well-differentiated pancreatic neuroendocrine tumors.<br />

Am J Surg Pathol. 2012 Feb;36(2):173-84. PubMed<br />

Yamada Y, Hata K, Hirose Y, Hara A, Sugie S, Kuno T, Yoshimi N, Tanaka T and Mori H<br />

Microadenomatous lesions involving loss of Apc heterozygosity in the colon of adult Apc Min/+<br />

mice.<br />

Cancer Res, 2002, 62: 6367-6370<br />

Yamamoto G, Irie T, Aida T, Nagoshi Y, Tsuchiya R and Tachikawa T<br />

Correlation of invasion and metastasis of cancer cells, and expression of the RAD21 gene in<br />

oral squamous cell carcinoma.<br />

Virchows Arch, 2006, 448,4: 435-441<br />

Yamamoto M, Cui L, Johkura K, Asanuma K, Okouchi Y, Ogiwara N and Sasaki K<br />

Branching ducts similar to mesonephric ducts or ureteric buds in teratomas originating from<br />

mouse embryonic stem cells.<br />

Am J Physiol Renal Physiol, 2005, 290,1: F56-60<br />

October 2012 78/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Yanaihara A, Otsuka Y, Iwasaki S, Koide K, Aida T and Okai T<br />

Comparison in gene expression of secretory human endometrium using laser microdissection.<br />

Reprod Biol Endocrinol, 2004, 2,1: 66<br />

Yang F, Zhang X, Maiseyeu A, Mihai G, Yasmeen R, DiSilvestro D, Maurya SK, Periasamy M, Bergdall KV,<br />

Gregg D, Sen CK, Roy S, Lee LJ, Rajagopalan S, Ziouzenkova O.<br />

The prolonged survival of fibroblasts with forced lipid catabolism in visceral fat following<br />

encapsulation in alginate-poly-L-lysine.<br />

Biomaterials. 2012 Aug;33(22):5638-49. PubMed<br />

Yao VJ, Ozawa MG, Trepel M, Arap W, McDonald DM and Pasqualini R<br />

Targeting pancreatic islets with phage display assisted by laser pressure catapult<br />

microdissection.<br />

Am J Pathol, 2005, 166,2: 625-636<br />

Yeats TH, Howe KJ, Matas AJ, Buda GJ, Thannhauser TW and Rose JK<br />

Mining the surface proteome of tomato (Solanum lycopersicum) fruit for proteins associated<br />

with cuticle biogenesis.<br />

J Exp Bot, 2010, 61,13: 3759-3771<br />

Yim PD, Gallos G, Xu D, Zhang Y and Emala CW<br />

Novel expression of a functional glycine receptor chloride channel that attenuates contraction<br />

in airway smooth muscle.<br />

FASEB J, 2011, 25,5: 1706-1717<br />

Yin J, Zhang Y, Bai Y, Wang B and Yang K<br />

Expression patterns of homeobox genes in different teeth of the minipig embryo.<br />

African Journal of Biotechnology, 2011, 10,31: 5831-5837<br />

Yin Q, Brody AR and Sullivan DE<br />

Laser capture microdissection reveals dose-response of gene expression in situ consequent to<br />

asbestos exposure.<br />

Int J Exp Pathol, 2007, 88,6: 415-425<br />

Yoneda K, Tomimoto A, Endo H, Iida H, Sugiyama M, Takahashi H, Mawatari H, Nozaki Y, Fujita K,<br />

Yoneda M, Inamori M, Nakajima N, Wada K, Nagashima Y, Nakagama H, Uozaki H, Fukayama M and<br />

Nakajima A<br />

Expression of adiponectin receptors, AdipoR1 and AdipoR2, in normal colon epithelium and<br />

colon cancer tissue.<br />

Oncol Rep, 2008, 20,3: 479-483<br />

You H, Zhang W, Jones MK, Gobert GN, Mulvenna J, Rees G, Spanevello M, Blair D, Duke M, Brehm K and<br />

McManus DP<br />

Cloning and characterisation of Schistosoma japonicum insulin receptors.<br />

PLoS One, 2010, 5,3: e9868<br />

Yu J, Li A, Hong SM, Hruban RH and Goggins M<br />

MicroRNA alterations of pancreatic intraepithelial neoplasms (PanINs).<br />

Clin Cancer Res, 2011, in press<br />

Yu Y, Lashbrook CC and Hannapel DJ<br />

Tissue integrity and RNA quality of laser microdissected phloem of potato.<br />

Planta, 2007, 226,3: 797-803<br />

Zacchigna S, Pattarini L, Zentilin L, Moimas S, Carrer A, Sinigaglia M, Arsic N, Tafuro S, Sinagra G and<br />

Giacca M<br />

Bone marrow cells recruited through the neuropilin-1 receptor promote arterial formation at<br />

the sites of adult neoangiogenesis in mice.<br />

J Clin Invest, 2008, 118,6: 2062-2075<br />

Zahner G, Schaper M, Panzer U, Kluger M, Stahl RA, Thaiss F and Schneider A<br />

Prostaglandin EP2 and EP4 receptors modulate expression of the chemokine CCL2 (MCP-1) in<br />

response to LPS-induced renal glomerular inflammation.<br />

Biochem J, 2009, 422,3: 563-570<br />

October 2012 79/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Zeiffer U, Schober A, Lietz M, Liehn EA, Erl W, Emans N, Zhong-qum Y and Weber C<br />

Neointimal smooth muscle cells display a proinflammatory phenotype resulting in increased<br />

leukocyte recruitment mediated by P-selectin and chemokines.<br />

Circ Res, 2004, 94: 776-784<br />

Zeng J and Howard JC<br />

Spontaneous focal activation of invariant natural killer T cells (iNKT cells) in mouse liver and<br />

kidney.<br />

BMC Biol, 2010, 8: 142<br />

Zhang X, Douglas RN, Strable J, Lee M, Buckner B, Janick-Buckner D, Schnable PS, Timmermans MC,<br />

Scanlon M.<br />

PUNCTATE VASCULAR EXPRESSION1 (PVE1) is a novel maize gene required for leaf pattern<br />

formation that functions downstream of the ta-siARF pathway.<br />

Plant Physiol. 2012 PubMed PMID: 22669891. PubMed<br />

Zhang X, Wang Y, Yamamoto G and Tachikawa T<br />

Expression of matrix metalloproteinases MMP-2, MMP-9 and their tissue inhibitors TIMP-1 and<br />

TIMP-2 in the epithelium and stroma of salivary gland pleomorphic adenomas.<br />

Histopathology, 2009, 55,3: 250-260<br />

Zhang X, Madi S, Borsuk L, Nettleton D, Elshire RJ, Buckner B, Janick-Buckner D, Beck J, Timmermans M,<br />

Schnable PS and Scanlon MJ<br />

Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the<br />

shoot apical meristem.<br />

PLoS Genet, 2007, 3,6: e101<br />

Zheng Z, Andersson AF, Ye W, Nyrén O, Normark S and Engstrand L<br />

A method for metagenomics of Helicobacter pylori from archived formalin-fixed gastric<br />

biopsies permitting longitudinal studies of carcinogenic risk.<br />

PLoS One, 2011, 6,10: e26442<br />

Zhao WL, Daneshpouy ME, Mounier N, Brière J, Leboeuf C, Plassa LF, Turpin E, Cayuela JM, Ameisen JC,<br />

Gisselbrecht C and Janin A<br />

Prognostic significance of bcl-xL gene expression and apoptotic cell counts in follicular<br />

lymphoma.<br />

Blood, 2004, 103,2: 695-697<br />

Zhao WL, Mourah S, Mounier N, Leboeuf C, Daneshpouy ME, Legrès L, Meignin V, Oksenhendler E, Le<br />

Maignin C, Calvo F, Brière J, Gisselbrecht C and Janin A<br />

Vascular endothelial growth factor-A is expressed both on lymphoma cells and endothelial<br />

cells in angioimmunoblastic T-cell lymphoma and related to lymphoma progression.<br />

Lab Invest, 2004, 84,11: 1512-1519<br />

Zheng Z<br />

Molecular epidemiologic studies on Helicobacter pylori infection and stomach cancer risk.<br />

Thesis, 2011: 1-58<br />

Zheng PP, Sieuwerts AM, Luider TM, van der Weiden M, Sillevis-Smitt PAE and Kros JM<br />

Differential expression of splicing variants of the human caldesmon gene (CALD1) in glioma<br />

neovascularization versus normal brain microvasculature.<br />

Am J Pathol, 2004, 164: 2217-2228<br />

Zhong XY, Holzgreve W and Hahn S<br />

Laser-mediated micromanipulation systems: An important tool for the analysis of single cells.<br />

Hahn S and Holzgreve W (eds): Fetal cells and fetal DNA in maternal blood. New Developments for a new<br />

millennium. 11 th Fetal Cell Workshop, Basel 2000. Basel, Karger, 2001: 16-20<br />

Zhou T, Wang S, Ren H, Qi XR, Luchetti S, Kamphuis W, Zhou JN, Wang G and Swaab DF<br />

Dendritic cell nuclear protein-1, a novel depression-related protein, upregulates corticotropinreleasing<br />

hormone expression.<br />

Brain, 2010, 133,10: 3069-3079<br />

October 2012 80/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Zhou W, Muggerud A, Vu P, Due EU, Sørlie T, Børresen-Dale AL, Wärnberg F and Langerød A<br />

Full sequencing of TP53 identifies identical mutations within in situ and invasive components<br />

in breast cancer suggesting clonal evolution.<br />

Mol Oncol, 2009, 3: 214-219<br />

Zhou M, Li XM and Lavker RM<br />

Transcriptional profiling of enriched populations of stem cells versus transient amplifying<br />

cells: a comparison of limbal and corneal epithelial basal cells.<br />

J Biol Chem, 2006, 281,28: 19600-19609<br />

Zhu P, Tan MJ, Huang RL, Tan CK, Chong HC, Pal M, Lam CR, Boukamp P, Pan JY, Tan SH, Kersten S, Li<br />

HY, Ding JL and Tan NS<br />

Angiopoietin-like 4 protein elevates the prosurvival intracellular O 2 - : H2O 2 ratio and confers<br />

anoikis resistance to tumors.<br />

Cancer Cell, 2011, 19,3: 401-415<br />

Ziegler AN, Schneider JS, Qin M, Tyler WA, Pintar JE, Fraidenraich D, Wood TL, Levison SW.<br />

IGF-II promotes stemness of neural restricted precursors.<br />

Stem Cells. 2012 Jun;30(6):1265-76. doi: 10.1002/stem.1095. PubMed PMID: 22593020. PubMed<br />

Ziegler L, Segal-Ruder Y, Coppola G, Reis A, Geschwind D, Fainzilber M and Goldstein RS<br />

A human neuron injury model for molecular studies of axonal regeneration.<br />

Exp Neurol, 2010, 223,1: 119-127<br />

Zitzelsberger H, Kulka U, Lehmann L, Walch A, Smida J, Aubele M, Lorch T, Höfler H, Bauchinger M and<br />

Werner M<br />

Genetic heterogeneity in a prostatic carcinoma and associated prostatic intraepithelial<br />

neoplasia as demonstrated by combined use of laser-microdissection, degenerate<br />

oligonucleotide primed PCR and comparative genomic hybridization.<br />

Virchows Arch, 1998, 433,4: 297-304<br />

1.2 Array Applications<br />

Aleksic K, Lackner C, Geigl JB, Schwarz M, Auer M, Ulz P, Fischer M, Trajanoski Z, Otte M and Speicher<br />

MR<br />

Evolution of genomic instability in diethylnitrosamine-induced hepatocarcinogenesis in mice.<br />

Hepatology, 2011, 53,3: 895-904<br />

Alvarez H, Corvalan A, Roa JC, Argani P, Murillo F, Edwards J, Beaty R, Feldmann G, Hong SM,<br />

Mullendore M, Roa I, Ibañez L, Pimentel F, Diaz A, Riggins GJ and Maitra A<br />

Serial analysis of gene expression identifies connective tissue growth factor expression as a<br />

prognostic biomarker in gallbladder cancer.<br />

Clin Cancer Res, 2008, 14,9: 2631-2638<br />

Andrade VP, Ostrovnaya I, Seshan VE, Morrogh M, Giri D, Olvera N, De Brot M, Morrow M, Begg CB, King<br />

TA.<br />

Clonal relatedness between lobular carcinoma in situ and synchronous malignant lesions.<br />

Breast Cancer Res. 2012 Jul 9;14(4):R103. PubMed<br />

Arai C, Nomura Y, Ishikawa M, Noda K, Choi JW, Yashiro Y, Hanada N and Nakamura Y<br />

HSPA1A is upregulated in periodontal ligament at early stage of tooth movement in rats.<br />

Histochem Cell Biol, 2010, 134,4: 337-343<br />

Asplund A, Gry Björklund M, Sundquist C, Strömberg S, Edlund K, Östman A, Nilsson P, Pontén F and<br />

Lundeberg J<br />

Expression profiling of microdissected cell populations selected from basal cells in normal<br />

epidermis and basal cell carcinoma.<br />

Br J Dermatol, 2008, 158,3: 527-538<br />

October 2012 81/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Baelde HJ, Eikmans M, Lappin DW, Doran PP, Hohenadel D, Brinkkoetter PT, van der Woude FJ, Waldherr<br />

R, Rabelink TJ, de Heer E and Bruijn JA<br />

Reduction of VEGF-A and CTGF expression in diabetic nephropathy is associated with podocyte<br />

loss.<br />

Kidney Int, 2007, 71,7: 637-645<br />

Bandapalli OR, Macher-Goeppinger S, Schirmacher P, Brand K.<br />

Paracrine signalling in colorectal liver metastases involving tumor cell-derived PDGF-C and<br />

hepatic stellate cell-derived PAK-2.<br />

Clin Exp Metastasis. 2012 Jun;29(5):409-17. PubMed PMID: 22362252. PubMed<br />

Bhanot U, Köhntop R, Hasel C and Möller P<br />

Evidence of Notch pathway activation in the ectatic ducts of chronic pancreatitis.<br />

J Pathol, 2008, 214,3: 312-319<br />

Becker B, Roesch A, Hafner C, Stolz W, Dugas M, Landthaler M and Vogt T<br />

Discrimination of melanocytic tumors by cDNA array hybridization of tissues prepared by Laser<br />

Pressure Catapulting.<br />

J Invest Dermatol, 2004, 122,2: 361-368<br />

Beer M, Doepping S, Hildner M, Weber G, Grabner R, Hu D, Mohanta SK, Srikakulapu P, Weih F and<br />

Habenicht AJ<br />

Laser-capture microdissection of hyperlipidemic/ApoE⁻/⁻ mouse aorta atherosclerosis.<br />

Methods Mol Biol, 2011, 755: 417-428<br />

Benchekroun M, DeGraw J, Gao J, Sun L, v Boguslawsky K, Leminen A, Andersson LC and Heiskala M<br />

Impact of fixative on recovery of mRNA from paraffin-embedded tissue.<br />

Diagn Mol Pathol, 2004, 13,2: 116-125<br />

Bentzon DN, Mortensen MM, Ørntoft T, Dyrskjøt L, Borre M.<br />

Expression profiling of hereditary versus sporadic prostate cancer suggests CYR61, EGR3,<br />

KLF6 and SNF1LK as differentially expressed genes.<br />

J Urol. 2012,2,55-66. doi:10.4236/oju.2012.22010<br />

Blalock EM, Buechel HM, Popovic J, Geddes JW and Landfield PW<br />

Microarray analyses of laser-captured hippocampus reveal distinct gray and white matter<br />

signatures associated with incipient Alzheimer's disease.<br />

J Chem Neuroanat, 2011, 42,2: 118-126.<br />

Bochmann L, Sarathchandra P, Mori F, Lara-Pezzi E, Lazzaro D and Rosenthal N<br />

Revealing new mouse epicardial cell markers through transcriptomics.<br />

PLoS One, 2010, 5,6: e11429<br />

Boelens MC, Gustafson AM, Postma DS, Kok K, van der Vries G, van der Vlies P, Spira A, Lenburg ME,<br />

Geerlings M, Sietsma H, Timens W, van den Berg A and Groen HJ<br />

A chronic obstructive pulmonary disease related signature in squamous cell lung cancer.<br />

Lung Cancer, 2011, 72,2: 177-183<br />

Boelens MC, Te Meerman GJ, Gibcus JH, Blokzijl T, Boezen HM, Timens W, Postma DS, Groen HJ and van<br />

den Berg A<br />

Microarray amplification bias: loss of 30% differentially expressed genes due to long probe -<br />

poly(A)-tail distances.<br />

BMC Genomics, 2007, 8,1: 277<br />

Booij JC, ten Brink J, Swagemakers S, Verkerk A, Essing AH, van der Spek PJ and Bergen AA<br />

A new strategy to identify and annotate human RPE-specific gene expression.<br />

PLoS One, 2010, 5,3: e9341<br />

Boyd LK, Mao X, Xue L, Lin D, Chaplin T, Kudahetti SC, Stankiewicz E, Yu Y, Beltran L, Shaw G, Hines J,<br />

Oliver RT, Berney DM, Young BD, Lu YJ.<br />

High-resolution genome-wide copy-number analysis suggests a monoclonal origin of<br />

multifocal prostate cancer.<br />

Genes Chromosomes Cancer. 2012 Feb 15. doi: 10.1002/gcc.21944. PubMed<br />

October 2012 82/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Brinch M, Hatt L, Singh R, Møller K, Sommer S, Uldbjerg N, Christensen B, Kølvraa S.<br />

Identification of circulating fetal cell markers by microarray analysis.<br />

Prenat Diagn. 2012 Aug;32(8):742-51. doi: 10.1002/pd.3894 PubMed<br />

Buchner A, Castro M, Hennig A, Popp T, Assmann G, Stief CG and Zimmermann W<br />

Downregulation of HNF-1B in renal cell carcinoma is associated with tumor progression and<br />

poor prognosis.<br />

Urology, 2010, 76,2: 507<br />

Buchner A, Castro M, Hennig A, Popp T, Assmann G, Hofstetter A, Stief C and Zimmermann W<br />

Transcriptome analyses in renal cell carcinoma : Combination of laser microdissection and<br />

microarrays.<br />

Urologe A, 2007, 46,9: 1170-1175<br />

Caiazzo M, Dell'Anno MT, Dvoretskova E, Lazarevic D, Taverna S, Leo D, Sotnikova TD, Menegon A,<br />

Roncaglia P, Colciago G, Russo G, Carninci P, Pezzoli G, Gainetdinov RR, Gustincich S, Dityatev A,<br />

Broccoli V.<br />

Direct generation of functional dopaminergic neurons from mouse and human fibroblasts.<br />

Nature. 2011 Jul 3;476(7359):224-7. doi: 10.1038/nature10284. PubMed<br />

Chand AL, Murray AS, Jones RL, Hannan NJ, Salamonsen LA and Rombauts L<br />

Laser capture microdissection and cDNA array analysis of endometrium identify CCL16 and<br />

CCL21 as epithelial-derived inflammatory mediators associated with endometriosis.<br />

Reprod Biol Endocrinol, 2007, 5: 18<br />

Chevronnay HPG, Lemoine P, Courtoy PJ, Marbaix E and Henriet P<br />

Ovarian steroids, mitogen-activated protein kinases, and/or aspartic proteinases cooperate to<br />

control endometrial remodeling by regulating gene expression in the stroma and glands.<br />

Endocrinology, 2010, 151,9: 4515-4526<br />

Chevronnay HPG, Galant C, Lemoine P, Courtoy PJ, Marbaix E and Henriet P<br />

Spatiotemporal coupling of focal extracellular matrix degradation and reconstruction in the<br />

menstrual human endometrium.<br />

Endocrinology, 2009, 150,11: 5094-5105<br />

Chevronnay GHP, Cornet PB, Delvaux D, Lemoine P, Courtoy PJ, Henriet P and Marbaix E<br />

Opposite regulation of transforming growth factors-beta2 and -beta3 expression in the human<br />

endometrium.<br />

Endocrinology, 2008, 149,3: 1015-1025<br />

Choolani M, Mahyuddin AP, Hahn S.<br />

The promise of fetal cells in maternal blood.<br />

Best Pract Res Clin Obstet Gynaecol. 2012 Oct;26(5):655-67. PubMed<br />

Christensen B, Kolvraa S, Eckelt A, Brinch M, Singh R and Hatt L.<br />

Enrichment and identification of fetal cells in maternal blood and ligands for such use.<br />

United States Patent Application Publication, 2012, PCT/DK10/50002<br />

Clements SE, Techanukul T, Lai-Cheong JE, Mee JB, South AP, Pourreyron C, Burrows NP, Mellerio JE,<br />

McGrath JA.<br />

Mutations in AEC syndrome skin reveal a role for p63 in basement membrane adhesion, skin<br />

barrier integrity and hair follicle biology.<br />

Br J Dermatol. 2012 Feb 13. doi: 10.1111/j.1365-2133.2012.10888.x. PubMed<br />

Dahse R, Berndt A and Kosmehl H<br />

Total RNA-based target design for microarray analysis of defined tumor areas.<br />

BioTechniques, 2002, 32,4: 744-748<br />

Damiani I, Baldacci-Cresp F, Hopkins J, Andrio E, Balzergue S, Lecomte P, Puppo A, Abad P, Favery B,<br />

Hérouart D.<br />

Plant genes involved in harbouring symbiotic rhizobia or pathogenic nematodes.<br />

New Phytol. 2012 Apr;194(2):511-22. doi: 10.1111/j.1469-8137.2011.04046.x. PubMed<br />

October 2012 83/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Datson NA, Speksnijder N, Mayer JL, Steenbergen PJ, Korobko O, Goeman J, de Kloet ER, Joëls M,<br />

Lucassen PJ.<br />

The transcriptional response to chronic stress and glucocorticoid receptor blockade in the<br />

hippocampal dentate gyrus.<br />

Hippocampus. 2012 Feb;22(2):359-71. doi: 10.1002/hipo.20905. PubMed<br />

Datson NA, Speksnijder N, de Jong IE, Steenbergen PJ, Vielsted Christensen K, Potempa K, Torleif<br />

Pedersen J, Egebjerg J, Kallunki P, Nielsen EB, de Kloet ER and Didriksen M<br />

Hippocampal CA1 region shows differential regulation of gene expression in mice displaying<br />

extremes in behavioral sensitization to amphetamine: relevance for psychosis susceptibility?<br />

Psychopharmacology, 2011: in press<br />

Datson NA, Morsink M, Steenbergen PJ, Aubert Y, Schlumbohm C, Fuchs E and de Kloet ER<br />

A molecular blueprint of gene expression in hippocampal subregions CA1, CA3, and DG is<br />

conserved in the brain of the common marmoset.<br />

Hippocampus, 2009, 19,8: 739-752<br />

Deeken R, Ache P, Kajahn I, Klinkenberg J, Bringmann G and Hedrich R<br />

Identification of Arabidopsis thaliana phloem RNAs provides a search criterion for phloembased<br />

transcripts hidden in complex datasets of microarray experiments.<br />

Plant J, 2008, 55,5: 746-759<br />

Dreja T, Jovanovic Z, Rasche A, Kluge R, Herwig R, Tung Y, Joost HG, Yeo GS and Al-Hasani H<br />

Diet-induced gene expression of isolated pancreatic islets from a polygenic mouse model of<br />

the metabolic syndrome.<br />

Diabetologia, 2010, 53,2: 309-320<br />

Edlund K, Lindskog C, Saito A, Berglund A, Pontén F, Göransson-Kultima H, Isaksson A, Jirström K,<br />

Planck M, Johansson L, Lambe M, Holmberg L, Nyberg F, Ekman S, Bergqvist M, Landelius P, Lamberg K,<br />

Botling J, Ostman A, Micke P.<br />

CD99 is a novel prognostic stromal marker in non-small cell lung cancer.<br />

Int J Cancer. 2012 Mar 6. doi: 10.1002/ijc.27518. PubMed<br />

Ehrchen JM, Roebrock K, Foell D, Nippe N, von Stebut E, Weiss JM, Münck NA, Viemann D, Varga G,<br />

Müller-Tidow C, Schuberth HJ, Roth J and Sunderkötter C<br />

Keratinocytes determine Th1 immunity during early experimental leishmaniasis.<br />

PLoS Pathog, 2010, 29;6: e1000871<br />

Eisenberger S, Ackermann K, Voggenreiter G, Sültmann H, Kasperk C and Pyerin W<br />

Metastases and multiple myeloma generate distinct transcriptional footprints in osteocytes in<br />

vivo.<br />

J Pathol, 2008, 214,5: 617-626<br />

Eisenberger S, Hoppe G, Pyerin W and Ackermann K<br />

High-quality RNA preparation for transcript profiling of osteocytes from native human bone<br />

microdissections.<br />

Anal Biochem, 2004, 335,2: 260-266<br />

Ernst T, Hergenhahn M, Kenzelmann M, Cohen CD, Bonrouhi M, Weninger A, Klären R, Gröne EF, Wiesel<br />

M, Güdemann C, Küster J, Schott W, Staehler G, Kretzler M , Hollstein M and Gröne HJ<br />

Decrease and gain of gene expression are equally discriminatory markers for prostate<br />

carcinoma.<br />

Am J Pathol, 2002, 160,6: 2169-2180<br />

Evans J, Kaitu'u-Lino T and Salamonsen LA<br />

Extracellular matrix dynamics in scar-free endometrial repair: perspectives from mouse in vivo<br />

and human in vitro studies.<br />

Biol Reprod, 2011, 85,3: 511-523<br />

Evert M, Schneider-Stock R and Dombrowski F<br />

Overexpression of fatty acid synthase in chemically and hormonally induced hepatocarcinogenesis<br />

of the rat.<br />

Lab Invest, 2005, 85,1: 99-108<br />

October 2012 84/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Fackler MJ, Umbricht CB, Williams D, Argani P, Cruz LA, Merino VF, Teo WW, Zhang Z, Huang P,<br />

Visvananthan K, Marks J, Ethier S, Gray JW, Wolff AC, Cope LM and Sukumar S<br />

Genome-wide methylation analysis identifies genes specific to breast cancer hormone receptor<br />

status and risk of recurrence.<br />

Cancer Res, 2011, 71,19: 6195-6207<br />

Feng Y, Johansson J, Shao R, Mannerås Holm L, Billig H, Stener-Victorin E.<br />

Electrical and manual acupuncture stimulation affects estrous cyclicity and neuroendocrine<br />

function in a DHT-induced rat polycystic ovary syndrome model.<br />

Exp Physiol. 2012 Feb 24. PubMed<br />

Fink L, Kohlhoff S, Stein MM, Hanze J, Weissmann N, Rose F, Akkayagil E, Manz D, Grimminger F, Seeger<br />

W and Bohle RM<br />

cDNA array hybridization after laser-assisted microdissection from nonneoplastic tissue.<br />

Am J Pathol, 2002, 160,1: 81-90<br />

Fritzsche S, Kenzelmann M, Hoffmann MJ, Müller M, Engers R, Gröne HJ and Schulz WA<br />

Concomitant down-regulation of SPRY1 and SPRY2 in prostate carcinoma.<br />

Endocrinol, 2006, 13,3: 839-849<br />

Fujita T, Firth JD, Kittaka M, Ekuni D, Kurihara H, Putnins EE.<br />

Loss of claudin-1 in lipopolysaccharide-treated periodontal epithelium.<br />

J Periodontal Res. 2012 Apr;47(2):222-7. doi: 10.1111/j.1600-0765.2011.01424.x. PubMed<br />

Funke B, Lasitschka F, Roth W, Penzel R, Meuer S, Saile M, Gretz N, Sido B, Schirmacher P and<br />

Autschbach F<br />

Selective downregulation of retinoic acid-inducible gene I within the intestinal epithelial<br />

compartment in Crohn's disease.<br />

Inflamm Bowel Dis, 2011, 17,9: 1943-1954<br />

Funke B<br />

Laser microdissection of intestinal epithelial cells and downstream analysis.<br />

Methods Mol Biol, 2011, 755: 189-196<br />

Funke B, Autschbach F, Kim S, Lasitschka F, Strauch U, Rogler G, Gdynia G, Li L, Gretz N, Macher-<br />

Goeppinger S, Sido B, Schirmacher P, Meuer SC and Roth W<br />

Functional characterization of decoy receptor 3 in Crohn's disease.<br />

Gut, 2009, 58,4: 483-491<br />

Gaude N, Bortfeld S, Duensing N, Lohse M and Krajinski F<br />

Arbuscule-containing and non-colonized cortical cells of mycorrhizal roots undergo extensive<br />

and specific reprogramming during arbuscular mycorrhizal development.<br />

Plant J, 2011, in press, doi: 10.1111/j.1365-313X.2011.04810.x<br />

Gava N, L Clarke C, Bye C, Byth K and Defazio A<br />

Global gene expression profiles of ovarian surface epithelial cells in vivo.<br />

J Mol Endocrinol, 2008, 40,6: 281-296<br />

George MD, Wehkamp J, Kays RJ, Leutenegger CM, Sabir S, Grishina I, Dandekar S and Bevins CL<br />

In vivo gene expression profiling of human intestinal epithelial cells: analysis by laser microdissection<br />

of formalin fixed tissues.<br />

BMC Genomics, 2008, 9: 209<br />

Giger T, Khaitovich P, Somel M, Lorenc A, Lizano E, Harris LW, Ryan MM, Lan M, Wayland MT, Bahn S and<br />

Pääbo S<br />

Evolution of neuronal and endothelial transcriptomes in primates.<br />

Genome Biol Evol, 2010, 2: 284-292<br />

Gobert GN, McManus DP, Nawaratna S, Moertel L, Mulvenna J and Jones MK<br />

Tissue specific profiling of females of schistosoma japonicum by integrated laser microdissection<br />

microscopy and microarray analysis.<br />

PLoS Negl Trop Dis, 2009, 3,6: e469<br />

October 2012 85/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, Save V, O'Donovan M, Eijk PP, Alderson D, Ylstra B,<br />

Caldas C and Fitzgerald RC<br />

Integrative analysis of array-comparative genomic hybridisation and matched gene expression<br />

profiling data reveals novel genes with prognostic significance in oesophageal<br />

adenocarcinoma.<br />

Gut, 2011, 60,10: 1317-1326<br />

Göransson H, Edlund K, Rydåker M, Rasmussen M, Winquist J, Ekman S, Bergqvist M, Thomas A, Lambe<br />

M, Rosenquist R, Holmberg L, Micke P, Botling J and Isaksson A<br />

Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer<br />

samples using SNP array data.<br />

PLoS One, 2009, 4,6: e6057<br />

Gomez SK, Javot H, Deewatthanawong P, Torres-Jerez I, Tang Y, Blancaflor E, Udvardi M and Harrison M<br />

Medicago truncatula and Glomus intraradices gene expression in cortical cells harboring<br />

arbuscules in the arbuscular mycorrhizal symbiosis.<br />

BMC Plant Biol, 2009, 9: 10<br />

Grab DJ, Garcia-Garcia JC, Nikolskaia OV, Kim YV, Brown A, Pardo CA, Zhang Y, Becker KG, Wilson BA,<br />

de A Lima AP, Scharfstein J and Dumler JS<br />

Protease activated receptor signaling is required for african trypanosome traversal of human<br />

brain microvascular endothelial cells.<br />

PLoS Negl Trop Dis, 2009, 3,7: e479<br />

Gu X, Nylander E, Coates PJ and Nylander K<br />

Effect of narrow-band ultraviolet B phototherapy on p63 and microRNA (miR-21 and miR-<br />

125b) expression in psoriatic epidermis.<br />

Acta Derm Venereol, 2011, 91(4): 392-397<br />

Guan X, Lee JJ, Pang M, Shi X, Stelly DM and Chen ZJ<br />

Activation of Arabidopsis seed hair development by cotton fiber-related genes.<br />

PLoS One, 2011, 6,7: e21301<br />

Guenin S, Mouallif M, Deplus R, Lampe X, Krusy N, Calonne E, Delbecque K, Kridelka F, Fuks F, Ennaji<br />

MM, Delvenne P.<br />

Aberrant Promoter Methylation and Expression of UTF1 during Cervical Carcinogenesis.<br />

PLoS One. 2012;7(8):e42704. PubMed<br />

Harris L, Wayland M, Lan M, Ryan M, Giger T, Lockstone H, Wuethrich I, Mimmack M, Wang L, Kotter M,<br />

Craddock R and Bahn S<br />

The cerebral microvasculature in schizophrenia: a laser capture microdissection study.<br />

PLoS ONE, 2008, 3,12: e3964<br />

Hartmann S, Martin-Subero JI, Gesk S, Hüsken J, Giefing M, Nagel I, Riemke J, Chott A, Klapper W,<br />

Parrens M, Merlio JP, Küppers R, Bräuninger A, Siebert R and Hansmann ML<br />

Detection of genomic imbalances in microdissected Hodgkin and Reed-Sternberg cells of<br />

classical Hodgkin's lymphoma by array-based comparative genomic hybridization.<br />

Haematologica, 2008, 93,9: 1318-1326<br />

Hasselblatt M, Mertsch S, Koos B, Riesmeier B, Stegemann H, Jeibmann A, Tomm M, Schmitz N, Wrede<br />

B, Wolff JE, Zheng W and Paulus W<br />

TWIST-1 is overexpressed in neoplastic choroid plexus epithelial cells and promotes<br />

proliferation and invasion.<br />

Cancer Res, 2009, 69,6: 2219-2223<br />

Hayashi Y, Matsunaga T, Yamamoto G, Nishii K, Usui M, Yamamoto M and Tachikawa T<br />

Comprehensive analysis of gene expression in the junctional epithelium by laser microdissection<br />

and microarray analysis.<br />

J Periodontal Res, 2010, 45,5: 618-625<br />

Heisler L, Pronchuk N, Nonogaki K, Zhou L, Raber J, Tung L, Yeo G, O'Rahilly S, Colmers WF, Elmquist JK<br />

and Tecott LH<br />

Serotonin activates the hypothalamic-pituitary-adrenal axis via serotonin 2C receptor<br />

stimulation.<br />

J Neurosci, 2007, 27,26: 6956-6964<br />

October 2012 86/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Hodgin JB, Borczuk AC, Nasr SH, Markowitz GS, Nair V, Martini S, Eichinger F, Vining C, Berthier CC,<br />

Kretzler M and d'Agati VD<br />

A molecular profile of focal segmental glomerulosclerosis from formalin-fixed, paraffinembedded<br />

tissue.<br />

Am J Pathol, 2010, 177,4: 1674-1686<br />

Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N and Küster H<br />

Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots,<br />

including CAAT-box transcription factor gene expression correlating with fungal contact and<br />

spread.<br />

Plant Physiol, 2011, 157,4: 2023-2043<br />

Ho Hong S, Young Nah H, Yoon Lee J, Chan Gye M, Hoon Kim C and Kyoo Kim M<br />

Analysis of estrogen-regulated genes in mouse uterus using cDNA microarray and laser<br />

capture microdissection.<br />

J Endocrinol, 2004, 181: 157-167<br />

Hong SM, Vincent A, Kanda M, Leclerc J, Omura N, Borges M, Klein AP, Canto MI, Hruban RH, Goggins M.<br />

Genome-Wide Somatic Copy Number Alterations in Low-Grade PanINs and IPMNs from<br />

Individuals with a Family History of Pancreatic Cancer.<br />

Clin Cancer Res. 2012 Aug 15;18(16):4303-12. PubMed<br />

Hu C, Wei W, Chen X, Woodman CB, Yao Y, Nicholls JM, Joab I, Sihota SK, Shao JY, Derkaoui KD, Amari<br />

A, Maloney SL, Bell AI, Murray PG, Dawson CW, Young LS, Arrand JR.<br />

A global view of the oncogenic landscape in nasopharyngeal carcinoma: an integrated analysis<br />

at the genetic and expression levels.<br />

PLoS One. 2012;7(7):e41055. PubMed<br />

Hughes S, Pothecary CA, Jagannath A, Foster RG, Hankins MW, Peirson SN.<br />

Profound defects in pupillary responses to light in TRPM-channel null mice: a role for TRPM<br />

channels in non-image-forming photoreception.<br />

Eur J Neurosci. 2012 Jan;35(1):34-43. doi: 10.1111/j.1460-9568.2011.07944.x. PubMed<br />

Huizar I, Malur A, Midgette YA, Kukoly C, Chen P, Ke PC, Podila R, Rao AM, Wingard CJ, Dobbs L, Barna<br />

BP, Kavuru MS and Thomassen MJ<br />

Novel murine model of chronic granulomatous lung inflammation elicited by carbon<br />

nanotubes.<br />

Am J Respir Cell Mol Biol, 2011, 45,4: 858-866<br />

Irié T, Aida T and Tachikawa T<br />

Gene expression profiling of oral squamous cell carcinoma using laser microdissection and<br />

cDNA microarray.<br />

Mod Electron Microsc, 2004, 37: 89-96<br />

Ivanidze J, Hoffmann R, Lochmüller H, Engel AG, Hohlfeld R and Dornmair K<br />

Inclusion body myositis: laser microdissection reveals differential up-regulation of IFN-γ<br />

signaling cascade in attacked versus nonattacked myofibers.<br />

Am J Pathol, 2011, 179,3: 1347-1359<br />

Jaeger J, Koczan D, Thiesen HJ, Ibrahim SM, Gross G, Spang R and Kunz M.<br />

Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in<br />

laser-microdissected melanoma tissues.<br />

Clin Cancer Res, 2007,13,3: 806-815<br />

Jovanovic Z, Tung YC, Lam BY, O'Rahilly S and Yeo GS<br />

Identification of the global transcriptomic response of the hypothalamic arcuate nucleus to<br />

fasting and leptin.<br />

J Neuroendocrinol, 2010, 22,8: 915-925<br />

Kang Y, Norris MH, Zarzycki-Siek J, Nierman WC, Donachie SP and Hoang TT<br />

Transcript amplification from single bacterium for transcriptome analysis.<br />

Genome Res, 2011, 21,6: 925-935<br />

Kayashima T, Nakata K, Ohuchida K, Ueda J, Shirahane K, Fujita H, Cui L, Mizumoto K and Tanaka M<br />

Insig2 is overexpressed in pancreatic cancer and its expression is induced by hypoxia.<br />

Cancer Sci, 2011, 102,6: 1137-1143<br />

October 2012 87/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kela I, Harmelin A, Waks T, Orr-Urtreger A, Domany E and Eshhar Z<br />

Interspecies comparison of prostate cancer gene-expression profiles reveals genes associated<br />

with aggressive tumors.<br />

Prostate, 2009, 69,10: 1034-1044<br />

Königshoff M, Kramer M, Balsara N, Wilhelm J, Amarie OV, Jahn A, Rose F, Fink L, Seeger W, Schaefer L,<br />

Günther A and Eickelberg O<br />

WNT1-inducible signaling protein-1 mediates pulmonary fibrosis in mice and is upregulated in<br />

humans with idiopathic pulmonary fibrosis.<br />

J Clin Invest, 2009, 119,4: 772-787<br />

Koos B, Bender S, Witt H, Mertsch S, Felsberg J, Beschorner R, Korshunov A, Riesmeier B, Pfister S,<br />

Paulus W and Hasselblatt M<br />

The transcription factor evi-1 is overexpressed, promotes proliferation, and is prognostically<br />

unfavorable in infratentorial ependymomas.<br />

Clin Cancer Res, 2011, 17,11: 3631-3637<br />

Kopper O, Giladi O, Golan-Lev T and Benvenisty N<br />

Characterization of gastrulation-stage progenitor cells and their inhibitory crosstalk in human<br />

embryoid bodies.<br />

Stem Cells, 2010, 28,1: 75-83<br />

Kuga D, Mizoguchi M, Guan Y, Hata N, Yoshimoto K, Shono T, Suzuki SO, Kukita Y, Tahira T, Nagata S,<br />

Sasaki T and Hayashi K<br />

Prevalence of copy number neutral LOH in glioblastomas revealed by genome-wide analysis of<br />

laser-microdissected tissues.<br />

Neuro Oncol, 2008, 10,6: 995-1003<br />

Labied S, Blacher S, Carmeliet P, Noël A, Frankenne F, Foidart JM and Munaut C<br />

Transient reduction of placental angiogenesis in PAI-1-deficient mice.<br />

Physiol Genomics, 2011, 43,4: 188-198<br />

Lajer CB, Garnæs E, Friis-Hansen L, Norrild B, Therkildsen MH, Glud M, Rossing M, Lajer H, Svane D,<br />

Skotte L, Specht L, Buchwald C, Nielsen FC.<br />

The role of miRNAs in human papilloma virus (HPV)-associated cancers: bridging between<br />

HPV-related head and neck cancer and cervical cancer.<br />

Br J Cancer. 2012 Apr 24;106(9):1526-34. PubMed PMID: 22472886. PubMed<br />

Laurén HB, Lopez-Picon FR, Brandt AM, Rios-Rojas CJ and Holopainen IE<br />

Transcriptome analysis of the hippocampal CA1 pyramidal cell region after kainic acid-induced<br />

status epilepticus in juvenile rats.<br />

PLoS One, 2010, 5,5: e10733<br />

Lauridsen JB, Johansen JL, Rekling JC, Thirstrup K, Moerk A and Sager TN<br />

Regulation of the Bcas1 and Baiap3 transcripts in the subthalamic nucleus in mice recovering<br />

from MPTP toxicity.<br />

Neurosci Res, 2011, 70,3: 269-276<br />

Lechner S, Müller-Ladner U, Renke B, Schölmerich J, Rüschoff J and Kullmann F<br />

Gene expression pattern of laser microdissected colonic crypts of adenomas with low grade<br />

dysplasia.<br />

Gut, 2003, 52: 1148-1153<br />

Lechner S, Müller-Ladner U, Neumann E, Dietmaier W, Welsh J, Schölmerich J, Rüschoff J and Kullmann F<br />

Use of simplified transcriptors for the analysis of gene expression profiles in lasermicrodissected<br />

cell populations.<br />

Lab Invest, 2001, 81: 1233-1242<br />

Lewis A, Segditsas S, Deheragoda M, Pollard P, Jeffery R, Nye E, Lockstone H, Davis H, Stamp G,<br />

Poulsom R, Wright N and Tomlinson I<br />

Severe polyposis in Apc (1322T) mice is associated with submaximal Wnt signalling and increased<br />

expression of the stem cell marker Lgr5.<br />

Gut, 2010, 59,12: 1680-1686<br />

October 2012 88/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Li S, Park H, Trempus CS, Gordon D, Liu Y, Cotsarelis G, Morris RJ.<br />

A keratin 15 containing stem cell population from the hair follicle contributes to squamous<br />

papilloma development in the mouse.<br />

Mol Carcinog. 2012 Mar 16. doi: 10.1002/mc.21896. PubMed<br />

Locke JA, Guns ES, Lehman ML, Ettinger S, Zoubeidi A, Lubik A, Margiotti K, Fazli L, Adomat H, Wasan<br />

KM, Gleave ME and Nelson CC<br />

Arachidonic acid activation of intratumoral steroid synthesis during prostate cancer<br />

progression to castration resistance.<br />

Prostate, 2010, 70,3: 239-251<br />

Londhe KB, Borlak J.<br />

A Cross-Platform Comparison of Genome-Wide Expression Changes of Laser Microdissected<br />

Lung Tissue of C-Raf Transgenic Mice Using 3'IVT and Exon Array.<br />

PLoS One. 2012;7(7):e40778. PubMed<br />

Malusecka E, Fiszer-Kierzkowska A, Herik R, Wronski S, Rembak-Szynkiewicz J.<br />

Combining Laser-Assisted Microdissection with/and Immunohistochemistry – RNA Quality of<br />

Clinical LCM-Derived Samples.<br />

J Clinic Experiment Pathol. 2012, in press, doi: 10.4172/2161-0681.1000112<br />

Marotta D, Karar J, Jenkins WT, Kumanova M, Jenkins KW, Tobias JW, Baldwin D, Hatzigeorgiou A,<br />

Alexiou P, Evans SM, Alarcon R, Maity A, Koch C and Koumenis C<br />

In vivo profiling of hypoxic gene expression in gliomas using the hypoxia marker EF5 and<br />

laser-capture microdissection.<br />

Cancer Res, 2011, 71,3: 779-789<br />

Morrogh M, Andrade VP, Giri D, Sakr RA, Paik W, Qin LX, Arroyo CD, Brogi E, Morrow M and King TA<br />

Cadherin-catenin complex dissociation in lobular neoplasia of the breast.<br />

Breast Cancer Res Treat, 2011, in press<br />

Nakata K, Ohuchida K, Mizumoto K, Kayashima T, Ikenaga N, Sakai H, Lin C, Fujita H, Otsuka T, Aishima<br />

S, Nagai E, Oda Y and Tanaka M<br />

MicroRNA-10b is overexpressed in pancreatic cancer, promotes its invasiveness, and<br />

correlates with a poor prognosis.<br />

Surgery, 2011, 150,5: 916-922<br />

Nawaratna SS, McManus DP, Moertel , Gobert GN and Jones MK<br />

Gene atlasing of digestive and reproductive tissues in Schistosoma mansoni.<br />

PLoS Negl Trop Dis, 2011, in press<br />

Oeschger FM, Wang WZ, Lee S, García-Moreno F, Goffinet AM, Arbonés ML, Rakic S and Molnár Z<br />

Gene Expression Analysis of the Embryonic Subplate.<br />

Cereb Cortex, 2011, in press<br />

Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans M, Beck J, Buckner B,<br />

Janick-Buckner D, Nettleton D, Scanlon MJ and Schnable PS<br />

Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).<br />

Plant J, 2007, 52,3: 391-404<br />

Ohuchida K, Mizumoto K, Ishikawa N, Fujii K, Konomi H, Nagai E, Yamaguchi K, Tsuneyoshi M and<br />

Tanaka M<br />

The role of S100A6 in pancreatic cancer development and its clinical implication as a<br />

diagnostic marker and therapeutic target.<br />

Clin Cancer Res, 2005, 11,21: 7785-7793<br />

Otto C, Giefing M, Massow A, Vater I, Gesk S, Schlesner M, Richter J, Klapper W, Hansmann ML, Siebert<br />

R, Küppers R.<br />

Genetic lesions of the TRAF3 and MAP3K14 genes in classical Hodgkin lymphoma.<br />

Br J Haematol. 2012 Jun;157(6):702-8. doi: 10.1111/j.1365-2141.2012.09113.x. PubMed<br />

Peng T, Zhu J, Phasouk K, Koelle DM, Wald A, Corey L.<br />

An Effector Phenotype of CD8+ T Cells at the Junction Epithelium during Clinical Quiescence of<br />

Herpes Simplex Virus 2 Infection.<br />

J Virol. 2012 Oct;86(19):10587-96. PubMed<br />

October 2012 89/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Perrin FE, Boisset G, Lathuilière A and Kato AC<br />

Cell death pathways differ in several mouse models with motoneurone disease: analysis of<br />

pure motoneurone populations at a presymptomatic age.<br />

J Neurochem, 2006, 98,6: 1959-1972<br />

Perrin FE, Boisset G, Docquier M, Schaad O, Descombes P and Kato AC<br />

No widespread induction of cell death genes occurs in pure motoneurons in an ALS mouse<br />

model.<br />

Hum Mol Genet, 2005, 14,21: 3309-3321<br />

Plummer S, Sharpe RM, Hallmark N, Mahood IK and Elcombe C<br />

Time-dependent and compartment-specific effects of in utero exposure to di(n-butyl)<br />

phthalate on gene/protein expression in the fetal rat testis as revealed by transcription<br />

profiling and laser capture microdissection.<br />

Toxicol Sci, 2007, 97,2: 520-532<br />

Pothuri B, Leitao MM, Levine DA, Viale A, Olshen AB, Arroyo C, Bogomolniy F, Olvera N, Lin O, Soslow<br />

RA, Robson ME, Offit K, Barakat RR and Boyd J<br />

Genetic analysis of the early natural history of epithelial ovarian carcinoma.<br />

PLoS One, 2010, e10358<br />

Purdie KJ, Harwood CA, Gibbon K, Chaplin T, Young BD, Cazier JB, Singh N, Leigh IM and Proby CM<br />

High-resolution genomic profiling of human papillomavirus-associated vulval neoplasia.<br />

Br J Cancer, 2010, 102,6: 1044-1051<br />

Rodrıguez-Gonzalez FG, Mustafa DA, Mostert B, Sieuwerts AM.<br />

The challenge of gene expression profiling in heterogeneous clinical samples.<br />

Methods. 2012 May 29. PubMed<br />

Roepman P, de Koning E, van Leenen D, de Weger RA, Kummer JA, Slootweg PJ and Holstege FC<br />

Dissection of a metastatic gene expression signature into distinct components.<br />

Genome Biol, 2006, 7,12: R117<br />

Roesch A, Vogt T, Stolz W, Dugas M, Landthaler M and Becker B<br />

Discrimination between gene expression patterns in the invasive margin and the tumour core<br />

of malignant melanomas.<br />

Melanoma Res, 2003, 13: 503-509<br />

Rohrbeck A and Borlak J<br />

Cancer genomics identifies regulatory gene networks associated with the transition from<br />

dysplasia to advanced lung adenocarcinomas induced by c-Raf-1.<br />

PLoS One, 2009, 4,10: e7315<br />

Rohrbeck A, Müller VS and Borlak J<br />

Molecular characterization of lung dysplasia induced by c-Raf-1.<br />

PLoS One, 2009, 4,5: e5637<br />

Roy S, Khanna S, Kuhn DE, Rink C, Williams WT, Zweier JL and Sen CK<br />

Transcriptome analysis of the ischemia-reperfused remodeling myocardium: temporal changes<br />

in inflammation and extracellular matrix.<br />

Physiol Genomics, 2006, 25,3: 364-374<br />

Saare M, Sõritsa D, Vaidla K, Palta P, Remm M, Laan M, Karro H, Sõritsa A, Salumets A, D'Hooghe T,<br />

Peters M.<br />

No evidence of somatic DNA copy number alterations in eutopic and ectopic endometrial tissue<br />

in endometriosis.<br />

Hum Reprod. 2012 Jun;27(6):1857-64. PubMed PMID: 22473391. PubMed<br />

Schain F, Tryselius Y, Sjöberg J, Porwit A, Backman L, Malec M, Xu D, Vockerodt M, Baumforth KR, Wei<br />

W, Murray PG, Björkholm M and Claesson HE<br />

Evidence for a pathophysiological role of cysteinyl leukotrienes in classical Hodgkin<br />

lymphoma.<br />

Int J Cancer, 2008, 123,10: 2285-2293<br />

October 2012 90/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Scheidl SJ, Nilsson S, Kalén M, Hellström M, Takemoto M, Håkansson J and Lindahl P<br />

mRNA expression profiling of laser microbeam microdissected cells from slender embryonic<br />

structures.<br />

Am J Pathol, 2002, 160,3: 801-813<br />

Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R and Rolletschek H<br />

A novel procedure for the quantitative analysis of metabolites, storage products and<br />

transcripts of laser microdissected seed tissues of Brassica napus.<br />

Plant Methods, 2011, in press<br />

Schlomm T, Luebke AM, Sultmann H, Hellwinkel OJ, Sauer U, Poustka A, David KA, Chun FK, Haese A,<br />

Graefen M, Erbersdobler A and Huland H<br />

Extraction and processing of high quality RNA from impalpable and macroscopically invisible<br />

prostate cancer for microarray gene expression analysis.<br />

Int J Oncol, 2005, 27,3: 713-720<br />

Schmitz R, Hansmann ML, Bohle V, Martin-Subero J, Hartmann S, Mechtersheimer G, Klapper W, Vater I,<br />

Giefing M, Gesk S, Stanelle J, Siebert R and Küppers R<br />

TNFAIP3 (A20) is a tumor suppressor gene in Hodgkin lymphoma and primary mediastinal B<br />

cell lymphoma.<br />

J Exp Med, 2009, 206,5: 981-989<br />

Schütze K, Becker B, Bernsen M, Björnsen T, Brocksch D, Bush C, Clement-Sengewald A, van Dijk MCRF,<br />

Friedemann G, Heckl W, Lahr G, Lindahl P, Mayer A, Nilsson S, Scheidl SJ, Stich M, Stolz W, Takemoto M,<br />

Thalhammer S, Vogt T and Burgemeister R<br />

Laser Pressure Catapulting.<br />

In DNA Microarrays (A molecular cloning manual), ed. Bowtell D and Sambrook J, CSHL Press New York,<br />

2002: 331-356<br />

Shaikhibrahim Z, Lindstrot A, Ellinger J, Rogenhofer S, Buettner R and Wernert N<br />

Genes differentially expressed in the peripheral zone compared to the transitional zone of the<br />

normal human prostate and their potential regulation by ETS factors.<br />

Mol Med Report, 2012, 5,1: 32-36<br />

Simonin Y, Perrin FE and Kato AC<br />

Axonal involvement in the Wlds neuroprotective effect: analysis of pure motoneurons in a<br />

mouse model protected from motor neuron disease at a pre-symptomatic age.<br />

J Neurochem, 2007, 101: 530-542<br />

Slavova N, Drescher A, Visekruna A, Dullat S, Kroesen AJ, Ritz JP and Buhr HJ<br />

NALP expression in Paneth cells provides a novel track in IBD signaling.<br />

Langenbecks Arch Surg, 2010, 395,4: 351-357<br />

Sodir NM, Swigart LB, Karnezis AN, Hanahan D, Evan GI and Soucek L<br />

Endogenous Myc maintains the tumor microenvironment.<br />

Genes Dev, 2011, 25,9: 907-916<br />

Sohn P, Cox M, Chen D and Serra R<br />

Molecular profiling of the developing mouse axial skeleton: A role for Tgfbr2 in the<br />

development of the intervertebral disc.<br />

BMC Dev Biol, 2010, 9:29<br />

Spee B, Carpino G, Schotanus BA, Katoonizadeh A, Vander Borght S, Gaudio E and Roskams T<br />

Characterisation of the activated liver progenitor cell niche, potential involvement of Wnt and<br />

Notch signalling.<br />

Gut, 2010, 59,2: 247-257<br />

Stemmer K and Dietrich DR<br />

Application of laser-capture microdissection to study renal carcinogenesis.<br />

Methods Mol Biol, 2011, 755: 279-290<br />

Stemmer K, Ellinger-Ziegelbauer H, Ahr HJ and Dietrich DR<br />

Molecular characterization of preneoplastic lesions provides insight on the development of<br />

renal tumors.<br />

Am J Pathol, 2009, 175,4: 1686-1698<br />

October 2012 91/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Stewart L, Hindmarch CC, Qiu J, Tung YC, Yeo GS and Murphy D<br />

Hypothalamic transcriptome plasticity in two rodent species reveals divergent differential<br />

gene expression but conserved pathways.<br />

J Neuroendocrinol, 2011, 23,2: 177-185<br />

Stierum R, Burgemeister R, van Helvoort A, Peijnenburg A, Schütze K, Seidelin M, Vang O and van<br />

Ommen B<br />

Functional foods against colorectal cancer. An example project integrating functional<br />

genomics, nutrition and health.<br />

Nutr Metab Cardiovasc Dis, 2001, 11,4: 94-98<br />

Stybayeva G, Zhu H, Ramanculov E, Dandekar S, George M and Revzin A<br />

Micropatterned co-cultures of T-lymphocytes and epithelial cells as a model of mucosal<br />

immune system.<br />

Biochem Biophys Res Commun, 2009, 380,3: 575-580<br />

Tauris B, Borg S, Gregersen PL and Holm PB<br />

A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection<br />

and gene expression profiling.<br />

J Exp Bot, 2009, 60,4: 1333-1347<br />

Teramoto K, Negoro N, Kitamoto K, Iwai T, Iwao H, Okamura M and Miura K<br />

Microarray analysis of glomerular gene expression in murine lupus nephritis.<br />

J Pharmacol Sci, 2008, 106,1: 56-67<br />

Thelen P, Burfeind P, Grzmil M, Voigt S, Ringert RH and Hemmerlein B<br />

cDNA microarray analysis with amplified RNA after isolation of intact cellular RNA from<br />

neoplastic and non-neoplastic prostate tissue separated by laser microdissections.<br />

Int J Oncol, 2004, 24: 1085-1092<br />

Thiel J, Weier D, Sreenivasulu N, Strickert M, Weichert N, Melzer M, Czauderna T, Wobus U, Weber H and<br />

Weschke W<br />

Different hormonal regulation of cellular differentiation and function in nucellar projection and<br />

endosperm transfer cells: a microdissection-based transcriptome study of young barley grains.<br />

Plant Physiol, 2008, 148,3: 1436-1452<br />

Tian XF, Fan XG, Zhang Y, Huang Y, Dai H and Ying RS<br />

Procuration and identification of bacteria in paraffin-embedded liver tissues of hepatocellular<br />

carcinoma by laser-assisted microdissection technique.<br />

APMIS, 2008, 116,1: 10-15<br />

Tomioka I, Maeda T, Shimada H, Kawai K, Okada Y, Igarashi H, Oiwa R, Iwasaki T, Aoki M, Kimura T,<br />

Shiozawa S, Shinohara H, Suemizu H, Sasaki E and Okano H<br />

Generating induced pluripotent stem cells from common marmoset (Callithrix jacchus) fetal<br />

liver cells using defined factors, including Lin28.<br />

Genes Cells, 2010, 15,9: 959-969<br />

Tsubaki T, Arita N, Kawakami T, Shiratsuchi T, Yamamoto H, Takubo N, Yamada K, Nakata S, Yamamoto<br />

S and Nose M<br />

Characterization of histopathology and gene-expression profiles of synovitis in early<br />

rheumatoid arthritis using targeted biopsy specimens.<br />

Arthritis Res, 2005, 7,4: R825-836<br />

Tung YC, Ma M, Piper S, Coll A, O'Rahilly S and Yeo GS<br />

Novel leptin-regulated genes revealed by transcriptional profiling of the hypothalamic<br />

paraventricular nucleus.<br />

J Neurosci, 2008, 28,47: 12419-12426<br />

Vandewoestyne M, Kumps C, Swerts K, Menten B, Lammens T, Philippé J, De Preter K, Laureys G, Van<br />

Roy N, Speleman F and Deforce D<br />

Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment<br />

risk assessment by array comparative genomic hybridization.<br />

Int J Cancer, 2011, in press<br />

October 2012 92/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Volger OL, Fledderus JO, Kisters N, Fontijn RD, Moerland PD, Kuiper J, van Berkel TJ, Bijnens AP, Daemen<br />

MJ, Pannekoek H and Horrevoets AJ<br />

Distinctive expression of chemokines and transforming growth factor-ß signaling in human<br />

arterial endothelium during atherosclerosis.<br />

Am J Pathol, 2007, 171,1: 326-337<br />

Voo SS, Grimes HD, Lange BM.<br />

Cell type-specific transcriptome analysis of the soybean leaf paraveinal mesophyll layer.<br />

Plant Mol Biol Rep. 2012, DOI 10.1007/s11105-012-0494-7<br />

Walch A, Komminoth P, Hutzler P, Aubele M, Höfler H and Werner M<br />

Microdissection of tissue sections: Application to the molecular genetic characterization of<br />

premalignant lesions.<br />

Pathobiology, 2000, 68: 9-17<br />

Waldmann J, Fendrich V, Holler J, Buchholz M, Heinmöller E, Langer P, Ramaswamy A, Samans B, Walz<br />

MK, Rothmund M, Bartsch DK and Slater EP<br />

Microarray analysis reveals differential expression of benign and malignant pheochromocytoma.<br />

Endocr Relat Cancer, 2010, 17,3: 743-756<br />

Westbury CB, Reis-Filho JS, Dexter T, Mahler-Araujo B, Fenwick K, Iravani M, Grigoriadis A, Parry S,<br />

Robertson D, Mackay A, Ashworth A, Yarnold JR and Isacke CM<br />

Genome-wide transcriptomic profiling of microdissected human breast tissue reveals<br />

differential expression of KIT (c-Kit, CD117) and oestrogen receptor-α (ERα) in response to<br />

therapeutic radiation.<br />

J Pathol, 2009, 219,1: 131-140<br />

Wild PJ, Herr A, Wissmann C, Stoehr R, Rosenthal A, Zaak D, Simon R, Knuechel R, Pilarsky C and<br />

Hartmann A<br />

Gene expression profiling of progressive papillary noninvasive carcinomas of the urinary<br />

bladder.<br />

Clin Cancer Res, 2005, 11,12: 4415-4429<br />

Xiao Y, Karnati S, Qian G, Nenicu A, Fan W, Tchatalbachev S, Höland A, Hossain H, Guillou F, Lüers GH,<br />

Baumgart-Vogt E.<br />

Cre-mediated stress affects sirtuin expression levels, peroxisome biogenesis and metabolism,<br />

antioxidant and proinflammatory signaling pathways.<br />

PLoS One. 2012;7(7):e41097. PubMed<br />

Xie Y, Xiao G, Coombes KR, Behrens C, Solis LM, Raso G, Girard L, Erickson HS, Roth J, Heymach JV,<br />

Moran C, Danenberg K, Minna JD and Wistuba II<br />

Robust gene expression signature from formalin-fixed paraffin-embedded samples predicts<br />

prognosis of non-small-cell lung cancer patients.<br />

Clin Cancer Res, 2011, 17,17: 5705-5714<br />

Yanaihara A, Otsuka Y, Iwasaki S, Koide K, Aida T and Okai T<br />

Comparison in gene expression of secretory human endometrium using lasermicrodissection.<br />

Reprod Biol Endocrinol, 2004, 2,1: 66<br />

Yu J, Li A, Hong SM, Hruban RH and Goggins M<br />

MicroRNA alterations of pancreatic intraepithelial neoplasms (PanINs).<br />

Clin Cancer Res, 2011, in press<br />

Zhang X, Douglas RN, Strable J, Lee M, Buckner B, Janick-Buckner D, Schnable PS, Timmermans MC,<br />

Scanlon M.<br />

PUNCTATE VASCULAR EXPRESSION1 (PVE1) is a novel maize gene required for leaf pattern<br />

formation that functions downstream of the ta-siARF pathway.<br />

Plant Physiol. 2012 PubMed PMID: 22669891. PubMed<br />

Zhang X, Madi S, Borsuk L, Nettleton D, Elshire RJ, Buckner B, Janick-Buckner D, Beck J, Timmermans M,<br />

Schnable PS and Scanlon MJ<br />

Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the<br />

shoot apical meristem.<br />

PLoS Genet, 2007, 3,6: e101<br />

October 2012 93/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Zhou W, Muggerud A, Vu P, Due EU, Sørlie T, Børresen-Dale AL, Wärnberg F and Langerød A<br />

Full sequencing of TP53 identifies identical mutations within in situ and invasive components<br />

in breast cancer suggesting clonal evolution.<br />

Mol Oncol, 2009, 3: 214-219<br />

Zhou M, Li XM and Lavker RM<br />

Transcriptional profiling of enriched populations of stem cells versus transient amplifying<br />

cells: a comparison of limbal and corneal epithelial basal cells.<br />

J Biol Chem, 2006, 281,28: 19600-19609<br />

Ziegler L, Segal-Ruder Y, Coppola G, Reis A, Geschwind D, Fainzilber M and Goldstein RS<br />

A human neuron injury model for molecular studies of axonal regeneration.<br />

Exp Neurol, 2010, 223,1: 119-127<br />

1.3 Proteomics<br />

Asomugha CO, Gupta R and Srivastava OP<br />

Identification of crystallin modifications in the human lens cortex and nucleus using laser<br />

capture microdissection and CyDye labeling.<br />

Mol Vis, 2010, 16: 476-494<br />

Bedford L, Hay D, Devoy A, Paine S, Powe DG, Seth R, Gray T, Topham I, Fone K, Rezvani N, Mee M,<br />

Soane T, Layfield R, Sheppard PW, Ebendal T, Usoskin D, Lowe J and Mayer RJ<br />

Depletion of 26S proteasomes in mouse brain neurons causes neurodegeneration and Lewy-<br />

like inclusions resembling human pale bodies.<br />

J Neurosci, 2008, 28,33: 8189-8198<br />

Boltze C, Schneider-Stock R, Quednow C, Hinze R, Mawrin C, Hribaschek A, Roessner A and Hoang-Vu C<br />

Silencing of the maspin gene by promoter hypermethylation in thyroid cancer.<br />

Int J Mol Med, 2003, 12: 479-484<br />

Braakman RB, Tilanus-Linthorst MM, Liu NQ, Stingl C, Dekker LJ, Luider TM, Martens JW, Foekens JA,<br />

Umar A.<br />

Optimized nLC-MS workflow for laser capture microdissected breast cancer tissue.<br />

J Proteomics. 2012 Jan 24. [Epub ahead of print]. PubMed<br />

Braakman RB, Luider TM, Martens JW, Foekens JA and Umar A<br />

Laser capture microdissection applications in breast cancer proteomics.<br />

Methods Mol Biol, 2011, 755: 143-154<br />

Burnet PWJ, Eastwood SL and Harrison PJ<br />

Laser-assisted microdissection: Methods for the molecular analysis of psychiatric disorders at<br />

a cellular resolution.<br />

Biol Psychiatry, 2004, 55: 107-111<br />

Careri M, Mangia A.<br />

Trends in analytical atomic and molecular mass spectrometry in biology and the life sciences.<br />

Anal Bioanal Chem. 2011 Mar;399(8):2585-95. PubMed<br />

Cooper J<br />

Laser Microdissection for research into the molecular neuropathology of Batten disease.<br />

Microsc Anal, 2006, 20,5: 11-12<br />

De la Cuesta F, Alvarez-Llamas G, Maroto AS, Donado A, Zubiri I, Posada M, Padial LR, Pinto AG,<br />

Barderas MG and Vivanco F<br />

A proteomic focus on the alterations occurring at the atherosclerotic coronary intima.<br />

Mol Cell Proteomics, 2011, in press<br />

Dietrich DR, Heussner AH, O'Brien E, Gramatté T, Runkel M, Rumpf S and Day BW<br />

Propiverine-induced accumulation of nuclear and cytosolic protein in F344 rat kidneys:<br />

isolation and identification of the accumulating protein.<br />

Toxicol Appl Pharmacol, 2008, 233,3: 411-419<br />

October 2012 94/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Doppler K, Lindner A, Schütz W, Schütz M and Bornemann A<br />

Gain and loss of extracellular molecules in sporadic inclusion body myositis and polymyositis-<br />

a proteomics-based study.<br />

Brain Pathol, 2011, in press<br />

Dos Santos A, Court M, Thiers V, Sar S, Guettier C, Samuel D, Bréchot C, Garin J, Demaugre F and<br />

Masselon CD<br />

Identification of cellular targets in human intrahepatic cholangiocarcinoma using laser<br />

microdissection and AMT-tag proteomics.<br />

Mol Cell Proteomics, 2010, 9,9: 1991-2004<br />

von Eggeling F, Melle C and Ernst G<br />

Microdissecting the proteome.<br />

Proteomics, 2007, 7,16: 2729-2737<br />

von Eggeling F, Melle C and Ernst G<br />

Biomarker discovery by tissue microdissection and ProteinChip array analysis.<br />

J Lab Med, 2003, 27,3/4: 79-84<br />

Ekegren T, Hanrieder J, Aquilonius SM and Bergquist J<br />

Focused proteomics in post-mortem human spinal cord.<br />

J Proteome Res, 2006, 5,9: 2364-2371<br />

Ernst G, Melle C, Schimmel B, Bleul A and v Eggeling F<br />

Proteohistography - direct analysis of tissue with high sensitivity and high spatial resolution<br />

using ProteinChip technology.<br />

J Histochem Cytochem, 2006, 54: 13-17<br />

Escher N, Ernst G, Melle C, Berndt A, Clement JH, Junker K, Friedrich K, Guntinas-Lichius O and von<br />

Eggeling F<br />

Comparative proteomic analysis of normal and tumor stromal cells by tissue on chip based<br />

mass spectrometry (toc-MS).<br />

Diagn Pathol, 2010, 28,5: 10<br />

Evans EA, Zhang H and Martin-DeLeon PA<br />

SPAMI SPAMI (PH-20) protein and mRNA expression in the epididymides of humans and<br />

macaques: Utilizing laser microdissection/RT-PCR.<br />

Reprod Biol Endocrinol, 2003, 1: 1-12<br />

Ferri N, Carragher NO and Raines EW<br />

Role of discoidin domain receptors 1 and 2 in human smooth muscle cell-mediated collagen<br />

remodeling.<br />

Am J Pathol, 2004, 164,5: 1575-1585<br />

de Groot CJ, Steegers-Theunissen RP, Guzel C, Steegers EA and Luider TM<br />

Peptide patterns of laser dissected human trophoblasts analyzed by matrix-assisted laser<br />

desorption/ionisation-time of flight mass spectrometry.<br />

Proteomics, 2005,5: 597-607<br />

Guzel C, Ursem N, Dekker L, Derkx P, Joore J, van Dijk E, Ligtvoet G, Steegers E and Luider T<br />

Multiple reaction monitoring assay for pre-eclampsia related calcyclin peptides in formalin<br />

fixed paraffin embedded placenta.<br />

J Prot Res, 2011, in press<br />

Hashimoto M, Bogdanovic N, Volkmann I, Aoki M, Winblad B and Tjernberg LO<br />

Analysis of microdissected human neurons by a sensitive ELISA reveals a correlation between<br />

elevated intracellular concentrations of Aß42 and Alzheimer's disease neuropathology.<br />

Acta Neuropathol, 2010, 119,5: 543-554<br />

Heel K and Dawkins H<br />

Laser microdissection and optical tweezers in research.<br />

Today’s Life Science, 2001, 13,2: 42-48<br />

Jones MK, Higgins T, Stenzel DJ and Gobert GN<br />

Towards tissue specific transcriptomics and expression pattern analysis in schistosomes using<br />

laser microdissection microscopy.<br />

Exp Parasitol, 2007, 117,3: 259-266<br />

October 2012 95/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kakehashi A, Inoue M, Wei M, Fukushima S and Wanibuchi H<br />

Cytokeratin 8/18 overexpression and complex formation as an indicator of GST-P positive foci<br />

transformation into hepatocellular carcinomas.<br />

Toxicol Appl Pharmacol, 2009, 238,1: 71-79<br />

Kaspar S, Weier D, Weschke W, Mock HP, Matros A.<br />

Protein analysis of laser capture micro-dissected tissues revealed cell-type specific biological<br />

functions in developing barley grains.<br />

Anal Bioanal Chem. 2010 Dec;398(7-8):2883-93. PubMed<br />

Kaspar S, Peukert M, Svatos A, Matros A and Mock HP<br />

MALDI-imaging mass spectrometry - An emerging technique in plant biology.<br />

Proteomics, 2011, 11,9: 1840-1850<br />

Kehr J<br />

Single cell technology.<br />

Curr Opin Plant Biol, 2003, 6,6: 617-621<br />

Kubo N, Akita N, Shimizu A, Kitahara H, Parker AL and Miyagawa S<br />

Identification of oligopeptide binding to colon cancer cells separated from patients using laser<br />

capture microdissection.<br />

J Drug Target, 2008, 16,5: 396-404<br />

Kwapiszewska G, Meyer M, Bogumil R, Bohle RM, Seeger W, Weissmann N and Fink L<br />

Identification of proteins in laser-microdissected small cell numbers by SELDI-TOF and<br />

Tandem MS.<br />

BMC Biotechnol, 2004, 4: 30<br />

Lassen S, Wiebring A, Helmholz H, Ruhnau C, Prange A.<br />

Isolation of a Nav channel blocking polypeptide from Cyanea capillata medusae - a neurotoxin<br />

contained in fishing tentacle isorhizas.<br />

Toxicon. 2012 May;59(6):610-6. PubMed PMID: 22402177. PubMed<br />

Leverenz JB, Umar I, Wang Q, Montine TJ, McMillan PJ, Tsuang DW, Jin J, Pan C, Shin J, Zhu D and<br />

Zhang J<br />

Proteomic identification of novel proteins in cortical Lewy Bodies.<br />

Brain Pathol, 2007, 17,2: 139-145<br />

Maitre M, Roullot-Lacarrière V, Piazza PV and Revest JM<br />

Western blot detection of brain phosphoproteins after performing Laser Microdissection and<br />

Pressure Catapulting (LMPC).<br />

J Neurosci Methods, 2011, 198,2: 204-212<br />

Maxwell GL, Hood BL, Day R, Chandran U, Kirchner D, Kolli VS, Bateman NW, Allard J, Miller C, Sun M,<br />

Flint MS, Zahn C, Oliver J, Banerjee S, Litzi T, Parwani A, Sandburg G, Rose S, Becich MJ, Berchuck A,<br />

Kohn E, Risinger JI and Conrads TP<br />

Proteomic analysis of stage I endometrial cancer tissue: Identification of proteins associated<br />

with oxidative processes and inflammation.<br />

Gynecol Oncol, 2011, 121,3: 586-594<br />

Melle C, Ernst G, Winkler R, Schimmel B, Klussmann JP, Wittekindt C, Guntinas-Lichius O and von<br />

Eggeling F<br />

Proteomic analysis of human papillomavirus-related oral squamous cell carcinoma:<br />

identification of thioredoxin and epidermal-fatty acid binding protein as upregulated protein<br />

markers in microdissected tumor tissue.<br />

Proteomics, 2009, 9,8: 2193-2201<br />

Melle C, Ernst G, Schimmel B, Bleul A and von Eggeling F<br />

Colon-derived liver metastasis, colorectal carcinoma, and hepatocellular carcinoma can be<br />

discriminated by the Ca(2+)-binding proteins S100A6 and S100A11.<br />

PLoS ONE, 2008, 3,12: e3767<br />

Melle C, Kaufmann R, Hommann M, Bleul A, Driesch D, Ernst G and v Eggeling F<br />

Proteomic profiling in microdissected hepatocellular carcinoma tissue using ProteinChip<br />

technology.<br />

Int J Oncol, 2004, 24: 885-891<br />

October 2012 96/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Melle C, Ernst G, Schimmel B, Bleul A, Koscielny S, Wiesner A, Bogumil R, Möller U, Osterloh D,<br />

Halbhuber KJ and v Eggeling F<br />

A technical triade for proteomic identification and characterization of cancer biomarkers.<br />

Cancer Res, 2004, 64: 4099-4104<br />

Melle C, Ernst G, Schimmel B, Bleul A, Koscielny S, Wiesner A, Bogumil R, Moller U, Osterloh D,<br />

Halbhuber KJ and von Eggeling F<br />

Biomarker discovery and identification in laser microdissected head and neck squamous cell<br />

carcinoma with ProteinChip� technology, two-dimensional gel electrophoresis, tandem mass<br />

spectrometry and immunohistochemistry.<br />

Mol Cell Proteomics, 2003, 27: 443-452<br />

Micke P, Bjornsen T, Scheidl S, Strömberg S, Demoulin JB, Ponten F, Östman A, Lindahl P and Busch C<br />

A fluid cover medium provides superior morphology and preserves RNA integrity in tissue<br />

sections for laser microdissection and pressure catapulting.<br />

J Pathol, 2004; 202: 130-138<br />

Miller-Delaney SF, Das S, Sano T, Jimenez-Mateos EM, Bryan K, Buckley PG, Stallings RL, Henshall DC.<br />

Differential DNA methylation patterns define status epilepticus and epileptic tolerance.<br />

J Neurosci. 2012 Feb 1;32(5):1577-88. PubMed PMID: 22302800. PubMed<br />

Müller U, Ernst G, Melle C, Guthke R and von Eggeling F<br />

Convergence of the proteomic pattern in cancer.<br />

Bioinformatics, 2006, 22,11: 1293-1296<br />

Mustafa DA, Dekker LJ, Stingl C, Kremer A, Stoop M, Sillevis Smitt PA, Kros JM, Luider TM.<br />

A proteome comparison between physiological angiogenesis and angiogenesis in glioblastoma.<br />

Mol Cell Proteomics. 2012 Jun;11(6):M111.008466. PubMed<br />

Mustafa DA, Dekker LJ, Stingl C, Kremer A, Stoop M, Sillevis Smitt PA, Kros JM, Luider TM.<br />

A proteome comparison between physiological angiogenesis and angiogenesis in glioblastoma.<br />

Mol Cell Proteomics. 2012 Jan 25. PubMed<br />

Mustafa DA, Burgers PC, Dekker LJ, Charif H, Titulaer M, Sillevis Smitt PA, Luider TM and Kros JM<br />

Identification of glioma neovascularisation-related proteins by using MALDI-FTMS and nano-<br />

LC fractionation to microdissected tumor vessels.<br />

Mol Cell Proteomics, 2007, 6,7: 1147-1157<br />

Naidoo K, Jones R, Dmitrovic B, Wijesuriya N, Kocher H, Hart IR and Crnogorac-Jurcevic T<br />

Proteome of formalin-fixed paraffin-embedded pancreatic ductal adenocarcinoma and lymph<br />

node metastases.<br />

J Pathol, 2011, in press<br />

Niyaz Y, Stich M, Sägmüller B, Burgemeister R, Friedemann G, Sauer U, Gangnus R and Schütze K<br />

Noncontact Laser Microdissection and Pressure Catapulting: Sample preparation for genomic,<br />

transcriptomic and proteomic analysis.<br />

Microarrays in Clinical Diagnostics in Methods in Molecular Medicine, 2005, 114: 1-24 (ed. Joos T and<br />

Fortina P)<br />

Niyaz Y and Schütze K<br />

Noncontact Laser Microdissection and Pressure Catapulting: A basic tool in genomics,<br />

transcriptomics and proteomics.<br />

Handbook of Immunohistochemistry and In Situ Hybridization of Human Carcinomas, 2005, 3: 55-63 (ed.<br />

Hayat M)<br />

Niyaz Y and Lahr G<br />

Non-contact Laser Microdissection and Catapulting.<br />

Business briefings, Future Drug Discovery, 2004: 93-98<br />

de Oliveira GP, Maximino JR, Lin CJ and Chadi G<br />

A method to immunolabel rodent spinal cord neurons and glia for molecular study in specific<br />

laser microdissected cells involved in neurodegenerative disorders.<br />

J Mol Histol, 2009, 40,3: 217-225<br />

October 2012 97/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Ostasiewicz P, Zielinska DF, Mann M and Wi niewski JR<br />

Proteome, phosphoproteome, and N-Glycoproteome are quantitatively preserved in<br />

formalin-fixed paraffin-embedded tissue and analyzable by High-Resolution Mass<br />

Spectrometry.<br />

J Proteome Res, 2010, 9,7: 3688-3700<br />

Panchal M, Loeper J, Cossec JC, Perruchini C, Lazar A, Pompon D and Duyckaerts C<br />

Enrichment of cholesterol in microdissected Alzheimer disease senile plaques as assessed by<br />

mass spectrometry.<br />

J Lipid Res, 2010, 51,3: 598-605<br />

Petzold A, Tisdall MM, Girbes AR, Martinian L, Thom M, Kitchen N and Smith M<br />

In vivo monitoring of neuronal loss in traumatic brain injury: a microdialysis study.<br />

Brain, 2011, 134: 464-483<br />

Peukert M, Matros A, Lattanzio G, Kaspar S, Abadía J and Mock HP<br />

Spatially resolved analysis of small molecules by matrix-assisted laser desorption/ionization<br />

mass spectrometric imaging (MALDI-MSI).<br />

New Phytol, 2011, in press, doi: 10.1111/j.1469-8137.2011.03970.x<br />

Philipson O, Lord A, Lalowski M, Soliymani R, Baumann M, Thyberg J, Bogdanovic N, Olofsson T,<br />

Tjernberg LO, Ingelsson M, Lannfelt L, Kalimo H, Nilsson LN.<br />

The Arctic amyloid-β precursor protein (AβPP) mutation results in distinct plaques and<br />

accumulation of N- and C-truncated Aβ.<br />

Neurobiol Aging. 2012 May;33(5):1010.e1-1010.e13. PubMed<br />

Pilchowski R, Stöhr R, von Eggeling F, Hartmann A, Wunderlich H and Junker K<br />

Specific protein patterns characterize metastatic potential of advanced bladder cancer.<br />

J Urol, 2011, in press<br />

Pinzani P, Lind K, Malentacchi F, Nesi G, Salvianti F, Villari D, Kubista M, Pazzagli M and Orlando C<br />

Prostate-specific antigen mRNA and protein levels in laser microdissected cells of human<br />

prostate measured by real-time reverse transcriptase-quantitative polymerase chain reaction<br />

and immuno-quantitative polymerase chain reaction.<br />

Hum Pathol, 2008, 39,10: 1474-1482<br />

Poznanovic S, Wozny W, Schwall GP, Sastri C, Hunzinger C, Stegmann W, Schrattenholz A, Buchner A,<br />

Gangnus R, Burgemeister R and Cahill MA<br />

Differential radioactive proteomic analysis of microdissected renal cell carcinoma tissue by 54<br />

cm isoelectric focusing in serial immobilized pH gradient gels.<br />

J Proteome Res, 2005, 4,6: 2117-2125<br />

Qazi AM, Aggarwal S, Steffer CS, Bouwman DL, Weaver DW, Gruber SA and Batchu RB<br />

Laser capture microdissection of pancreatic ductal adenocarcinoma cells to analyze EzH2 by<br />

Western Blot analysis.<br />

Methods Mol Biol, 2011, 755: 245-256<br />

Rahimi F, Shepherd CE, Halliday GM, Geczy CL and Raftery MJ<br />

Antigen-epitope retrieval to facilitate proteomic analysis of formalin-fixed archival brain<br />

tissue.<br />

Anal Chem, 2006, 78: 7216-7221<br />

Rosell A, Cuadrado E, Ortega-Aznar A, Hernández-Guillamon M, Lo EH and Montaner J<br />

MMP-9-positive neutrophil infiltration is associated to blood-brain barrier breakdown and<br />

basal lamina type IV collagen degradation during hemorrhagic transformation after human<br />

ischemic stroke.<br />

Stroke, 2008, 39,4: 1121-1126<br />

Rubie C, Frick VO, Wagner M, Rau B, Weber C, Kruse B, Kempf K, Tilton B, König J and Schilling M<br />

Enhanced expression and clinical significance of CC-chemokine MIPcarcinoma.<br />

Scand J Immunol, 2006, 63: 468-477<br />

Rullman E, Norrbom J, Strömberg A, Wågsäter D, Rundqvist H, Haas T and Gustafsson T<br />

Endurance exercise activates matrix metalloproteinases in human skeletal muscle.<br />

Appl Physiol, 2009, 106,3: 804-812<br />

October 2012 98/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Sägmüller B, Niyaz Y and Schütze K<br />

Laser-Mikrodissektion zur Gewinnung reiner Proben für die funktionelle Protein-Analyse.<br />

Biospektrum, 2004, 10: 574-575<br />

Satkauskas S and Bagnard D<br />

Local protein synethsis in axonal growth cones. What is next?<br />

Cell Adhesion Migration, 2007, 4: 179-184<br />

Sauber C, Sägmüller B, Neumann M and Kretschmar HA<br />

Identification of proteins in post-mortem human brain tissue by Laser Microdissection/<br />

Pressure Catapult and nano-LC/MS/MS.<br />

Agilent, 2004, Application Note 5989-0895EN<br />

Schad M, Lipton MS, Giavalisco P, Smith RD and Kehr J<br />

Evaluation of two-dimensional electrophoresis and liquid chromatography-tandem mass<br />

spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.<br />

Electrophoresis, 2005, 26,14: 2729-2738<br />

Schessl J, Zou Y, McGrath MJ, Cowling BS, Maiti B, Chin SS, Sewry C, Battini R, Hu Y, Cottle DL,<br />

Rosenblatt M, Spruce L, Ganguly A, Kirschner J, Judkins AR, Golden JA, Goebel HH, Muntoni F, Flanigan<br />

KM, Mitchell CA and Bönnemann CG<br />

Proteomic identification of FHL1 as the protein mutated in human reducing body myopathy.<br />

J Clin Invest, 2008, 118,3: 904-912<br />

Schütze K, Buchstaller A, Niyaz Y, Melle C, Ernst G, David K, Schlomm T and von Eggeling F<br />

Sample preparation by laser microdissection and catapulting for proteome analysis.<br />

WILEY-VCH Verlag, Weinheim, 2008, Chapter:6.3, 219-234, ISBN-13: 978-3-527-31796-7<br />

Shiotani M, Nakano K, Yamauchi E, Oda Y, Hosokawa S and Aoki T<br />

Proteomic analysis for neuronal vacuolation induced by MK-801 in rat retrosplenial cortex.<br />

J Toxicol Sci, 2011, 36,1: 131-133<br />

Söderberg L, Bogdanovic N, Axelsson B, Winblad B, Näslund J and Tjernberg LO<br />

Analysis of single Alzheimer solid plaque cores by laser capture microscopy and<br />

nanoelectrospray/tandem mass spectrometry.<br />

Biochemistry, 2006, 45: 9849-9856<br />

Steinmetz OM, Sadaghiani S, Panzer U, Krebs C, Meyer-Schwesinger C, Streichert T, Fehr S, Hamming I,<br />

van Goor H, Stahl RAK and Wenzel U<br />

Antihypertensive therapy induces compartment specific chemokine expression and a Th1<br />

immune response in the clipped kidney of Goldblatt hypertensive rats.<br />

Am J Physiol Renal Physiol, 2007, 292,2: F876-887<br />

Stephenson DT, Li Q, Simmons C, Connell MA, Meglasson MD, Merchant K and Emborg ME<br />

Expression of GAD65 and GAD67 immunoreactivity in MPTP-treated monkeys with or without<br />

L-DOPA administration.<br />

Neurobiol Dis, 2005, 20,2: 347-59<br />

Stierum R, Burgemeister R, van Helvoort A, Peijnenburg A, Schütze K, Seidelin M, Vang O and van<br />

Ommen B<br />

Functional foods against colorectal cancer. An example project integrating functional<br />

genomics, nutrition and health.<br />

Nutr Metab Cardiovasc Dis, 2001, 11,4: 94-98<br />

Stingl C, van Vilsteren FG, Guzel C, Ten Kate FJ, Visser M, Krishnadath KK, Bergman JJ and Luider TM<br />

Reproducibility of protein identification of selected cell types in Barrett's esophagus analyzed<br />

by combining laser-capture microdissection and mass spectrometry.<br />

J Proteome Res, 2011, 10,1: 288-298<br />

Tannapfel A, Anhalt K, Häusermann P, Sommerer F, Benicke M, Uhlmann D, Witzigmann H, Hauss J and<br />

Wittekind C<br />

Identification of novel proteins associated with hepatocellular carcinomas using protein microarrays.<br />

J Pathol, 2003, 201: 238-249<br />

October 2012 99/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />

Laser microtools in cell biology and molecular medicine.<br />

Laser Physics, 2003, 13: 681-691<br />

Thiel J, Müller M, Weschke W and Weber H<br />

Amino acid metabolism at the maternal-filial boundary of young barley seeds: a microdissection-based<br />

study.<br />

Umar A, Kang H, Timmermans AM, Look MP, Meijer-van Gelder ME, den Bakker Planta, 2009, 230,1:<br />

205-213<br />

Thiel J, Riewe D, Rutten T, Melzer M, Friedel S, Bollenbeck F, Weschke W, Weber H.<br />

Differentiation of endosperm transfer cells of barley: a comprehensive analysis at the microscale.<br />

Plant J. 2012 Apr 9. doi: 10.1111/j.1365-313X.2012.05018.x. PubMed<br />

Umar A, Luider TM, Foekens JA and Pasa-Tolic LMA, Jaitly N, Martens JW, Luider TM, Foekens JA and<br />

Pasa-Tolić L<br />

Identification of a putative protein profile associated with tamoxifen therapy resistance in<br />

breast cancer.<br />

Mol Cell Proteomics, 2009, 8,6: 1278-1294<br />

Umar A, Luider TM, Foekens JA and Pasa-Tolic L<br />

NanoLC-FT-ICR MS improves proteome coverage attainable for approximately 3000 lasermicrodissected<br />

breast carcinoma cells.<br />

Proteomics. 2007, 7,2: 323-329<br />

Waanders LF, Chwalek K, Monetti M, Kumar C, Lammert E and Mann M<br />

Quantitative proteomic analysis of single pancreatic islets.<br />

PNAS, 2009, 106,45: 18902-18907<br />

Walch A, Komminoth P, Hutzler P, Aubele M, Höfler H and Werner M<br />

Microdissection of tissue sections: Application to the molecular genetic characterization of<br />

premalignant lesions.<br />

Pathobiology, 2000, 68: 9-17<br />

Wang Q, Woltjer RL, Cimino PJ, Pan C, Montine KS. Zhang J and Montine TJ<br />

Proteomic analysis of neurofibrillary tangles in Alzheimer disease identifies GAPDH as a<br />

detergent-insoluble paired helical filament tau binding protein.<br />

FASEB, 2005, 19,7: 869-871<br />

Wehder L, Ernst G, Crecelius A, Guntinas-Lichius O, Melle C, Schubert U and von Eggeling F<br />

Depicting the spatial distribution of proteins in human tumor tissue combining SELDI, MALDI<br />

imaging and immunohistochemistry.<br />

J Histochem Cytochem, 2010, 58,10: 929-937<br />

Wellmann A, Wollscheid V, Lu H, Ma ZL, Albers P, Schütze K, Rhode V, Behrens P, Dreschers S, Ko Y and<br />

Wernert N<br />

Analysis of microdissected prostate tissue with ProteinChip arrays – a way to new insights<br />

into carcinogenesis and to diagnostic tools.<br />

Int J Mol Med, 2002, 9: 341-347<br />

Wellmann A, Rohde V, Rosenwald, A and Augustin AJ<br />

Von Lasern und Chips.<br />

Ophthalmologe, 2001, 98: 1138-1144<br />

Wernert N<br />

Lasermikrodissektion in der molekularen Onkologie des Prostatakarzinoms.<br />

Der Urologe, 2004, 43,6: 646-652<br />

Westphal G, Burgemeister R, Friedemann G, Wellmann A, Wernert N, Wollscheid V, Becker B, Vogt T,<br />

Knüchel R, Stolz W and Schütze K<br />

Noncontact Laser Catapulting: A basic procedure for functional genomics and proteomics.<br />

Conn M (ed): Laser capture microscopy and microdissection, Methods in Enzymology, 2002, 356,<br />

Chapter 8: 80-99<br />

October 2012 100/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Wi niewski JR, Ostasiewicz P and Mann M<br />

High recovery FASP applied to the proteomic analysis of microdissected formalin fixed paraffin<br />

embedded cancer tissues retrieves known colon cancer markers.<br />

J Proteome Res. 2011, 10,7: 3040-3049<br />

Zhang Y, Ye Y, Shen D, Jiang K, Zhang H, Sun W, Zhang J, Xu F, Cui Z and Wang S<br />

Identification of transgelin-2 as a biomarker of colorectal cancer by laser capture<br />

microdissection and quantitative proteome analysis.<br />

Cancer Sci, 2010, 101,2: 523-529<br />

1.4 Live Cell Handling<br />

Von Bally G, Kemper B, <strong>Carl</strong> D, Knoche S, Kempe M, Dietrich C, Stutz M, Wolleschenksky R, Schütze K,<br />

Stich M, Buchstaller A, Irion K, Beuthan J, Gersonde I and Schnekenburger J<br />

New Methods for marker-free live cell and tumour analysis (Mikroso).<br />

In: Popp J, Strehle M (eds.): Biophotonics. Visions for a better Health Care. Wiley. 2006: 301-360<br />

Bekker-Jensen S, Lukas C, Melander F, Bartek J and Lukas J<br />

Dynamic assembly and sustained retention of 53BP1 at the sites of DNA damage are controlled<br />

by Mdc1/NFBD1.<br />

J Cell Biol, 2005, 170,2: 201-211<br />

Bowen C and Gelmann EP<br />

NKX3.1 activates cellular response to DNA damage.<br />

Cancer Res, 2010, 70,8: 3089-3097<br />

Brierley SM, Castro J, Harrington AM, Hughes PA, Page AJ, Rychkov GY and Blackshaw LA<br />

TRPA1 contributes to specific mechanically activated currents and sensory neuron mechanical<br />

hypersensitivity.<br />

J Physiol, 2011, 589: 3575-3593<br />

Burgemeister R, Hitzler H, Hoyer C and Ankerhold R<br />

Noncontact laser microdissection: a new dimension in life science.<br />

Nature Methodes, 2006, Application Notes<br />

Burgemeister R<br />

New aspects of laser microdissection in research and routine.<br />

J Histochem Cytochem, 2005, 53,3: 409-412<br />

Burgemeister R and Stich M<br />

Laser mediated live cell handling: Detection, selection and collection of single live cells by<br />

Laser Microdissection and Pressure Catapulting (LMPC).<br />

Zellbiologie aktuell, 2004, 30. Jahrgang, Ausgabe 1: 23-24<br />

Chaudhary KW, Barrezueta NX, Bauchmann MB, Milici AJ, Beckius G, Stedman DB, Hambor JE, Blake WL,<br />

McNeish JD, Bahinski A and Cezar GG<br />

Embryonic stem cells in predictive cardiotoxicity: Laser Capture Microscopy enables assay<br />

development.<br />

Toxicol Sci, 2006, 90,1: 149-158<br />

Dahse R and Kosmehl H<br />

Cell separation and gene expression analysis in a tumor-stroma interaction model.<br />

Image Anal Stereol, 2004, 23: 153-157<br />

Delgado-Calle J, Sañudo C, Bolado A, Fernández AF, Arozamena J, Pascual-Carra MA, Rodriguez-Rey JC,<br />

Fraga MF, Bonewald L, Riancho JA.<br />

DNA methylation contributes to the regulation of sclerostin expression in human osteocytes.<br />

J Bone Miner Res. 2012 Apr;27(4):926-37. doi: 10.1002/jbmr.1491. PubMed<br />

Delgado-Calle J, Sañudo C, Sánchez-Verde L, García-Renedo RJ, Arozamena J and Riancho JA<br />

Epigenetic regulation of alkaline phosphatase in human cells of the osteoblastic lineage.<br />

Bone, 2011, 49,4: 830-838<br />

October 2012 101/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Demir O, Aysit N, Onder Z, Turkel N, Ozturk G, Sharrocks AD and Kurnaz IA<br />

ETS-domain transcription factor Elk-1 mediates neuronal survival: SMN as a potential target.<br />

Biochim Biophys Acta, 2011, 1812,6: 652-662<br />

Duan Y, Catana A, Meng Y, Yamamoto N, He S, Gupta S, Gambhir SS and Zern MA<br />

Differentiation and enrichment of hepatocyte-like cells from human embryonic stem cells in<br />

vitro and in vivo.<br />

Stem Cells, 2007, 25,12: 3058-3068<br />

Foteinos G, Hu Y, Xiao Q, Metzler B and Xu Q<br />

Rapid endothelial turnover in atherosclerosis-prone areas coincides with stem cell repair in<br />

apolipoprotein E-deficient mice.<br />

Circulation, 2008, 117,14: 1856-1863<br />

Friedemann G<br />

Live cells from cell culture: Direct isolation of poly-A(+) mRNA from individual laser<br />

microdissected cell samples obtained with the PALM MicroBeam System.<br />

PALM, 2004, Application Note, 1-3<br />

Grab DJ, Garcia-Garcia JC, Nikolskaia OV, Kim YV, Brown A, Pardo CA, Zhang Y, Becker KG, Wilson BA,<br />

de A Lima AP, Scharfstein J and Dumler JS<br />

Protease activated receptor signaling is required for african trypanosome traversal of human<br />

brain microvascular endothelial cells.<br />

PLoS Negl Trop Dis, 2009, 3,7: e479<br />

Hijjawi NS, Meloni BP, Ryan UM, Olson ME and Thompson RCA<br />

Successful in vitro cultivation of Cryptosporidium andersoni: evidence for the existence of<br />

novel extracellular stages in the life cycle and implications for the classification of<br />

Cryptosporidium.<br />

Int J Parasitol, 2002, 32: 1719-1726<br />

Langer S, Geigl JB, Ehnle S, Gangnus R, Speicher MR<br />

Live cell catapulting and recultivation does not change the karyotype of HCT116 tumor cells.<br />

Cancer Genet Cytogenet, 2005, 161,2: 174-177<br />

Lee JY, Jones C, Zern MA and Revzin A<br />

Analysis of local tissue-specific gene expression in cellular micropatterns.<br />

Anal Chem. 2006, 78,24: 8305-12.<br />

Lukas C, Melander F, Stucki M, Falck J, Bekker-Jensen S, Goldberg M, Lerenthal Y, Jackson SP, Bartek J<br />

and Lukas J<br />

Mdc1 couples DNA double-strand break recognition by Nbs1 with its H2AX-dependent<br />

chromatin retention.<br />

EMBO J, 2004, supplement. inf.1, 23: 2674-2683<br />

Lukas C, Falck J, Bartkova J, Bartek J and Lukas J<br />

Distinct spatiotemporal dynamics of mammalian checkpoint regulators induced by DNA<br />

damage.<br />

Nat Cell Biol, 2003, 5,3: 255-260<br />

Mayer A, Stich M, Brocksch D, Schütze K and Lahr G<br />

Going in vivo with laser-microdissection.<br />

Methods Enzymol, 2002, 356: 25-33<br />

Méry A, Aimond F, Ménard C, Mikoshiba K, Michalak M and Pucéat M<br />

Initiation of embryonic cardiac pacemaker activity by inositol 1,4,5-triphosphate-dependent<br />

calcium signaling.<br />

Mol Biol Cell, 2005, 16: 2414-2423<br />

Mortusewicz O, Schermelleh L, Walter J, Cardoso MC and Leonhardt H<br />

Recruitment of DNA methyltransferase I to DNA repair sites.<br />

PNAS, 2005, 102,25: 8905-8909<br />

October 2012 102/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Niyaz Y, Stich M, Sägmüller B, Burgemeister R, Friedemann G, Sauer U, Gangnus R and Schütze K<br />

Noncontact Laser Microdissection and Pressure Catapulting: Sample preparation for genomic,<br />

transcriptomic and proteomic analysis.<br />

Microarrays in Clinical Diagnostics in Methods in Molecular Medicine, 2005, 114: 1-24 (ed. Joos T and<br />

Fortina P)<br />

Niyaz Y and Lahr G<br />

Non-contact Laser Microdissection and Catapulting.<br />

Business briefings, Future Drug Discovery, 2004: 93-98<br />

Pajcini KV, Corbel SY, Sage J, Pomerantz JH and Blau HM<br />

Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian<br />

muscle.<br />

Cell Stem Cell, 2010, 7,2: 198-213<br />

Patterson-Fortin J, Shao G, Bretscher H, Messick TE and Greenberg RA<br />

Differential regulation of jamm domain deubiquitinating enzyme activity within the rap80<br />

complex.<br />

J Biol Chem, 2010, 285,40: 30971-30981<br />

Petzold A, Tisdall MM, Girbes AR, Martinian L, Thom M, Kitchen N and Smith M<br />

In vivo monitoring of neuronal loss in traumatic brain injury: a microdialysis study.<br />

Brain, 2011, 134: 464-483<br />

Schütze K, Niyaz Y, Stich M and Buchstaller A<br />

Noncontact laser microdissection and catapulting for pure sample capture.<br />

Methods Cell Biol, 2007, 82: 649-673<br />

Schütze K, Burgemeister R, Clement-Sengewald A, Ehnle S, Friedemann G, Lahr G, Sägmüller B, Stich M<br />

and Thalhammer S<br />

Non-contact live cell laser micromanipulation using PALM � MicroLaser Systems.<br />

PALM, 2003, Scientific Edition No.11<br />

Seitz G, Warmann SW, Fuchs J, Mau-Holzmann UA, Ruck P, Heitmann H, Hoffman RM, Mahrt J, Müller GA<br />

and Wessels JT<br />

Visualization of xenotransplanted human rhabdomyosarcoma after transfection with red<br />

fluorescent protein.<br />

J Pediatr Surg, 2006, 41,8: 1369-1376<br />

Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M,<br />

Cremer T and Goldman RD<br />

The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization<br />

and transcription.<br />

Genes Dev, 2008, 22,24: 3409-3421<br />

Steigemann P, Wurzenberger C, Schmitz MH, Held M, Guizetti J, Maar S and Gerlich DW<br />

Aurora B-mediated abscission checkpoint protects against tetraploidization.<br />

Cell, 2009, 136,3: 473-484<br />

Stich M, Thalhammer S, Burgemeister R, Friedemann G, Ehnle S, Lüthy C and Schütze K<br />

Live cell catapulting and recultivation.<br />

Pathol Res Pract, 2003, 199: 405-409<br />

Stich M, Thalhammer S, Burgemeister R and Schütze K<br />

Laser micromanipulation of living cells.<br />

Reprinted from: 15 th World Congress of the International Society for Laser Surgery and Medicine, Munich<br />

(Germany), June 25-27. 2003, Monduzzi Editore, 2003: 51-55<br />

Stybayeva G, Zhu H, Ramanculov E, Dandekar S, George M and Revzin A<br />

Micropatterned co-cultures of T-lymphocytes and epithelial cells as a model of mucosal<br />

immune system.<br />

Biochem Biophys Res Commun, 2009, 380,3: 575-580<br />

Tashiro S, Walter J, Shinohara A, Kamada N and Cremer T<br />

Rad51 Accumulation at sites of DNA damage and in postreplicative chromatin.<br />

J Cell Biol, 2000, 150,2: 283-291<br />

October 2012 103/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />

Laser microtools in cell biology and molecular medicine.<br />

Laser Physics, 2003, 13: 681-691<br />

Ukawala M, Chaudhari K, Rajyaguru T, Manjappa AS, Murthy RS, Gude R.<br />

Laminin receptor-targeted etoposide loaded polymeric micelles: a novel approach for the<br />

effective treatment of tumor metastasis.<br />

J Drug Target. 2012 Jan;20(1):55-66. PubMed PMID: 21967151. PubMed<br />

Ziegler L, Segal-Ruder Y, Coppola G, Reis A, Geschwind D, Fainzilber M and Goldstein RS<br />

A human neuron injury model for molecular studies of axonal regeneration.<br />

Exp Neurol, 2010, 223,1: 119-127<br />

1.5 Reproductive Medicine<br />

Buchholz T and Clement-Sengewald A<br />

Möglichkeiten und Grenzen der Polkörperchendiagnostik.<br />

Reproduktionsmedizin, 2000, 16: 343-353<br />

Burgemeister R, Schütze K, Minderer S and Gloning KP<br />

Single fetal cells separated by the Laser MicroBeam Technique.<br />

BIOforum Int, 1999, 3: 119-121<br />

Choolani M, Mahyuddin AP, Hahn S.<br />

The promise of fetal cells in maternal blood.<br />

Best Pract Res Clin Obstet Gynaecol. 2012 Oct;26(5):655-67. PubMed<br />

Clement-Sengewald A, Buchholz T and Schütze K, Berg U and Berg FD<br />

Noncontact, laser-mediated extraction of polar bodies for prefertilization genetic diagnosis.<br />

J Assist Reprod Gen, 2002, 19,4: 183-194<br />

Clement-Sengewald A, Buchholz T and Schütze K<br />

Laser microdissection as a new approach to prefertilization genetic diagnosis.<br />

Pathobiology, 2000, 68: 232-236<br />

Clement-Sengewald A, Schütze K, Sandow S, Nevinny C and Pösl H<br />

PALM Robot-MicroBeam for laser-assisted fertilization, embryo hatching and single-cell<br />

prenatal diagnosis.<br />

Wyss P, Tadir Y, Tromberg BJ, Haller U (eds): Photomedicine in Gynecology and Reproduction. Basel,<br />

Karger, 2000: 340-351<br />

Clement-Sengewald A, Schütze K, Ashkin A, Palma GA, Kerlen G and Brem G<br />

Animal experimentation: Fertilization of bovine oocytes induced solely with combined laser<br />

microbeam and optical tweezers.<br />

J Assist Reprod Gen, 1996, 13: 259-265<br />

Clement-Sengewald A, Schütze K, Heinze A, Palma GA, Pösl H and Brem G<br />

Laser assisted cell fusion and cytoplast transfer in early mammalian embryos.<br />

Proceedings of the International Society for Optical Engineering; Lasers in Otolaryngology, Dermatology<br />

and Tissue Welding. SPIE 1993, 1876: 187-194<br />

Enginsu ME, Schütze K, Bellanca S, Pensis M, Campo R, Bassil S, Donnez J and Gordt S<br />

Micromanipulation of mouse gametes with laser microbeam and optical tweezers.<br />

Hum Reprod, 1995, 10: 1761-1764<br />

de Groot CJ, Steegers-Theunissen RP, Guzel C, Steegers EA and Luider TM<br />

Peptide patterns of laser dissected human trophoblasts analyzed by matrix-assisted laser<br />

desorption/ionisation-time of flight mass spectrometry.<br />

Proteomics, 2005, 5: 597-607<br />

Hahn S and Holzgreve W<br />

Prenatal Diagnosis using fetal cells and cell-free fetal DNA in maternal blood: what is currently<br />

feasible?<br />

Clin Obstet Gynecol, 2002, 45,3: 649-656<br />

October 2012 104/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Hahn S, Zhong XY, Troeger C, Burgemeister R, Gloning K and Holzgreve W<br />

Current applications of single-cell PCR.<br />

CMLS Cell Mol Life Sci, 2000, 57: 96-105<br />

Kolialexi A, Vrettou C, Traeger-Synodinos J, Burgemeister R, Papantoniou N, Kanavakis E, Antsaklis A and<br />

Mavrou A<br />

Noninvasive prenatal diagnosis of beta-thalassaemia using individual fetal erythroblasts<br />

isolated from maternal blood after enrichment.<br />

Prenat Diagn, 2007, 27,13: 1228-1232<br />

Lee SD, Kim MR, Hwang PG, Shim SS, Yoon BH and Kim CJ<br />

Chorionic plate vessels as an origin of amniotic fluid neutrophils.<br />

Pathol Int, 2004, 54: 516-522<br />

Liow SL , Bongso A and Ng SC<br />

Fertilization, embryonic development and implantation of mouse oocytes with one or two<br />

laser-drilled holes in the zona, and inseminated at different sperm concentrations.<br />

Hum Reprod, 1996, 11,6: 1273-1280<br />

Liow SL, Ng SC, Vasuthevan S, Tok V, Bongso A and Ratnam SS<br />

Laser zona cutting of mouse oocytes.<br />

Theriogenology, 1994, 41: 239<br />

Mantzaris D, Cram D, Healy C, Howlett D and Kovacs G<br />

Preliminary report: Correct diagnosis of sex in fetal cells isolated from cervical mucus during<br />

early pregnancy.<br />

Aust N Z J Obstet Gynaecol, 2005, 45,6: 529-532<br />

Ng SC, Liow SL Schütze K, Vasuthevan S, Bongso A and Ratnam SS<br />

The use of ultra-violet microbeam laser for laser zona dissection in the mouse.<br />

J Assist Reprod Gen, 1993, Suppl 10: 204<br />

Peters DD, Marschall S, Mahabir E, Boersma A, Heinzmann U, Schmidt J and Hrabé de Angelis M<br />

Risk assessment of mouse hepatitis virus infection via in vitro fertilization and embryo<br />

transfer by the use of zona-intact and laser-microdissected oocytes.<br />

Biol Reprod, 2006, 74: 246-252<br />

Schütze K, Böhm M, Thalhammer S and Pösl H<br />

Laser Mikroablation für die Genanalyse auf Einzelzellbasis.<br />

BIOforum, 1997, 20: 82-87<br />

Schütze K, Clement-Sengewald A and Berg FD<br />

“Non-contact“ laser micromanipulation of gametes and embryos. Part I: The UV-laser<br />

microbeam. Part II: IR-optical tweezers trap.<br />

Hum Reprod Update, 1995, 1,1<br />

Schütze K, Clement-Sengewald A and Ashkin A<br />

Zona drilling and sperm insertion with combined laser microbeam and optical tweezers.<br />

Fertil and Steril, 1994, 61,4: 783-786<br />

Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />

Laser microtools in cell biology and molecular medicine.<br />

Laser Physics, 2003, 13: 681-691<br />

1.6 Chromosomes<br />

Aleksic K, Lackner C, Geigl JB, Schwarz M, Auer M, Ulz P, Fischer M, Trajanoski Z, Otte M and Speicher<br />

MR<br />

Evolution of genomic instability in diethylnitrosamine-induced hepatocarcinogenesis in mice.<br />

Hepatology, 2011, 53,3: 895-904<br />

October 2012 105/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Aubele MM, Cummings MC, Mattis AE, Zitzelsberger HF, Walch AK, Kremer M, Höfler H and Werner M<br />

Accumulation of chromosomal imbalances from intraductal proliferative lesions to adjacent in<br />

situ and invasive ductal breast cancer.<br />

Diagn Mol Pathol, 2000, 9,1: 14-19<br />

Aubele M, Cummings M, Walch A, Zitzelsberger H, Nahrig J, Höfler H and Werner M<br />

Heterogeneous chromosomal aberrations in intraductal breast lesions adjacent to invasive<br />

carcinoma.<br />

Anal Cell Pathol, 2000, 20,1: 17-24<br />

Aubele M, Mattis A, Zitzelsberger H, Walch A, Kremer M, Welzl G, Höfler H and Werner M<br />

Extensive ductal carcinoma in situ with small foci of invasive ductal carcinoma: evidence of<br />

genetic resemblance by CGH.<br />

Int J Cancer, 2000, 85: 82-86<br />

Balogh Z, Reiniger L, Rajnai H, Csomor J, Szepesi A, Balogh A, Deák L, Gagyi E, Bödör C and Matolcsy A<br />

High rate of neoplastic cells with genetic abnormalities in proliferation centers of chronic<br />

lymphocytic leukemia.<br />

Leuk Lymphoma, 2011, 52,6: 1080-1084<br />

Cañueto J, Santos-Briz A, García JL, Robledo C and Unamuno P<br />

Onychomatricoma: Genome-wide analyses of a rare nail matrix tumor.<br />

J Am Acad Dermatol, 2010, in press<br />

Cernohorska H, Kubickova S, Vahala J, Rubes J.<br />

Molecular Insights into X;BTA5 Chromosome Rearrangements in the Tribe Antilopini<br />

(Bovidae).<br />

Cytogenet Genome Res. 2012 Feb 11. [Epub ahead of print] PubMed<br />

Cernohorska H, Kubickova S, Vahala J, Robinson TJ and Rubes J<br />

Cytotypes of Kirk's dik-dik (Madoqua kirkii,Bovidae) show multiple tandem fusions.<br />

Cytogenet Genome Res, 2011, 132,4: 255-263<br />

Cremer M, Schütze K, Scherthan H, Goering F and Cremer T<br />

Collection of individual chromosomes and nuclear segments by laser microdissection and laser<br />

pressure catapulting.<br />

Med Gen, 1998, 1: 100, Abstract<br />

Di Berardino D, Vozdova M, Kubičková S, Cernohorska H, Coppola G, Coppola G, Enne G and Rubes J<br />

Sexing river buffalo (Bubalus bubalis L.), sheep (Ovis aries L.), goat (Capra hircus L.), and<br />

cattle spermatozoa by double color FISH using bovine (Bos Taurus L.) X- and Y-painting<br />

probes.<br />

Mol Reprod Dev, 2004, 67: 108-115<br />

Drosopoulou E, Nakou I, Síchová J, Kubíčková S, Marec F, Mavragani-Tsipidou P<br />

Sex chromosomes and associated rDNA form a heterochromatic network in the polytene nuclei<br />

of Bactrocera oleae (Diptera: Tephritidae).<br />

Genetica. 2012 Jul 24. PubMed<br />

Fiegler H, Geigl JB, Langer S, Rigler D, Porter K, Unger K, Carter NP and Speicher MR<br />

High resolution array-CGH analysis of single cells.<br />

Nucleic Acids Res, 2007, 35,3: e15<br />

Fominaya A; Linares C, Loarce Y and Ferrer E<br />

Microdissection and microcloning of plant chromosomes.<br />

Cytogenet Genome Res, 2005, 109: 8-14<br />

Fuková I, Traut W, Vitková M, Nguyen P, Kubičková S and Marec F<br />

Probing the W chromosome of the codling moth, Cydia pomonella, with sequences from microdissected<br />

sex chromatin.<br />

Chromosoma, 2007, 116,2: 135-145<br />

Geigl JB, Obenauf AC, Waldispuehl-Geigl J, Hoffmann EM, Auer M, Hörmann M, Fischer M, Trajanoski Z,<br />

Schenk MA, Baumbusch LO and Speicher MR<br />

Identification of small gains and losses in single cells after whole genome amplification on<br />

tiling oligo arrays.<br />

Nucleic Acids Res, 2009, 37,15: e105<br />

October 2012 106/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Geigl JB and Speicher MR<br />

Single-cell isolation from cell suspensions and whole genome amplification from single cells to<br />

provide templates for CGH analysis.<br />

Nat Protoc, 2007, 2,12: 3173-3184<br />

Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, Save V, O'Donovan M, Eijk PP, Alderson D, Ylstra B,<br />

Caldas C and Fitzgerald RC<br />

Integrative analysis of array-comparative genomic hybridisation and matched gene expression<br />

profiling data reveals novel genes with prognostic significance in oesophageal<br />

adenocarcinoma.<br />

Gut, 2011, 60,10: 1317-1326<br />

Gotter AL, Nimmakayalu MA, Jalali GR, Hacker AM, Vorstman J, Conforto Duffy D,<br />

Medne L and Emanuel BS<br />

A palindrome-driven complex rearrangement of 22q11.2 and 8q24.1 elucidated using novel<br />

technologies.<br />

Genome Res, 2007, 174: 470-481<br />

Green AR, Krivinskas S, Young P, Rakha EA, Paish EC, Powe DG and Ellis IO<br />

Loss of expression of chromosome 16q genes DPEP1 and CTCF in lobular carcinoma in situ of<br />

the breast.<br />

Breast Cancer Res Treat, 2009, 113,1: 59-66<br />

Hahtola S, Burghart E, Jeskanen L, Karenko L, Abdel-Rahman WM, Polzer B, Kajanti M, Peltomäki P,<br />

Pettersson T, Klein CA and Ranki A<br />

Clinicopathological characterization and genomic aberrations in subcutaneous panniculitis-like<br />

T-cell lymphoma.<br />

J Invest Dermatol, 2008, 128,9: 2304-2309<br />

Hartmann S, Martin-Subero JI, Gesk S, Hüsken J, Giefing M, Nagel I, Riemke J, Chott A, Klapper W,<br />

Parrens M, Merlio JP, Küppers R, Bräuninger A, Siebert R and Hansmann ML<br />

Detection of genomic imbalances in microdissected Hodgkin and Reed-Sternberg cells of<br />

classical Hodgkin's lymphoma by array-based comparative genomic hybridization.<br />

Haematologica, 2008, 93,9: 1318-1326<br />

Hartmann A, Schlake G, Zaak D, Hungerhuber E, Hofstetter A, Hofstaedter F and Knuechel R<br />

Occurrence of chromosome 9 and p53 alterations in multifocal dysplasia and carcinoma In Situ<br />

of human urinary bladder.<br />

Cancer Res, 2002, 62: 809-818<br />

Hartmann A, Rösner U, Schlake G, Dietmaier W, Zaak D, Hofstaedter F and Knuechel R<br />

Clonality and genetic divergence in multifocal low-grade superficial urothelial carcinoma as<br />

determined by chromosome 9 and p53 deletion analysis.<br />

Lab Invest, 2000, 80,5: 709-718<br />

Hobza R, Lengerova M, Cernohorska H, Rubes J and Vyskot B<br />

FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex<br />

chromosomes of Silene latifolia.<br />

Chromosome Res, 2004, 12,3: 245-250<br />

Koene GPJ, Arts-Hilkes YHA, van der Ven KJW, Rozemuller EH, Slootweg PJ, de Weger RA and Tilanus MG<br />

High level of chromosome 15 aneuploidy in head and neck squamous cell carcinoma lesions<br />

identified by FISH analysis: limited value of ß2-microglobulin LOH analysis.<br />

Tissue Antigens, 2004, 64: 452-461<br />

Kopecna O, Kubickova S, Cernohorska H, Cabelova K, Vahala J, Rubes J.<br />

Isolation and comparison of tribe-specific centromeric repeats within Bovidae.<br />

J Appl Genet. 2012 Jan 17. [Epub ahead of print] PubMed<br />

October 2012 107/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Krylov V, Kubickova S, Rubes J, Macha J, Tlapakova T, Seifertova E and Sebkova N<br />

Preparation of Xenopus tropicalis whole chromosome painting probes using laser<br />

microdissection and reconstruction of X. laevis tetraploid karyotype by Zoo-FISH.<br />

Chromosome Res, 2010, 18,4: 431-439<br />

Kubičková S, Cernohorska H, Musilova P and Rubes J<br />

The use of laser microdissection for the preparation of chromosome-specific painting probes in<br />

farm animals.<br />

Chromosome Res, 2002, 10: 571-577<br />

Langer S, Geigl JB, Gangnus R and Speicher MR<br />

Sequential application of interphase-FISH and CGH to single cells.<br />

Lab Invest, 2005, 85,4: 582-592<br />

Langer S, Geigl JB, Ehnle S, Gangnus R, Speicher MR<br />

Live cell catapulting and recultivation does not change the karyotype of HCT116 tumor cells.<br />

Cancer Genet Cytogenet, 2005, 161,2: 174-177<br />

Lau CS, Yu CB, Wong HK, Fan DS, Mak HT, Wong KW, Lam DS, Pang CP and Choy KW<br />

Allelic imbalance at 13q31 is associated with reduced GPC6 in Chinese with sporadic<br />

retinoblastoma.<br />

Br J Ophthalmol, 2010, 94,3: 357-363<br />

Louzada S, Paço A, Kubickova S, Adega F, Guedes-Pinto H, Rubes J and Chaves R<br />

Different evolutionary trails in the related genomes Cricetus cricetus and Peromyscus<br />

eremicus (Rodentia, Cricetidae) uncovered by orthologous satellite DNA repositioning.<br />

Micron, 2008, 39,8: 1149-1155<br />

Luebke AM, Schlomm T, Gunawan B, Bonkhoff H, Füzesi L and Erbersdobler A<br />

Simultaneous tumour-like, atypical basal cell hyperplasia and acinar adenocarcinoma of the<br />

prostate: a comparative morphological and genetic approach.<br />

Virchows Archiv, 2005, 446,3: 338-341<br />

Mathiesen RR, Fjelldal R, Liestøl K, Due EU, Geigl JB, Riethdorf S, Borgen E, Rye IH, Schneider IJ,<br />

Obenauf AC, Mauermann O, Nilsen G, Christian Lingjaerde O, Børresen-Dale AL, Pantel K, Speicher MR,<br />

Naume B, Baumbusch LO.<br />

High-resolution analyses of copy number changes in disseminated tumor cells of patients with<br />

breast cancer.<br />

Int J Cancer. 2011 Sep 20. doi: 10.1002/ijc.26444. PubMed<br />

Matsunaga S, Kawano S, Michimoto T, Higashiyama T, Nakao S, Sakai A and Kuroiwa T<br />

Semi-automatic laser beam microdissection of the Y chromosome and analysis of Y<br />

chromosome DNA in a diocious plant, Silene latifolia.<br />

Plant Cell Physiol, 1999, 40,1: 60-68<br />

McNally LR, Henk WG, Cooper RK<br />

Laser pressure catapulting followed by B actin gene identification in Japanese quail<br />

macrochromosomes and microchrosomosomes using Teflon-coated coverslip slides.<br />

J Microsc, 2005, 218: 219-224<br />

Musilova P, Kubickova S, Zrnova E, Horin P, Vahala J and Rubes J<br />

Karyotypic relationships among Equus grevyi, Equus burchelli and domestic horse defined<br />

using horse chromosome arm-specific probes.<br />

Chromosome Res, 2007, 15,6: 807-813<br />

Obenauf AC, Schwarzbraun T, Auer M, Hoffmann EM, Waldispuehl-Geigl J, Ulz P, Günther B, Duba HC,<br />

Speicher MR and Geigl JB<br />

Mapping of balanced chromosome translocation breakpoints to the basepair level from<br />

microdissected chromosomes.<br />

J Cell Mol Med, 2010, 14,8: 2078-2084<br />

Obermann EC, Junker K, Stoehr R, Dietmaier W, Zaak D, Schubert J, Hofstaedter F, Knuechel R and<br />

Hartmann A<br />

Frequent genetic alterations in flat urothelial hyperplasias and concomitant papillary bladder<br />

cancer as detected by CGH, LOH, and FISH analyses.<br />

J Pathol, 2003, 199: 50-57<br />

October 2012 108/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Pyakurel P, Montag U, Castaños-Vélez E, Kaaya E, Christensson B, Tönnies H, Biberfeld P and Heiden T<br />

CGH of microdissected Kaposi's sarcoma lesions reveals recurrent loss of chromosome Y in<br />

early and additional chromosomal changes in late tumour stages.<br />

Aids, 2006, 20: 1805-1812<br />

Ráb P, Rábová M, Pereira CS, Collares-Pereira MJ and Pelikánová S<br />

Chromosome studies of European cyprinid fishes: interspecific homology of leuciscine<br />

cytotaxonomic marker-the largest subtelocentric chromosome pair as revealed by crossspecies<br />

painting.<br />

Chromosome Res, 2008, 16,6: 863-873<br />

Raffegerst SH, Hoelzlwimmer G, Kunder S, Mysliwietz J, Quintanilla-Martinez L and Schendel DJ<br />

Diverse hematological malignancies including hodgkin-like lymphomas develop in chimeric<br />

MHC class II transgenic mice.<br />

PLoS One, 2009, 4,12: 1-12<br />

Rezácová O, Kubickova S, Cernhorska H and Rubes J<br />

Comparison of spontaneous background genomic aberration frequencies among cattle, pig and<br />

humans using dual-colored FISH.<br />

Chromosome Res, 2003: 715-724<br />

Rubes J, Pagacova E, Kopecna O, Kubickova S, Cernohorska H, Vahala and Di Berardino D<br />

Karyotype, centric fusion polymorphism and chromosomal aberrations in captive-born<br />

mountain reedbuck (Redunca fulvorufula).<br />

Cytogenet Genome Res, 2007, 116,4: 263-268<br />

Rubes J, Kubickova S, Pagacova E, Cernohorska H, Di Berardino D, Antoninova M, Vahala J and Robinson<br />

TJ<br />

Phylogenomic study of spiral-horned antelope by cross-species chromosome painting.<br />

Chromosome Res, 2008, 16,7: 935-947<br />

Rubes J, Kubickova S, Musilova P, Amaral EM, Brunner RM and Goldammer T<br />

Assignment of chromosome rearrangements between X chromosomes of human and cattle by<br />

laser microdissection and zoo-FISH.<br />

Chromosome Res, 2005, 13,6: 569-574<br />

Sanz MJ, Loarce Y, Ferrer E, Fominaya A.<br />

Use of tyramide-fluorescence in situ hybridization and chromosome microdissection for<br />

ascertaining homology relationships and chromosome linkage group associations in oats.<br />

Cytogenet Genome Res. 2012;136(2):145-56. PubMed<br />

Schermelleh L, Thalhammer S, Heckl W, Pösl H, Cremer T, Schütze K and Cremer M<br />

Laser microdissetion and laser pressure catapulting for the generation of chromosome-specific<br />

paint probes.<br />

BioTechniques, 1999, 27: 362-367<br />

Schmidt A, Schmitz R, Giefing M, Martin-Subero JI, Gesk S, Vater I, Massow A, Maggio E, Schneider M,<br />

Hansmann ML, Siebert R and Küppers R<br />

Rare occurrence of biallelic CYLD gene mutations in classical Hodgkin lymphoma.<br />

Genes Chromosomes Cancer, 2010, 49,9: 803-809<br />

Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M,<br />

Cremer T and Goldman RD<br />

The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization<br />

and transcription.<br />

Genes Dev, 2008, 22,24: 3409-3421<br />

Stark RW, Rubio-Sierra FJ, Thalhammer S and Heckl WM<br />

Combined nanomanipulation by atomic force microscopy and UV-laser ablation for<br />

chromosomal dissection.<br />

Eur Biophys J, 2003, 32: 33-39<br />

Thalhammer S, Langer S, Speicher MR, Heckl WM and Geigl JB<br />

Generation of chromosome painting probes from single chromosomes by laser microdissection<br />

and linker-adaptor PCR.<br />

Chromosome Res, 2004, 12: 337-343<br />

October 2012 109/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Thalhammer S, Stark RW and Schütze K<br />

Laser microdissection of metaphase chromosomes and characterization by atomic force<br />

microscopy.<br />

J Biomed Optics, 1997, 2,1: 115-119´<br />

Vandewoestyne M, Kumps C, Swerts K, Menten B, Lammens T, Philippé J, De Preter K, Laureys G, Van<br />

Roy N, Speleman F and Deforce D<br />

Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment<br />

risk assessment by array comparative genomic hybridization.<br />

Int J Cancer, 2011, in press<br />

Vozdova M, Kubickova S, Cernohorska H and Rubes J<br />

Detection of translocation rob(1;29) in bull sperm using a specific DNA probe.<br />

Cytogenet Genome Res, 2008, 120,1-2: 102-105<br />

Weckermann D, Polzer B, Ragg T, Blana A, Schlimok G, Arnholdt H, Bertz S, Harzmann R and Klein CA<br />

Perioperative activation of disseminated tumor cells in bone marrow of patients with prostate<br />

cancer.<br />

J Clin Oncol, 2009, 27,10: 1549-1556<br />

Werner M, Mattis A, Aubele M, Cummings M, Zitzelsberger H, Hutzler P and Höfler H<br />

20q13.2 amplification in intraductal hyperplasia adjacent to in situ and invasive ductal<br />

carcinoma of the breast.<br />

Virchows Arch, 1999, 435,5: 469-472<br />

1.7 Plant Research<br />

Angeles G, Berrio-Sierra J, Joseleau JP, Lorimier P, Lefèbvre A and Ruel K<br />

Preparative laser capture microdissection and single-pot cell wall material preparation: a<br />

novel method for tissue-specific analysis.<br />

Planta, 2006, 224,1: 228-232<br />

Berthet S, Demont-Caulet N, Pollet B, Bidzinski P, Cézard L, Le Bris P, Borrega N, Hervé J, Blondet E,<br />

Balzergue S, Lapierre C and Jouanin L<br />

Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of<br />

Arabidopsis thaliana stems.<br />

Plant Cell, 2011, 23,3: 1124-1137<br />

Borisjuk L, Rolletschek H, Neuberger T.<br />

Surveying the plant's world by magnetic resonance imaging.<br />

Plant J. 2012 Apr;70(1):129-46. doi: 10.1111/j.1365-313X.2012.04927.x. PubMed<br />

Brooks L 3rd, Strable J, Zhang X, Ohtsu K, Zhou R, Sarkar A, Hargreaves S, Elshire RJ, Eudy D,<br />

Pawlowska T, Ware D, Janick-Buckner D, Buckner B, Timmermans MC, Schnable PS, Nettleton D and<br />

Scanlon MJ<br />

Microdissection of shoot meristem functional domains.<br />

PLoS Genet, 2009, 5,5: e1000476<br />

Connolly C<br />

Laser ablation reveals sexual attraction mechanism in flowers.<br />

Biophot Int, 2001, 8,9: 61-63<br />

Corea OR, Ki C, Cardenas CL, Kim SJ, Brewer SE, Patten AM, Davin LB, Lewis NG.<br />

Arogenate dehydratase isoenzymes profoundly and differentially modulate carbon<br />

flux into lignins.<br />

J Biol Chem. 2012 Mar 30;287(14):11446-59. PubMed PMID: 22311980. PubMed<br />

Damiani I, Baldacci-Cresp F, Hopkins J, Andrio E, Balzergue S, Lecomte P, Puppo A, Abad P, Favery B,<br />

Hérouart D.<br />

Plant genes involved in harbouring symbiotic rhizobia or pathogenic nematodes.<br />

New Phytol. 2012 Apr;194(2):511-22. doi: 10.1111/j.1469-8137.2011.04046.x. PubMed<br />

October 2012 110/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Deeken R, Ache P, Kajahn I, Klinkenberg J, Bringmann G and Hedrich R<br />

Identification of Arabidopsis thaliana phloem RNAs provides a search criterion for phloembased<br />

transcripts hidden in complex datasets of microarray experiments.<br />

Plant J, 2008, 55,5: 746-759<br />

Fominaya A; Linares C, Loarce Y and Ferrer E<br />

Microdissection and microcloning of plant chromosomes.<br />

Cytogenet Genome Res, 2005, 109: 8-14<br />

Fosu-Nyarko J, Jones MG and Wang Z<br />

Application of laser microdissection to study plant-fungal pathogen interactions.<br />

Methods Mol Biol, 2010, 638: 153-163<br />

Fosu-Nyarko J, Jones MG and Wang Z<br />

Functional characterization of transcripts expressed in early-stage Meloidogyne javanicainduced<br />

giant cells isolated by laser microdissection.<br />

Mol Plant Pathol, 2009, 10,2: 237-248<br />

Gil L, Yaron I, Shalitin D, Sauer N, Turgeon R and Wolf S<br />

Sucrose transporter plays a role in phloem loading in CMV-infected melon plants that are<br />

defined as symplastic loaders.<br />

Plant J, 2011, 66,2: 366-374<br />

Gomez S, Javot H, Deewatthanawong P, Torres-Jerez I, Tang Y, Blancaflor E, Udvardi M and Harrison MJ<br />

Medicago truncatula and Glomus intraradices gene expression in cortical cells harboring<br />

arbuscules in the arbuscular mycorrhizal symbiosis.<br />

BMC Plant Biol, 2009, 9:10<br />

Guan X, Lee JJ, Pang M, Shi X, Stelly DM and Chen ZJ<br />

Activation of Arabidopsis seed hair development by cotton fiber-related genes.<br />

PLoS One, 2011, 6,7: e21301<br />

Gutjahr C, Radovanovic D, Geoffroy J, Zhang Q, Siegler H, Chiapello M, Casieri L, An K, An G, Guiderdoni<br />

E, Kumar CS, Sundaresan V, Harrison MJ, Paszkowski U.<br />

The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule<br />

formation in rice.<br />

Plant J. 2012 Mar;69(5):906-20. doi: 10.1111/j.1365-313X.2011.04842.x. PubMed<br />

Hobza R, Lengerova M, Cernohorska H, Rubes J and Vyskot B<br />

FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex<br />

chromosomes of Silene latifolia.<br />

Chromosome Res, 2004, 12,3: 245-250<br />

Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N and Küster H<br />

Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots,<br />

including CAAT-box transcription factor gene expression correlating with fungal contact and<br />

spread.<br />

Plant Physiol, 2011, 157,4: 2023-2043<br />

Ivashikina N, Deeken R, Ache P, Kranz E, Pommerrenig B, Sauer N and Hedrich R<br />

Isolation of AtSUC2 promoter-GFP-marked companion cells for patch-clamp studies and<br />

expression profiling.<br />

Plant J, 2003, 36,6: 931-945<br />

Jasik J, Schiebold S, Rolletschek H, Denolf P, Van Adenhove K, Altmann T and Borisjuk L<br />

Subtissue-specific evaluation of promoter efficiency by quantitative fluorometric assay in laser<br />

microdissected tissues of rapeseed.<br />

Plant Physiol, 2011, 157,2: 563-573<br />

Jia Y, Lisch DR, Ohtsu K, Scanlon MJ, Nettleton D and Schnable PS<br />

Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and<br />

unexpected changes in the expression of transposons, genes, and 24-nt small RNAs.<br />

PLoS Genet, 2009, 5,11: e10000737<br />

October 2012 111/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Kaspar S, Weier D, Weschke W, Mock HP, Matros A.<br />

Protein analysis of laser capture micro-dissected tissues revealed cell-type specific biological<br />

functions in developing barley grains.<br />

Anal Bioanal Chem. 2010 Dec;398(7-8):2883-93. PubMed<br />

Kehr J<br />

Single cell technology.<br />

Curr Opin Plant Biol, 2003, 6,6: 617-621<br />

Kleber R and Kehr J<br />

Preparation and quality assessment of RNA from cell-specific samples obtained by laser<br />

microdissection.<br />

Methods Mol Biol, 2006, 323: 367-377<br />

Lee C, Teng Q, Huang W, Zhong R and Ye ZH<br />

The F8H glycosyltransferase is a functional paralog of FRA8 involved in glucuronoxylan<br />

biosynthesis in Arabidopsis.<br />

Plant Cell Physiol, 2009, 50,4: 812-827<br />

Levy A, Chang BJ, Abbott LK, Kuo J, Harnett G and Inglis TJJ<br />

Invasion of spores of the arbuscular mycorrhizal fungus Gigaspora decipiens by Burkholderia<br />

spp.<br />

Appl Environ Microbiol, 2003, 69: 6250-6256<br />

Lister R, Gregory BD and Ecker JR<br />

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond.<br />

Curr Opin Plant Biol, 2009, 12,2: 107-118<br />

Matas AJ, Yeats TH, Buda GJ, Zheng Y, Chatterjee S, Tohge T, Ponnala L, Adato A, Aharoni A, Stark R,<br />

Fernie AR, Fei Z, Giovannoni JJ and Rose JK<br />

Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides<br />

insights into metabolic and regulatory specialization and cuticle formation.<br />

Plant Cell, 2011, in press<br />

Matsunaga S, Schütze K, Donnison IS, Grant SR, Kuroiwa T and Kawano S<br />

Single pollen typing combined with laser-mediated manipulation.<br />

Plant Journal, 1999, 20,3: 371-378<br />

Matsunaga S, Kawano S, Michimoto T, Higashiyama T, Nakao S, Sakai A and Kuroiwa T<br />

Semi-automatic laser beam microdissection of the Y chromosome and analysis of Y<br />

chromosome DNA in a dioecious plant, Silene latifolia.<br />

Plant Cell Physiol, 1999, 40,1: 60-68<br />

Meimberg M, Thalhammer S, Brachmann A, Müller B, Eichacker LA, Heckl WM and Heubl G<br />

Selection of chloroplasts by laser MicroBeam microdissection for single-chloroplast PCR.<br />

BioTechniques, 2003, 34,6: 1238-1243<br />

Nakashima J, Chen F, Jackson L, Shadle G and Dixon RA<br />

Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa): effects<br />

on lignin composition in specific cell types.<br />

New Phytol, 2008, 179,3: 738-750<br />

Nogueira FT, Chitwood DH, Madi S, Ohtsu K, Schnable PS, Scanlon MJ and Timmermans MC<br />

Regulation of small RNA accumulation in the maize shoot apex.<br />

PLoS Genet, 2009, 5,1: e1000320<br />

Ohkama-Ohtsu N, Radwan S, Peterson A, Zhao P, Badr AF, Xiang C and Oliver DJ<br />

Characterization of the extracellular gamma-glutamyl transpeptidases, GGT1 and GGT2, in<br />

Arabidopsis.<br />

Plant J, 2007, 49,5: 865-877<br />

Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans MC, Beck J, Buckner<br />

B, Janick-Buckner D, Nettleton D, Scanlon MJ and Schnable PS<br />

Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).<br />

Plant J, 2007, 52,3: 391-404<br />

October 2012 112/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Olofsson L, Lundgren A and Brodelius PE<br />

Trichome isolation with and without fixation using laser microdissection and pressure<br />

catapulting followed by RNA amplification: Expression of genes of terpene metabolism in<br />

apical and sub-apical trichome cells of Artemisia annua L.<br />

Plant Science, 2012, in press<br />

Olsson ME, Olofsson LM, Lindahl AL, Lundgren A, Brodelius M and Brodelius PE<br />

Localization of enzymes of artemisinin biosynthesis to the apical cells of glandular secretory<br />

trichomes of Artemisia annua L.<br />

Phytochemistry, 2009, 70,9: 1123-1128<br />

Patten AM, Jourdes M, Cardenas CL, Laskar DD, Nakazawa Y, Chung BY, Franceschi VR, Davin LB and<br />

Lewis NG<br />

Probing native lignin macromolecular configuration in Arabidopsis thaliana in specific cell wall<br />

types: further insights into limited substrate degeneracy and assembly of the lignins of ref8,<br />

fah 1-2 and C4H::F5H lines.<br />

Mol Biosyst, 2010, 6,3: 499-515<br />

Petsch KA, Ma C, Scanlon MJ and Jorgensen RA<br />

Targeted forward mutagenesis by transitive RNAi.<br />

Plant J, 2010, 61: 873-882<br />

Peukert M, Matros A, Lattanzio G, Kaspar S, Abadía J and Mock HP<br />

Spatially resolved analysis of small molecules by matrix-assisted laser desorption/ionization<br />

mass spectrometric imaging (MALDI-MSI).<br />

New Phytol, 2011, in press, doi: 10.1111/j.1469-8137.2011.03970.x<br />

Polster J, Dithmar H, Burgemeister R, Friedemann G and Feucht W<br />

Flavonoids in plant nuclei: detection by laser microdissection and pressure catapulting<br />

(LMPC), in vivo staining, and uv-visible spectroscopic titration.<br />

Physiol Plant, 2006, 128: 163-174<br />

Ramsay K, Wang Z and Jones MGK<br />

Using laser capture microdissection to study gene expression in early stages of giant cells<br />

induced by root-knot nematodes.<br />

Mol Plant Pathol, 2004, 5,6: 587-592<br />

Rüggeberg M, Speck T and Burgert I<br />

Structure-function relationships of different vascular bundle types in the stem of the Mexican<br />

fanpalm (Washingtonia robusta).<br />

New Phytol, 2009, 182,2: 443-450<br />

Rüggeberg M, Speck T, Paris O, Lapierre C, Pollet B, Koch G and Burgert I<br />

Stiffness gradients in vascular bundles of the palm Washingtonia robusta.<br />

Proc Biol Sci, 2008, 275,1648: 2221-2229<br />

Santi S, Grisan S, Pierasco A, DE Marco F, Musetti R.<br />

Laser microdissection of grapevine leaf phloem infected by stolbur reveals site-specific gene<br />

responses associated to sucrose transport and metabolism.<br />

Plant Cell Environ. 2012 Jul 12. doi: 10.1111/j.1365-3040.2012.02577.x. PubMed<br />

Santi S and Schmidt W<br />

Laser microdissection-assisted analysis of the functional fate of irondeficiency-induced root<br />

hairs in cucumber.<br />

J Exp Bot, 2008, 59,3: 697-704<br />

Sanz MJ, Loarce Y, Ferrer E, Fominaya A.<br />

Use of tyramide-fluorescence in situ hybridization and chromosome microdissection for<br />

ascertaining homology relationships and chromosome linkage group associations in oats.<br />

Cytogenet Genome Res. 2012;136(2):145-56. PubMed<br />

Scanlon MJ, Ohtsu K, Timmermans MC and Schnable PS<br />

Laser microdissection-mediated isolation and in vitro transcriptional amplification of plant<br />

RNA.<br />

Curr Protoc Mol Biol, 2009, Chapter 25: Unit 25A.3<br />

October 2012 113/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Schad M, Mungur R, Fiehn O and Kehr J<br />

Metabolic profiling of laser microdissected vascular bundles of Arabidopsis thaliana.<br />

Plant Methods, 2005, 1: 2<br />

Schad M, Lipton MS, Giavalisco P, Smith RD and Kehr J<br />

Evaluation of two-dimensional electrophoresis and liquid chromatography-tandem mass<br />

spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.<br />

Electrophoresis, 2005, 26,14: 2729-2738<br />

Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R and Rolletschek H<br />

A novel procedure for the quantitative analysis of metabolites, storage products and<br />

transcripts of laser microdissected seed tissues of Brassica napus.<br />

Plant Methods, 2011, in press<br />

Schütze K, Niyaz Y, Stich M and Buchstaller A<br />

Noncontact laser microdissection and catapulting for pure sample capture.<br />

Methods Cell Biol, 2007, 82: 649-673<br />

Srivastava AC, Palanichelvam K, Ma J, Steele J, Blancaflor EB and Tang Y<br />

Collection and analysis of expressed sequence tags derived from laser capture microdissected<br />

Switchgrass (Panicum virgatum L. Alamo) vascular tissues.<br />

Bioenerg Res, 2010, 3: 278-294<br />

Tauris B, Borg S, Gregersen PL and Holm PB<br />

A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection<br />

and gene expression profiling.<br />

J Exp Bot, 2009, 60,4: 1333-1347<br />

Thiel J, Hollmann J, Rutten T, Weber H, Scholz U, Weschke W.<br />

454 transcriptome sequencing suggests a role for two-component signalling in cellularization<br />

and differentiation of barley endosperm transfer cells.<br />

PLoS One. 2012;7(7):e41867. PubMed<br />

Thiel J, Riewe D, Rutten T, Melzer M, Friedel S, Bollenbeck F, Weschke W, Weber H. Differentiation of<br />

endosperm transfer cells of barley: a comprehensive analysis at the micro-scale.<br />

Plant J. 2012 Apr 9. doi: 10.1111/j.1365-313X.2012.05018.x. PubMed<br />

Thiel J, Müller M, Weschke W and Weber H<br />

Amino acid metabolism at the maternal-filial boundary of young barley seeds: a microdissection-based<br />

study.<br />

Planta, 2009, 230,1: 205-213<br />

Thiel J, Weier D, Sreenivasulu N, Strickert M, Weichert N, Melzer M, Czauderna T, Wobus U, Weber H and<br />

Weschke W<br />

Different hormonal regulation of cellular differentiation and function in nucellar projection and<br />

endosperm transfer cells: a microdissection-based transcriptome study of young barley grains.<br />

Plant Physiol, 2008, 148,3: 1436-1452<br />

Voo SS, Grimes HD, Lange BM.<br />

Cell type-specific transcriptome analysis of the soybean leaf paraveinal mesophyll layer.<br />

Plant Mol Biol Rep. 2012, DOI 10.1007/s11105-012-0494-7<br />

Voo SS, Grimes HD, Lange BM.<br />

Assessing the biosynthetic capabilities of secretory glands in Citrus peel.<br />

Plant Physiol. 2012 May;159(1):81-94. PubMed PMID: 22452856.<br />

PubMed<br />

Wu CH, Lee SC and Wang CW<br />

Viral protein targeting to the cortical endoplasmic reticulum is required for cell-cell spreading<br />

in plants.<br />

J Cell Biol, 2011, 193,3: 521-535<br />

Yeats TH, Howe KJ, Matas AJ, Buda GJ, Thannhauser TW and Rose JK<br />

Mining the surface proteome of tomato (Solanum lycopersicum) fruit for proteins associated<br />

with cuticle biogenesis.<br />

J Exp Bot, 2010, 61,13: 3759-3771<br />

October 2012 114/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Yu Y, Lashbrook CC and Hannapel DJ<br />

Tissue integrity and RNA quality of laser microdissected phloem of potato.<br />

Planta, 2007, 226,3: 797-803<br />

Zhang X, Douglas RN, Strable J, Lee M, Buckner B, Janick-Buckner D, Schnable PS, Timmermans MC,<br />

Scanlon M.<br />

PUNCTATE VASCULAR EXPRESSION1 (PVE1) is a novel maize gene required for leaf pattern<br />

formation that functions downstream of the ta-siARF pathway.<br />

Plant Physiol. 2012 PubMed PMID: 22669891. PubMed<br />

Zhang X, Madi S, Borsuk L, Nettleton D, Elshire RJ, Buckner B, Janick-Buckner D, Beck J, Timmermans M,<br />

Schnable PS and Scanlon MJ<br />

Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the<br />

shoot apical meristem.<br />

PLoS Genet, 2007, 3,6: e101<br />

Zhou J, Lee C, Zhong R and Ye ZH<br />

MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during<br />

secondary cell wall formation in Arabidopsis.<br />

Plant Cell, 2009, 21,1: 248-266<br />

1.8 Forensics<br />

Anoruo B, van Oorschot R, Mitchell J and Howells D<br />

Isolating cells from non-sperm cellular mixtures using the PALM microlaser microdissection<br />

system.<br />

Forensic Sci Int, 2007, 173,2-3: 93-96<br />

Axler-DiPerte G, Orans S, Singh A, Caragine T, Prinz M and Budimlja ZM<br />

Comparison and optimization of DNA recovery from sperm vs. epithelial cells using laser<br />

capture microdissection technology and an immunofluorescent staining system.<br />

For Sci Int: Gen Suppl Ser, in press<br />

Benschop CC, Wiebosch DC, Kloosterman AD and Sijen T<br />

Post-coital vaginal sampling with nylon flocked swabs improves DNA typing.<br />

Forensic Sci Int Genet, 2010, 4,2: 115-121<br />

Geigl JB and Speicher MR<br />

Single-cell isolation from cell suspensions and whole genome amplification from single cells to<br />

provide templates for CGH analysis.<br />

Nat Protoc, 2007, 2,12: 3173-3184<br />

Li CX, Han JP, Ren WY, Ji AQ, Xu XL and Hu L<br />

DNA profiling of spermatozoa by laser capture microdissection and low volume-PCR.<br />

PLoS One, 2011, 6,8: e22316<br />

Ludes B, Keyser C<br />

Avoiding errors and pitfalls in evidence sampling for forensic genetics.<br />

Forensic Medicine – From old problems to new challenge, 2012, ISBN: 978-307-262-3, 1-12, Prof. Duarte<br />

Nuno Vieira (Ed.), InTech, Available from: http://www.intechopen.com/books/forensic-medicine-fromold-problems-to-new-challenges/avoiding-errors-and-pitfalls-in-evidence-sampling-for-forensic-genetics<br />

Miyazaki T, Hara M, Ichiki A, Yamamoto Y, Takada A, Kido A, Nodera M, Yanagisawa H, Suzuki H and<br />

Saito K<br />

An efficient novel method for analyzing STR loci from a single sperm captured by laser<br />

microdissection.<br />

Forensic Sci Int Genetics Suppl, 2008, 437-438<br />

Murray C, McAlister C and Elliott K<br />

Identification and isolation of male cells using fluorescence in situ hybridisation and laser<br />

microdissection, for use in the investigation of sexual assault.<br />

Forensic Sci Int Genet, 2007, 1,3-4: 247-252<br />

October 2012 115/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Novotný J and Hadrys T<br />

Bringing laser microdissection and on-chip PCR together.<br />

Promega, 2008, profiles in DNA: 9-11<br />

Schulz MM, Buschner M, Leidig R, Wehner HD, Fritz P, Häbig K, Bonin M, Schütz M, Shiozawa T and<br />

Wehner F<br />

A new approach to the investigation of sexual offenses-cytoskeleton analysis reveals the<br />

origin of cells found on forensic swabs.<br />

J Forensic Sci, 2010, 55,2: 492-498<br />

Seidl S, Burgemeister R, Hausmann R and Betz P<br />

Contact-free isolation of sperm and epithelial cells by Laser Microdissection and Pressure<br />

Catapulting.<br />

Forensic Sci Med Pathol, 2005, V1-2: 153-158<br />

Van Oorschot RA, Ballantyne KN and Mitchell RJ<br />

Forensic trace DNA: a review.<br />

Investig Genet, 2010, 1,1:14<br />

Vandewoestyne M, Van Nieuwerburgh F, Van Hoofstat D and Deforce D<br />

Evaluation of three DNA extraction protocols for forensic STR typing after laser capture<br />

microdissection.<br />

Forensic Sci Int Genet, 2011, in press<br />

Vandewoestyne M and Deforce D<br />

Laser capture microdissection in forensic research: a review.<br />

Int J Legal Med, 2010, 124,6: 513-521<br />

Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />

Automatic detection of spermatozoa for laser capture microdissection.<br />

Int J Legal Med, 2009, 123,2: 169-175<br />

Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />

Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and<br />

laser microdissection for STR profiling of male cells in male/female mixtures.<br />

Int J Legal Med, 2009, 123,5: 441-447<br />

Weiler NE, Matai AS and Sijen T<br />

Extended PCR conditions to reduce drop-out frequencies in low template STR typing including<br />

unequal mixtures.<br />

Forensic Sci Int Genet, 2012, 6,1: 102-107<br />

1.9 Miscellaneous<br />

de Bekker C, van Veluw GJ, Vinck A, Wiebenga LA and Wösten HA<br />

Heterogeneity of Aspergillus niger microcolonies in liquid shaken cultures.<br />

Appl Environ Microbiol, 2011, 77,4: 1263-1267<br />

Bobryshev YV, Killingsworth MC, Lord RS and Grabs AJ<br />

Matrix vesicles in the fibrous cap of atherosclerotic plaque: Possible contribution to plaque<br />

rupture.<br />

J Cell Mol Med, 2008, 12,5B: 2073-2082<br />

Bobryshev YV<br />

Intracellular localization of oxidized low-density lipoproteins in atherosclerotic plaque cells<br />

revealed by electron microscopy combined with laser capture microdissection.<br />

J Histochem Cytochem, 2005, 53,6: 793-797<br />

Davies RJ, Koenig C, Burghammer M and Riekel C<br />

On-axis microbeam wide- and small-angle scattering experiments of a sectioned poly(pphenylene<br />

terephthalamide) fiber.<br />

Appl Phys, 2008, 92: 101903-1-101903-3<br />

October 2012 116/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Fuhr G, Reichle C, Müller T, Kahlke K, Schütze K and Stuke M<br />

Processing of micro-particles by UV laser irradiation in a field cage.<br />

Applied Physics, 1999, A 69: 612-616<br />

Gloess S, Grossart HP, Allgaier M, Ratering S and Hupfer M<br />

Use of laser microdissection for phylogenetic characterization of polyphosphate-accumulating<br />

bacteria.<br />

Appl Environ Microbiol, 2008, 74,13: 4231-4235<br />

Greulich KO<br />

Lasermikrotechniken in der Biotechnologie.<br />

Spektrum der Wissenschaft-Dossier. Laser in neuen Anwendungen 1998: 28-31<br />

Huang C, Lucas B, Vervaet C, Braeckmans K, van Calenbergh S, Karalic I, Vandewoestyne M, Deforce D,<br />

Demeester J and de Smedt SC<br />

Unbreakable codes in electrospun fibers: digitally encoded polymers to stop medicine<br />

counterfeiting.<br />

Adv Mater, 2010, 22,24: 2657-2662<br />

Kang Y, Norris MH, Zarzycki-Siek J, Nierman WC, Donachie SP and Hoang TT<br />

Transcript amplification from single bacterium for transcriptome analysis.<br />

Genome Res, 2011, 21,6: 925-935<br />

Max E, Häfner W, Bartels FW, Sugiharto A, Wood C and Fery A<br />

A novel AFM based method for force measurements between individual hair strands.<br />

Ultramicroscopy, 2010, 110,4: 320-324<br />

Niyaz Y and Sägmüller B<br />

Non-contact Laser Microdissection and Pressure Catapulting: Automation via object-oriented<br />

image processing.<br />

Medical Laser Application, 2005, 20: 223-232<br />

Pérez-Osorio AC, Williamson KS and Franklin MJ<br />

Heterogeneous rpoS and rhlR mRNA levels and 16S rRNA/rDNA (rRNA gene) ratios within<br />

Pseudomonas aeruginosa biofilms, sampled by laser capture microdissection.<br />

J Bacteriol, 2010, 192,12: 2991-3000<br />

Schindler M<br />

Select, microdissect, and eject.<br />

Nature Biotechn, 1998, 16,8: 719-720<br />

Schneider-Stock R<br />

Laser microdissection in pathology – research and practice.<br />

Pathol Res Pract, 2003, 199: 353<br />

Seidel R, Gourrier A, Burghammer M, Riekel C, Jeronimidis G and Paris O<br />

Mapping fibre orientation in complex-shaped biological systems with micrometre resolution by<br />

scanning X-ray microdiffraction.<br />

Micron, 2008, 39,2: 198-205<br />

Tian XF, Fan XG, Zhang Y, Huang Y, Dai H and Ying RS<br />

Procuration and identification of bacteria in paraffin-embedded liver tissues of hepatocellular<br />

carcinoma by laser-assisted microdissection technique.<br />

APMIS, 2008, 116,1: 10-15<br />

Williamson KS, Richards LA, Perez-Osorio AC, Pitts B, McInnerney K, Stewart PS, Franklin MJ.<br />

Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome<br />

hibernation factors in the antibiotic tolerant subpopulation and hypoxia induced stress<br />

response in the metabolically active population.<br />

J Bacteriol. 2012 Feb 17. [Epub ahead of print] PubMed<br />

Zheng Z<br />

Molecular epidemiologic studies on Helicobacter pylori infection and stomach cancer risk.<br />

Thesis, 2011: 1-58<br />

October 2012 117/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

2 PALM MicroTweezers<br />

Beck P and Huber R<br />

Detection of cell viability in cultures of hyperthermophiles.<br />

FEMS Microbiological Letters, 1997, 147: 11-14<br />

Buchholz T and Clement-Sengewald A<br />

Möglichkeiten und Grenzen der Polkörperchendiagnostik.<br />

Reproduktionsmedizin, 2000, 16: 343-353<br />

Clement-Sengewald A, Buchholz T and Schütze K, Berg U and Berg FD<br />

Noncontact, laser-mediated extraction of polar bodies for prefertilization genetic diagnosis.<br />

J Assist Reprod Gen, 2002, 19,4: 183-194<br />

Clement-Sengewald A, Buchholz T and Schütze K<br />

Laser microdissection as a new approach to prefertilization genetic diagnosis.<br />

Pathobiology, 2000, 68: 232-236<br />

Clement-Sengewald A, Schütze K, Sandow S, Nevinny C and Pösl H<br />

PALM Robot-MicroBeam for laser-assisted fertilization, embryo hatching and single-cell<br />

prenatal diagnosis.<br />

Wyss P, Tadir Y, Tromberg BJ, Haller U (eds): Photomedicine in Gynecology and Reproduction. Basel,<br />

Karger, 2000: 340-351<br />

Clement-Sengewald A and Schütze K<br />

Animal experimentation. Fertilization of bovine oocytes induced solely with combined laser<br />

microbeam and optical tweezers.<br />

J Assist Reprod Gen, 1996, 13: 259-265<br />

Connolly C<br />

Laser ablation reveals sexual attraction mechanism in flowers.<br />

Biophot Int, 2001, 8,9: 61-63<br />

Fuhr G and Reichle C<br />

Living cells in opto-electrical cages.<br />

Trends in Analyt Chem, 2000, 19: 402-409<br />

Fuhr G and Schnelle T<br />

Dielektrische Mikrofeldkäfige.<br />

Physikalische Blätter, 2000, 57, Nr. 1<br />

Fuhr G, Reichle C, Müller T, Kahlke K, Schütze K and Stuke M<br />

Processing of micro-particles by UV laser irradiation in a field cage.<br />

Appl Phys, 1999, A 69: 612-616<br />

Huber R<br />

Die Laserpinzette als Basis für Einzelzellkultivierungen.<br />

Biospektrum, 1999, 4: 289-291<br />

Huber R, Burggraf S, Mayer T, Barns SM, Rossnagel P and Stetter KO<br />

Isolation of a hyperthermophilic archaeum predicted by in situ RNA analysis.<br />

Nature, 1995, 376: 57-58<br />

Jiménez N, Post JA.<br />

A Novel Approach for Intracellular 3D Immuno-Labeling for Electron Tomography.<br />

Traffic. 2012 Jul;13(7):926-33. doi: 10.1111/j.1600-0854.2012.01363.x. PubMed<br />

Kumar S, Kumar R, Jindal VK and Bharadwaj LM<br />

Immobilization of single walled carbon nanotubes on glass surface.<br />

Materials Letters, 2008, 62: 741-731<br />

Kuroiwa T, Ishibashi K, Takano H, Higashiyama T, Sasaki N, Nishimura Y and Matsunaga S<br />

Optical isolation of individual mitochondria of Physarum polycephalum for PCR analysis.<br />

Protoplasma, 1996, 194: 275-279<br />

October 2012 118/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH


<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />

Laser Microdissection<br />

Nishimura Y, Misumi O, Matsunaga S, Higashiyama T, Yokota A and Kuroiwa T<br />

The active digestion of uniparental chloroplast DNA in a single zygote of Chlamydomonas<br />

reinhardtii is revealed by using the optical tweezer.<br />

PNAS USA, 1999, 96,22: 12577-12582<br />

Pflugradt R, Schmidt U, Landenberger B, Sänger T and Lutz-Bonengel S<br />

A novel and effective separation method for single mitochondria analysis.<br />

Mitochondrion, 2011, 11,2: 308-314<br />

Piggee C<br />

Optical tweezers: not just for physicists anymore.<br />

Anal Chem, 2009, 81,1: 16-19<br />

Reichle C, Sparbier K, Müller T, Schnelle T, Walden P and Fuhr G<br />

Combined laser tweezers and dielectric field cage for the analysis of receptor-ligand interactions<br />

on single cells.<br />

Electrophoresis, 2001, 22: 272-282<br />

Reichle C, Schnelle T, Müller T, Leya T and Fuhr G<br />

A new microsystem for automated electrorotation measurements using laser tweezers.<br />

Biochem Biophys Acta, 2000, 1459: 218-229<br />

Schnelle T, Müller T, Reichle C and Fuhr G<br />

Combined dielectrophoretic field cages and laser tweezers for electrorotation.<br />

Appl Phys, 2000, B70: 267-274<br />

Schütze K, Becker I, Becker K-F, Thalhammer S, Stark R, Heckl WM, Böhm M and Pösl H<br />

Cut out or poke in - the key to the world of single genes: laser micromanipulation as a valuable<br />

tool on the look-out for the origin of disease.<br />

Gen Anal, 1997, 14: 1-8<br />

Schütze K, Clement-Sengewald A and Berg FD<br />

Non-contact laser micromanipulation of gametes and embryos. Part I: The UV-laser<br />

microbeam. Part II: IR-optical tweezers trap.<br />

Hum Reprod Update, 1995, 1,1<br />

Schütze K and Clement-Sengewald A<br />

Catch and move - cut or fuse.<br />

Nature, 1994, 368: 667-670<br />

Schütze K<br />

Laser zona drilling and sperm transfer into the perivitelline space.<br />

Hum Reprod, 1993, 8,1: 390<br />

Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />

Laser microtools in cell biology and molecular medicine.<br />

Laser Physics, 2003, 13: 681-691<br />

October 2012 119/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!