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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
ZEISS Laser Microdissection • Publication List<br />
1 PALM MicroBeam<br />
1.1 DNA and RNA Research ................................................... 2<br />
1.2 Array Applications ........................................................... 78<br />
1.3 Proteomics ..................................................................... 89<br />
1.4 Live Cell Handling ........................................................... 96<br />
1.5 Reproductive Medicine ..................................................... 99<br />
1.6 Chromosomes .............................................................. 101<br />
1.7 Plant Research.............................................................. 105<br />
1.8 Forensics ..................................................................... 110<br />
1.9 Miscellaneous ............................................................... 112<br />
2 PALM MicroTweezers ............................................ 113<br />
Citations are sorted by alphabet.<br />
If you miss a publication or have questions on Laser Microdissection please contact<br />
labs@zeiss.de<br />
This publication list as well as further information on ZEISS Laser Microdissection can be found<br />
on http://www.zeiss.de/microdissection<br />
October 2012 1/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
1 PALM MicroBeam<br />
1.1 DNA and RNA Research<br />
Aaltonen KE, Ebbesson A, Wigerup C and Hedenfalk I<br />
Laser capture microdissection (LCM) and whole genome amplification (WGA) of DNA from<br />
normal breast tissue - optimization for genome wide array analyses.<br />
BMC Res Notes, 2011, 4,1: 69<br />
Aarts WM, Bende RJ, Bossenbroek JG, Pals ST and van Noesel CJM<br />
Variable heavy-chain gene analysis of follicular lymphomas: subclone selection rather than<br />
clonal evolution over time.<br />
Blood, 2001, 98,1: 238-240<br />
Aarts WM, Bende RJ, Vaandrager J-W, Kluin PM, Langerak AW, Pals ST and van Noesel CJM<br />
In situ analysis of the variable heavy chain gene of an IgM/IgG-expressing follicular<br />
lymphoma.<br />
Am J Pathol, 2002, 160,3: 883-891<br />
Adam AC, Faudou V, Paschen SA, Adam OM, Kahl P, Drebber U, Fischer HP, Büttner R.<br />
Hepatocarcinogenesis in non-cirrhotic liver is associated with a reduced number of clonal<br />
hepatocellular patches in non-tumorous liver parenchyma.<br />
J Pathol. 2012 Jun 11. doi: 10.1002/path.4060. PubMed<br />
Adam P, Schoof J, Hartmann M, Schwarz S, Puppe B, Ott M, Rosenwald A, Ott G and Müller-Hermelink HK<br />
Cell migration patterns and ongoing somatic mutations in the progression of follicular<br />
lymphoma.<br />
Cytogenet Genome Res, 2007, 118,2-4: 328-336<br />
Ahmed A<br />
The role of 11β-Hydroxysteroid dehydrogenase type 1 and hepatic glucocorticoid metabolism<br />
in the metabolic syndrome.<br />
Thesis, 2010<br />
Aida M, Irié T, Aida T and Tachikawa T<br />
Expression of protein kinases C ßI, ßII and VEGF during the differentiation of enamel<br />
epithelium in tooth development.<br />
J Dent Res, 2005, 84,3: 234-239<br />
Alanne MH, Siljamäki E, Peltonen S, Väänänen K, Windle JJ, Parada LF, Määttä JA, Peltonen J.<br />
Phenotypic characterization of transgenic mice harboring Nf1(+/-) or Nf1(-/-) osteoclasts in<br />
otherwise Nf1(+/+) background.<br />
J Cell Biochem. 2012 Feb 3. doi: 10.1002/jcb.24088. PubMed<br />
Alba A, Planas R, Clemente X, Carrillo J, Ampudia R, Puertas MC, Pastor X, Tolosa E, Pujol-Borrell R,<br />
Verdaguer J and Vives-Pi M<br />
Natural killer cells are required for accelerated type 1 diabetes driven by interferon-beta.<br />
Clin Exp Immunol, 2008, 151,3: 467-475<br />
Albrecht E, Gotoh T, Ebara F, Wegner J and Maak S<br />
Technical note: Determination of cell-specific gene expression in bovine skeletal muscle tissue<br />
using laser microdissection and reverse-transcription quantitative polymerase chain reaction.<br />
J Anim Sci, 2011, 89,12:4, 339-4343<br />
Albrecht A, Bergado-Acosta JR, Pape HC and Stork O<br />
Role of the neural cell adhesion molecule (NCAM) in amygdalo-hippocampal interactions and<br />
salience determination of contextual fear memory.<br />
Int J Neuropsychopharmacol, 2010, 13,5: 661-674<br />
October 2012 2/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Aleksic K, Lackner C, Geigl JB, Schwarz M, Auer M, Ulz P, Fischer M, Trajanoski Z, Otte M and Speicher<br />
MR<br />
Evolution of genomic instability in diethylnitrosamine-induced hepatocarcinogenesis in mice.<br />
Hepatology, 2011, 53,3: 895-904<br />
Alexander JK, DeVries AC, Kigerl KA, Dahlman JM and Popovich PG<br />
Stress exacerbates neuropathic pain via glucocorticoid and NMDA receptor activation.<br />
Brain Behav Immun, 2009, 23,6: 851-860<br />
Alvarez H, Corvalan A, Roa JC, Argani P, Murillo F, Edwards J, Beaty R, Feldmann G, Hong SM,<br />
Mullendore M, Roa I, Ibañez L, Pimentel F, Diaz A, Riggins GJ and Maitra A<br />
Serial analysis of gene expression identifies connective tissue growth factor expression as a<br />
prognostic biomarker in gallbladder cancer.<br />
Clin Cancer Res, 2008, 14,9: 2631-2638<br />
Amariglio N, Hirshberg A, Scheithauer BW, Cohen Y, Loewenthal R, Trakhtenbrot L, Paz N, Koren-<br />
Michowitz M, Waldman D, Leider-Trejo L, Toren A, Constantini S and Rechavi G<br />
Donor-derived brain tumor following neural stem cell transplantation in an ataxia<br />
telangiectasia patient.<br />
PLoS Med, 2009, 6,2: e1000029<br />
Andrade VP, Ostrovnaya I, Seshan VE, Morrogh M, Giri D, Olvera N, De Brot M, Morrow M, Begg CB, King<br />
TA.<br />
Clonal relatedness between lobular carcinoma in situ and synchronous malignant lesions.<br />
Breast Cancer Res. 2012 Jul 9;14(4):R103. PubMed<br />
Anoruo B, van Oorschot R, Mitchell J and Howells D<br />
Isolating cells from non-sperm cellular mixtures using the PALM microlaser microdissection<br />
system.<br />
Forensic Sci Int, 2007, 173,2-3: 93-96<br />
Arai C, Nomura Y, Ishikawa M, Noda K, Choi JW, Yashiro Y, Hanada N and Nakamura Y<br />
HSPA1A is upregulated in periodontal ligament at early stage of tooth movement in rats.<br />
Histochem Cell Biol, 2010, 134,4: 337-343<br />
Ardigó M, Borroni G, Muscardin L, Kerl H and Cerroni L<br />
Hypopigmented mycosis fungoides in Caucasian patients: A clinicopathologic study of 7 cases.<br />
J Am Acad Dermatol, 2003, 49,2: 264-270<br />
Arendt T and Ueberham U.<br />
Vectors containing an inducible gene encoding a CDK4/CDK6 inhibitor useful for treating<br />
neurodegenerative disorders or diseases associated with an unscheduled activation of the cell<br />
cycle.<br />
United States Patent Application Publication, 2012, PCT/EP100/00702<br />
Ásgeirsdóttir SA, Kamps JA, Bakker HI, Zwiers PJ, Heeringa P, van der Weide K, van Goor H, Petersen<br />
AH, Morselt H, Moorlag HE, Steenbergen E, Kallenberg CG and Molema G<br />
Site-specific inhibition of glomerulonephritis progression by targeted delivery of dexamethasone<br />
to glomerular endothelium.<br />
Mol Pharmacol, 2007, 72,1: 121-131<br />
Asplund A, Gry Björklund M, Sundquist C, Strömberg S, Edlund K, Östman A, Nilsson P, Pontén F and<br />
Lundeberg J<br />
Expression profiling of microdissected cell populations selected from basal cells in normal<br />
epidermis and basal cell carcinoma.<br />
Br J Dermatol, 2008, 158,3: 527-538<br />
Asplund A, Sivertsson Å, Bäckvall H, Ahmadian A, Lundeberg J and Ponten F<br />
Genetic mosaicism in basal cell carcinoma.<br />
Exp Dermatol, 2005, 14: 593-600<br />
Aubele MM, Cummings MC, Mattis AE, Zitzelsberger HF, Walch AK, Kremer M, Höfler H and Werner M<br />
Accumulation of chromosomal imbalances from intraductal proliferative lesions to adjacent in<br />
situ and invasive ductal breast cancer.<br />
Diagn Mol Pathol, 2000, 9,1: 14-19<br />
October 2012 3/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Aubele M, Cummings M, Walch A, Zitzelsberger H, Nahrig J, Höfler H and Werner M<br />
Heterogeneous chromosomal aberrations in intraductal breast lesions adjacent to invasive<br />
carcinoma.<br />
Anal Cell Pathol, 2000, 20,1: 17-24<br />
Aubele M, Mattis A, Zitzelsberger H, Walch A, Kremer M, Welzl G, Höfler H and Werner M<br />
Extensive ductal carcinoma in situ with small foci of invasive ductal carcinoma: evidence of<br />
genetic resemblance by CGH.<br />
Int J Cancer, 2000, 85: 82-86<br />
Aubele M, Zitzelsberger H, Schenck U, Walch A, Höfler H and Werner H<br />
Distinct cytogenetic alterations in squamous intraepithelial lesions of the cervix revealed by<br />
laser-assisted microdissection and comparative genomic hybridization.<br />
American Cancer Society, 1998, 84,6: 375-379<br />
Auf G, Jabouille A, Guérit S, Pineau R, Delugin M, Bouchecareilh M, Magnin N, Favereaux A, Maitre M,<br />
Gaiser T, von Deimling A, Czabanka M, Vajkoczy P, Chevet E, Bikfalvi A and Moenner M<br />
Inositol-requiring enzyme 1α is a key regulator of angiogenesis and invasion in malignant<br />
glioma.<br />
PNAS USA, 2010, 107,35: 15553-15558<br />
Axler-DiPerte G, Orans S, Singh A, Caragine T, Prinz M and Budimlja ZM<br />
Comparison and optimization of DNA recovery from sperm vs. epithelial cells using laser<br />
capture microdissection technology and an immunofluorescent staining system.<br />
For Sci Int: Gen Suppl Ser, in press<br />
Backholer K, Smith JT, Rao A, Pereira A, Iqbal J, Ogawa S, Li Q and Clarke IJ<br />
Kisspeptin cells in the ewe brain respond to leptin and communicate with neuropeptide Y and<br />
proopiomelanocortin cells.<br />
Endocrinology, 2010, 151,5: 2233-2243<br />
Bäckvall H, Asplund A, Gustafsson A, Sivertsson Å, Lundeberg J and Ponten F<br />
Genetic tumor archeology: microdissection and genetic heterogeneity in squamous and basal<br />
cell carcinoma.<br />
Mutat Res, 2005, 571,1-2: 65-79<br />
Bäckvall H, Strömberg S, Gustafsson A, Asplund A, Sivertsson Å, Lundeberg J and Ponten F<br />
Mutation spectra of epidermal p53 clones adjacent to basal cell carcinoma and squamous cell<br />
carcinoma.<br />
Exp Dermatol, 2004, 13,10: 643-640<br />
Baelde HJ, Eikmans M, Lappin DW, Doran PP, Hohenadel D, Brinkkoetter PT, van der Woude FJ, Waldherr<br />
R, Rabelink TJ, de Heer E and Bruijn JA<br />
Reduction of VEGF-A and CTGF expression in diabetic nephropathy is associated with podocyte<br />
loss.<br />
Kidney Int, 2007, 71,7: 637-645<br />
Bailey CM, Morrison JA, Kulesa PM.<br />
Melanoma revives an embryonic migration program to promote plasticity and invasion.<br />
Pigment Cell Melanoma Res. 2012 Sep;25(5):573-83. doi: 10.1111/j.1755-48X.2012.01025.x.<br />
PubMed<br />
Balogh Z, Reiniger L, Rajnai H, Csomor J, Szepesi A, Balogh A, Deák L, Gagyi E, Bödör C and Matolcsy A<br />
High rate of neoplastic cells with genetic abnormalities in proliferation centers of chronic<br />
lymphocytic leukemia.<br />
Leuk Lymphoma, 2011, 52,6: 1080-1084<br />
Bandapalli OR, Macher-Goeppinger S, Schirmacher P, Brand K.<br />
Paracrine signalling in colorectal liver metastases involving tumor cell-derived PDGF-C and<br />
hepatic stellate cell-derived PAK-2.<br />
Clin Exp Metastasis. 2012 Jun;29(5):409-17. PubMed PMID: 22362252. PubMed<br />
Bandapalli OR, Paul E, Schirmacher P, Brand K.<br />
Opposite effects of tissue inhibitor of metalloproteinases-1 (TIMP-1) over-expression and<br />
knockdown on colorectal liver metastases.<br />
BMC Res Notes, 2012, Jan 9;5:14. PubMed<br />
October 2012 4/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Bartel M, Hänsch GM, Giese T, Penzel R, Ceyhan G, Ketterer K, von Knebel-Döberitz M, Friess HM and<br />
Giese NA<br />
Abnormal crosstalk between pancreatic acini and macrophages during the clearance of<br />
apoptotic cells in chronic pancreatitis.<br />
J Pathol, 2008, 215,2: 195-203<br />
Barthelmann J, Nietsch J, Blessenohl M, Laskay T, van Zandbergen G, Westermann J, Kalies K.<br />
The protective Th1 response in mice is induced in the T-cell zone only three weeks after<br />
infection with Leishmania major and not during early T-cell activation.<br />
Med Microbiol Immunol. 2012 Feb;201(1):25-35. doi: 10.1007/s00430-011-0201-6. PubMed<br />
Bataille F, Rümmele P, Dietmaier W, Gaag D, Klebl F, Reichle A, Wild P, Hofstädter F and Hartmann A<br />
Alterations in p53 predict response to preoperative high dose chemotherapy in patients with<br />
gastric cancer.<br />
Mol Pathol, 2003, 56,5: 286-292<br />
Baurain JF, Colau D, van Baren N, Landry C, Martelange V, Vikkula M, Boon T and Coulie PG<br />
High frequency of autologous anti-melanoma CTL directed against an antigen generated by a<br />
point mutationion in a new helicase gene.<br />
J Immunol, 2000, 164: 6057-6066<br />
Bayliss J, Karasoulos T, McLean CA. Frequency and Large T (LT)<br />
Sequence of JC Polyomavirus DNA in oligodendrocytes, astrocytes and granular cells in non-<br />
PML brain.<br />
Brain Pathol, 2011, in press<br />
Bazan V, La Rocca G, Corsale S, Agnese V, Macaluso M, Migliavacca M, Gregorio V, Cascio S, Sisto PS, Di<br />
Fede G, Buscemi M, Fiorentino E, Passantino R, Morello V, Tomasino RM and Russo A<br />
Laser pressure catapulting (LPC): Optimization LPC-system and genotyping of colorectal<br />
carcinomas.<br />
J Cell Physiol, 2005, 2202,2: 503-509<br />
Becker AJ, Chen J, Paus S, Normann S, Beck H, Elger CE, Wiestler OD and Blümcke I<br />
Transcriptional profiling in human epilepsy: expression array and single cell real-time qRT-PCR<br />
analysis reveal distinct cellular gene regulation.<br />
Neuro Report, 2002, 13,10: 1327-1333<br />
Becker AJ, Urbach H, Scheffler B, Baden T, Normann S, Lahl R, Pannek HW, Tuxhorn I, Elger CE,<br />
Schramm J, Wiestler OD and Blümcke I<br />
Focal cortical dysplasia of Taylor’s balloon cell type. Mutational analysis of the TSC1 gene<br />
indicates a pathogenic relationship to tuberous sclerosis.<br />
Ann Neurol, 2002, 52,1: 29-37<br />
Becker B, Roesch A, Hafner C, Stolz W, Dugas M, Landthaler M and Vogt T<br />
Discrimination of melanocytic tumors by cDNA array hybridization of tissues prepared by Laser<br />
Pressure Catapulting.<br />
J Invest Dermatol, 2004, 122,2: 361-368<br />
Becker I, Becker KF, Röhrl MH and Höfler H<br />
Laser-assisted preparation of single cells from stained histological slides for gene analysis.<br />
Histochem Cell Biol, 1997, 108: 447-451<br />
Becker I, Becker KF, Röhrl MH, Minkus G, Schütze K and Höfler H<br />
Single-cell mutation analysis of tumors from stained histologic slides.<br />
Lab Invest, 1996, 75,6: 801-807<br />
Becker KF and Höfler H<br />
Advances in molecular pathology: Laser-based gene analysis.<br />
Boehringer Mannheim, PCR-Bibliographie, 1997, Kap 2<br />
Bedford L, Hay D, Devoy A, Paine S, Powe DG, Seth R, Gray T, Topham I, Fone K, Rezvani N, Mee M,<br />
Soane T, Layfield R, Sheppard PW, Ebendal T, Usoskin D, Lowe J and Mayer RJ<br />
Depletion of 26S proteasomes in mouse brain neurons causes neurodegeneration and Lewylike<br />
inclusions resembling human pale bodies.<br />
J Neurosci, 2008, 28,33: 8189-8198<br />
October 2012 5/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Beer M, Doepping S, Hildner M, Weber G, Grabner R, Hu D, Mohanta SK, Srikakulapu P, Weih F and<br />
Habenicht AJ<br />
Laser-capture microdissection of hyperlipidemic/ApoE⁻/⁻ mouse aorta atherosclerosis.<br />
Methods Mol Biol, 2011, 755: 417-428<br />
Bekker-Jensen S, Lukas C, Melander F, Bartek J and Lukas J<br />
Dynamic assembly and sustained retention of 53BP1 at the sites of DNA damage are controlled<br />
by Mdc1/NFBD1.<br />
J Cell Biol, 2005, 170,2: 201-211<br />
Bemark M, Bergqvist P, Stensson A, Holmberg A, Mattsson J, Lycke NY.<br />
A unique role of the cholera toxin A1-DD adjuvant for long-term plasma and memory B cell<br />
development.<br />
J Immunol. 2011 Feb 1;186(3):1399-410. PubMed<br />
Benchekroun M, DeGraw J, Gao J, Sun L, v Boguslawsky K, Leminen A, Andersson LC and Heiskala M<br />
Impact of fixative on recovery of mRNA from paraffin-embedded tissue.<br />
Diagn Mol Pathol, 2004, 13,2: 116-125<br />
Benschop CC, Wiebosch DC, Kloosterman AD and Sijen T<br />
Post-coital vaginal sampling with nylon flocked swabs improves DNA typing.<br />
Forensic Sci Int Genet, 2010, 4,2: 115-121<br />
Bentivegna S, Zheng J, Namsaraev E, <strong>Carl</strong>ton VE, Pavlicek A, Moorhead M, Siddiqui F, Wang Z, Lee L,<br />
Ireland JS, Suyenaga K, Willis TD, Faham M and Seymour AB<br />
Rapid identification of somatic mutations in colorectal and breast cancer tissues using<br />
mismatch repair detection (MRD).<br />
Hum Mutat, 2008, 29,3: 441-450<br />
Bentzon DN, Mortensen MM, Ørntoft T, Dyrskjøt L, Borre M.<br />
Expression profiling of hereditary versus sporadic prostate cancer suggests CYR61, EGR3,<br />
KLF6 and SNF1LK as differentially expressed genes.<br />
J Urol. 2012,2,55-66. doi:10.4236/oju.2012.22010<br />
Bernsen MR, Diepstra JHS, van Mil P, Punt CJA, Figdor CG, van Muijen GNP, Adema GJ and Ruiter DJ<br />
Presence and localization of T-cell subsets in relation to melanocyte differentiation antigen<br />
expression and tumour regression as assessed by immunohistochemisty and molecular<br />
analysis of microdissected T cells.<br />
J Pathol, 2004, 202: 70-79<br />
Bernsen MR, van Dijk MCRF, Diepstra JHS, Rombout PDM, Adema GJ, van Muijen NP and Ruiter DJ<br />
Nucleic acid extraction and preparation from microdissected tissues.<br />
J Mol Med, 2000, 78: B21-B22<br />
Bernsen MR, Dijkman HBPM, de Vries E, Figdor CG, Ruiter DJ, Adema GJ and van Muijen GNP<br />
Identification of multiple mRNA and DNA sequences from small tissue samples isolated by<br />
laser-assisted microdissection.<br />
Lab Invest, 1998, 78: 1267-1273<br />
Bertheau P, Plassa LF, Lerebours F, de Roquancourt A, Turpin E, Lidereau R, de Thé H and Janin A<br />
Allelic loss detection in inflammatory breast cancer: Improvement with Laser Microdissection.<br />
Lab Invest, 2001, 81,10: 1397-1402<br />
Berthet S, Demont-Caulet N, Pollet B, Bidzinski P, Cézard L, Le Bris P, Borrega N, Hervé J, Blondet E,<br />
Balzergue S, Lapierre C and Jouanin L<br />
Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of<br />
Arabidopsis thaliana stems.<br />
Plant Cell, 2011, 23,3: 1124-1137<br />
Bhanot U, Köhntop R, Hasel C and Möller P<br />
Evidence of Notch pathway activation in the ectatic ducts of chronic pancreatitis.<br />
J Pathol, 2008, 214,3: 312-319<br />
Bhanot U, Heydrich R, Möller P and Hasel C<br />
Surviving expression in pancreatic intraepithelial neoplasia (PanIM): steady increase along<br />
the developmental stages of pancreatic ductal adenocarcinoma.<br />
Am J Surg Pathol, 2006, 30,6: 754-759<br />
October 2012 6/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Bhasin M, Huang Z, Pradhan-Nabzdyk L, Malek JY, LoGerfo PJ, Contreras M, Guthrie P, Csizmadia E,<br />
Andersen N, Kocher O, Ferran C, LoGerfo FW.<br />
Temporal network based analysis of cell specific vein graft transcriptome defines key<br />
pathways and hub genes in implantation injury.<br />
PLoS One. 2012;7(6):e39123. PubMed PMID: 22720046; PubMed<br />
Bhonsle L.<br />
Characterization of potentially autoaggressive brain infiltrating CD8+ T cells in multiple<br />
sclerosis patients.<br />
Thesis, 2011 PubMed<br />
Billerey C, Chopin D, Aubriot-Lorton MH, Ricol D, de Medina SGD, van Rhijn Bas, Bralet MP, Lefrere-Belda<br />
MA, Lahaye JB, Abbou CC, Bonaventure J, Zafrani ES, van der Kwast T, Thiery JP and Radvanyi F<br />
Frequent FGFR3 mutations in papillary non-invasive bladder (pTa) tumors.<br />
Am J Pathol, 2001, 158: 1955-1959<br />
Binder MD, Cate HS, Prieto A, Kemper D, Butzkueven H, Gresle MM, Cipriani T, Jokubaitis VG, Carmeliet P<br />
and Kilpatrick TJ<br />
Gas6 deficiency increases oligodendrocyte loss and microglial activation in response to<br />
cuprizone-induced demyelination.<br />
J Neurosci, 2008, 28,20: 5195-5206<br />
Bitoun E, Finelli MJ, Oliver PL, Lee S and Davies KE<br />
AF4 is a critical regulator of the IGF-1 signaling pathway during Purkinje cell development.<br />
J Neurosci, 2009, 29,49: 15366-15374<br />
Blalock EM, Buechel HM, Popovic J, Geddes JW and Landfield PW<br />
Microarray analyses of laser-captured hippocampus reveal distinct gray and white matter<br />
signatures associated with incipient Alzheimer's disease.<br />
J Chem Neuroanat, 2011, 42,2: 118-126.<br />
Blaschke S, Koziolek M, Schwarz A, Benöhr P, Middel P, Schwarz G, Hummel K-M and Müller GA<br />
Proinflammatory role of fractalkine (CX3CL1) in rheumatoid arthritis.<br />
J Rheumatol, 2003, 30,9: 1918-1927<br />
Blöcher S, Fink L, Bohle RM, Bermann M and Steger K<br />
CREM activatior and repressor isoform expression in human male germ cells.<br />
Int J Androl, 2005, 28: 215-223<br />
Bobryshev YV, Tran D, Botelho NK, Lord RV and Orekhov AN<br />
Musashi-1 expression in atherosclerotic arteries and its relevance to the origin of arterial<br />
smooth muscle cells: histopathological findings and speculations.<br />
Atherosclerosis, 2011, 215,2: 355-365<br />
Bochmann L, Sarathchandra P, Mori F, Lara-Pezzi E, Lazzaro D and Rosenthal N<br />
Revealing new mouse epicardial cell markers through transcriptomics.<br />
PLoS One, 2010, 5,6: e11429<br />
Bock O, Loch G, Schade U, von Wasielewski R, Schlué J and Kreipe H<br />
Aberrant expression of transforming growth factor ß-1 (TGFß-1) per se does not discriminate<br />
fibrotic from non-fibrotic chronic myeloproliferative disorders.<br />
J Pathol, 2005, 205,5: 548-557<br />
Bock O, Schlué J, Mengel M, Büsche G, Serinsöz E and Kreipe H<br />
Thrombopoietin receptor (MpI) expression by megakaryocytes in myeloproliferative disorders.<br />
J Pathol, 2004, 203: 609-615<br />
Bock, O, Neusch M, Büsche G, Mengel M and Kreipe H<br />
Constitutive expression of the FK506 binding protein 51 (FKBP51) in bone marrow cells and<br />
megakaryocytes derived from idiopathic myelofibrosis and non-neoplastic haematopoiesis.<br />
Eur J Haematol, 2004, 72,4: 239-244<br />
Boelens MC, Gustafson AM, Postma DS, Kok K, van der Vries G, van der Vlies P, Spira A, Lenburg ME,<br />
Geerlings M, Sietsma H, Timens W, van den Berg A and Groen HJ<br />
A chronic obstructive pulmonary disease related signature in squamous cell lung cancer.<br />
Lung Cancer, 2011, 72,2: 177-183<br />
October 2012 7/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Boelens MC, Te Meerman GJ, Gibcus JH, Blokzijl T, Boezen HM, Timens W, Postma DS, Groen HJ and van<br />
den Berg A<br />
Microarray amplification bias: loss of 30% differentially expressed genes due to long probe -<br />
poly(A)-tail distances.<br />
BMC Genomics, 2007, 8,1: 277<br />
Böhm M, Wieland I, Schütze K and Rübben H<br />
Microbeam-MOMeNT: non-contact laser microdissection of membrane mounted native tissue.<br />
Am J Pathol, 1997, 151: 63-67<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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October 2012 9/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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Single fetal cells separated by the Laser MicroBeam technique.<br />
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Laser-assisted microdissection: Methods for the molecular analysis of psychiatric disorders at<br />
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October 2012 10/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Cantz T, Zuckerman DM, Burda MR, Dandri M, Göricke B, Thalhammer S, Heckl WM, Manns MP, Petersen<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Chan RW, Lai FM, Li EK, Tam LS, Chow KM, Lai KB, Li PK and Szeto CC<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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October 2012 20/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Gamel-Didelon K, Corsi C, Pepeu G, Jung H, Gratzl M and Mayerhofer A<br />
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Gao S, Bennett EP, Reibel J, Chen X, Christensen ME, Krogdahl A and Dabelsteen E<br />
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Leydig cells express FSH receptors in african catfish.<br />
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October 2012 21/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Gava N, L Clarke C, Bye C, Byth K and Defazio A<br />
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October 2012 22/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Göransson H, Edlund K, Rydåker M, Rasmussen M, Winquist J, Ekman S, Bergqvist M, Thomas A, Lambe<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Grimm J, Mueller A, Hefti F and Rosenthal A<br />
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Grzmil M, Hemmerlein B, Thelen P, Schweyer S and Burfeind P<br />
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Guan X, Lee JJ, Pang M, Shi X, Stelly DM and Chen ZJ<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Gutjahr C, Radovanovic D, Geoffroy J, Zhang Q, Siegler H, Chiapello M, Casieri L, An K, An G, Guiderdoni<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Harrington AM, Hughes PA, Martin CM, Yang J, Castro J, Isaacs NJ, Ashley Blackshaw L and Brierley SM<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Helfrich I, Scheffrahn I, Bartling S, Weis J, Felbert V, Middleton M, Kato M, Ergün S and Schadendorf D<br />
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Laser-controlled microdissection of tissues opens a window of new opportunities.<br />
Pathol Res Pract, 2003, 199: 419-423<br />
De Hertogh G, Aerssens J, de Hoogt R, Peeters P, Verhasselt P, Van Eyken P, Ectors N, Vermeire S,<br />
Rutgeerts P, Coulie B and Geboes K<br />
Validation of 16S rDNA sequencing in microdissected bowel biopsies from Crohn´s disease<br />
patients to assess bacterial flora diversity.<br />
J Pathol, 2006, 209,4: 532-539<br />
Hijjawi NS, Meloni BP, Ryan UM, Olson ME and Thompson RCA<br />
Successful in vitro cultivation of Cryptosporidium andersoni: evidence for the existence of<br />
novel extracellular stages in the life cycle and implications for the classification of<br />
Cryptosporidium.<br />
Int J Parasitol, 2002, 32: 1719-1726<br />
Ho CL, Kurman RJ, Dehari R, Wang TL and Shih IM<br />
Mutations of BRAF and KRAS precede the development of ovarian serious borderline tumors.<br />
Cancer Res, 2004, 64: 6915-6918<br />
Hodgin JB, Borczuk AC, Nasr SH, Markowitz GS, Nair V, Martini S, Eichinger F, Vining C, Berthier CC,<br />
Kretzler M and d'Agati VD<br />
A molecular profile of focal segmental glomerulosclerosis from formalin-fixed, paraffinembedded<br />
tissue.<br />
Am J Pathol, 2010, 177,4: 1674-1686<br />
Hölschermann H, Bohle RM, Schmidt H, Zeller H, Fink L, Stahl U, Grimm H, Tillmanns H, Haberbosch W<br />
Hirudin reduces tissue factor expression and attenuates graft arteriosclerosis in rat cardiac<br />
allografts.<br />
Circulation, 2000, 102: 357-363<br />
Hölsken A, Kreutzer J, Hofmann BM, Hans V, Oppel F, Buchfelder M, Fahlbusch R,<br />
Blümcke I and Buslei R<br />
Target gene activation of the Wnt signaling pathway in nuclear beta-catenin accumulating<br />
cells of adamantinomatous craniopharyngiomas.<br />
Brain Pathol, 2009, 19,3: 357-364<br />
Hofbauer M, Wiesener S, Babbe H, Roers A, Wekerle H, Dornmair K, Hohlfeld R and Goebels N<br />
Clonal tracking of autoaggressive T cells in polymyositis by combining laser microdissection,<br />
single-cell PCR, and CDR3-spectratype analysis.<br />
PNAS, 2003, 100: 4090-4095<br />
Hoffman AC, Danenberg KD, Taubert H, Danenberg PV and Wuerl P<br />
A three-gene signature for outcome in soft tissue sarcoma.<br />
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October 2012 27/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Hoffmann AC, Wild P, Leicht C, Bertz S, Danenberg KD, Danenberg PV, Stöhr R, Stöckle M, Lehmann J,<br />
Schuler M and Hartmann A<br />
MDR1 and ERCC1 expression predict outcome of patients with locally advanced bladder cancer<br />
receiving adjuvant chemotherapy.<br />
Neoplasia, 2010, 12,8: 628-636<br />
Hoffmann AC, Mori R, Vallbohmer D, Brabender J, Drebber U, Baldus SE, Klein E, Azuma M, Metzger R,<br />
Hoffmann C, Hoelscher AH, Danenberg KD, Prenzel KL and Danenberg PV<br />
High expression of heparanase is significantly associated with dedifferentiation and lymph<br />
node metastasis in patients with pancreatic ductal adenocarcinomas and correlated to PDGFA<br />
and via HIF1a to HB-EGF and bFGF.<br />
J Gastrointest Surg, 2008, 12,10: 1674-1681<br />
Hoffmann AC, Mori R, Vallbohmer D, Brabender J, Klein E, Drebber U, Baldus SE, Cooc J, Azuma M,<br />
Metzger R, Hoelscher AH, Danenberg KD, Prenzel KL and Danenberg PV<br />
High expression of HIF1a is a predictor of clinical outcome in patients with pancreatic ductal<br />
adenocarcinomas and correlated to PDGFA, VEGF, and bFGF.<br />
Neoplasia, 2008, 10,7: 674-679<br />
Hoffmann M, Gaikwad J, Schmalz G, Cavender A and D’Souza R<br />
Analysis of odontoblast gene expression using a novel approach, Laser Capture<br />
Microdissection.<br />
Connect Tissue Res, 2002, 43: 376-380<br />
Hoffmann M, Olson K, Cavender A, Pasqualini R, Gaikwad J and D’Souza RN<br />
Gene expression in a pure population of odontoblasts isolated by laser-capture<br />
microdissection.<br />
J Dent Res, 2001, 80,11: 1963-1967<br />
Hofnagel O, Luechtenborg B, Stolle K, Lorkowski S, Eschert H, Plenz G and Robenek H<br />
Proinflammatory cytokines regulate LOX-1 expression in vascular smooth muscle cells.<br />
Arterioscler Thromb Vasc Biol, 2004, 24: 1789-1795<br />
Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N and Küster H<br />
Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots,<br />
including CAAT-box transcription factor gene expression correlating with fungal contact and<br />
spread.<br />
Plant Physiol, 2011, 157,4: 2023-2043<br />
Ho Hong S, Young Nah H, Yoon Lee J, Chan Gye M, Hoon Kim C and Kyoo Kim M<br />
Analysis of estrogen-regulated genes in mouse uterus using cDNA microarray and laser<br />
capture microdissection.<br />
J Endocrinol, 2004, 181: 157-167<br />
Hoivik EA, Aumo L, Aesoy R, Lillefosse H, Lewis AE, Perrett RM, Stallings NR, Hanley NA and Bakke M<br />
Deoxyribonucleic acid methylation controls cell type-specific expression of steroidogenic<br />
factor 1.<br />
Endocrinology, 2008, 149,11: 5599-5609<br />
Hong SM, Vincent A, Kanda M, Leclerc J, Omura N, Borges M, Klein AP, Canto MI, Hruban RH, Goggins M.<br />
Genome-Wide Somatic Copy Number Alterations in Low-Grade PanINs and IPMNs from<br />
Individuals with a Family History of Pancreatic Cancer.<br />
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Hong YS, Kang S, Han M, Gobert GN and Jones MK<br />
High quality RNA isolation from Aedes aegypti midguts using laser microdissection<br />
microscopy.<br />
Parasit Vectors, 2011, 4,1: 83<br />
Hong SH, Nah HY and Kim CH<br />
Estrogen-regulated expression and distribution of Id-1 in the mouse uterus.<br />
Placenta, 2010, 31,3: 240-244<br />
Hose KA, Häffner K, Fietz D, Gromoll J, Eckert T, Kliesch S, Siebert HC and Bergmann M<br />
A novel sequence variation in the transactivation regulating domain of the human androgen<br />
receptor.<br />
Fertil Steril, 2009, 92,1: e9-390<br />
October 2012 28/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Hourez R, Servais L, Orduz D, Gall D, Millard I, de Kerchove d'Exaerde A, Cheron G, Orr HT, Pandolfo M,<br />
Schiffmann SN.<br />
Aminopyridines correct early dysfunction and delay neurodegeneration in a mouse model of<br />
spinocerebellar ataxia type 1.<br />
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A, Maloney SL, Bell AI, Murray PG, Dawson CW, Young LS, Arrand JR.<br />
A global view of the oncogenic landscape in nasopharyngeal carcinoma: an integrated analysis<br />
at the genetic and expression levels.<br />
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Huang Q, Choy KW, Cheung KF, Lam DSC, Fu WL and Pang CP<br />
Genetic alterations on chromosome 19, 20, 21, 22, and X detected by loss of heterozygotity<br />
analysis in retinoblastoma.<br />
Mol Vis, 2003, 9: 502-507<br />
Hughes S, Pothecary CA, Jagannath A, Foster RG, Hankins MW, Peirson SN.<br />
Profound defects in pupillary responses to light in TRPM-channel null mice: a role for TRPM<br />
channels in non-image-forming photoreception.<br />
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Hughes PA, Brierley SM, Young RL and Blackshaw LA<br />
Localization and comparative analysis of acid-sensing ion channel (ASIC1, 2, and 3) mRNA<br />
expression in mouse colonic sensory neurons within thoracolumbar dorsal root ganglia.<br />
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Huizar I, Malur A, Midgette YA, Kukoly C, Chen P, Ke PC, Podila R, Rao AM, Wingard CJ, Dobbs L, Barna<br />
BP, Kavuru MS and Thomassen MJ<br />
Novel murine model of chronic granulomatous lung inflammation elicited by carbon<br />
nanotubes.<br />
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Semrau R, Arnold D, Dellas K, Debucquoy A, Haustermans K, Machiels JP, Sempoux C, Rödel C, Bracko<br />
M, Velenik V and Lenz HJ<br />
EGF61 polymorphism predicts complete pathologic response to cetuximab-based<br />
chemoradiation independent of KRAS status in locally advanced rectal cancer patients.<br />
Clin Cancer Res, 2011, 17,15: 5161-5169<br />
Hussein K<br />
Gene expression profiling in laser-microdissected bone marrow megakaryocytes.<br />
Methods Mol Biol, 2011, 755: 429-439<br />
Hussein K, von Neuhoff N, Büsche G, Buhr T, Kreipe H and Bock O<br />
Opposite expression pattern of Src kinase Lyn in acute and chronic haematological<br />
malignancies.<br />
Ann Hematol, 2009, 88,11: 1059-1067<br />
Hussein K, Theophile K, Dralle W, Wiese B, Kreipe H and Bock O<br />
MicroRNA expression profiling of megakaryocytes in primary myelofibrosis and essential<br />
thrombocythemia.<br />
Platelets, 2009, 20,6: 391-400<br />
Hussein K, Dralle W, Theophile K, Kreipe H and Bock O<br />
Megakaryocytic expression of miRNA 10a, 17-5p, 20a and 126 in Philadelphia chromosomenegative<br />
myeloproliferative neoplasm.<br />
Ann Hematol, 2009, 88,4: 325-332<br />
Hvid H, Klopfleisch R, Vienberg S, Hansen BF, Thorup I, Jensen HE and Oleksiewicz MB<br />
Unique expression pattern of the three insulin receptor family members in the rat mammary<br />
gland: dominance of IGF-1R and IRR over the IR, and cyclical IGF-1R expression.<br />
J Appl Toxicol, 2011, 31,4: 312-328<br />
October 2012 29/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Ibe T, Shimizu K, Nakano T, Kakegawa S, Kamiyoshihara M, Nakajima T, Kaira K, and Takeyoshi I<br />
High-grade neuroendocrine carcinoma of the lung shows increased thymidylate synthase<br />
expression compared to other histotypes.<br />
J Surg Oncol, 2010, 102,1: 11-17<br />
Ikenaga N, Ohuchida K, Mizumoto K, Yu J, Fujita H, Nakata K, Ueda J, Sato N, Nagai E and Tanaka M<br />
S100A4 mRNA is a diagnostic and prognostic marker in pancreatic carcinoma.<br />
J Gastrointest Surg, 2009, 13,10: 1852-1858<br />
Imamichi Y, Koebernick K and Wedlich D<br />
Prospects for tissue-specific analysis of gene expression in Xenopus embryos through lasermediated<br />
microdissection of histological sections.<br />
Pathol Res Pract, 2003, 199: 381-389<br />
Imamichi Y, Lahr G, Wedlich D<br />
Laser-mediated microdissection of paraffin sections from Xenopus embryos allows detection<br />
of tissue-specific expressed mRNAs.<br />
Dev Genes Evol, 2001, 211: 361-366<br />
Immervoll H, Hoem D, Kugarajh K, Steine SJ and Molven A<br />
Molecular analysis of the EGFR-RAS-RAF pathway in pancreatic ductal adenocarcinomas: lack<br />
of mutations in the BRAF and EGFR genes.<br />
Virchows Arch, 2006, 448,6: 778-796<br />
Irié T, Aida T and Tachikawa T<br />
Gene expression profiling of oral squamous cell carcinoma using laser microdissection and<br />
cDNA microarray.<br />
Mod Electron Microsc, 2004, 37: 89-96<br />
Ivanidze J, Hoffmann R, Lochmüller H, Engel AG, Hohlfeld R and Dornmair K<br />
Inclusion body myositis: laser microdissection reveals differential up-regulation of IFN-γ<br />
signaling cascade in attacked versus nonattacked myofibers.<br />
Am J Pathol, 2011, 179,3: 1347-1359<br />
Ivashikina N, Deeken R, Ache P, Kranz E, Pommerrenig B, Sauer N and Hedrich R<br />
Isolation of AtSUC2 promoter-GFP-marked companion cells for patch-clamp studies and<br />
expression profiling.<br />
Plant J, 2003, 36,6: 931-945<br />
Jaeger J, Koczan D, Thiesen HJ, Ibrahim SM, Gross G, Spang R and Kunz M<br />
Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in<br />
laser-microdissected melanoma tissues.<br />
Clin Cancer Res, 2007, 13,3: 806-815<br />
Jakob C, Liersch T, Meyer W, Becker H, Baretton GB and Aust DE<br />
Predictive value of Ki67 and p53 in locally advanced rectal cancer: Correlation with<br />
thymidylate synthase and histopathological tumor regression after neoadjuvant 5-FU-based<br />
chemoradiotherapy.<br />
World J Gastroenterol, 2008, 14,7: 1060-1066<br />
Jakob C, Aust DE, Meyer W, Baretton GB, Schwabe W, Häusler P, Becker H and Liersch T<br />
Thymidylate synthase, thymidine phosphorylase, dihydropyrimidine dehydrogenase<br />
expression, and histological tumour regression after 5-FU-based neo-adjuvant chemoradiotherapy<br />
in rectal cancer.<br />
J Pathol, 2004, 204: 562-568<br />
Jang JY, Park YC, Song YS, Lee SE, Hwang DW, Lim CS, Lee HE, Kim WH and Kim SW<br />
Increased K-ras mutation and expression of S100A4 and MUC2 protein in the malignant<br />
intraductal papillary mucinous tumor of the pancreas.<br />
J Hepatobiliary Pancreat Surg, 2009, 16,5: 668-674<br />
Janin A, Murata H, Leboeuf C, Cayuela JM, Gluckman E, Legrès L, Desveaux A, Varna M, Ratajczak P,<br />
Soulier J, de Thé H, Bertheau P and Socié G<br />
Donor-derived oral squamous cell carcinoma after allogeneic bone marrow transplantation.<br />
Blood, 2009, 113,8: 1834-1840<br />
October 2012 30/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Jasik J, Schiebold S, Rolletschek H, Denolf P, Van Adenhove K, Altmann T and Borisjuk L<br />
Subtissue-specific evaluation of promoter efficiency by quantitative fluorometric assay in laser<br />
microdissected tissues of rapeseed.<br />
Plant Physiol, 2011, 157,2: 563-573<br />
Jazayeri A, Falck J, Lukas C, Bartek J, Smith GC, Lukas J and Jackson SP<br />
ATM-and cell cycle-dependent regulation of ATR in response to DNA double-strand breaks.<br />
Nat Cell Biol, 2006, 8,1: 37-45<br />
Jensen LH, Kuramochi H, Crüger DG, Lindebjerg J, Kolvraa S, Danenberg P, Danenberg K and Jakobsen A<br />
Gene expression of the mismatch repair gene MSH2 in primary colorectal cancer.<br />
Tumour Biol, 2011, 32,5: 977-983<br />
Jeung HC, Rha SY, Shin SJ, Lim SJ, Roh JK, Noh SH and Chung HC<br />
Predictive values of 5-fluorouracil pathway genes for S-1 treatment in patients with advanced<br />
gastric cancer.<br />
Anticancer Drugs, 2011, 22,8: 801-810<br />
Jia Y, Lisch DR, Ohtsu K, Scanlon MJ, Nettleton D and Schnable PS<br />
Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and<br />
unexpected changes in the expression of transposons, genes, and 24-nt small RNAs.<br />
PLoS Genet, 2009, 5,11: e10000737<br />
Jiménez N, Post JA.<br />
A Novel Approach for Intracellular 3D Immuno-Labeling for Electron Tomography.<br />
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Jo N, Wu G-S and Rao Na<br />
Upregulation of chemokine expression in the retinal vasculature in ischemia-reperfusion<br />
injury.<br />
Invest Ophtalmol, 2003, 44,9: 4054-4060<br />
Joglekar MV, Wei C and Hardikar AA<br />
Quantitative estimation of multiple microRNAs and mRNAs from a single cell.<br />
Cold Spring Harb Protoc, 2010: 1-29<br />
Johansson A, Rudolfsson S, Hammarsten P, Halin S, Pietras K, Jones J, Stattin P, Egevad L, Granfors T,<br />
Wikström P and Bergh A<br />
Mast cells are novel independent prognostic markers in prostate cancer and represent a target<br />
for therapy.<br />
Am J Pathol, 2010, 177,2: 1031-1041<br />
Jones KB, Piombo V, Searby C, Kurriger G, Yang B, Grabellus F, Roughley PJ, Morcuende JA, Buckwalter<br />
JA, Capecchi MR, Vortkamp A and Sheffield VC<br />
A mouse model of osteochondromagenesis from clonal inactivation of Ext1 in chondrocytes.<br />
PNAS USA, 2010, 107,5: 2054-2059<br />
Jones KJ, Randall LM, McManus DP and Engwerda CR<br />
Laser microdissection microscopy in parasitology: microscopes meet thermocyclers.<br />
Trends in Parasitol, 2004, 20,11: 502-506<br />
Joseph A and Gnanapragasam V<br />
Laser microdissection: a day for answers.<br />
Therapy, 2010, 7,5: 551-554<br />
Jovanovic Z, Tung YC, Lam BY, O'Rahilly S and Yeo GS<br />
Identification of the global transcriptomic response of the hypothalamic arcuate nucleus to<br />
fasting and leptin.<br />
J Neuroendocrinol, 2010, 22,8: 915-925<br />
Judex M, Neumann E, Lechner S, Dietmaier W, Ballhorn W Grifka J, Gay S, Schölmerich J, Kullmann F<br />
and Müller-Ladner U<br />
Laser-mediated microdissection facilitates analysis of area-specific gene expression in<br />
rheumatoid synovium.<br />
Arthritis Rheum, 2003, 48: 97-102<br />
October 2012 31/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Julian E, Dave RK, Robson JP, Hallahan AR and Wainwright BJ<br />
Canonical Notch signaling is not required for the growth of Hedgehog pathway-induced<br />
medulloblastoma.<br />
Oncogene, 2010, 29,24: 3465-3476<br />
Junker A, Ivanidze J, Malotka J, Eiglmeier I, Lassmann H, Wekerle H, Meinl E,<br />
Hohlfeld R and Dornmair K<br />
Multiple sclerosis: T-cell receptor expression in distinct brain regions.<br />
Brain, 2007, 130: 2789-2799<br />
Kakehashi A, Inoue M, Wei M, Fukushima S and Wanibuchi H<br />
Cytokeratin 8/18 overexpression and complex formation as an indicator of GST-P positive foci<br />
transformation into hepatocellular carcinomas.<br />
Toxicol Appl Pharmacol, 2009, 238,1: 71-79<br />
Kalamarides M, Niwa-Kawakita M, Leblois H, Abramowski V, Perricaudet M, Janin A, Thomas G, Gutmann<br />
DH and Giovanni M<br />
Nf2 gene inactivation in arachnoidal cells is rate-limiting for meningioma development in the<br />
mouse.<br />
Genes Dev, 2002, 16,9: 1060-1065<br />
Kalies K, König P, Zhang YM, Deierling M, Barthelmann J, Stamm C and Westermann J<br />
Nonoverlapping expression of IL10, IL12p40, and IFNgamma mRNA in the marginal zone and<br />
T cell zone of the spleen after antigenic stimulation.<br />
J Immunol, 2008, 180,8: 5457-5465<br />
Kalies K, Blessenohl M, Nietsch J and Westermann J<br />
T cell Zones of lymphoid organs constitutively express Th1 cytokine mRNA: Specific changes<br />
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J Immunol, 2006, 176: 741-749<br />
Kam R, Chen J, Blümcke I, Normann S, Fassunke J, Elger CE, Schramm J, Wiestler OD and Becker AJ<br />
The reelin pathway components disabled-1 and p35 in gangliogliomas - a mutation and<br />
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Neuropathol Appl Neurobiol, 2003, 30: 225-232<br />
Kamphuis W, Dijk F and O’Brien BJ<br />
Gene expression of AMPA-type glutamate receptor subunits in rod-type ON bipolar cells of rat<br />
retina.<br />
Eur J Neurosci, 2003, 18: 1085-1092<br />
Kanazawa T, Adachi E, Orimo S, Nakamura A, Mizusawa H and Uchihara T<br />
Pale neurites, premature α-synuclein aggregates with centripetal extension from axon<br />
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Kaneda M, Okano M, Nata K, Sado T, Tsujimoto N, Li E and Sasaki H<br />
Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting.<br />
Nature, 2004, 429: 900-903<br />
Kang Y, Norris MH, Zarzycki-Siek J, Nierman WC, Donachie SP and Hoang TT<br />
Transcript amplification from single bacterium for transcriptome analysis.<br />
Genome Res, 2011, 21,6: 925-935<br />
Kaserer K, Schmaus J, Bethge U, Migschitz B, Fasching S, Walch A, Herbst F, Teleky B and Wrba F<br />
Staining patterns of p53 immunohistochemistry and their biological significance in colorectal<br />
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Kawai K, Horiike N, Michitaka K and Onji M<br />
The effects of hepatitis B virus core promoter mutations on hepatitis B core antigen<br />
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J Hepatol, 2003, 38: 635-641<br />
Kayashima T, Nakata K, Ohuchida K, Ueda J, Shirahane K, Fujita H, Cui L, Mizumoto K and Tanaka M<br />
Insig2 is overexpressed in pancreatic cancer and its expression is induced by hypoxia.<br />
Cancer Sci, 2011, 102,6: 1137-1143<br />
October 2012 32/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kehr J<br />
Single cell technology.<br />
Curr Opin Plant Biol, 2003, 6,6: 617-621<br />
Kela I, Harmelin A, Waks T, Orr-Urtreger A, Domany E and Eshhar Z<br />
Interspecies comparison of prostate cancer gene-expression profiles reveals genes associated<br />
with aggressive tumors.<br />
Prostate, 2009, 69,10: 1034-1044<br />
Kemper B, Langehanenberg P, Höink A, von Bally G, Wottowah F, Schinkinger S, Guck J, Käs J,<br />
Bredebusch I, Schnekenburger J and Schütze K<br />
Monitoring of laser micromanipulated optically trapped cells by digital holographic microscopy.<br />
J Biophotonics, 2010, 3,7: 425-431<br />
Kenngott RA, Vermehren M, Sauer U, Ebach K and Sinowatz F<br />
Cellular expression and localization of estrogen receptor {α} and progesterone receptor mRNA<br />
in the bovine oviduct combining laser-assisted microdissection, quantitative PCR, and in situ<br />
hybridization.<br />
J Histochem Cytochem, 2011, 59,3: 312-327<br />
Kenngott R, Al-Banaw A, Vermehren M, Wendl J and Sinowatz F<br />
Application of laser-assisted microdissection for gene expression analysis of mammalian germ<br />
cells.<br />
Anat Histol Embryol, 2010, 39,3: 219-226<br />
Khoshnaw SM, Powe DG, Ellis IO and Green AR<br />
Detection and quantification of microRNAs in laser-microdissected formalin-fixed paraffinembedded<br />
breast cancer tissues.<br />
Methods Mol Biol, 2011, 755: 119-142<br />
Kikumoto Y, Sugiyama H, Inoue T, Morinaga H, Takiue K, Kitagawa M, Fukuoka N, Saeki M, Maeshima Y,<br />
Wang DH, Ogino K, Masuoka N and Makino H<br />
Sensitization to alloxan-induced diabetes and pancreatic cell apoptosis in acatalasemic mice.<br />
Biochim Biophys Acta, 2010, 1802,2: 240-246<br />
Kim SM, Bhonsle L, Besgen P, Nickel J, Backes A, Held K, Vollmer S, Dornmair K, Prinz JC.<br />
Analysis of the Paired TCR α- and β-chains of Single Human T Cells.<br />
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Kim KH, Choi JS, Kim JM, Choi YL, Shin YK, Lee HC, Seong IO, Kim BK, Chae SW and Kim SH<br />
Enhanced CD24 expression in endometrial carcinoma and its expression pattern in normal and<br />
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Histol Histopathol, 2009, 24,3: 309-316<br />
Kim K, Kumagai J, Eishi Y, Ishige I, Ishige Y and Koike M<br />
Clonality analysis for normal and cancerous colon tissues with human androgen receptor gene<br />
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Differential gene expression analysis using paraffin-embedded tissues after laser microdissection.<br />
J Cell Biochem, 2003, 90: 998-1006<br />
Kimura Y, Kouda H, Eishi Y, Kobayashi D, Suzuki Y, Ishige I, Iino Y and Kitamura K<br />
Detection of mitochondrial DNA from human inner ear using real-time polymerase chain<br />
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October 2012 33/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kirches E, Krause G, Warich-Kirches M, Weis S, Schneider T, Meyer-Puttlitz B Mawrin C and Dietzmann K<br />
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Kleeberger W, Versmold A, Rothämel T, Glöckner S, Bredt M, Haverich A, Lehmann U and Kreipe H<br />
Increased chimerism of bronchial and alveolar epithelium in human lung allografts undergoing<br />
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Kleeberger W, Rothämel T, Glöckner S, Flemming P, Lehmann U and Kreipe H<br />
High frequency of epithelial chimerism in liver transplants demonstrated by microdissection<br />
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Hepatology, 2002, 35,1: 110-116<br />
Kleeberger W, Rothämel T, Glöckner S, Lehmann U and Kreipe H<br />
Laser-assisted microdissection and short tandem repeat PCR for the investigation of graft<br />
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Pathobiology, 2000, 68: 196-201<br />
Klein CA, Wilke M, Pool J, Vermeulen C, Blokland E, Burghart E, Krostina S, Wendler N, Passlick B,<br />
Riethmueller G and Goulmy E<br />
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Klitgaard K, Mølbak L, Jensen TK, Lindboe CF and Boye M<br />
Laser capture microdissection of bacterial cells targeted by fluorescence in situ hybridization.<br />
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The combined expression pattern of BMP2, LTBP4, and DERL1 discriminates malignant from<br />
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Med Microbiol Immunol, 2003, 192: 129-132<br />
October 2012 34/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Klussmann JP, Gültekin E, Weissenborn SJ, Wieland U, Dries V, Dienes HP, Eckel HE, Pfister HJ and Fuchs<br />
PG<br />
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Pfister HJ and Fuchs PG<br />
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carcinomas.<br />
Cancer, 2001, 92: 2875-2884<br />
Knöll A, Stoehr R, Jilg W and Hartmann A<br />
Low frequency of human polyomavirus BKV and JCV DNA in urothelial carcinomas of the renal<br />
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Koda H, Kimura Y, Ishige I, Eishi Y, Iino Y and Kitamura K<br />
Quantitative cellular level analysis of mitochondrial DNA 3243A>G mutations in individual<br />
tissues from the archival temporal bones of a MELAS patient.<br />
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Noninvasive prenatal diagnosis of beta-thalassaemia using individual fetal erythroblasts<br />
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October 2012 35/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Koop K, Eikmans M, Wehland M, Baelde H, Ijpelaar D, Kreutz R, Kawachi H, Kerjaschki D, de Heer E and<br />
Bruijn JA<br />
Selective loss of podoplanin protein expression accompanies proteinuria and precedes<br />
alterations in podocyte morphology in a spontaneous proteinuric rat model.<br />
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Kotter MR, Li WW, Zhao C and Franklin RJM<br />
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Caveolin-1 and -2 airway epithelium: expression and in situ association as detected by FRET-<br />
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Collection of isolated cells for studying mitochondrial DNA mutations within individual cells.<br />
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Kreft A, Kindler T, Springer E and Kirkpatrick CJ<br />
JAK2-V617F-mutated myeloproliferative neoplasms reveal different allele burden within<br />
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Combined molecular genetic and cytogenetic analysis from single cells after isothermal wholegenome<br />
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Petek E, Guetta E and Sedlmayr P<br />
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Krylov V, Kubickova S, Rubes J, Macha J, Tlapakova T, Seifertova E and Sebkova N<br />
Preparation of Xenopus tropicalis whole chromosome painting probes using laser<br />
microdissection and reconstruction of X. laevis tetraploid karyotype by Zoo-FISH.<br />
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October 2012 36/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kubo N, Akita N, Shimizu A, Kitahara H, Parker AL and Miyagawa S<br />
Identification of oligopeptide binding to colon cancer cells separated from patients using laser<br />
capture microdissection.<br />
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Meyer F, Schulz HU, Hartmann A, Roessner A and Schneider-Stock R<br />
Silencing of MGMT expression by promoter hypermethylation in the metaplasia-dysplasiacarcinoma<br />
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Prevalence of copy number neutral LOH in glioblastomas revealed by genome-wide analysis of<br />
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Kuhn E, Kurman RJ, Vang R, Sehdev AS, Han G, Soslow R, Wang TL and Shih IM<br />
TP53mutations in serous tubal intraepithelial carcinoma and concurrent pelvic high-grade<br />
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Kuhn DE, Roy S, Radtke J, Khanna S and Sen CK<br />
Laser microdissection and capture of pure cardiomyocytes and fibroblasts from infarcted heart<br />
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Laser microdissection and pressure catapulting technique to study gene expression in the<br />
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Kulla A, Burkhardt K, Meyer-Puttlitz B, Teesalu T, Asser T, Wiestler OD and Becker AJ<br />
Analysis of the TP53 gene in laser-microdissected glioblastoma vasculature.<br />
Acta Neuropathol, 2003, 105: 328-332<br />
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Identification of Hodgkin and Reed-Sternberg cell-specific genes by gene expression profiling.<br />
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Kuramochi H, Nakajima G, Kaneko Y, Nakamura A, Inoue Y, Yamamoto M, Hayashi K.<br />
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Cancer Chemother Pharmacol, 2010, 65,5: 825-831<br />
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High intratumoral dihydropyrimidine dehydrogenase mRNA levels in pancreatic cancer<br />
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Cancer Chemother Pharmacol, 2008, 63,1: 85-89<br />
October 2012 37/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kuramochi H, Hayashi K, Uchida K, Miyakura S, Shimizu D, Vallböhmer D, Park S, Danenberg KD,<br />
Takasaki K and Danenberg PV<br />
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Kuroiwa T, Ishibashi K, Takano H, Higashiyama T, Sasaki N, Nishimura Y and Matsunaga S<br />
Optical isolation of individual mitochondria of Physarum polycephalum for PCR analysis.<br />
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Kutler DI, Wreesmann VB, Goberdhan A, Ben-Porat L, Satagopan J, Ngai I, Huvos AG, Giampietro P,<br />
Levran O, Pujara K, Diotti R, <strong>Carl</strong>son D, Huryn LA, Auerbach AD and Singh B<br />
Human Papillomavirus DNA and p53 polymorphisms in squamous cell carcinomas from Fanconi<br />
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Kwapiszewska G, Wilhelm J, Wolff S, Laumanns I, Koenig IR, Ziegler A, Seeger W, Bohle RM, Weissmann<br />
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Kwong R, Lupton MK, Janitz M.<br />
Single-Cell and Regional Gene Expression Analysis in Alzheimer's Disease.<br />
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Development of a multifunctional coating system for laser-induced material transport.<br />
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Diagnosis of papillary thyroid carcinoma is facilitated by using an RT-PCR approach on lasermicrodissected<br />
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Sequential application of interphase-FISH and CGH to single cells.<br />
Lab Invest, 2005, 85,4: 582-592<br />
October 2012 38/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Langer S, Geigl JB, Ehnle S, Gangnus R, Speicher MR<br />
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Lau CS, Yu CB, Wong HK, Fan DS, Mak HT, Wong KW, Lam DS, Pang CP and Choy KW<br />
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Br J Ophthalmol, 2010, 94,3: 357-363<br />
Laurén HB, Lopez-Picon FR, Brandt AM, Rios-Rojas CJ and Holopainen IE<br />
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PLoS One, 2010, 5,5: e10733<br />
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Regulation of the Bcas1 and Baiap3 transcripts in the subthalamic nucleus in mice recovering<br />
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Gene expression pattern of laser microdissected colonic crypts of adenomas with low grade<br />
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Gut, 2003, 52: 1148-1153<br />
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Chorionic plate vessels as an origin of amniotic fluid neutrophils.<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Lehmann U, Versmold A and Kreipe H<br />
Combined laser-assisted microdissection and short tandem repeat analysis for detection of in<br />
situ microchimerism after solid organ transplantation.<br />
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Lehmann U, Länger F, Feist H, Glöckner S, Hasemeier B and Kreipe H<br />
Quantitative assessment of promoter hypermethylation during breast cancer development.<br />
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Lehmann U, Hasemeier B, Lilischkis R and Kreipe H<br />
Quanitative analysis of promoter hypermethylation in laser-microdissected archival<br />
specimens.<br />
Lab Invest, 2001, 81,4: 635-637<br />
Lehmann U and Kreipe H<br />
Real-Time PCR analysis of DNA and RNA extracted from formalin-fixed and paraffin-embedded<br />
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Methods, 2001, 25,4: 409-418<br />
Lehmann U, Glöckner S, Kleeberger W, Feist H, von Wasielewski R and Kreipe H<br />
Detection of gene amplification in archival breast cancer specimens by laser-assisted<br />
microdissection and quantitative real-time polymerase chain reaction.<br />
Am J Pathol, 2000, 156,6: 1855-1864<br />
Lehmann U, Bock O, Glöckner S and Kreipe H<br />
Quantitative molecular analysis of laser-microdissected paraffin-embedded human tissues.<br />
Pathobiology, 2000, 68: 202-208<br />
Lehmann-Che J, Amira-Bouhidel F, Turpin E, Antoine M, Soliman H, Legres L, Bocquet C, Bernoud R,<br />
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October 2012 40/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Li Q, Rao A, Pereira A, Clarke IJ and Smith JT<br />
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October 2012 41/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Lu J, Kwan BCH, Lai FMM, Choi PCL, Tam LS, Li EKM, Chow KM, Wang G, Li PKT, Szeto CC<br />
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lupus nephritis.<br />
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patients with lupus nephritis.<br />
Nephrology (<strong>Carl</strong>ton), 2011, 16,4: 426-432<br />
Lu JX and Szeto CC<br />
Gene expression using the PALM system.<br />
Methods Mol Biol, 2011, 755: 47-56<br />
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Lurquin C, Lethé B, De Plaen E, Corbière V, Théate I, van Baren N, Coulie PG and Boon T<br />
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JEM, 2005, 201,2: 249-257<br />
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Thesis, 2012<br />
October 2012 42/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Maglennon GA, McIntosh P and Doorbar J<br />
Persistence of viral DNA in the epithelial basal layer suggests a model for papillomavirus<br />
latency following immune regression.<br />
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Maitre M, Roullot-Lacarrière V, Piazza PV and Revest JM<br />
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Pressure Catapulting (LMPC).<br />
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Makino H, Uetake H, Danenberg K, Danenberg PV and Sugihara K<br />
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Malapelle U, de Rosa N, Rocco D, Bellevicine C, Crispino C, Illiano A, Piantedosi F, Nappi O, Troncone G<br />
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Christiansen H and Ramadori G<br />
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Preliminary report: Correct diagnosis of sex in fetal cells isolated from cervical mucus during<br />
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October 2012 43/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Marx AH, Zielinski M, Kowitz CM, Dancau AM, Thieltges S, Simon R, Choschzick M, Yekebas E, Kaifi JT,<br />
Mirlacher M, Atanackovic D, Brümmendorf TH, Fiedler W, Bokemeyer C, Izbicki JR and Sauter G<br />
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Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides<br />
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October 2012 44/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Matthaei H, Norris AL, Tsiatis AC, Olino K, Hong SM, dal Molin M, Goggins MG, Canto M, Horton KM,<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Mengel M, Jonigk D, Marwedel M, Kleeberger W, Bredt M, Bock O, Lehmann U, Gwinner W, Haller H and<br />
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Méry A, Aimond F, Ménard C, Mikoshiba K, Michalak M and Pucéat M<br />
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TNF receptor-1 is required for the formation of splenic compartments during adult, but not<br />
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Miller-Delaney SF, Das S, Sano T, Jimenez-Mateos EM, Bryan K, Buckley PG, Stallings RL, Henshall DC.<br />
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Transplantation, 2003, 76,4: 715-720<br />
Miyake K, Imura S, Yoshizumi T, Ikemoto T, Morine Y and Shimada M<br />
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Forensic Sci Int Genetics Suppl, 2008, 437-438<br />
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Expression of Somatostatin Receptor (SSTR) Subtypes (SSTR-1, 2A, 3, 4 and 5) in<br />
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October 2012 46/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Mølbak L, Klitgaard K, Jensen TK, Fossi M and Boye M<br />
16S rRNA gene identification of a novel invasive not-yet cultivated Treponema sp. in the large<br />
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Mori R, Wang Q, Danenberg KD, Pinski JK and Danenberg PV<br />
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Muller IB<br />
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October 2012 47/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Mustafa T, Eckert A, Klonisch T, Kehlen A, Maurer P, Klintschar M, Erhuma M, Zschoyan R, Gimm O,<br />
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Hoang-Vu C<br />
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Nafe R, Glienke W, Burgemeister R, Gangnus R, Haar B, Pries A and Schlote W<br />
Regional heterogeneity of EGFR-gene-amplification and nuclear morphology in glioblastomas –<br />
An investigation using Laser Microdissection and Pressure Catapulting (LMPC).<br />
Anal Quant Cytol Histol, 2004, 26,2: 65-76<br />
Nafe R, Gangnus R, Glienke W, Burgemeister R, Haar B, Pries A and Schlote W<br />
Laser Microdissection and Pressure Catapulting (LMPC) in paraffin sections mounted on glass<br />
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laser pressure catapulting.<br />
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Pathology of three transgenic mouse lines with unique pten mutant alleles.<br />
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October 2012 48/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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Noncontact Laser Microdissection and Pressure Catapulting: Sample preparation for genomic,<br />
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Microarrays in Clinical Diagnostics in Methods in Molecular Medicine, 2005, 114: 1-24 (ed. Joos T and<br />
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Niyaz Y and Schütze K<br />
Noncontact Laser Microdissection and Pressure Catapulting: A basic tool in genomics,<br />
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Business briefings, Future Drug Discovery, 2004: 93-98<br />
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Evolution of urticaria pigmentosa into indolent systemic mastocytosis: Abnormal immunophenotype<br />
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Leukemia & Lymphoma, 2003, 44: 313-319<br />
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Nogueira FT, Chitwood DH, Madi S, Ohtsu K, Schnable PS, Scanlon MJ and Timmermans MC<br />
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Promega, 2008, profiles in DNA: 9-11<br />
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October 2012 49/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Obermann EC, Junker K, Stoehr R, Dietmaier W, Zaak D, Schubert J, Hofstaedter F, Knuechel R and<br />
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Gene Expression Analysis of the Embryonic Subplate.<br />
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Changes in 11ß-hydroxysteroid dehydrogenase type 2 expression in a low-protein rat model of<br />
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Nephrol Dial Transplant, 2010, 25,10: 3136-3138<br />
Oztürk G, Cengiz N, Erdoğan E, Him A, Oğuz EK, Yenidünya E, Ayşit N.<br />
Two Distinct Types of Dying Back Axonal Degeneration In Vitro.<br />
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Acta Histochem Cytochem, 2008, 41,3: 39-46<br />
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Yamamoto H and Doi T<br />
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Characterization of the extracellular gamma-glutamyl transpeptidases, GGT1 and GGT2, in<br />
Arabidopsis.<br />
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Significance of system L amino acid transporter 1 (LAT-1) and 4F2 heavy chain (4F2hc)<br />
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Acta Histochem Cytochem, 2009, 42,3: 73-81<br />
Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans MC, Beck J, Buckner<br />
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Oral Surg Oral Med Oral Pathol Oral Radiol Endod, 2009, 107,1: 81-91<br />
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Oikawa T, Nomura Y, Arai C, Noda K, Hanada N and Nakamura Y<br />
Mechanism of active eruption of molars in adolescent rats.<br />
Eur J Orthod, 2010, in press<br />
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Laser microdissection-based analysis of hypoxia- and thioredoxin-related genes in human<br />
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Cardiovasc Pathol, 2009, 18,5: 294-300<br />
October 2012 50/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
O'Kane SL, Garimella V, Sivarajasingham N, Drew PJ and Cawkwell L<br />
Direct polymerase chain reaction amplification of formalin-fixed, paraffin-wax-embedded<br />
tissue after automated sequential laser microdissection and pressure catapulting.<br />
J Clin Pathol, 2007, 60,2: 216-217<br />
Okudela K, Yazawa T, Tajiri M, Omori T, Takahashi K, Woo T, Shimoyamada H, Ogawa N and Kitamura H<br />
A case of epithelial-myoepithelial carcinoma of the bronchus - a review of reported cases and<br />
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Pathol Res Pract, 2010, 206,2: 121-129<br />
Okudela K, Yazawa T, Woo T, Sakaeda M, Ishii J, Mitsui H, Shimoyamada H, Sato H, Tajiri M, Ogawa N,<br />
Masuda M, Takahashi T, Sugimura H and Kitamura H<br />
Down-regulation of DUSP6 expression in lung cancer: its mechanism and potential role in<br />
carcinogenesis.<br />
Am J Pathol, 2009, 175,2: 867-881<br />
Okudela K, Yazawa T, Tajiri M, Omori T, Takahashi K, Woo T, Shimoyamada H, Ogawa N and Kitamura H<br />
A case of epithelial-myoepithelial carcinoma of the bronchus - A review of reported cases and<br />
a comparison with other salivary gland-type carcinomas of the bronchus.<br />
Pathol Res Pract, 2010, 206,2: 121-129<br />
Okuducu AF, Janzen V, Hahne JC, Ko Y and Wernert N<br />
Influence of histochemical stains on quantitative gene expression analysis after laser-assisted<br />
microdissection.<br />
Int J Mol Med, 2003, 11: 449-453<br />
Olias P, Jacobsen ID and Gruber AD<br />
Fungal species identification from avian lung specimens by single hypha laser microdissection<br />
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Med Mycol, 2011, 49,1: 56-61<br />
de Oliveira GP, Maximino JR, Lin CJ and Chadi G<br />
A method to immunolabel rodent spinal cord neurons and glia for molecular study in specific<br />
laser microdissected cells involved in neurodegenerative disorders.<br />
J Mol Histol, 2009, 40,3: 217-225<br />
Olofsson L, Lundgren A and Brodelius PE<br />
Trichome isolation with and without fixation using laser microdissection and pressure<br />
catapulting followed by RNA amplification: Expression of genes of terpene metabolism in<br />
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Plant Science, 2012, in press<br />
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Localization of enzymes of artemisinin biosynthesis to the apical cells of glandular secretory<br />
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Pathology, pathogenesis and therapy of growth hormone (GH)-producing pituitary adenomas:<br />
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October 2012 51/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Ou DL, Shen YC, Yu SL, Chen KF, Yeh PY, Fan HH, Feng WC, Wang CT, Lin LI, Hsu C and Cheng AL<br />
Induction of DNA damage-inducible gene GADD45ß contributes to sorafenib-induced apoptosis<br />
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Pajcini KV, Corbel SY, Sage J, Pomerantz JH and Blau HM<br />
Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian<br />
muscle.<br />
Cell Stem Cell, 2010, 7,2: 198-213<br />
Paredes J, Albergaria A, Oliveira JT, Jerónimo C, Milanezi F and Schmitt FC<br />
P-Cadherin overexpression is an indicator of clinical outcome in invasive breast carcinomas<br />
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Patt BT, Jarjoura D, Haddad DN, Sen CK, Roy S, Flavahan NA and Khayat RN<br />
Endothelial dysfunction in the microcirculation of patients with obstructive sleep apnea.<br />
Am J Respir Crit Care Med, 2010, 182,12: 1540-1545<br />
Patten AM, Jourdes M, Cardenas CL, Laskar DD, Nakazawa Y, Chung BY, Franceschi VR, Davin LB and<br />
Lewis NG<br />
Probing native lignin macromolecular configuration in Arabidopsis thaliana in specific cell wall<br />
types: further insights into limited substrate degeneracy and assembly of the lignins of ref8,<br />
fah 1-2 and C4H::F5H lines.<br />
Mol Biosyst, 2010, 6,3: 499-515<br />
Patterson-Fortin J, Shao G, Bretscher H, Messick TE and Greenberg RA<br />
Differential regulation of jamm domain deubiquitinating enzyme activity within the rap80<br />
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J Biol Chem, 2010, in press<br />
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Augmented epithelial endothelin-1 expression in refractory asthma.<br />
J Allergy Clin Immunol, 2007, 120,6: 1301-1307<br />
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Dopamine type 2 receptor expression and function in rodents sensory neurons projecting to<br />
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Am J Physiol Lung Cell Mol Physiol, 2005, 289: L153-158<br />
Pendeville H, Carpino N, Marine JC, Takahashi Y, Muller M, Martial JA and Cleveland JL<br />
The ornithine decarboxylase gene is essential for cell survival during early murine<br />
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Mol Cell Biol, 2001, 21,19: 6549-6558<br />
Peng T, Zhu J, Phasouk K, Koelle DM, Wald A, Corey L.<br />
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J Bacteriol, 2010, 192,12: 2991-3000<br />
October 2012 52/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Perrin FE, Boisset G, Lathuilière A and Kato AC<br />
Cell death pathways differ in several mouse models with motoneurone disease: analysis of<br />
pure motoneurone populations at a presymptomatic age.<br />
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Hum Mol Genet, 2005, 14,21: 3309-3321<br />
Persson A, Bäckvall H, Pontén F, Uhlén M and Lundeberg J<br />
Single cell gene mutation analysis using laser-assisted microdissection of tissue sections.<br />
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Analysis of p53 mutations in single cells obtained from histological tissue sections.<br />
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Targeted forward mutagenesis by transitive RNAi.<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Salek C, Minarikova P, Benesova L, Nosek V, Strnad R, Zavoral M and Minarik M<br />
Mutation status of K-ras, p53 and allelic losses at 9p and 18q are not prognostic markers in<br />
patients with pancreatic cancer.<br />
Anticancer Res, 2009, 29,5: 1803-1810<br />
Salek C, Benesova L, Zavoral M, Nosek V, Kasperova L, Ryska M, Strnad R, Traboulsi E and Minarik M<br />
Evaluation of clinical relevance of examining K-ras, p16 and p53 mutations along with allelic<br />
losses at 9p and 18q in EUS-guided fine needle aspiration samples of patients with chronic<br />
pancreatitis and pancreatic cancer.<br />
World J Gastroenterol, 2007, 13,27: 3714-3720<br />
Saller S, Kunz L, Dissen GA, Stouffer R, Ojeda SR, Berg D, Berg U and Mayerhofer A<br />
Oxytocin receptors in the primate ovary: molecular identity and link to apoptosis in human<br />
granulosa cells.<br />
Hum Reprod, 2010, 25,4: 969-976<br />
Sand-Dejmek J, Adelmant G, Sobhian B, Calkins AS, Marto J, Iglehart DJ and Lazaro JB<br />
Concordant and opposite roles of DNA-PK and the "facilitator of chromatin transcription"<br />
(FACT) in DNA repair, apoptosis and necrosis after cisplatin.<br />
Mol Cancer, 2011, 10: 74<br />
Sanderson NS, Le B, Zhou Z and Crews D<br />
Preoptic neuronal nitric oxide synthase induction by testosterone is consistent with a role in<br />
gating male copulatory behavior.<br />
Eur J Neurosci, 2008, 27,1: 183-190<br />
Sandow S, Meenzen C, Schütze K, Knitza R, Bieger W and Nevinny-Stickel C<br />
Isolation and characterization of fetal cells from maternal blood.<br />
Med Gen, 1997, 1: P9-17<br />
Santi S, Grisan S, Pierasco A, DE Marco F, Musetti R.<br />
Laser microdissection of grapevine leaf phloem infected by stolbur reveals site-specific gene<br />
responses associated to sucrose transport and metabolism.<br />
Plant Cell Environ. 2012 Jul 12. doi: 10.1111/j.1365-3040.2012.02577.x. PubMed<br />
Santi S and Schmidt W<br />
Laser microdissection-assisted analysis of the functional fate of iron deficiency-induced root<br />
hairs in cucumber.<br />
J Exp Bot, 2008, 59,3: 697-704<br />
Sanz MJ, Loarce Y, Ferrer E, Fominaya A.<br />
Use of tyramide-fluorescence in situ hybridization and chromosome microdissection for<br />
ascertaining homology relationships and chromosome linkage group associations in oats.<br />
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Satkauskas S and Bagnard D<br />
Local protein synethsis in axonal growth cones. What is next?<br />
Cell Adhesion Migration, 2007, 4: 179-184<br />
Sato S, Maeda C, Hattori N, Yagi S, Tanaka S and Shiota K<br />
DNA Methylation-dependent modulator of Gsg2/Haspin gene expression.<br />
J Reprod Dev, 2011, 57,4: 526-533<br />
Sauer U, Ehnle S and Burgemeister R<br />
Laser Pressure Catapulting (LMPC) of sperm cells and optimisation of DNA isolation.<br />
PALM, 2004, Application Note, 1-4<br />
Scanlon MJ, Ohtsu K, Timmermans MC and Schnable PS<br />
Laser microdissection-mediated isolation and in vitro transcriptional amplification of plant<br />
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Schain F, Tryselius Y, Sjöberg J, Porwit A, Backman L, Malec M, Xu D, Vockerodt M, Baumforth KR, Wei<br />
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October 2012 60/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Scheidl SJ, Nilsson S, Kalén M, Hellström M, Takemoto M, Håkansson J and Lindahl P<br />
mRNA expression profiling of laser microbeam microdissected cells from slender embryonic<br />
structures.<br />
Am J Pathol, 2002, 160,3: 801-813<br />
Schessl J, Zou Y, McGrath MJ, Cowling BS, Maiti B, Chin SS, Sewry C, Battini R, Hu Y, Cottle DL,<br />
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KM, Mitchell CA and Bönnemann CG<br />
Proteomic identification of FHL1 as the protein mutated in human reducing body myopathy.<br />
J Clin Invest, 2008, 118,3: 904-912<br />
Schick B, Veldung B, Wemmert S, Jung V, Montenarh M, Meese E and Urbschat S<br />
P53 and Her-2/neu in juvenile angiofibromas.<br />
Oncol Rep, 2005, 13: 453-457<br />
Schick V, Majores M, Engels G, Spitoni S, Koch A, Elger CE, Simon M, Knobbe C, Blümcke I and Becker AJ<br />
Activation of Akt independent of PTEN and CTMP tumor-suppressor gene mutations in<br />
epilepsy-associated Taylor-type focal cortical dysplasias.<br />
Acta Neuropathol (Berl), 2006, 112,6: 715-725<br />
Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R and Rolletschek H<br />
A novel procedure for the quantitative analysis of metabolites, storage products and<br />
transcripts of laser microdissected seed tissues of Brassica napus.<br />
Plant Methods, 2011, in press<br />
Schlieben S, Kulmala J and Burgemeister R<br />
Direct isolation of poly-A(+)mRNA from individual laser microdissected cell samples obtained<br />
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Bio-Nobile, 2004, Technical Note 41000-003: 1-2<br />
Schlomm T, Luebke AM, Sultmann H, Hellwinkel OJ, Sauer U, Poustka A, David KA, Chun FK, Haese A,<br />
Graefen M, Erbersdobler A and Huland H<br />
Extraction and processing of high quality RNA from impalpable and macroscopically invisible<br />
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Int J Oncol, 2005, 27,3: 713-720<br />
Schlott T, Scharf JG, Gorzel C, Middel P and Spring H<br />
Cirrhotic livers reveal genetic changes in the MDM2-P14ARF system of cell cycle regulators.<br />
Br J Cancer, 2002, 86: 1290-1296<br />
Schmid H, Henger A, Cohen CD, Frach K, Gröne HJ, Schlöndorff D and Kretzler M<br />
Gene expression profiles of podocyte-associated molecules as diagnostic markers in acquired<br />
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J Am Soc Nephrol, 2003, 14: 2958-2966<br />
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Schmitz M, Driesch C, Beer-Grondke K, Jansen L, Runnebaum IB, Dürst M.<br />
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TNFAIP3 (A20) is a tumor suppressor gene in Hodgkin lymphoma and primary mediastinal B<br />
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Different mRNA expression profile during tumor progression in a well-differentiated<br />
liposarcoma – A microdissection approach.<br />
Pathol Res Pract, 2003, 199: 445-450<br />
October 2012 61/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Schneider-Stock R, Boltze C, Jaeger V, Stumm M, Seiler C, Rys J, Schütze K and Roessner A<br />
Significance of loss of heterozygosity of the RB1 gene during tumor progresson in welldifferentiated<br />
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J Pathol, 2002, 197: 654-660<br />
Schneider-Stock R, Boltze C, Jäger V, Epplen J, Landt O, Peters B, Rys J and Roessner A<br />
Elevated telomerase activity, c-MYC-, and hTERT mRNA expression: association with tumour<br />
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J Pathol, 2003, 199: 517-525<br />
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Sample preparation by laser microdissection and catapulting for proteome analysis.<br />
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Noncontact laser microdissection and catapulting for pure sample capture.<br />
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The force of focused light in different areas of cell and molecular biology.<br />
J Mol Med, 2000, 78: B21<br />
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Use of laser technology for microdissection and isolation.<br />
Am Biotechn Lab, 1999, 17,4: 24-30<br />
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Cell Mol Biol, 1998, 44: 735-746<br />
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Laser Microdissection and Laser Catapulting; a key-technique for single cell based gene<br />
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BIOforum Int, 1998, 4: 177-179<br />
Schütze K and Lahr G<br />
Identification of expressed genes by laser-mediated manipulation of single cells.<br />
Nature Biotechnol, 1998, 16,8: 737-742<br />
Schütze K, Becker I, Becker KF, Thalhammer S, Stark R, Heckl WM, Böhm M and Pösl H<br />
Cut out or poke in - the key to the world of single genes: laser micromanipulation as a valuable<br />
tool on the look-out for the origin of disease.<br />
Gen Anal, 1997, 14: 1-8<br />
Schütze K, Böhm M, Thalhammer S, Stark R, Heckl W and Pösl H<br />
Laser Mikroablation für die Genanalyse auf Einzelzellbasis.<br />
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A new approach to the investigation of sexual offenses-cytoskeleton analysis reveals the<br />
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J Forensic Sci, 2010, 55,2: 492-498<br />
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Haematologica, 2010, 95,1: 153-137<br />
Schwarz C, Hauser P, Steininger R, Regele H, Heinze G, Mayer G and Oberbauer R<br />
Failure of BCL-2 up-regulation in proximal tubular epithel cells of donor kidney biopsy<br />
specimens is associated with apoptosis and delayed graft function.<br />
Lab Invest, 2002, 82,7: 941-948<br />
October 2012 62/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Schwering I, Bräuninger A, Distler V, Jesdinsky J, Diehl V, Hansmann ML, Rajewsky K and Küppers R<br />
Profiling of Hodgkin’s lymphoma cell line L1236 and germinal center B Cells: Identification of<br />
Hodgkin’s lymphoma-specific genes.<br />
Moleculare Medicine, 2003, 9,3/4: 85-95<br />
Seidl S, Burgemeister R, Hausmann R and Betz P<br />
Contact-free isolation of sperm and epithelial cells by Laser Microdissection and Pressure<br />
Catapulting.<br />
Forensic Sci Med Pathol, 2005, V1-2: 153-158<br />
Seitz G, Warmann SW, Fuchs J, Heitmann H, Mahrt J, Busse AC, Ruck P, Hoffman RM and Wessels JT<br />
Imaging of cell trafficking and metastases of paediatric rhabdomyosarcoma.<br />
Cell Prolif, 2008, 41,2: 365-374<br />
Seitz G, Warmann SW, Fuchs J, Mau-Holzmann UA, Ruck P, Heitmann H, Hoffman RM, Mahrt J, Müller GA<br />
and Wessels JT<br />
Visualization of xenotransplanted human rhabdomyosarcoma after transfection with red<br />
fluorescent protein.<br />
J Pediatr Surg, 2006, 41,8: 1369-1376<br />
Sekizawa A, Purwosunu Y, Yoshimura S, Nakamura M, Shimizu H, Okai T, Rizzo N and Farina A<br />
PP13 mRNA expression in trophoblasts from preeclamptic placentas.<br />
Reprod Sci, 2009, 16,4: 408-413<br />
Seo JY, Lee SH, Youn CS, Choi HR, Rhie GE, Cho KH, Kim KH, Park KC, Eun HC and Chung JH<br />
Ultraviolet radiation increases tropoelastin mRNA expression in the epidermis of human skin<br />
in vivo.<br />
J Invest Dermatol, 2001, 116: 915-919<br />
Serinsöz E, Bock O, Gwinner W, Schwarz A, Haller H, Kreipe H and Mengel M<br />
Local complement C3 expression is upregulated in humoral and cellular rejection of renal<br />
allografts.<br />
Am J Transplant, 2005, 5: 1490-1494<br />
Sethi N and Palefsky J<br />
Transcriptional profiling of dysplastic lesions in K14-HPV16 transgenic mice using laser<br />
microdissection.<br />
FASEB J, 2004, 18: 1243-1245<br />
Seto J, Gupta HS, Zaslansky P, Wagner HD and Fratzl P<br />
Tough lessons from bone: extreme mechanical anisotropy at the mesoscale.<br />
Adv Funct Mater, 2008, 18: 1905-1911<br />
Sevilla-Pérez J, Königshoff M, Kwapiszewska G, Amarie OV, Seeger W, Weissmann N, Schermuly RT,<br />
Morty RE and Eickelberg O<br />
Shroom expression is attenuated in pulmonary arterial hypertension.<br />
Eur Respir J, 2008, 32,4: 871-880<br />
Shao G, Lilli DR, Patterson-Fortin J, Coleman KA, Morrissey DE and Greenberg RA<br />
The Rap80-BRCC36 de-ubiquitinating enzyme complex antagonizes RNF8-Ubc13-dependent<br />
ubiquitination events at DNA double strand breaks.<br />
PNAS USA, 2009, 106,9: 3166-3171<br />
Shaikhibrahim Z, Lindstrot A, Ellinger J, Rogenhofer S, Buettner R and Wernert N<br />
Genes differentially expressed in the peripheral zone compared to the transitional zone of the<br />
normal human prostate and their potential regulation by ETS factors.<br />
Mol Med Report, 2012, 5,1: 32-36<br />
Shi C, Hong SM, Lim P, Kamiyama H, Khan M, Anders RA, Goggins M, Hruban RH and Eshleman JR<br />
KRAS2 mutations in human pancreatic acinar-ductal metaplastic lesions are limited to those<br />
with PanIN: implications for the human pancreatic cancer cell of origin.<br />
Mol Cancer Res, 2009, 7,2: 230-236<br />
Shi X, Kleeff J, Zhu ZW, Schmied B, Tang WH, Zimmermann A, Büchler M and Friess H<br />
Gene-expression analysis of single cells-nested polymerase chain reaction after laser<br />
microdissection.<br />
World J Gastroenterol, 2003, 9,6: 1337-1341<br />
October 2012 63/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Shima I, Katsuda S, Ueda Y, Takahashi N and Sasaki H<br />
Expression of matrix metalloproteinases in wound healing after glaucoma filtration surgery in<br />
rabbits.<br />
Ophthalmic Res, 2007, 39,6: 315-324<br />
Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M,<br />
Cremer T and Goldman RD<br />
The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization<br />
and transcription.<br />
Genes Dev, 2008, 22,24: 3409-3421<br />
Shimoyamada H, Yazawa T, Sato H, Okudela K, Ishii J, Sakaeda M, Kashiwagi K, Suzuki T, Mitsui H, Woo<br />
T, Tajiri M, Ohmori T, Ogura T, Masuda M, Oshiro H and Kitamura H<br />
Early growth response-1 induces and enhances vascular endothelial growth factor-A<br />
expression in lung cancer cells.<br />
Am J Pathol, 2010, 177,1: 70-83<br />
Simi L, Sestini R, Ferruzzi P, Gaglianò MS, Gensini F, Mascalchi M, Guerrini L, Pratesi C, Pinzani P, Nesi G,<br />
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Phenotype variability of neural crest derived tumours in six italian families segregating the<br />
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Cytogenetic analysis of multifocal bladder cancer supports a monoclonal origin and<br />
intraepithelial spread of tumor cells.<br />
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Simonin Y, Perrin FE and Kato AC<br />
Axonal involvement in the Wlds neuroprotective effect: analysis of pure motoneurons in a<br />
mouse model protected from motor neuron disease at a pre-symptomatic age.<br />
J Neurochem, 2007, 101: 530-542<br />
Singh AK, Riederer B, Krabbenhöft A, Rausch B, Bonhagen J, Lehmann U, de Jonge HR, Donowitz M, Yun<br />
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Differential roles of NHERF1, NHERF2, and PDZK1 in regulating CFTR-mediated intestinal anion<br />
secretion in mice.<br />
J Clin Invest, 2009, 119,3: 540-550<br />
Sipos F, Muzes G, Valcz G, Galamb O, Tóth K, Leiszter K, Krenács T, Tulassay Z and Molnár B<br />
Regeneration associated growth factor receptor and epithelial marker expression in lymphoid<br />
aggregates of ulcerative colitis.<br />
Scand J Gastroenterol, 2010, 45,4: 440-448<br />
Skrzypczak M, Goryca K, Rubel T, Paziewska A, Mikula M, Jaroz D, Pachlewski J, Oledzki J and Ostrowsk J<br />
Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data<br />
directed for maximization of analytical reliability.<br />
PLoS One, 2010, 5,10: e13091<br />
Skuljec J, Gudi V, Ulrich R, Frichert K, Yildiz O, Pul R, Voss EV, Wissel K, Baumgärtner W and Stangel M<br />
Matrix metalloproteinases and their tissue inhibitors in cuprizone-induced demyelination and<br />
remyelination of brain white and gray matter.<br />
J Neuropathol Exp Neurol, 2011, 70,9: 758-769<br />
Slavova N, Drescher A, Visekruna A, Dullat S, Kroesen AJ, Ritz JP and Buhr HJ<br />
NALP expression in Paneth cells provides a novel track in IBD signaling.<br />
Langenbecks Arch Surg, 2010, 395,4: 351-357<br />
Slevin M, Turu MM, Rovira N, Luque A, Baldellou M, Krupinski J and Badimon L<br />
Identification of a 'snapshot' of co-expressed angiogenic markers in laser-dissected vessels<br />
from unstable carotid plaques with targeted arrays.<br />
J Vasc Res, 2009, 47,4: 323-335<br />
October 2012 64/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Slevin M, Krupinski J, Rovira N, Turu M, Luque A, Baldellou M, Sanfeliu C, de Vera N and Badimon L<br />
Identification of pro-angiogenic markers in blood vessels from stroked-affected brain tissue<br />
using laser-capture microdissection.<br />
BMC Genomics, 2009,10: 113<br />
Slotta-Huspenina J, Koch I, Richter M, Bink K, Kremer M, Specht K, Krugmann J, Quintanilla-Martinez L<br />
and Fend F<br />
Cyclin D1 positive multiple myeloma: predominance of the short, 3'UTR-deficient transcript is<br />
associated with high cyclin D1 mRNA levels in cases with t(11;14) translocation, but does not<br />
correlate with proliferation rate or genomic deletions.<br />
Leuk Res, 2008, 32,1: 79-88<br />
Smith B, Bodé S, Petersen BL, Jensen TK, Pipper C, Kloppenborg J, Boyé M, Krogfelt KA and Mølbak L<br />
Community analysis of bacteria colonizing intestinal tissue of neonates with necrotizing<br />
enterocolitis.<br />
BMC Microbiol. 2011, 12; 11:73<br />
Snoei J, Urbach H, Engels G, Fassunke J, von Lehe M, Becker AJ and Majores M<br />
Genetic alterations of protein-o-mannosyltransferase-1 in glioneuronal and glial brain tumors<br />
with subarachnoid spread.<br />
Neuropathology, 2009, 29,2: 116-124<br />
Sodir NM, Swigart LB, Karnezis AN, Hanahan D, Evan GI and Soucek L<br />
Endogenous Myc maintains the tumor microenvironment.<br />
Genes Dev, 2011, 25,9: 907-916<br />
Sohn P, Cox M, Chen D and Serra R<br />
Molecular profiling of the developing mouse axial skeleton: A role for Tgfbr2 in the<br />
development of the intervertebral disc.<br />
BMC Dev Biol, 2010, 10, 29<br />
Sokolova YY, McNally LR, Fuxa JR and Vinson SB<br />
Spore morphotypes of Thelohania solenopsae (microsporida) described microscopically and<br />
confirmed by PCR of individual spores microdissected from smears by position ablative laser<br />
microbeam microscopy.<br />
Microbiology, 2004, 150: 1261-1270<br />
Sokolova YY, McNally LR and Fuxa JR<br />
PCR-based analysis of spores isolated from smears by Laser Pressure Catapult Microdissection<br />
confirms genetic identity of spore morphotypes of the microsporidian Thelohania solenopsae.<br />
Eukaryot Microbiol, 2003, 50: 584-585<br />
Solakoglu O, Maierhofer C, Lahr G, Breit E, Scheunemann P, Heumos I, Pichlmeier U, Schlimok G,<br />
Oberneder R, Köllermann MW, Köllermann J, Speicher MR and Pantel K<br />
Heterogenous proliferative potential of occult metastatic cells in bone marrow of patients with<br />
solid epithelial tumors.<br />
PNAS, 2002, 99,4: 2246-2251<br />
Soltani-Arabshahi R, Leboeuf C, Rivet J, Pisonero H, Zhao WL, Bachelez H, Ameisen JC and Janin A<br />
Bcl-xL gene expression correlated with lower apoptotic cell numbers and shorter progressionfree<br />
survival in PCFCL.<br />
J Invest Dermatol, 2009, 129,7: 1703-1709<br />
Sommerer F, Hengge UR, Markwarth A, Vomschloss S, Stolzenburg JU, Wittekind C and Tannapfel A<br />
Mutations of BRAF and RAS are rare events in germ cell tumours.<br />
Int J Cancer, 2005, 113,2: 329-335<br />
Sorrentino C, Musiani P, Pompa P, Cipollone G, Di <strong>Carl</strong>o E.<br />
Androgen deprivation boosts prostatic infiltration of cytotoxic and regulatory T lymphocytes<br />
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Expression of IL-32 in human lung cancer is related to the histotype and metastatic<br />
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Am J Respir Crit Care Med, 2009, 180,8: 769-779<br />
October 2012 65/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Sotlar K, Colak S, Bache A, Berezowska S, Krokowski M, Bültmann B, Valent P and Horny HP<br />
Variable presence of KIT D816V in clonal haematological non-mast cell lineage diseases<br />
associated with systemic mastocytosis (SM-AHNMD).<br />
J Pathol, 2010, 220,5: 586-595<br />
Sotlar K, Bache A, Stellmacher F, Bültmann B, Valent P and Horny HP<br />
Systemic mastocytosis associated with chronic idiopathic myelofibrosis: a distinct subtype of<br />
systemic mastocytosis associated with a [corrected] clonal hematological non-mast<br />
[corrected] cell lineage disorder carrying the activating point mutations KITD816V and<br />
JAK2V617F.<br />
J Mol Diagn, 2008, 10,1: 58-66<br />
Sotlar K, Fridrich C, Mall A, Jaussi R, Bültmann B, Valent P and Horny HP<br />
Detection of c-kit point mutation ASP-816�Val in microdissected pooled single mast cells and<br />
leukemic cells in a patient with systemic mastocytosis and concomitant chronic<br />
myelomonocytic leukemia.<br />
Leukemia Res, 2002, 26: 979-984<br />
Specht K, Kremer M, Müller U, Dirnhofer S, Rosemann, M, Höfler H, Quintanilla-Martinez L and Fend F<br />
Identification of cyclin D1 mRNA overexpression in B-cell neoplasias by real-time reverse<br />
transcription–PCR of microdissected paraffin sections.<br />
Clin Cancer Res, 2002, 8: 2902-2911<br />
Specht K, Richter T, Müller U, Walch A, Werner M and Höfler H<br />
Quantitative gene expression analysis in microdissected archival formalin-fixed and paraffinembedded<br />
tumor tissue.<br />
Am J Pathol, 2001, 158,2: 419-429<br />
Spee B, Carpino G, Schotanus BA, Katoonizadeh A, Vander Borght S, Gaudio E and Roskams T<br />
Characterisation of the activated liver progenitor cell niche, potential involvement of Wnt and<br />
Notch signalling.<br />
Gut, 2010, 59,2: 247-257<br />
Spinnler K, Köhn FM, Schwarzer U and Mayerhofer A<br />
Glial cell line-derived neurotrophic factor is constitutively produced by human testicular<br />
peritubular cells and may contribute to the spermatogonial stem cell niche in man.<br />
Hum Reprod, 2010, 25,9: 2181-2187<br />
Springer J, McGregor GP, Fink L and Fischer A<br />
Alternative splicing in single cells dissected from complex tissues: separate expression of<br />
prepro-tachykinin A mRNA splice variants in sensory neurones.<br />
J Neurochem, 2003, 85: 882-888<br />
Srivastava AC, Palanichelvam K, Ma J, Steele J, Blancaflor EB and Tang Y<br />
Collection and analysis of expressed sequence tags derived from laser capture microdissected<br />
Switchgrass (Panicum virgatum L. Alamo) vascular tissues.<br />
Bioenerg Res, 2010, 3: 278-294<br />
Stadlbauer TH, Wagner A, Hölschermann H, Fiedel S, Fingerhuth H, Tillmanns H, Bohle RM and Hecker M<br />
AP-1 and STAT-1 decoy oligodeoxynucleotides attenuate transplant vasculopathy in rat cardiac<br />
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Staquicini F, Pasqualini R and Arap W<br />
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Steger K, Fink L, Klonisch T, Bohle RM and Bergmann M<br />
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Histochem Cell Biol, 2002, 117: 227-234<br />
Steilmann C, Cavalcanti MC, Bergmann M, Kliesch S, Weidner W and Steger K<br />
Aberrant mRNA expression of chromatin remodelling factors in round spermatid maturation<br />
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Mol Hum Reprod, 2010, 16,10: 726-733<br />
October 2012 66/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Steinmetz OM, Panzer U, Fehr S, Meyer-Schwesinger C, Stahl RA and Wenzel UO<br />
A pitfall of glomerular sieving: profibrotic and matrix proteins derive from the Bowman's<br />
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Nephrol Dial Transplant, 2007, 22,10: 3055-3060<br />
Steinmetz OM, Sadaghiani S, Panzer U, Krebs C, Meyer-Schwesinger C, Streichert T, Fehr S, Hamming I,<br />
van Goor H, Stahl RAK and Wenzel U<br />
Antihypertensive therapy induces compartment specific chemokine expression and a Th1<br />
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Am J Physiol Renal Physiol, 2007, 292,2: F876-887<br />
Stemmer K and Dietrich DR<br />
Application of laser-capture microdissection to study renal carcinogenesis.<br />
Methods Mol Biol, 2011, 755: 279-290<br />
Stemmer K, Ellinger-Ziegelbauer H, Ahr HJ and Dietrich DR<br />
Molecular characterization of preneoplastic lesions provides insight on the development of<br />
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Stemmer K, Ellinger-Ziegelbauer H, Lotz K, Ahr HJ and Dietrich DR<br />
Establishment of a protocol for the gene expression analyis of laser microdissected rat kidney<br />
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Stewart L, Hindmarch CC, Qiu J, Tung YC, Yeo GS and Murphy D<br />
Hypothalamic transcriptome plasticity in two rodent species reveals divergent differential<br />
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Stierum R, Burgemeister R, van Helvoort A, Peijnenburg A, Schütze K, Seidelin M, Vang O and van<br />
Ommen B<br />
Functional foods against colorectal cancer. An example project integrating functional<br />
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Nutr Metab Cardiovasc Dis, 2001, 11,4: 94-98<br />
Stocker CJ, Wargent ET, Martin-Gronert MS, Cripps RL, O'Dowd JF, Zaibi MS, Cottrell EC, Mercer JG,<br />
Duncan JS, Cawthorne MA, Ozanne SE, Arch JR.<br />
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Lab Inverst, 2004, 84: 465-478<br />
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Oncol Rep, 2004, 11: 137-141<br />
October 2012 67/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Stoehr R, Wild P and Hartmann A<br />
Lasermicrodissection – An important prerequisite for the molecular-genetic analysis of bladder<br />
cancer.<br />
Pathol Res Pract, 2003, 199: 355-362<br />
Stoehr R, Knuechel R, Boecker J, Blaszyk H, Schmitt R, Filbeck T, Hofstaedter F and Hartmann A<br />
Histologic-genetic mapping by allele-specific PCR reveals intraurothelial spread of p53 mutant<br />
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Lab Invest, 2002, 82,11: 1553-1561<br />
Stoehr R, Krieg R, Knuechel R, Hofstaedter F, Pilarsky C, Zaak D, Schmitt R and Hartmann A<br />
No evidence for involvement of ß-catenin and APC in urothelial carcinomas.<br />
Int J Oncol, 2002, 20: 905-911<br />
Stoehr R, Hartmann A, Hindlmeyer E, Mürle K, Wieland W and Knuechel R<br />
Oligoclonality of early lesions of the urothelium as determined by microdissection-supported<br />
genetic analysis.<br />
Pathobiology, 2000, 68: 165-172<br />
Stolle K, Weitkamp B, Rauterberg J, Lorkowski S and Cullen P<br />
Laser microdissection-based analysis of mRNA expression in human coronary arteries with<br />
intimal thickening.<br />
J Histochem Cytochem, 2004, 52,11: 1511-1518<br />
Stybayeva G, Zhu H, Ramanculov E, Dandekar S, George M and Revzin A<br />
Micropatterned co-cultures of T-lymphocytes and epithelial cells as a model of mucosal<br />
immune system.<br />
Biochem Biophys Res Commun, 2009, 380,3: 575-580<br />
Subramaniam MM, Ng SB, Seah SB, Anuar D, Soong R and Lee VK<br />
Molecular characterization of dedifferentiated mucoepidermoid carcinoma of the trachea using<br />
laser microdissection-based TP53 mutation analysis.<br />
Histopathology, 2009, 55,4: 472-475<br />
Sukhotnik I, Mogilner JG, Shaoul R, Karry R, Lieber M, Suss-Toby E, Ure BM and Coran AG<br />
Responsiveness of intestinal epithelial cell turnover to TGF-alpha after bowel resection in a rat<br />
is correlated with EGF receptor expression along the villus-crypt axis.<br />
Pediatr Surg Int, 2008, 24,1: 21-28<br />
Sun Y, Shukla GS, Weaver D, Pero SC and Krag DN<br />
Phage-display selection on tumor histological specimens with laser capture microdissection.<br />
J Immunol Methods, 2009, 347,1-2: 46-53<br />
Svrcek M, Buhard O, Colas C, Coulet F, Dumont S, Massaoudi I, Lamri A, Hamelin R, Cosnes J, Oliveira C,<br />
Seruca R, Gaub MP, Legrain M, Collura A, Lascols O, Tiret E, Fléjou J and Duval A<br />
Methylation tolerance due to an O 6 -methylguanine DNA methyltransferase (MGMT) field defect<br />
in the colonic mucosa: an initiating step in the development of mismatch repair-deficient<br />
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Gut, 2010, 59,11: 1516-1526<br />
Szatanek R, Drabik G, Baran J, Kolodziejczyk P, Kulig J, Stachura J and Zembala M<br />
Detection of isolated tumour cells in the blood and bone marrow of patients with gastric<br />
cancer by combined sorting, isolation and determination of MAGE-1, -2 mRNA expression.<br />
Oncol Rep, 2008, 19,4: 1055-1060<br />
Tachikawa T and Irié T<br />
A new molecular biology approach in morphology: basic method and application of laser<br />
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Mod Electron Microsc, 2004, 37: 82-88<br />
Tamburrino L, Salvianti F, Marchiani S, Pinzani P, Nesi G, Serni S, Forti G, Baldi E.<br />
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October 2012 68/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Tanaka T<br />
Quantitative analysis of the enzymes associated with 5-fluorouracil metabolism in prostate<br />
cancer biopsies.<br />
Methods Mol Biol, 201, 755: 301-305<br />
Tanaka T, Kawashima H, Matsumura K, Yamashita-Hosono T, Yoshimura R, Kuratsukuri K, Harimoto K,<br />
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Overexpression of orotate phosphoribosyl transferase in hormone-refractory prostate cancer.<br />
Oncol Rep, 2009, 21,1: 33-37<br />
Tannapfel A, Sommerer F, Benicke M, Katalinic A, Uhlmann D, Witzigmann H, Hauss J and Wittekind C<br />
Mutations of the BRAF gene in cholangiocarcinoma but not in hepatocellular carcinoma.<br />
Gut, 2003, 52: 706-712<br />
Tashiro S, Walter J, Shinohara A, Kamada N and Cremer T<br />
Rad51 Accumulation at sites of DNA damage and in postreplicative chromatin.<br />
J Cell Biol, 2000, 150,2: 283-291<br />
Teramoto K, Negoro N, Kitamoto K, Iwai T, Iwao H, Okamura M and Miura K<br />
Microarray analysis of glomerular gene expression in murine lupus nephritis.<br />
J Pharmacol Sci, 2008, 106,1: 56-67<br />
Teshima T, Hara Y, Takekoshi S, Teramoto A, Osamura RY and Tagawa M<br />
Expression of genes related to corticotropin production and glucocorticoid feedback in<br />
corticotroph adenomas of dogs with Cushing's disease.<br />
Domest Anim Endocrinol, 2009, 36,1: 3-12<br />
Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />
Laser microtools in cell biology and molecular medicine.<br />
Laser Physics, 2003, 13: 681-691<br />
Thelen P, Burfeind P, Grzmil M, Voigt S, Ringert RH and Hemmerlein B<br />
cDNA microarray analysis with amplified RNA after isolation of intact cellular RNA from<br />
neoplastic and non-neoplastic prostate tissue separated by laser microdissections.<br />
Int J Oncol, 2004, 24: 1085-1092<br />
Theophile K, Jonigk D, Kreipe H and Bock O<br />
Amplification of mRNA from laser-microdissected single or clustered cells in formalin-fixed<br />
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Diagn Mol Pathol, 2008, 17,2: 101-106<br />
Thiel J, Hollmann J, Rutten T, Weber H, Scholz U, Weschke W.<br />
454 transcriptome sequencing suggests a role for two-component signalling in cellularization<br />
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Different hormonal regulation of cellular differentiation and function in nucellar projection and<br />
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Plant Physiol, 2008, 148,3: 1436-1452<br />
Thirlwell C, Will OC, Domingo E, Graham TA, McDonald SA, Oukrif D, Jeffrey R, Gorman M, Rodriguez-<br />
Justo M, Chin-Aleong J, Clark SK, Novelli MR, Jankowski JA, Wright NA, Tomlinson IP and Leedham SJ<br />
Clonality assessment and clonal ordering of individual neoplastic crypts shows polyclonality of<br />
colorectal adenomas.<br />
Gastroenterology, 2010, 138,4: 1441-1454<br />
October 2012 69/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Thiyagarajan D, Fismen S, Seredkina N, Jacobsen S, Elung-Jensen T, Kamper AL, Fenton CG, Rekvig OP,<br />
Mortensen ES.<br />
Silencing of renal DNaseI in murine lupus nephritis imposes exposure of large chromatin<br />
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Thompson KA, Cherry CL, Bell JE andMcLean CA<br />
Brain cell reservoirs of latent virus in presymptomatic HIV-infected individuals.<br />
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Thompson KA, Varrone JJ, Jankovic-Karasoulos T, Wesselingh SL and McLean CA<br />
Cell-specific temporal infection of the brain in a simian immunodeficiency virus model of<br />
human immunodeficiency virus encephalitis.<br />
J Neurovirol, 2009, 15: 300-311<br />
Thuret R, Chantrel-Groussard K, Azzouzi AR, Villette JM, Guimard S, Teillac P, Berthon P, Houlgatte A,<br />
Latil A and Cussenot O<br />
Clinical relevance of genetic instability in prostatic cells obtained by prostatic massage in early<br />
prostate cancer.<br />
Br J Cancer, 2005, 92,2: 236-240<br />
Tian XF, Fan XG, Zhang Y, Huang Y, Dai H and Ying RS<br />
Procuration and identification of bacteria in paraffin-embedded liver tissues of hepatocellular<br />
carcinoma by laser-assisted microdissection technique.<br />
APMIS, 2008, 116,1: 10-15<br />
Tidow N, Boecker A, Schmidt H, Agelopoulos K, Boecker W, Buerger H and Brandt B<br />
Distinct amplification of an untranslated regulatory sequence in the egfr gene contributes to<br />
early steps in breast cancer development.<br />
Cancer Res, 2003, 63,6: 1172-1178<br />
Timmer M<br />
Neurobiological mechanisms involved in the establishment and maintenance of ominance<br />
hierarchies and its modulation by stress in rats.<br />
Thesis, 2011, 1-150.<br />
Todd R and Margolin DH<br />
Challenges of single-cell diagnostics: analysis of gene expression.<br />
TRENDS in Molecular Medicine, 2002, Research Update, 8,6: 254-257<br />
Tomikawa J, Uenoyama Y, Ozawa M, Fukanuma T, Takase K, Goto T, Abe H, Ieda N, Minabe S, Deura C,<br />
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Epigenetic regulation of Kiss1 gene expression mediating estrogen-positive feedback action in<br />
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Generating induced pluripotent stem cells from common marmoset (Callithrix jacchus) fetal<br />
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Genes Cells, 2010, 15,9: 959-969<br />
Tomita N, Nakamura N, Kanamori H, Fujimaki K, Fujisawa S, Ishigatsubo Y and Nomura K<br />
Atypical Burkitt lymphoma arising from follicular lymphoma: demonstration by polymerase<br />
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Tommeras K, Bakke I, Sandvik AK, Larsson E and Waldum HL<br />
Rat parietal cells express CCK 2 receptor mRNA: gene expression analysis of single cells<br />
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Biochem Biophys Res Commun, 2002, 297,2: 335-340<br />
October 2012 70/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Toriumi K, Mouri A, Narusawa S, Aoyama Y, Ikawa N, Lu L, Nagai T, Mamiya T, Kim HC, Nabeshima T.<br />
Prenatal NMDA receptor antagonism impaired proliferation of neuronal progenitor, leading to<br />
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Torkos A, Wissel K, Warnecke A, Lenarz T and Stöver T<br />
Technical report: Laser microdissection and pressure catapulting is superior to conventional<br />
manual dissection for isolating pure spiral ganglion fractions from the cochlea.<br />
Hear Res, 2008, 235(1-2): 8-14<br />
Tort F, Hernàndez S, Beà S, Martínez A, Esteller M, Herman JG, Puig X, Camacho E, Sánchez M, Nayach<br />
I, Lopez-Guillermo A, Fernández PL, Colomer D, Hernàndez L and Campo E<br />
CHK2-decreased protein expression and infrequent genetic alterations mainly occur in<br />
aggressive types of non-Hodgkin lymphomas.<br />
Blood, 2002, 100,13: 4602-4608<br />
Torti S, Fornara F, Vincent C, Andrés F, Nordström K, Göbel U, Knoll D, Schoof H, Coupland G.<br />
Analysis of the Arabidopsis shoot meristem transcriptome during floral transition identifies<br />
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Plant Cell. 2012 Feb 10. [Epub ahead of print] PubMed<br />
Tsubaki T, Arita N, Kawakami T, Shiratsuchi T, Yamamoto H, Takubo N, Yamada K, Nakata S, Yamamoto<br />
S and Nose M<br />
Characterization of histopathology and gene-expression profiles of synovitis in early<br />
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Arthritis Res Ther, 2005, 7,4: R825-836<br />
Tsubaki T, Takegawa S, Hanamoto H, Arita N, Kamogawa J, Yamamoto H, Takubo N, Nakata S, Yamada<br />
K, Yamamoto S, Yoshie O and Nose M<br />
Accumulation of plasma cells expressing CXCR3 in the synovial sublining regions of early<br />
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Clin Exp Immunol, 2005, 141: 363-371<br />
Tsukamoto Y, Usui M, Yamamoto G, Takagi Y, Tachikawa T, Yamamoto M, Nakamura M.<br />
Role of the junctional epithelium in periodontal innate defense and homeostasis.<br />
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Tullet JMA, Pocock V, Steel JH, White R, Milligan S and Parker MG<br />
Multiple signaling defects in the absence of RIP140 impair both cumulus expansion and follicle<br />
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Endocrinology, 2005, 146,9: 4127-4137<br />
Tung YC, Ma M, Piper S, Coll A, O'Rahilly S and Yeo GS<br />
Novel leptin-regulated genes revealed by transcriptional profiling of the hypothalamic<br />
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J Neurosci, 2008, 28,47: 12419-12426<br />
Uchida K, Schneider S, Yochim JM, Kuramochi H, Hayashi K, Takasaki K, Yang D, Danenberg KD and<br />
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Intratumoral COX-2 gene expression is a predictive factor for colorectal cancer response to<br />
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Ukawala M, Chaudhari K, Rajyaguru T, Manjappa AS, Murthy RS, Gude R.<br />
Laminin receptor-targeted etoposide loaded polymeric micelles: a novel approach for the<br />
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Modified immunohistological staining allows detection of Ziehl-Neelsen-negative<br />
Mycobacterium tuberculosis organims and their precise localization in human tissue.<br />
J Pathol, 2005, 205: 633-640<br />
October 2012 71/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Uneyama C, Shibutani M, Masutomi N, Takagi H and Hirose M<br />
Methacarn fixation for genomic DNA analysis in microdissected, paraffin-embedded tissue<br />
specimens.<br />
J Histochem Cytochem, 2002, 50: 1237-1245<br />
Vandewoestyne M, Van Nieuwerburgh F, Van Hoofstat D and Deforce D<br />
Evaluation of three DNA extraction protocols for forensic STR typing after laser capture<br />
microdissection.<br />
Forensic Sci Int Genet, 2011, in press<br />
Vandewoestyne M, Heindryckx B, Lepez T, Van Coster R, Gerris J, De Sutter P and Deforce D<br />
Polar body mutation load analysis in a patient with A3243G tRNALeu(UUR) point mutation.<br />
Mitochondrion, 2011, 11,4: 626-629<br />
Vandewoestyne M, Kumps C, Swerts K, Menten B, Lammens T, Philippé J, De Preter K, Laureys G, Van<br />
Roy N, Speleman F and Deforce D<br />
Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment<br />
risk assessment by array comparative genomic hybridization.<br />
Int J Cancer, 2011, in press<br />
Vandewoestyne ML, Pede VC, Lambein KY, Dhaenens MF, Offner FC, Praet MM, Philippé JJ, Kipps TJ and<br />
Deforce DL<br />
Laser microdissection for the assessment of the clonal relationship between chronic<br />
lymphocytic leukemia/small lymphocytic lymphoma and proliferating B cells within lymph<br />
node pseudofollicles.<br />
Leukemia, 2011, in press<br />
Vandewoestyne M and Deforce D<br />
Laser capture microdissection in forensic research: a review.<br />
Int J Legal Med, 2010, 124,6: 513-521<br />
Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />
Automatic detection of spermatozoa for laser capture microdissection.<br />
Int J Legal Med, 2009, 123,2: 169-175<br />
Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />
Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and<br />
laser microdissection for STR profiling of male cells in male/female mixtures.<br />
Int J Legal Med, 2009, 123,5: 441-447<br />
Van Oorschot RA, Ballantyne KN and Mitchell RJ<br />
Forensic trace DNA: a review.<br />
Investig Genet, 2010, 1,1:14<br />
Van Oterendorp C, Lorber B, Jovanovic Z, Yeo G, Lagrèze WA and Martin KR<br />
The expression of dynein light chain DYNLL1 (LC8-1) is persistently downregulated in<br />
glaucomatous rat retinal ganglion cells.<br />
Exp Eye Res, 2011, 92,2: 138-146<br />
van Veelen W, van Gasteren CJ, Acton DS, Franklin DS, Berger R, Lips CJ and Höppener JW<br />
Synergistic effect of oncogenic RET and loss of p18 on medullary thyroid carcinoma<br />
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Cancer Res, 2008, 68,5: 1329-1337<br />
Varna M, Soliman H, Feugeas JP, Turpin E, Chapelin D, Legrès L, Plassa LF, de Roquancourt A, Espié M,<br />
Misset JL, Janin A, de Thé H and Bertheau P<br />
Changes in allelic imbalances in locally advanced breast cancers after chemotherapy.<br />
Br J Cancer, 2007, 97,8: 1157-1164<br />
Vellani V, Colucci M, Lattanzi R, Giannini E, Negri L, Melchiorri P and McNaughton PA<br />
Sensitization of transient receptor potential vanilloid 1 by the prokineticin receptor agonist<br />
Bv8.<br />
J Neurosci, 2006, 26,19: 5109-5116<br />
October 2012 72/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Vermaat JS, Nijman IJ, Koudijs MJ, Gerritse FL, Scherer SJ, Mokry M, Roessingh WM, Lansu N, de Bruijn<br />
E, van Hillegersberg R, van Diest PJ, Cuppen E, Voest EE.<br />
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Laser Microdissection<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
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Laser Microdissection<br />
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Laser Microdissection<br />
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Laser Microdissection<br />
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Laser Microdissection<br />
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Laser Microdissection<br />
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Guan X, Lee JJ, Pang M, Shi X, Stelly DM and Chen ZJ<br />
Activation of Arabidopsis seed hair development by cotton fiber-related genes.<br />
PLoS One, 2011, 6,7: e21301<br />
Guenin S, Mouallif M, Deplus R, Lampe X, Krusy N, Calonne E, Delbecque K, Kridelka F, Fuks F, Ennaji<br />
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Harris L, Wayland M, Lan M, Ryan M, Giger T, Lockstone H, Wuethrich I, Mimmack M, Wang L, Kotter M,<br />
Craddock R and Bahn S<br />
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PLoS ONE, 2008, 3,12: e3964<br />
Hartmann S, Martin-Subero JI, Gesk S, Hüsken J, Giefing M, Nagel I, Riemke J, Chott A, Klapper W,<br />
Parrens M, Merlio JP, Küppers R, Bräuninger A, Siebert R and Hansmann ML<br />
Detection of genomic imbalances in microdissected Hodgkin and Reed-Sternberg cells of<br />
classical Hodgkin's lymphoma by array-based comparative genomic hybridization.<br />
Haematologica, 2008, 93,9: 1318-1326<br />
Hasselblatt M, Mertsch S, Koos B, Riesmeier B, Stegemann H, Jeibmann A, Tomm M, Schmitz N, Wrede<br />
B, Wolff JE, Zheng W and Paulus W<br />
TWIST-1 is overexpressed in neoplastic choroid plexus epithelial cells and promotes<br />
proliferation and invasion.<br />
Cancer Res, 2009, 69,6: 2219-2223<br />
Hayashi Y, Matsunaga T, Yamamoto G, Nishii K, Usui M, Yamamoto M and Tachikawa T<br />
Comprehensive analysis of gene expression in the junctional epithelium by laser microdissection<br />
and microarray analysis.<br />
J Periodontal Res, 2010, 45,5: 618-625<br />
Heisler L, Pronchuk N, Nonogaki K, Zhou L, Raber J, Tung L, Yeo G, O'Rahilly S, Colmers WF, Elmquist JK<br />
and Tecott LH<br />
Serotonin activates the hypothalamic-pituitary-adrenal axis via serotonin 2C receptor<br />
stimulation.<br />
J Neurosci, 2007, 27,26: 6956-6964<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Hodgin JB, Borczuk AC, Nasr SH, Markowitz GS, Nair V, Martini S, Eichinger F, Vining C, Berthier CC,<br />
Kretzler M and d'Agati VD<br />
A molecular profile of focal segmental glomerulosclerosis from formalin-fixed, paraffinembedded<br />
tissue.<br />
Am J Pathol, 2010, 177,4: 1674-1686<br />
Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N and Küster H<br />
Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots,<br />
including CAAT-box transcription factor gene expression correlating with fungal contact and<br />
spread.<br />
Plant Physiol, 2011, 157,4: 2023-2043<br />
Ho Hong S, Young Nah H, Yoon Lee J, Chan Gye M, Hoon Kim C and Kyoo Kim M<br />
Analysis of estrogen-regulated genes in mouse uterus using cDNA microarray and laser<br />
capture microdissection.<br />
J Endocrinol, 2004, 181: 157-167<br />
Hong SM, Vincent A, Kanda M, Leclerc J, Omura N, Borges M, Klein AP, Canto MI, Hruban RH, Goggins M.<br />
Genome-Wide Somatic Copy Number Alterations in Low-Grade PanINs and IPMNs from<br />
Individuals with a Family History of Pancreatic Cancer.<br />
Clin Cancer Res. 2012 Aug 15;18(16):4303-12. PubMed<br />
Hu C, Wei W, Chen X, Woodman CB, Yao Y, Nicholls JM, Joab I, Sihota SK, Shao JY, Derkaoui KD, Amari<br />
A, Maloney SL, Bell AI, Murray PG, Dawson CW, Young LS, Arrand JR.<br />
A global view of the oncogenic landscape in nasopharyngeal carcinoma: an integrated analysis<br />
at the genetic and expression levels.<br />
PLoS One. 2012;7(7):e41055. PubMed<br />
Hughes S, Pothecary CA, Jagannath A, Foster RG, Hankins MW, Peirson SN.<br />
Profound defects in pupillary responses to light in TRPM-channel null mice: a role for TRPM<br />
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Eur J Neurosci. 2012 Jan;35(1):34-43. doi: 10.1111/j.1460-9568.2011.07944.x. PubMed<br />
Huizar I, Malur A, Midgette YA, Kukoly C, Chen P, Ke PC, Podila R, Rao AM, Wingard CJ, Dobbs L, Barna<br />
BP, Kavuru MS and Thomassen MJ<br />
Novel murine model of chronic granulomatous lung inflammation elicited by carbon<br />
nanotubes.<br />
Am J Respir Cell Mol Biol, 2011, 45,4: 858-866<br />
Irié T, Aida T and Tachikawa T<br />
Gene expression profiling of oral squamous cell carcinoma using laser microdissection and<br />
cDNA microarray.<br />
Mod Electron Microsc, 2004, 37: 89-96<br />
Ivanidze J, Hoffmann R, Lochmüller H, Engel AG, Hohlfeld R and Dornmair K<br />
Inclusion body myositis: laser microdissection reveals differential up-regulation of IFN-γ<br />
signaling cascade in attacked versus nonattacked myofibers.<br />
Am J Pathol, 2011, 179,3: 1347-1359<br />
Jaeger J, Koczan D, Thiesen HJ, Ibrahim SM, Gross G, Spang R and Kunz M.<br />
Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in<br />
laser-microdissected melanoma tissues.<br />
Clin Cancer Res, 2007,13,3: 806-815<br />
Jovanovic Z, Tung YC, Lam BY, O'Rahilly S and Yeo GS<br />
Identification of the global transcriptomic response of the hypothalamic arcuate nucleus to<br />
fasting and leptin.<br />
J Neuroendocrinol, 2010, 22,8: 915-925<br />
Kang Y, Norris MH, Zarzycki-Siek J, Nierman WC, Donachie SP and Hoang TT<br />
Transcript amplification from single bacterium for transcriptome analysis.<br />
Genome Res, 2011, 21,6: 925-935<br />
Kayashima T, Nakata K, Ohuchida K, Ueda J, Shirahane K, Fujita H, Cui L, Mizumoto K and Tanaka M<br />
Insig2 is overexpressed in pancreatic cancer and its expression is induced by hypoxia.<br />
Cancer Sci, 2011, 102,6: 1137-1143<br />
October 2012 87/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kela I, Harmelin A, Waks T, Orr-Urtreger A, Domany E and Eshhar Z<br />
Interspecies comparison of prostate cancer gene-expression profiles reveals genes associated<br />
with aggressive tumors.<br />
Prostate, 2009, 69,10: 1034-1044<br />
Königshoff M, Kramer M, Balsara N, Wilhelm J, Amarie OV, Jahn A, Rose F, Fink L, Seeger W, Schaefer L,<br />
Günther A and Eickelberg O<br />
WNT1-inducible signaling protein-1 mediates pulmonary fibrosis in mice and is upregulated in<br />
humans with idiopathic pulmonary fibrosis.<br />
J Clin Invest, 2009, 119,4: 772-787<br />
Koos B, Bender S, Witt H, Mertsch S, Felsberg J, Beschorner R, Korshunov A, Riesmeier B, Pfister S,<br />
Paulus W and Hasselblatt M<br />
The transcription factor evi-1 is overexpressed, promotes proliferation, and is prognostically<br />
unfavorable in infratentorial ependymomas.<br />
Clin Cancer Res, 2011, 17,11: 3631-3637<br />
Kopper O, Giladi O, Golan-Lev T and Benvenisty N<br />
Characterization of gastrulation-stage progenitor cells and their inhibitory crosstalk in human<br />
embryoid bodies.<br />
Stem Cells, 2010, 28,1: 75-83<br />
Kuga D, Mizoguchi M, Guan Y, Hata N, Yoshimoto K, Shono T, Suzuki SO, Kukita Y, Tahira T, Nagata S,<br />
Sasaki T and Hayashi K<br />
Prevalence of copy number neutral LOH in glioblastomas revealed by genome-wide analysis of<br />
laser-microdissected tissues.<br />
Neuro Oncol, 2008, 10,6: 995-1003<br />
Labied S, Blacher S, Carmeliet P, Noël A, Frankenne F, Foidart JM and Munaut C<br />
Transient reduction of placental angiogenesis in PAI-1-deficient mice.<br />
Physiol Genomics, 2011, 43,4: 188-198<br />
Lajer CB, Garnæs E, Friis-Hansen L, Norrild B, Therkildsen MH, Glud M, Rossing M, Lajer H, Svane D,<br />
Skotte L, Specht L, Buchwald C, Nielsen FC.<br />
The role of miRNAs in human papilloma virus (HPV)-associated cancers: bridging between<br />
HPV-related head and neck cancer and cervical cancer.<br />
Br J Cancer. 2012 Apr 24;106(9):1526-34. PubMed PMID: 22472886. PubMed<br />
Laurén HB, Lopez-Picon FR, Brandt AM, Rios-Rojas CJ and Holopainen IE<br />
Transcriptome analysis of the hippocampal CA1 pyramidal cell region after kainic acid-induced<br />
status epilepticus in juvenile rats.<br />
PLoS One, 2010, 5,5: e10733<br />
Lauridsen JB, Johansen JL, Rekling JC, Thirstrup K, Moerk A and Sager TN<br />
Regulation of the Bcas1 and Baiap3 transcripts in the subthalamic nucleus in mice recovering<br />
from MPTP toxicity.<br />
Neurosci Res, 2011, 70,3: 269-276<br />
Lechner S, Müller-Ladner U, Renke B, Schölmerich J, Rüschoff J and Kullmann F<br />
Gene expression pattern of laser microdissected colonic crypts of adenomas with low grade<br />
dysplasia.<br />
Gut, 2003, 52: 1148-1153<br />
Lechner S, Müller-Ladner U, Neumann E, Dietmaier W, Welsh J, Schölmerich J, Rüschoff J and Kullmann F<br />
Use of simplified transcriptors for the analysis of gene expression profiles in lasermicrodissected<br />
cell populations.<br />
Lab Invest, 2001, 81: 1233-1242<br />
Lewis A, Segditsas S, Deheragoda M, Pollard P, Jeffery R, Nye E, Lockstone H, Davis H, Stamp G,<br />
Poulsom R, Wright N and Tomlinson I<br />
Severe polyposis in Apc (1322T) mice is associated with submaximal Wnt signalling and increased<br />
expression of the stem cell marker Lgr5.<br />
Gut, 2010, 59,12: 1680-1686<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Li S, Park H, Trempus CS, Gordon D, Liu Y, Cotsarelis G, Morris RJ.<br />
A keratin 15 containing stem cell population from the hair follicle contributes to squamous<br />
papilloma development in the mouse.<br />
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Locke JA, Guns ES, Lehman ML, Ettinger S, Zoubeidi A, Lubik A, Margiotti K, Fazli L, Adomat H, Wasan<br />
KM, Gleave ME and Nelson CC<br />
Arachidonic acid activation of intratumoral steroid synthesis during prostate cancer<br />
progression to castration resistance.<br />
Prostate, 2010, 70,3: 239-251<br />
Londhe KB, Borlak J.<br />
A Cross-Platform Comparison of Genome-Wide Expression Changes of Laser Microdissected<br />
Lung Tissue of C-Raf Transgenic Mice Using 3'IVT and Exon Array.<br />
PLoS One. 2012;7(7):e40778. PubMed<br />
Malusecka E, Fiszer-Kierzkowska A, Herik R, Wronski S, Rembak-Szynkiewicz J.<br />
Combining Laser-Assisted Microdissection with/and Immunohistochemistry – RNA Quality of<br />
Clinical LCM-Derived Samples.<br />
J Clinic Experiment Pathol. 2012, in press, doi: 10.4172/2161-0681.1000112<br />
Marotta D, Karar J, Jenkins WT, Kumanova M, Jenkins KW, Tobias JW, Baldwin D, Hatzigeorgiou A,<br />
Alexiou P, Evans SM, Alarcon R, Maity A, Koch C and Koumenis C<br />
In vivo profiling of hypoxic gene expression in gliomas using the hypoxia marker EF5 and<br />
laser-capture microdissection.<br />
Cancer Res, 2011, 71,3: 779-789<br />
Morrogh M, Andrade VP, Giri D, Sakr RA, Paik W, Qin LX, Arroyo CD, Brogi E, Morrow M and King TA<br />
Cadherin-catenin complex dissociation in lobular neoplasia of the breast.<br />
Breast Cancer Res Treat, 2011, in press<br />
Nakata K, Ohuchida K, Mizumoto K, Kayashima T, Ikenaga N, Sakai H, Lin C, Fujita H, Otsuka T, Aishima<br />
S, Nagai E, Oda Y and Tanaka M<br />
MicroRNA-10b is overexpressed in pancreatic cancer, promotes its invasiveness, and<br />
correlates with a poor prognosis.<br />
Surgery, 2011, 150,5: 916-922<br />
Nawaratna SS, McManus DP, Moertel , Gobert GN and Jones MK<br />
Gene atlasing of digestive and reproductive tissues in Schistosoma mansoni.<br />
PLoS Negl Trop Dis, 2011, in press<br />
Oeschger FM, Wang WZ, Lee S, García-Moreno F, Goffinet AM, Arbonés ML, Rakic S and Molnár Z<br />
Gene Expression Analysis of the Embryonic Subplate.<br />
Cereb Cortex, 2011, in press<br />
Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans M, Beck J, Buckner B,<br />
Janick-Buckner D, Nettleton D, Scanlon MJ and Schnable PS<br />
Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).<br />
Plant J, 2007, 52,3: 391-404<br />
Ohuchida K, Mizumoto K, Ishikawa N, Fujii K, Konomi H, Nagai E, Yamaguchi K, Tsuneyoshi M and<br />
Tanaka M<br />
The role of S100A6 in pancreatic cancer development and its clinical implication as a<br />
diagnostic marker and therapeutic target.<br />
Clin Cancer Res, 2005, 11,21: 7785-7793<br />
Otto C, Giefing M, Massow A, Vater I, Gesk S, Schlesner M, Richter J, Klapper W, Hansmann ML, Siebert<br />
R, Küppers R.<br />
Genetic lesions of the TRAF3 and MAP3K14 genes in classical Hodgkin lymphoma.<br />
Br J Haematol. 2012 Jun;157(6):702-8. doi: 10.1111/j.1365-2141.2012.09113.x. PubMed<br />
Peng T, Zhu J, Phasouk K, Koelle DM, Wald A, Corey L.<br />
An Effector Phenotype of CD8+ T Cells at the Junction Epithelium during Clinical Quiescence of<br />
Herpes Simplex Virus 2 Infection.<br />
J Virol. 2012 Oct;86(19):10587-96. PubMed<br />
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Laser Microdissection<br />
Perrin FE, Boisset G, Lathuilière A and Kato AC<br />
Cell death pathways differ in several mouse models with motoneurone disease: analysis of<br />
pure motoneurone populations at a presymptomatic age.<br />
J Neurochem, 2006, 98,6: 1959-1972<br />
Perrin FE, Boisset G, Docquier M, Schaad O, Descombes P and Kato AC<br />
No widespread induction of cell death genes occurs in pure motoneurons in an ALS mouse<br />
model.<br />
Hum Mol Genet, 2005, 14,21: 3309-3321<br />
Plummer S, Sharpe RM, Hallmark N, Mahood IK and Elcombe C<br />
Time-dependent and compartment-specific effects of in utero exposure to di(n-butyl)<br />
phthalate on gene/protein expression in the fetal rat testis as revealed by transcription<br />
profiling and laser capture microdissection.<br />
Toxicol Sci, 2007, 97,2: 520-532<br />
Pothuri B, Leitao MM, Levine DA, Viale A, Olshen AB, Arroyo C, Bogomolniy F, Olvera N, Lin O, Soslow<br />
RA, Robson ME, Offit K, Barakat RR and Boyd J<br />
Genetic analysis of the early natural history of epithelial ovarian carcinoma.<br />
PLoS One, 2010, e10358<br />
Purdie KJ, Harwood CA, Gibbon K, Chaplin T, Young BD, Cazier JB, Singh N, Leigh IM and Proby CM<br />
High-resolution genomic profiling of human papillomavirus-associated vulval neoplasia.<br />
Br J Cancer, 2010, 102,6: 1044-1051<br />
Rodrıguez-Gonzalez FG, Mustafa DA, Mostert B, Sieuwerts AM.<br />
The challenge of gene expression profiling in heterogeneous clinical samples.<br />
Methods. 2012 May 29. PubMed<br />
Roepman P, de Koning E, van Leenen D, de Weger RA, Kummer JA, Slootweg PJ and Holstege FC<br />
Dissection of a metastatic gene expression signature into distinct components.<br />
Genome Biol, 2006, 7,12: R117<br />
Roesch A, Vogt T, Stolz W, Dugas M, Landthaler M and Becker B<br />
Discrimination between gene expression patterns in the invasive margin and the tumour core<br />
of malignant melanomas.<br />
Melanoma Res, 2003, 13: 503-509<br />
Rohrbeck A and Borlak J<br />
Cancer genomics identifies regulatory gene networks associated with the transition from<br />
dysplasia to advanced lung adenocarcinomas induced by c-Raf-1.<br />
PLoS One, 2009, 4,10: e7315<br />
Rohrbeck A, Müller VS and Borlak J<br />
Molecular characterization of lung dysplasia induced by c-Raf-1.<br />
PLoS One, 2009, 4,5: e5637<br />
Roy S, Khanna S, Kuhn DE, Rink C, Williams WT, Zweier JL and Sen CK<br />
Transcriptome analysis of the ischemia-reperfused remodeling myocardium: temporal changes<br />
in inflammation and extracellular matrix.<br />
Physiol Genomics, 2006, 25,3: 364-374<br />
Saare M, Sõritsa D, Vaidla K, Palta P, Remm M, Laan M, Karro H, Sõritsa A, Salumets A, D'Hooghe T,<br />
Peters M.<br />
No evidence of somatic DNA copy number alterations in eutopic and ectopic endometrial tissue<br />
in endometriosis.<br />
Hum Reprod. 2012 Jun;27(6):1857-64. PubMed PMID: 22473391. PubMed<br />
Schain F, Tryselius Y, Sjöberg J, Porwit A, Backman L, Malec M, Xu D, Vockerodt M, Baumforth KR, Wei<br />
W, Murray PG, Björkholm M and Claesson HE<br />
Evidence for a pathophysiological role of cysteinyl leukotrienes in classical Hodgkin<br />
lymphoma.<br />
Int J Cancer, 2008, 123,10: 2285-2293<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Scheidl SJ, Nilsson S, Kalén M, Hellström M, Takemoto M, Håkansson J and Lindahl P<br />
mRNA expression profiling of laser microbeam microdissected cells from slender embryonic<br />
structures.<br />
Am J Pathol, 2002, 160,3: 801-813<br />
Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R and Rolletschek H<br />
A novel procedure for the quantitative analysis of metabolites, storage products and<br />
transcripts of laser microdissected seed tissues of Brassica napus.<br />
Plant Methods, 2011, in press<br />
Schlomm T, Luebke AM, Sultmann H, Hellwinkel OJ, Sauer U, Poustka A, David KA, Chun FK, Haese A,<br />
Graefen M, Erbersdobler A and Huland H<br />
Extraction and processing of high quality RNA from impalpable and macroscopically invisible<br />
prostate cancer for microarray gene expression analysis.<br />
Int J Oncol, 2005, 27,3: 713-720<br />
Schmitz R, Hansmann ML, Bohle V, Martin-Subero J, Hartmann S, Mechtersheimer G, Klapper W, Vater I,<br />
Giefing M, Gesk S, Stanelle J, Siebert R and Küppers R<br />
TNFAIP3 (A20) is a tumor suppressor gene in Hodgkin lymphoma and primary mediastinal B<br />
cell lymphoma.<br />
J Exp Med, 2009, 206,5: 981-989<br />
Schütze K, Becker B, Bernsen M, Björnsen T, Brocksch D, Bush C, Clement-Sengewald A, van Dijk MCRF,<br />
Friedemann G, Heckl W, Lahr G, Lindahl P, Mayer A, Nilsson S, Scheidl SJ, Stich M, Stolz W, Takemoto M,<br />
Thalhammer S, Vogt T and Burgemeister R<br />
Laser Pressure Catapulting.<br />
In DNA Microarrays (A molecular cloning manual), ed. Bowtell D and Sambrook J, CSHL Press New York,<br />
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Shaikhibrahim Z, Lindstrot A, Ellinger J, Rogenhofer S, Buettner R and Wernert N<br />
Genes differentially expressed in the peripheral zone compared to the transitional zone of the<br />
normal human prostate and their potential regulation by ETS factors.<br />
Mol Med Report, 2012, 5,1: 32-36<br />
Simonin Y, Perrin FE and Kato AC<br />
Axonal involvement in the Wlds neuroprotective effect: analysis of pure motoneurons in a<br />
mouse model protected from motor neuron disease at a pre-symptomatic age.<br />
J Neurochem, 2007, 101: 530-542<br />
Slavova N, Drescher A, Visekruna A, Dullat S, Kroesen AJ, Ritz JP and Buhr HJ<br />
NALP expression in Paneth cells provides a novel track in IBD signaling.<br />
Langenbecks Arch Surg, 2010, 395,4: 351-357<br />
Sodir NM, Swigart LB, Karnezis AN, Hanahan D, Evan GI and Soucek L<br />
Endogenous Myc maintains the tumor microenvironment.<br />
Genes Dev, 2011, 25,9: 907-916<br />
Sohn P, Cox M, Chen D and Serra R<br />
Molecular profiling of the developing mouse axial skeleton: A role for Tgfbr2 in the<br />
development of the intervertebral disc.<br />
BMC Dev Biol, 2010, 9:29<br />
Spee B, Carpino G, Schotanus BA, Katoonizadeh A, Vander Borght S, Gaudio E and Roskams T<br />
Characterisation of the activated liver progenitor cell niche, potential involvement of Wnt and<br />
Notch signalling.<br />
Gut, 2010, 59,2: 247-257<br />
Stemmer K and Dietrich DR<br />
Application of laser-capture microdissection to study renal carcinogenesis.<br />
Methods Mol Biol, 2011, 755: 279-290<br />
Stemmer K, Ellinger-Ziegelbauer H, Ahr HJ and Dietrich DR<br />
Molecular characterization of preneoplastic lesions provides insight on the development of<br />
renal tumors.<br />
Am J Pathol, 2009, 175,4: 1686-1698<br />
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<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Stewart L, Hindmarch CC, Qiu J, Tung YC, Yeo GS and Murphy D<br />
Hypothalamic transcriptome plasticity in two rodent species reveals divergent differential<br />
gene expression but conserved pathways.<br />
J Neuroendocrinol, 2011, 23,2: 177-185<br />
Stierum R, Burgemeister R, van Helvoort A, Peijnenburg A, Schütze K, Seidelin M, Vang O and van<br />
Ommen B<br />
Functional foods against colorectal cancer. An example project integrating functional<br />
genomics, nutrition and health.<br />
Nutr Metab Cardiovasc Dis, 2001, 11,4: 94-98<br />
Stybayeva G, Zhu H, Ramanculov E, Dandekar S, George M and Revzin A<br />
Micropatterned co-cultures of T-lymphocytes and epithelial cells as a model of mucosal<br />
immune system.<br />
Biochem Biophys Res Commun, 2009, 380,3: 575-580<br />
Tauris B, Borg S, Gregersen PL and Holm PB<br />
A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection<br />
and gene expression profiling.<br />
J Exp Bot, 2009, 60,4: 1333-1347<br />
Teramoto K, Negoro N, Kitamoto K, Iwai T, Iwao H, Okamura M and Miura K<br />
Microarray analysis of glomerular gene expression in murine lupus nephritis.<br />
J Pharmacol Sci, 2008, 106,1: 56-67<br />
Thelen P, Burfeind P, Grzmil M, Voigt S, Ringert RH and Hemmerlein B<br />
cDNA microarray analysis with amplified RNA after isolation of intact cellular RNA from<br />
neoplastic and non-neoplastic prostate tissue separated by laser microdissections.<br />
Int J Oncol, 2004, 24: 1085-1092<br />
Thiel J, Weier D, Sreenivasulu N, Strickert M, Weichert N, Melzer M, Czauderna T, Wobus U, Weber H and<br />
Weschke W<br />
Different hormonal regulation of cellular differentiation and function in nucellar projection and<br />
endosperm transfer cells: a microdissection-based transcriptome study of young barley grains.<br />
Plant Physiol, 2008, 148,3: 1436-1452<br />
Tian XF, Fan XG, Zhang Y, Huang Y, Dai H and Ying RS<br />
Procuration and identification of bacteria in paraffin-embedded liver tissues of hepatocellular<br />
carcinoma by laser-assisted microdissection technique.<br />
APMIS, 2008, 116,1: 10-15<br />
Tomioka I, Maeda T, Shimada H, Kawai K, Okada Y, Igarashi H, Oiwa R, Iwasaki T, Aoki M, Kimura T,<br />
Shiozawa S, Shinohara H, Suemizu H, Sasaki E and Okano H<br />
Generating induced pluripotent stem cells from common marmoset (Callithrix jacchus) fetal<br />
liver cells using defined factors, including Lin28.<br />
Genes Cells, 2010, 15,9: 959-969<br />
Tsubaki T, Arita N, Kawakami T, Shiratsuchi T, Yamamoto H, Takubo N, Yamada K, Nakata S, Yamamoto<br />
S and Nose M<br />
Characterization of histopathology and gene-expression profiles of synovitis in early<br />
rheumatoid arthritis using targeted biopsy specimens.<br />
Arthritis Res, 2005, 7,4: R825-836<br />
Tung YC, Ma M, Piper S, Coll A, O'Rahilly S and Yeo GS<br />
Novel leptin-regulated genes revealed by transcriptional profiling of the hypothalamic<br />
paraventricular nucleus.<br />
J Neurosci, 2008, 28,47: 12419-12426<br />
Vandewoestyne M, Kumps C, Swerts K, Menten B, Lammens T, Philippé J, De Preter K, Laureys G, Van<br />
Roy N, Speleman F and Deforce D<br />
Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment<br />
risk assessment by array comparative genomic hybridization.<br />
Int J Cancer, 2011, in press<br />
October 2012 92/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Volger OL, Fledderus JO, Kisters N, Fontijn RD, Moerland PD, Kuiper J, van Berkel TJ, Bijnens AP, Daemen<br />
MJ, Pannekoek H and Horrevoets AJ<br />
Distinctive expression of chemokines and transforming growth factor-ß signaling in human<br />
arterial endothelium during atherosclerosis.<br />
Am J Pathol, 2007, 171,1: 326-337<br />
Voo SS, Grimes HD, Lange BM.<br />
Cell type-specific transcriptome analysis of the soybean leaf paraveinal mesophyll layer.<br />
Plant Mol Biol Rep. 2012, DOI 10.1007/s11105-012-0494-7<br />
Walch A, Komminoth P, Hutzler P, Aubele M, Höfler H and Werner M<br />
Microdissection of tissue sections: Application to the molecular genetic characterization of<br />
premalignant lesions.<br />
Pathobiology, 2000, 68: 9-17<br />
Waldmann J, Fendrich V, Holler J, Buchholz M, Heinmöller E, Langer P, Ramaswamy A, Samans B, Walz<br />
MK, Rothmund M, Bartsch DK and Slater EP<br />
Microarray analysis reveals differential expression of benign and malignant pheochromocytoma.<br />
Endocr Relat Cancer, 2010, 17,3: 743-756<br />
Westbury CB, Reis-Filho JS, Dexter T, Mahler-Araujo B, Fenwick K, Iravani M, Grigoriadis A, Parry S,<br />
Robertson D, Mackay A, Ashworth A, Yarnold JR and Isacke CM<br />
Genome-wide transcriptomic profiling of microdissected human breast tissue reveals<br />
differential expression of KIT (c-Kit, CD117) and oestrogen receptor-α (ERα) in response to<br />
therapeutic radiation.<br />
J Pathol, 2009, 219,1: 131-140<br />
Wild PJ, Herr A, Wissmann C, Stoehr R, Rosenthal A, Zaak D, Simon R, Knuechel R, Pilarsky C and<br />
Hartmann A<br />
Gene expression profiling of progressive papillary noninvasive carcinomas of the urinary<br />
bladder.<br />
Clin Cancer Res, 2005, 11,12: 4415-4429<br />
Xiao Y, Karnati S, Qian G, Nenicu A, Fan W, Tchatalbachev S, Höland A, Hossain H, Guillou F, Lüers GH,<br />
Baumgart-Vogt E.<br />
Cre-mediated stress affects sirtuin expression levels, peroxisome biogenesis and metabolism,<br />
antioxidant and proinflammatory signaling pathways.<br />
PLoS One. 2012;7(7):e41097. PubMed<br />
Xie Y, Xiao G, Coombes KR, Behrens C, Solis LM, Raso G, Girard L, Erickson HS, Roth J, Heymach JV,<br />
Moran C, Danenberg K, Minna JD and Wistuba II<br />
Robust gene expression signature from formalin-fixed paraffin-embedded samples predicts<br />
prognosis of non-small-cell lung cancer patients.<br />
Clin Cancer Res, 2011, 17,17: 5705-5714<br />
Yanaihara A, Otsuka Y, Iwasaki S, Koide K, Aida T and Okai T<br />
Comparison in gene expression of secretory human endometrium using lasermicrodissection.<br />
Reprod Biol Endocrinol, 2004, 2,1: 66<br />
Yu J, Li A, Hong SM, Hruban RH and Goggins M<br />
MicroRNA alterations of pancreatic intraepithelial neoplasms (PanINs).<br />
Clin Cancer Res, 2011, in press<br />
Zhang X, Douglas RN, Strable J, Lee M, Buckner B, Janick-Buckner D, Schnable PS, Timmermans MC,<br />
Scanlon M.<br />
PUNCTATE VASCULAR EXPRESSION1 (PVE1) is a novel maize gene required for leaf pattern<br />
formation that functions downstream of the ta-siARF pathway.<br />
Plant Physiol. 2012 PubMed PMID: 22669891. PubMed<br />
Zhang X, Madi S, Borsuk L, Nettleton D, Elshire RJ, Buckner B, Janick-Buckner D, Beck J, Timmermans M,<br />
Schnable PS and Scanlon MJ<br />
Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the<br />
shoot apical meristem.<br />
PLoS Genet, 2007, 3,6: e101<br />
October 2012 93/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Zhou W, Muggerud A, Vu P, Due EU, Sørlie T, Børresen-Dale AL, Wärnberg F and Langerød A<br />
Full sequencing of TP53 identifies identical mutations within in situ and invasive components<br />
in breast cancer suggesting clonal evolution.<br />
Mol Oncol, 2009, 3: 214-219<br />
Zhou M, Li XM and Lavker RM<br />
Transcriptional profiling of enriched populations of stem cells versus transient amplifying<br />
cells: a comparison of limbal and corneal epithelial basal cells.<br />
J Biol Chem, 2006, 281,28: 19600-19609<br />
Ziegler L, Segal-Ruder Y, Coppola G, Reis A, Geschwind D, Fainzilber M and Goldstein RS<br />
A human neuron injury model for molecular studies of axonal regeneration.<br />
Exp Neurol, 2010, 223,1: 119-127<br />
1.3 Proteomics<br />
Asomugha CO, Gupta R and Srivastava OP<br />
Identification of crystallin modifications in the human lens cortex and nucleus using laser<br />
capture microdissection and CyDye labeling.<br />
Mol Vis, 2010, 16: 476-494<br />
Bedford L, Hay D, Devoy A, Paine S, Powe DG, Seth R, Gray T, Topham I, Fone K, Rezvani N, Mee M,<br />
Soane T, Layfield R, Sheppard PW, Ebendal T, Usoskin D, Lowe J and Mayer RJ<br />
Depletion of 26S proteasomes in mouse brain neurons causes neurodegeneration and Lewy-<br />
like inclusions resembling human pale bodies.<br />
J Neurosci, 2008, 28,33: 8189-8198<br />
Boltze C, Schneider-Stock R, Quednow C, Hinze R, Mawrin C, Hribaschek A, Roessner A and Hoang-Vu C<br />
Silencing of the maspin gene by promoter hypermethylation in thyroid cancer.<br />
Int J Mol Med, 2003, 12: 479-484<br />
Braakman RB, Tilanus-Linthorst MM, Liu NQ, Stingl C, Dekker LJ, Luider TM, Martens JW, Foekens JA,<br />
Umar A.<br />
Optimized nLC-MS workflow for laser capture microdissected breast cancer tissue.<br />
J Proteomics. 2012 Jan 24. [Epub ahead of print]. PubMed<br />
Braakman RB, Luider TM, Martens JW, Foekens JA and Umar A<br />
Laser capture microdissection applications in breast cancer proteomics.<br />
Methods Mol Biol, 2011, 755: 143-154<br />
Burnet PWJ, Eastwood SL and Harrison PJ<br />
Laser-assisted microdissection: Methods for the molecular analysis of psychiatric disorders at<br />
a cellular resolution.<br />
Biol Psychiatry, 2004, 55: 107-111<br />
Careri M, Mangia A.<br />
Trends in analytical atomic and molecular mass spectrometry in biology and the life sciences.<br />
Anal Bioanal Chem. 2011 Mar;399(8):2585-95. PubMed<br />
Cooper J<br />
Laser Microdissection for research into the molecular neuropathology of Batten disease.<br />
Microsc Anal, 2006, 20,5: 11-12<br />
De la Cuesta F, Alvarez-Llamas G, Maroto AS, Donado A, Zubiri I, Posada M, Padial LR, Pinto AG,<br />
Barderas MG and Vivanco F<br />
A proteomic focus on the alterations occurring at the atherosclerotic coronary intima.<br />
Mol Cell Proteomics, 2011, in press<br />
Dietrich DR, Heussner AH, O'Brien E, Gramatté T, Runkel M, Rumpf S and Day BW<br />
Propiverine-induced accumulation of nuclear and cytosolic protein in F344 rat kidneys:<br />
isolation and identification of the accumulating protein.<br />
Toxicol Appl Pharmacol, 2008, 233,3: 411-419<br />
October 2012 94/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Doppler K, Lindner A, Schütz W, Schütz M and Bornemann A<br />
Gain and loss of extracellular molecules in sporadic inclusion body myositis and polymyositis-<br />
a proteomics-based study.<br />
Brain Pathol, 2011, in press<br />
Dos Santos A, Court M, Thiers V, Sar S, Guettier C, Samuel D, Bréchot C, Garin J, Demaugre F and<br />
Masselon CD<br />
Identification of cellular targets in human intrahepatic cholangiocarcinoma using laser<br />
microdissection and AMT-tag proteomics.<br />
Mol Cell Proteomics, 2010, 9,9: 1991-2004<br />
von Eggeling F, Melle C and Ernst G<br />
Microdissecting the proteome.<br />
Proteomics, 2007, 7,16: 2729-2737<br />
von Eggeling F, Melle C and Ernst G<br />
Biomarker discovery by tissue microdissection and ProteinChip array analysis.<br />
J Lab Med, 2003, 27,3/4: 79-84<br />
Ekegren T, Hanrieder J, Aquilonius SM and Bergquist J<br />
Focused proteomics in post-mortem human spinal cord.<br />
J Proteome Res, 2006, 5,9: 2364-2371<br />
Ernst G, Melle C, Schimmel B, Bleul A and v Eggeling F<br />
Proteohistography - direct analysis of tissue with high sensitivity and high spatial resolution<br />
using ProteinChip technology.<br />
J Histochem Cytochem, 2006, 54: 13-17<br />
Escher N, Ernst G, Melle C, Berndt A, Clement JH, Junker K, Friedrich K, Guntinas-Lichius O and von<br />
Eggeling F<br />
Comparative proteomic analysis of normal and tumor stromal cells by tissue on chip based<br />
mass spectrometry (toc-MS).<br />
Diagn Pathol, 2010, 28,5: 10<br />
Evans EA, Zhang H and Martin-DeLeon PA<br />
SPAMI SPAMI (PH-20) protein and mRNA expression in the epididymides of humans and<br />
macaques: Utilizing laser microdissection/RT-PCR.<br />
Reprod Biol Endocrinol, 2003, 1: 1-12<br />
Ferri N, Carragher NO and Raines EW<br />
Role of discoidin domain receptors 1 and 2 in human smooth muscle cell-mediated collagen<br />
remodeling.<br />
Am J Pathol, 2004, 164,5: 1575-1585<br />
de Groot CJ, Steegers-Theunissen RP, Guzel C, Steegers EA and Luider TM<br />
Peptide patterns of laser dissected human trophoblasts analyzed by matrix-assisted laser<br />
desorption/ionisation-time of flight mass spectrometry.<br />
Proteomics, 2005,5: 597-607<br />
Guzel C, Ursem N, Dekker L, Derkx P, Joore J, van Dijk E, Ligtvoet G, Steegers E and Luider T<br />
Multiple reaction monitoring assay for pre-eclampsia related calcyclin peptides in formalin<br />
fixed paraffin embedded placenta.<br />
J Prot Res, 2011, in press<br />
Hashimoto M, Bogdanovic N, Volkmann I, Aoki M, Winblad B and Tjernberg LO<br />
Analysis of microdissected human neurons by a sensitive ELISA reveals a correlation between<br />
elevated intracellular concentrations of Aß42 and Alzheimer's disease neuropathology.<br />
Acta Neuropathol, 2010, 119,5: 543-554<br />
Heel K and Dawkins H<br />
Laser microdissection and optical tweezers in research.<br />
Today’s Life Science, 2001, 13,2: 42-48<br />
Jones MK, Higgins T, Stenzel DJ and Gobert GN<br />
Towards tissue specific transcriptomics and expression pattern analysis in schistosomes using<br />
laser microdissection microscopy.<br />
Exp Parasitol, 2007, 117,3: 259-266<br />
October 2012 95/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kakehashi A, Inoue M, Wei M, Fukushima S and Wanibuchi H<br />
Cytokeratin 8/18 overexpression and complex formation as an indicator of GST-P positive foci<br />
transformation into hepatocellular carcinomas.<br />
Toxicol Appl Pharmacol, 2009, 238,1: 71-79<br />
Kaspar S, Weier D, Weschke W, Mock HP, Matros A.<br />
Protein analysis of laser capture micro-dissected tissues revealed cell-type specific biological<br />
functions in developing barley grains.<br />
Anal Bioanal Chem. 2010 Dec;398(7-8):2883-93. PubMed<br />
Kaspar S, Peukert M, Svatos A, Matros A and Mock HP<br />
MALDI-imaging mass spectrometry - An emerging technique in plant biology.<br />
Proteomics, 2011, 11,9: 1840-1850<br />
Kehr J<br />
Single cell technology.<br />
Curr Opin Plant Biol, 2003, 6,6: 617-621<br />
Kubo N, Akita N, Shimizu A, Kitahara H, Parker AL and Miyagawa S<br />
Identification of oligopeptide binding to colon cancer cells separated from patients using laser<br />
capture microdissection.<br />
J Drug Target, 2008, 16,5: 396-404<br />
Kwapiszewska G, Meyer M, Bogumil R, Bohle RM, Seeger W, Weissmann N and Fink L<br />
Identification of proteins in laser-microdissected small cell numbers by SELDI-TOF and<br />
Tandem MS.<br />
BMC Biotechnol, 2004, 4: 30<br />
Lassen S, Wiebring A, Helmholz H, Ruhnau C, Prange A.<br />
Isolation of a Nav channel blocking polypeptide from Cyanea capillata medusae - a neurotoxin<br />
contained in fishing tentacle isorhizas.<br />
Toxicon. 2012 May;59(6):610-6. PubMed PMID: 22402177. PubMed<br />
Leverenz JB, Umar I, Wang Q, Montine TJ, McMillan PJ, Tsuang DW, Jin J, Pan C, Shin J, Zhu D and<br />
Zhang J<br />
Proteomic identification of novel proteins in cortical Lewy Bodies.<br />
Brain Pathol, 2007, 17,2: 139-145<br />
Maitre M, Roullot-Lacarrière V, Piazza PV and Revest JM<br />
Western blot detection of brain phosphoproteins after performing Laser Microdissection and<br />
Pressure Catapulting (LMPC).<br />
J Neurosci Methods, 2011, 198,2: 204-212<br />
Maxwell GL, Hood BL, Day R, Chandran U, Kirchner D, Kolli VS, Bateman NW, Allard J, Miller C, Sun M,<br />
Flint MS, Zahn C, Oliver J, Banerjee S, Litzi T, Parwani A, Sandburg G, Rose S, Becich MJ, Berchuck A,<br />
Kohn E, Risinger JI and Conrads TP<br />
Proteomic analysis of stage I endometrial cancer tissue: Identification of proteins associated<br />
with oxidative processes and inflammation.<br />
Gynecol Oncol, 2011, 121,3: 586-594<br />
Melle C, Ernst G, Winkler R, Schimmel B, Klussmann JP, Wittekindt C, Guntinas-Lichius O and von<br />
Eggeling F<br />
Proteomic analysis of human papillomavirus-related oral squamous cell carcinoma:<br />
identification of thioredoxin and epidermal-fatty acid binding protein as upregulated protein<br />
markers in microdissected tumor tissue.<br />
Proteomics, 2009, 9,8: 2193-2201<br />
Melle C, Ernst G, Schimmel B, Bleul A and von Eggeling F<br />
Colon-derived liver metastasis, colorectal carcinoma, and hepatocellular carcinoma can be<br />
discriminated by the Ca(2+)-binding proteins S100A6 and S100A11.<br />
PLoS ONE, 2008, 3,12: e3767<br />
Melle C, Kaufmann R, Hommann M, Bleul A, Driesch D, Ernst G and v Eggeling F<br />
Proteomic profiling in microdissected hepatocellular carcinoma tissue using ProteinChip<br />
technology.<br />
Int J Oncol, 2004, 24: 885-891<br />
October 2012 96/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Melle C, Ernst G, Schimmel B, Bleul A, Koscielny S, Wiesner A, Bogumil R, Möller U, Osterloh D,<br />
Halbhuber KJ and v Eggeling F<br />
A technical triade for proteomic identification and characterization of cancer biomarkers.<br />
Cancer Res, 2004, 64: 4099-4104<br />
Melle C, Ernst G, Schimmel B, Bleul A, Koscielny S, Wiesner A, Bogumil R, Moller U, Osterloh D,<br />
Halbhuber KJ and von Eggeling F<br />
Biomarker discovery and identification in laser microdissected head and neck squamous cell<br />
carcinoma with ProteinChip� technology, two-dimensional gel electrophoresis, tandem mass<br />
spectrometry and immunohistochemistry.<br />
Mol Cell Proteomics, 2003, 27: 443-452<br />
Micke P, Bjornsen T, Scheidl S, Strömberg S, Demoulin JB, Ponten F, Östman A, Lindahl P and Busch C<br />
A fluid cover medium provides superior morphology and preserves RNA integrity in tissue<br />
sections for laser microdissection and pressure catapulting.<br />
J Pathol, 2004; 202: 130-138<br />
Miller-Delaney SF, Das S, Sano T, Jimenez-Mateos EM, Bryan K, Buckley PG, Stallings RL, Henshall DC.<br />
Differential DNA methylation patterns define status epilepticus and epileptic tolerance.<br />
J Neurosci. 2012 Feb 1;32(5):1577-88. PubMed PMID: 22302800. PubMed<br />
Müller U, Ernst G, Melle C, Guthke R and von Eggeling F<br />
Convergence of the proteomic pattern in cancer.<br />
Bioinformatics, 2006, 22,11: 1293-1296<br />
Mustafa DA, Dekker LJ, Stingl C, Kremer A, Stoop M, Sillevis Smitt PA, Kros JM, Luider TM.<br />
A proteome comparison between physiological angiogenesis and angiogenesis in glioblastoma.<br />
Mol Cell Proteomics. 2012 Jun;11(6):M111.008466. PubMed<br />
Mustafa DA, Dekker LJ, Stingl C, Kremer A, Stoop M, Sillevis Smitt PA, Kros JM, Luider TM.<br />
A proteome comparison between physiological angiogenesis and angiogenesis in glioblastoma.<br />
Mol Cell Proteomics. 2012 Jan 25. PubMed<br />
Mustafa DA, Burgers PC, Dekker LJ, Charif H, Titulaer M, Sillevis Smitt PA, Luider TM and Kros JM<br />
Identification of glioma neovascularisation-related proteins by using MALDI-FTMS and nano-<br />
LC fractionation to microdissected tumor vessels.<br />
Mol Cell Proteomics, 2007, 6,7: 1147-1157<br />
Naidoo K, Jones R, Dmitrovic B, Wijesuriya N, Kocher H, Hart IR and Crnogorac-Jurcevic T<br />
Proteome of formalin-fixed paraffin-embedded pancreatic ductal adenocarcinoma and lymph<br />
node metastases.<br />
J Pathol, 2011, in press<br />
Niyaz Y, Stich M, Sägmüller B, Burgemeister R, Friedemann G, Sauer U, Gangnus R and Schütze K<br />
Noncontact Laser Microdissection and Pressure Catapulting: Sample preparation for genomic,<br />
transcriptomic and proteomic analysis.<br />
Microarrays in Clinical Diagnostics in Methods in Molecular Medicine, 2005, 114: 1-24 (ed. Joos T and<br />
Fortina P)<br />
Niyaz Y and Schütze K<br />
Noncontact Laser Microdissection and Pressure Catapulting: A basic tool in genomics,<br />
transcriptomics and proteomics.<br />
Handbook of Immunohistochemistry and In Situ Hybridization of Human Carcinomas, 2005, 3: 55-63 (ed.<br />
Hayat M)<br />
Niyaz Y and Lahr G<br />
Non-contact Laser Microdissection and Catapulting.<br />
Business briefings, Future Drug Discovery, 2004: 93-98<br />
de Oliveira GP, Maximino JR, Lin CJ and Chadi G<br />
A method to immunolabel rodent spinal cord neurons and glia for molecular study in specific<br />
laser microdissected cells involved in neurodegenerative disorders.<br />
J Mol Histol, 2009, 40,3: 217-225<br />
October 2012 97/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Ostasiewicz P, Zielinska DF, Mann M and Wi niewski JR<br />
Proteome, phosphoproteome, and N-Glycoproteome are quantitatively preserved in<br />
formalin-fixed paraffin-embedded tissue and analyzable by High-Resolution Mass<br />
Spectrometry.<br />
J Proteome Res, 2010, 9,7: 3688-3700<br />
Panchal M, Loeper J, Cossec JC, Perruchini C, Lazar A, Pompon D and Duyckaerts C<br />
Enrichment of cholesterol in microdissected Alzheimer disease senile plaques as assessed by<br />
mass spectrometry.<br />
J Lipid Res, 2010, 51,3: 598-605<br />
Petzold A, Tisdall MM, Girbes AR, Martinian L, Thom M, Kitchen N and Smith M<br />
In vivo monitoring of neuronal loss in traumatic brain injury: a microdialysis study.<br />
Brain, 2011, 134: 464-483<br />
Peukert M, Matros A, Lattanzio G, Kaspar S, Abadía J and Mock HP<br />
Spatially resolved analysis of small molecules by matrix-assisted laser desorption/ionization<br />
mass spectrometric imaging (MALDI-MSI).<br />
New Phytol, 2011, in press, doi: 10.1111/j.1469-8137.2011.03970.x<br />
Philipson O, Lord A, Lalowski M, Soliymani R, Baumann M, Thyberg J, Bogdanovic N, Olofsson T,<br />
Tjernberg LO, Ingelsson M, Lannfelt L, Kalimo H, Nilsson LN.<br />
The Arctic amyloid-β precursor protein (AβPP) mutation results in distinct plaques and<br />
accumulation of N- and C-truncated Aβ.<br />
Neurobiol Aging. 2012 May;33(5):1010.e1-1010.e13. PubMed<br />
Pilchowski R, Stöhr R, von Eggeling F, Hartmann A, Wunderlich H and Junker K<br />
Specific protein patterns characterize metastatic potential of advanced bladder cancer.<br />
J Urol, 2011, in press<br />
Pinzani P, Lind K, Malentacchi F, Nesi G, Salvianti F, Villari D, Kubista M, Pazzagli M and Orlando C<br />
Prostate-specific antigen mRNA and protein levels in laser microdissected cells of human<br />
prostate measured by real-time reverse transcriptase-quantitative polymerase chain reaction<br />
and immuno-quantitative polymerase chain reaction.<br />
Hum Pathol, 2008, 39,10: 1474-1482<br />
Poznanovic S, Wozny W, Schwall GP, Sastri C, Hunzinger C, Stegmann W, Schrattenholz A, Buchner A,<br />
Gangnus R, Burgemeister R and Cahill MA<br />
Differential radioactive proteomic analysis of microdissected renal cell carcinoma tissue by 54<br />
cm isoelectric focusing in serial immobilized pH gradient gels.<br />
J Proteome Res, 2005, 4,6: 2117-2125<br />
Qazi AM, Aggarwal S, Steffer CS, Bouwman DL, Weaver DW, Gruber SA and Batchu RB<br />
Laser capture microdissection of pancreatic ductal adenocarcinoma cells to analyze EzH2 by<br />
Western Blot analysis.<br />
Methods Mol Biol, 2011, 755: 245-256<br />
Rahimi F, Shepherd CE, Halliday GM, Geczy CL and Raftery MJ<br />
Antigen-epitope retrieval to facilitate proteomic analysis of formalin-fixed archival brain<br />
tissue.<br />
Anal Chem, 2006, 78: 7216-7221<br />
Rosell A, Cuadrado E, Ortega-Aznar A, Hernández-Guillamon M, Lo EH and Montaner J<br />
MMP-9-positive neutrophil infiltration is associated to blood-brain barrier breakdown and<br />
basal lamina type IV collagen degradation during hemorrhagic transformation after human<br />
ischemic stroke.<br />
Stroke, 2008, 39,4: 1121-1126<br />
Rubie C, Frick VO, Wagner M, Rau B, Weber C, Kruse B, Kempf K, Tilton B, König J and Schilling M<br />
Enhanced expression and clinical significance of CC-chemokine MIPcarcinoma.<br />
Scand J Immunol, 2006, 63: 468-477<br />
Rullman E, Norrbom J, Strömberg A, Wågsäter D, Rundqvist H, Haas T and Gustafsson T<br />
Endurance exercise activates matrix metalloproteinases in human skeletal muscle.<br />
Appl Physiol, 2009, 106,3: 804-812<br />
October 2012 98/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Sägmüller B, Niyaz Y and Schütze K<br />
Laser-Mikrodissektion zur Gewinnung reiner Proben für die funktionelle Protein-Analyse.<br />
Biospektrum, 2004, 10: 574-575<br />
Satkauskas S and Bagnard D<br />
Local protein synethsis in axonal growth cones. What is next?<br />
Cell Adhesion Migration, 2007, 4: 179-184<br />
Sauber C, Sägmüller B, Neumann M and Kretschmar HA<br />
Identification of proteins in post-mortem human brain tissue by Laser Microdissection/<br />
Pressure Catapult and nano-LC/MS/MS.<br />
Agilent, 2004, Application Note 5989-0895EN<br />
Schad M, Lipton MS, Giavalisco P, Smith RD and Kehr J<br />
Evaluation of two-dimensional electrophoresis and liquid chromatography-tandem mass<br />
spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.<br />
Electrophoresis, 2005, 26,14: 2729-2738<br />
Schessl J, Zou Y, McGrath MJ, Cowling BS, Maiti B, Chin SS, Sewry C, Battini R, Hu Y, Cottle DL,<br />
Rosenblatt M, Spruce L, Ganguly A, Kirschner J, Judkins AR, Golden JA, Goebel HH, Muntoni F, Flanigan<br />
KM, Mitchell CA and Bönnemann CG<br />
Proteomic identification of FHL1 as the protein mutated in human reducing body myopathy.<br />
J Clin Invest, 2008, 118,3: 904-912<br />
Schütze K, Buchstaller A, Niyaz Y, Melle C, Ernst G, David K, Schlomm T and von Eggeling F<br />
Sample preparation by laser microdissection and catapulting for proteome analysis.<br />
WILEY-VCH Verlag, Weinheim, 2008, Chapter:6.3, 219-234, ISBN-13: 978-3-527-31796-7<br />
Shiotani M, Nakano K, Yamauchi E, Oda Y, Hosokawa S and Aoki T<br />
Proteomic analysis for neuronal vacuolation induced by MK-801 in rat retrosplenial cortex.<br />
J Toxicol Sci, 2011, 36,1: 131-133<br />
Söderberg L, Bogdanovic N, Axelsson B, Winblad B, Näslund J and Tjernberg LO<br />
Analysis of single Alzheimer solid plaque cores by laser capture microscopy and<br />
nanoelectrospray/tandem mass spectrometry.<br />
Biochemistry, 2006, 45: 9849-9856<br />
Steinmetz OM, Sadaghiani S, Panzer U, Krebs C, Meyer-Schwesinger C, Streichert T, Fehr S, Hamming I,<br />
van Goor H, Stahl RAK and Wenzel U<br />
Antihypertensive therapy induces compartment specific chemokine expression and a Th1<br />
immune response in the clipped kidney of Goldblatt hypertensive rats.<br />
Am J Physiol Renal Physiol, 2007, 292,2: F876-887<br />
Stephenson DT, Li Q, Simmons C, Connell MA, Meglasson MD, Merchant K and Emborg ME<br />
Expression of GAD65 and GAD67 immunoreactivity in MPTP-treated monkeys with or without<br />
L-DOPA administration.<br />
Neurobiol Dis, 2005, 20,2: 347-59<br />
Stierum R, Burgemeister R, van Helvoort A, Peijnenburg A, Schütze K, Seidelin M, Vang O and van<br />
Ommen B<br />
Functional foods against colorectal cancer. An example project integrating functional<br />
genomics, nutrition and health.<br />
Nutr Metab Cardiovasc Dis, 2001, 11,4: 94-98<br />
Stingl C, van Vilsteren FG, Guzel C, Ten Kate FJ, Visser M, Krishnadath KK, Bergman JJ and Luider TM<br />
Reproducibility of protein identification of selected cell types in Barrett's esophagus analyzed<br />
by combining laser-capture microdissection and mass spectrometry.<br />
J Proteome Res, 2011, 10,1: 288-298<br />
Tannapfel A, Anhalt K, Häusermann P, Sommerer F, Benicke M, Uhlmann D, Witzigmann H, Hauss J and<br />
Wittekind C<br />
Identification of novel proteins associated with hepatocellular carcinomas using protein microarrays.<br />
J Pathol, 2003, 201: 238-249<br />
October 2012 99/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />
Laser microtools in cell biology and molecular medicine.<br />
Laser Physics, 2003, 13: 681-691<br />
Thiel J, Müller M, Weschke W and Weber H<br />
Amino acid metabolism at the maternal-filial boundary of young barley seeds: a microdissection-based<br />
study.<br />
Umar A, Kang H, Timmermans AM, Look MP, Meijer-van Gelder ME, den Bakker Planta, 2009, 230,1:<br />
205-213<br />
Thiel J, Riewe D, Rutten T, Melzer M, Friedel S, Bollenbeck F, Weschke W, Weber H.<br />
Differentiation of endosperm transfer cells of barley: a comprehensive analysis at the microscale.<br />
Plant J. 2012 Apr 9. doi: 10.1111/j.1365-313X.2012.05018.x. PubMed<br />
Umar A, Luider TM, Foekens JA and Pasa-Tolic LMA, Jaitly N, Martens JW, Luider TM, Foekens JA and<br />
Pasa-Tolić L<br />
Identification of a putative protein profile associated with tamoxifen therapy resistance in<br />
breast cancer.<br />
Mol Cell Proteomics, 2009, 8,6: 1278-1294<br />
Umar A, Luider TM, Foekens JA and Pasa-Tolic L<br />
NanoLC-FT-ICR MS improves proteome coverage attainable for approximately 3000 lasermicrodissected<br />
breast carcinoma cells.<br />
Proteomics. 2007, 7,2: 323-329<br />
Waanders LF, Chwalek K, Monetti M, Kumar C, Lammert E and Mann M<br />
Quantitative proteomic analysis of single pancreatic islets.<br />
PNAS, 2009, 106,45: 18902-18907<br />
Walch A, Komminoth P, Hutzler P, Aubele M, Höfler H and Werner M<br />
Microdissection of tissue sections: Application to the molecular genetic characterization of<br />
premalignant lesions.<br />
Pathobiology, 2000, 68: 9-17<br />
Wang Q, Woltjer RL, Cimino PJ, Pan C, Montine KS. Zhang J and Montine TJ<br />
Proteomic analysis of neurofibrillary tangles in Alzheimer disease identifies GAPDH as a<br />
detergent-insoluble paired helical filament tau binding protein.<br />
FASEB, 2005, 19,7: 869-871<br />
Wehder L, Ernst G, Crecelius A, Guntinas-Lichius O, Melle C, Schubert U and von Eggeling F<br />
Depicting the spatial distribution of proteins in human tumor tissue combining SELDI, MALDI<br />
imaging and immunohistochemistry.<br />
J Histochem Cytochem, 2010, 58,10: 929-937<br />
Wellmann A, Wollscheid V, Lu H, Ma ZL, Albers P, Schütze K, Rhode V, Behrens P, Dreschers S, Ko Y and<br />
Wernert N<br />
Analysis of microdissected prostate tissue with ProteinChip arrays – a way to new insights<br />
into carcinogenesis and to diagnostic tools.<br />
Int J Mol Med, 2002, 9: 341-347<br />
Wellmann A, Rohde V, Rosenwald, A and Augustin AJ<br />
Von Lasern und Chips.<br />
Ophthalmologe, 2001, 98: 1138-1144<br />
Wernert N<br />
Lasermikrodissektion in der molekularen Onkologie des Prostatakarzinoms.<br />
Der Urologe, 2004, 43,6: 646-652<br />
Westphal G, Burgemeister R, Friedemann G, Wellmann A, Wernert N, Wollscheid V, Becker B, Vogt T,<br />
Knüchel R, Stolz W and Schütze K<br />
Noncontact Laser Catapulting: A basic procedure for functional genomics and proteomics.<br />
Conn M (ed): Laser capture microscopy and microdissection, Methods in Enzymology, 2002, 356,<br />
Chapter 8: 80-99<br />
October 2012 100/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Wi niewski JR, Ostasiewicz P and Mann M<br />
High recovery FASP applied to the proteomic analysis of microdissected formalin fixed paraffin<br />
embedded cancer tissues retrieves known colon cancer markers.<br />
J Proteome Res. 2011, 10,7: 3040-3049<br />
Zhang Y, Ye Y, Shen D, Jiang K, Zhang H, Sun W, Zhang J, Xu F, Cui Z and Wang S<br />
Identification of transgelin-2 as a biomarker of colorectal cancer by laser capture<br />
microdissection and quantitative proteome analysis.<br />
Cancer Sci, 2010, 101,2: 523-529<br />
1.4 Live Cell Handling<br />
Von Bally G, Kemper B, <strong>Carl</strong> D, Knoche S, Kempe M, Dietrich C, Stutz M, Wolleschenksky R, Schütze K,<br />
Stich M, Buchstaller A, Irion K, Beuthan J, Gersonde I and Schnekenburger J<br />
New Methods for marker-free live cell and tumour analysis (Mikroso).<br />
In: Popp J, Strehle M (eds.): Biophotonics. Visions for a better Health Care. Wiley. 2006: 301-360<br />
Bekker-Jensen S, Lukas C, Melander F, Bartek J and Lukas J<br />
Dynamic assembly and sustained retention of 53BP1 at the sites of DNA damage are controlled<br />
by Mdc1/NFBD1.<br />
J Cell Biol, 2005, 170,2: 201-211<br />
Bowen C and Gelmann EP<br />
NKX3.1 activates cellular response to DNA damage.<br />
Cancer Res, 2010, 70,8: 3089-3097<br />
Brierley SM, Castro J, Harrington AM, Hughes PA, Page AJ, Rychkov GY and Blackshaw LA<br />
TRPA1 contributes to specific mechanically activated currents and sensory neuron mechanical<br />
hypersensitivity.<br />
J Physiol, 2011, 589: 3575-3593<br />
Burgemeister R, Hitzler H, Hoyer C and Ankerhold R<br />
Noncontact laser microdissection: a new dimension in life science.<br />
Nature Methodes, 2006, Application Notes<br />
Burgemeister R<br />
New aspects of laser microdissection in research and routine.<br />
J Histochem Cytochem, 2005, 53,3: 409-412<br />
Burgemeister R and Stich M<br />
Laser mediated live cell handling: Detection, selection and collection of single live cells by<br />
Laser Microdissection and Pressure Catapulting (LMPC).<br />
Zellbiologie aktuell, 2004, 30. Jahrgang, Ausgabe 1: 23-24<br />
Chaudhary KW, Barrezueta NX, Bauchmann MB, Milici AJ, Beckius G, Stedman DB, Hambor JE, Blake WL,<br />
McNeish JD, Bahinski A and Cezar GG<br />
Embryonic stem cells in predictive cardiotoxicity: Laser Capture Microscopy enables assay<br />
development.<br />
Toxicol Sci, 2006, 90,1: 149-158<br />
Dahse R and Kosmehl H<br />
Cell separation and gene expression analysis in a tumor-stroma interaction model.<br />
Image Anal Stereol, 2004, 23: 153-157<br />
Delgado-Calle J, Sañudo C, Bolado A, Fernández AF, Arozamena J, Pascual-Carra MA, Rodriguez-Rey JC,<br />
Fraga MF, Bonewald L, Riancho JA.<br />
DNA methylation contributes to the regulation of sclerostin expression in human osteocytes.<br />
J Bone Miner Res. 2012 Apr;27(4):926-37. doi: 10.1002/jbmr.1491. PubMed<br />
Delgado-Calle J, Sañudo C, Sánchez-Verde L, García-Renedo RJ, Arozamena J and Riancho JA<br />
Epigenetic regulation of alkaline phosphatase in human cells of the osteoblastic lineage.<br />
Bone, 2011, 49,4: 830-838<br />
October 2012 101/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Demir O, Aysit N, Onder Z, Turkel N, Ozturk G, Sharrocks AD and Kurnaz IA<br />
ETS-domain transcription factor Elk-1 mediates neuronal survival: SMN as a potential target.<br />
Biochim Biophys Acta, 2011, 1812,6: 652-662<br />
Duan Y, Catana A, Meng Y, Yamamoto N, He S, Gupta S, Gambhir SS and Zern MA<br />
Differentiation and enrichment of hepatocyte-like cells from human embryonic stem cells in<br />
vitro and in vivo.<br />
Stem Cells, 2007, 25,12: 3058-3068<br />
Foteinos G, Hu Y, Xiao Q, Metzler B and Xu Q<br />
Rapid endothelial turnover in atherosclerosis-prone areas coincides with stem cell repair in<br />
apolipoprotein E-deficient mice.<br />
Circulation, 2008, 117,14: 1856-1863<br />
Friedemann G<br />
Live cells from cell culture: Direct isolation of poly-A(+) mRNA from individual laser<br />
microdissected cell samples obtained with the PALM MicroBeam System.<br />
PALM, 2004, Application Note, 1-3<br />
Grab DJ, Garcia-Garcia JC, Nikolskaia OV, Kim YV, Brown A, Pardo CA, Zhang Y, Becker KG, Wilson BA,<br />
de A Lima AP, Scharfstein J and Dumler JS<br />
Protease activated receptor signaling is required for african trypanosome traversal of human<br />
brain microvascular endothelial cells.<br />
PLoS Negl Trop Dis, 2009, 3,7: e479<br />
Hijjawi NS, Meloni BP, Ryan UM, Olson ME and Thompson RCA<br />
Successful in vitro cultivation of Cryptosporidium andersoni: evidence for the existence of<br />
novel extracellular stages in the life cycle and implications for the classification of<br />
Cryptosporidium.<br />
Int J Parasitol, 2002, 32: 1719-1726<br />
Langer S, Geigl JB, Ehnle S, Gangnus R, Speicher MR<br />
Live cell catapulting and recultivation does not change the karyotype of HCT116 tumor cells.<br />
Cancer Genet Cytogenet, 2005, 161,2: 174-177<br />
Lee JY, Jones C, Zern MA and Revzin A<br />
Analysis of local tissue-specific gene expression in cellular micropatterns.<br />
Anal Chem. 2006, 78,24: 8305-12.<br />
Lukas C, Melander F, Stucki M, Falck J, Bekker-Jensen S, Goldberg M, Lerenthal Y, Jackson SP, Bartek J<br />
and Lukas J<br />
Mdc1 couples DNA double-strand break recognition by Nbs1 with its H2AX-dependent<br />
chromatin retention.<br />
EMBO J, 2004, supplement. inf.1, 23: 2674-2683<br />
Lukas C, Falck J, Bartkova J, Bartek J and Lukas J<br />
Distinct spatiotemporal dynamics of mammalian checkpoint regulators induced by DNA<br />
damage.<br />
Nat Cell Biol, 2003, 5,3: 255-260<br />
Mayer A, Stich M, Brocksch D, Schütze K and Lahr G<br />
Going in vivo with laser-microdissection.<br />
Methods Enzymol, 2002, 356: 25-33<br />
Méry A, Aimond F, Ménard C, Mikoshiba K, Michalak M and Pucéat M<br />
Initiation of embryonic cardiac pacemaker activity by inositol 1,4,5-triphosphate-dependent<br />
calcium signaling.<br />
Mol Biol Cell, 2005, 16: 2414-2423<br />
Mortusewicz O, Schermelleh L, Walter J, Cardoso MC and Leonhardt H<br />
Recruitment of DNA methyltransferase I to DNA repair sites.<br />
PNAS, 2005, 102,25: 8905-8909<br />
October 2012 102/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Niyaz Y, Stich M, Sägmüller B, Burgemeister R, Friedemann G, Sauer U, Gangnus R and Schütze K<br />
Noncontact Laser Microdissection and Pressure Catapulting: Sample preparation for genomic,<br />
transcriptomic and proteomic analysis.<br />
Microarrays in Clinical Diagnostics in Methods in Molecular Medicine, 2005, 114: 1-24 (ed. Joos T and<br />
Fortina P)<br />
Niyaz Y and Lahr G<br />
Non-contact Laser Microdissection and Catapulting.<br />
Business briefings, Future Drug Discovery, 2004: 93-98<br />
Pajcini KV, Corbel SY, Sage J, Pomerantz JH and Blau HM<br />
Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian<br />
muscle.<br />
Cell Stem Cell, 2010, 7,2: 198-213<br />
Patterson-Fortin J, Shao G, Bretscher H, Messick TE and Greenberg RA<br />
Differential regulation of jamm domain deubiquitinating enzyme activity within the rap80<br />
complex.<br />
J Biol Chem, 2010, 285,40: 30971-30981<br />
Petzold A, Tisdall MM, Girbes AR, Martinian L, Thom M, Kitchen N and Smith M<br />
In vivo monitoring of neuronal loss in traumatic brain injury: a microdialysis study.<br />
Brain, 2011, 134: 464-483<br />
Schütze K, Niyaz Y, Stich M and Buchstaller A<br />
Noncontact laser microdissection and catapulting for pure sample capture.<br />
Methods Cell Biol, 2007, 82: 649-673<br />
Schütze K, Burgemeister R, Clement-Sengewald A, Ehnle S, Friedemann G, Lahr G, Sägmüller B, Stich M<br />
and Thalhammer S<br />
Non-contact live cell laser micromanipulation using PALM � MicroLaser Systems.<br />
PALM, 2003, Scientific Edition No.11<br />
Seitz G, Warmann SW, Fuchs J, Mau-Holzmann UA, Ruck P, Heitmann H, Hoffman RM, Mahrt J, Müller GA<br />
and Wessels JT<br />
Visualization of xenotransplanted human rhabdomyosarcoma after transfection with red<br />
fluorescent protein.<br />
J Pediatr Surg, 2006, 41,8: 1369-1376<br />
Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M,<br />
Cremer T and Goldman RD<br />
The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization<br />
and transcription.<br />
Genes Dev, 2008, 22,24: 3409-3421<br />
Steigemann P, Wurzenberger C, Schmitz MH, Held M, Guizetti J, Maar S and Gerlich DW<br />
Aurora B-mediated abscission checkpoint protects against tetraploidization.<br />
Cell, 2009, 136,3: 473-484<br />
Stich M, Thalhammer S, Burgemeister R, Friedemann G, Ehnle S, Lüthy C and Schütze K<br />
Live cell catapulting and recultivation.<br />
Pathol Res Pract, 2003, 199: 405-409<br />
Stich M, Thalhammer S, Burgemeister R and Schütze K<br />
Laser micromanipulation of living cells.<br />
Reprinted from: 15 th World Congress of the International Society for Laser Surgery and Medicine, Munich<br />
(Germany), June 25-27. 2003, Monduzzi Editore, 2003: 51-55<br />
Stybayeva G, Zhu H, Ramanculov E, Dandekar S, George M and Revzin A<br />
Micropatterned co-cultures of T-lymphocytes and epithelial cells as a model of mucosal<br />
immune system.<br />
Biochem Biophys Res Commun, 2009, 380,3: 575-580<br />
Tashiro S, Walter J, Shinohara A, Kamada N and Cremer T<br />
Rad51 Accumulation at sites of DNA damage and in postreplicative chromatin.<br />
J Cell Biol, 2000, 150,2: 283-291<br />
October 2012 103/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />
Laser microtools in cell biology and molecular medicine.<br />
Laser Physics, 2003, 13: 681-691<br />
Ukawala M, Chaudhari K, Rajyaguru T, Manjappa AS, Murthy RS, Gude R.<br />
Laminin receptor-targeted etoposide loaded polymeric micelles: a novel approach for the<br />
effective treatment of tumor metastasis.<br />
J Drug Target. 2012 Jan;20(1):55-66. PubMed PMID: 21967151. PubMed<br />
Ziegler L, Segal-Ruder Y, Coppola G, Reis A, Geschwind D, Fainzilber M and Goldstein RS<br />
A human neuron injury model for molecular studies of axonal regeneration.<br />
Exp Neurol, 2010, 223,1: 119-127<br />
1.5 Reproductive Medicine<br />
Buchholz T and Clement-Sengewald A<br />
Möglichkeiten und Grenzen der Polkörperchendiagnostik.<br />
Reproduktionsmedizin, 2000, 16: 343-353<br />
Burgemeister R, Schütze K, Minderer S and Gloning KP<br />
Single fetal cells separated by the Laser MicroBeam Technique.<br />
BIOforum Int, 1999, 3: 119-121<br />
Choolani M, Mahyuddin AP, Hahn S.<br />
The promise of fetal cells in maternal blood.<br />
Best Pract Res Clin Obstet Gynaecol. 2012 Oct;26(5):655-67. PubMed<br />
Clement-Sengewald A, Buchholz T and Schütze K, Berg U and Berg FD<br />
Noncontact, laser-mediated extraction of polar bodies for prefertilization genetic diagnosis.<br />
J Assist Reprod Gen, 2002, 19,4: 183-194<br />
Clement-Sengewald A, Buchholz T and Schütze K<br />
Laser microdissection as a new approach to prefertilization genetic diagnosis.<br />
Pathobiology, 2000, 68: 232-236<br />
Clement-Sengewald A, Schütze K, Sandow S, Nevinny C and Pösl H<br />
PALM Robot-MicroBeam for laser-assisted fertilization, embryo hatching and single-cell<br />
prenatal diagnosis.<br />
Wyss P, Tadir Y, Tromberg BJ, Haller U (eds): Photomedicine in Gynecology and Reproduction. Basel,<br />
Karger, 2000: 340-351<br />
Clement-Sengewald A, Schütze K, Ashkin A, Palma GA, Kerlen G and Brem G<br />
Animal experimentation: Fertilization of bovine oocytes induced solely with combined laser<br />
microbeam and optical tweezers.<br />
J Assist Reprod Gen, 1996, 13: 259-265<br />
Clement-Sengewald A, Schütze K, Heinze A, Palma GA, Pösl H and Brem G<br />
Laser assisted cell fusion and cytoplast transfer in early mammalian embryos.<br />
Proceedings of the International Society for Optical Engineering; Lasers in Otolaryngology, Dermatology<br />
and Tissue Welding. SPIE 1993, 1876: 187-194<br />
Enginsu ME, Schütze K, Bellanca S, Pensis M, Campo R, Bassil S, Donnez J and Gordt S<br />
Micromanipulation of mouse gametes with laser microbeam and optical tweezers.<br />
Hum Reprod, 1995, 10: 1761-1764<br />
de Groot CJ, Steegers-Theunissen RP, Guzel C, Steegers EA and Luider TM<br />
Peptide patterns of laser dissected human trophoblasts analyzed by matrix-assisted laser<br />
desorption/ionisation-time of flight mass spectrometry.<br />
Proteomics, 2005, 5: 597-607<br />
Hahn S and Holzgreve W<br />
Prenatal Diagnosis using fetal cells and cell-free fetal DNA in maternal blood: what is currently<br />
feasible?<br />
Clin Obstet Gynecol, 2002, 45,3: 649-656<br />
October 2012 104/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Hahn S, Zhong XY, Troeger C, Burgemeister R, Gloning K and Holzgreve W<br />
Current applications of single-cell PCR.<br />
CMLS Cell Mol Life Sci, 2000, 57: 96-105<br />
Kolialexi A, Vrettou C, Traeger-Synodinos J, Burgemeister R, Papantoniou N, Kanavakis E, Antsaklis A and<br />
Mavrou A<br />
Noninvasive prenatal diagnosis of beta-thalassaemia using individual fetal erythroblasts<br />
isolated from maternal blood after enrichment.<br />
Prenat Diagn, 2007, 27,13: 1228-1232<br />
Lee SD, Kim MR, Hwang PG, Shim SS, Yoon BH and Kim CJ<br />
Chorionic plate vessels as an origin of amniotic fluid neutrophils.<br />
Pathol Int, 2004, 54: 516-522<br />
Liow SL , Bongso A and Ng SC<br />
Fertilization, embryonic development and implantation of mouse oocytes with one or two<br />
laser-drilled holes in the zona, and inseminated at different sperm concentrations.<br />
Hum Reprod, 1996, 11,6: 1273-1280<br />
Liow SL, Ng SC, Vasuthevan S, Tok V, Bongso A and Ratnam SS<br />
Laser zona cutting of mouse oocytes.<br />
Theriogenology, 1994, 41: 239<br />
Mantzaris D, Cram D, Healy C, Howlett D and Kovacs G<br />
Preliminary report: Correct diagnosis of sex in fetal cells isolated from cervical mucus during<br />
early pregnancy.<br />
Aust N Z J Obstet Gynaecol, 2005, 45,6: 529-532<br />
Ng SC, Liow SL Schütze K, Vasuthevan S, Bongso A and Ratnam SS<br />
The use of ultra-violet microbeam laser for laser zona dissection in the mouse.<br />
J Assist Reprod Gen, 1993, Suppl 10: 204<br />
Peters DD, Marschall S, Mahabir E, Boersma A, Heinzmann U, Schmidt J and Hrabé de Angelis M<br />
Risk assessment of mouse hepatitis virus infection via in vitro fertilization and embryo<br />
transfer by the use of zona-intact and laser-microdissected oocytes.<br />
Biol Reprod, 2006, 74: 246-252<br />
Schütze K, Böhm M, Thalhammer S and Pösl H<br />
Laser Mikroablation für die Genanalyse auf Einzelzellbasis.<br />
BIOforum, 1997, 20: 82-87<br />
Schütze K, Clement-Sengewald A and Berg FD<br />
“Non-contact“ laser micromanipulation of gametes and embryos. Part I: The UV-laser<br />
microbeam. Part II: IR-optical tweezers trap.<br />
Hum Reprod Update, 1995, 1,1<br />
Schütze K, Clement-Sengewald A and Ashkin A<br />
Zona drilling and sperm insertion with combined laser microbeam and optical tweezers.<br />
Fertil and Steril, 1994, 61,4: 783-786<br />
Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />
Laser microtools in cell biology and molecular medicine.<br />
Laser Physics, 2003, 13: 681-691<br />
1.6 Chromosomes<br />
Aleksic K, Lackner C, Geigl JB, Schwarz M, Auer M, Ulz P, Fischer M, Trajanoski Z, Otte M and Speicher<br />
MR<br />
Evolution of genomic instability in diethylnitrosamine-induced hepatocarcinogenesis in mice.<br />
Hepatology, 2011, 53,3: 895-904<br />
October 2012 105/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Aubele MM, Cummings MC, Mattis AE, Zitzelsberger HF, Walch AK, Kremer M, Höfler H and Werner M<br />
Accumulation of chromosomal imbalances from intraductal proliferative lesions to adjacent in<br />
situ and invasive ductal breast cancer.<br />
Diagn Mol Pathol, 2000, 9,1: 14-19<br />
Aubele M, Cummings M, Walch A, Zitzelsberger H, Nahrig J, Höfler H and Werner M<br />
Heterogeneous chromosomal aberrations in intraductal breast lesions adjacent to invasive<br />
carcinoma.<br />
Anal Cell Pathol, 2000, 20,1: 17-24<br />
Aubele M, Mattis A, Zitzelsberger H, Walch A, Kremer M, Welzl G, Höfler H and Werner M<br />
Extensive ductal carcinoma in situ with small foci of invasive ductal carcinoma: evidence of<br />
genetic resemblance by CGH.<br />
Int J Cancer, 2000, 85: 82-86<br />
Balogh Z, Reiniger L, Rajnai H, Csomor J, Szepesi A, Balogh A, Deák L, Gagyi E, Bödör C and Matolcsy A<br />
High rate of neoplastic cells with genetic abnormalities in proliferation centers of chronic<br />
lymphocytic leukemia.<br />
Leuk Lymphoma, 2011, 52,6: 1080-1084<br />
Cañueto J, Santos-Briz A, García JL, Robledo C and Unamuno P<br />
Onychomatricoma: Genome-wide analyses of a rare nail matrix tumor.<br />
J Am Acad Dermatol, 2010, in press<br />
Cernohorska H, Kubickova S, Vahala J, Rubes J.<br />
Molecular Insights into X;BTA5 Chromosome Rearrangements in the Tribe Antilopini<br />
(Bovidae).<br />
Cytogenet Genome Res. 2012 Feb 11. [Epub ahead of print] PubMed<br />
Cernohorska H, Kubickova S, Vahala J, Robinson TJ and Rubes J<br />
Cytotypes of Kirk's dik-dik (Madoqua kirkii,Bovidae) show multiple tandem fusions.<br />
Cytogenet Genome Res, 2011, 132,4: 255-263<br />
Cremer M, Schütze K, Scherthan H, Goering F and Cremer T<br />
Collection of individual chromosomes and nuclear segments by laser microdissection and laser<br />
pressure catapulting.<br />
Med Gen, 1998, 1: 100, Abstract<br />
Di Berardino D, Vozdova M, Kubičková S, Cernohorska H, Coppola G, Coppola G, Enne G and Rubes J<br />
Sexing river buffalo (Bubalus bubalis L.), sheep (Ovis aries L.), goat (Capra hircus L.), and<br />
cattle spermatozoa by double color FISH using bovine (Bos Taurus L.) X- and Y-painting<br />
probes.<br />
Mol Reprod Dev, 2004, 67: 108-115<br />
Drosopoulou E, Nakou I, Síchová J, Kubíčková S, Marec F, Mavragani-Tsipidou P<br />
Sex chromosomes and associated rDNA form a heterochromatic network in the polytene nuclei<br />
of Bactrocera oleae (Diptera: Tephritidae).<br />
Genetica. 2012 Jul 24. PubMed<br />
Fiegler H, Geigl JB, Langer S, Rigler D, Porter K, Unger K, Carter NP and Speicher MR<br />
High resolution array-CGH analysis of single cells.<br />
Nucleic Acids Res, 2007, 35,3: e15<br />
Fominaya A; Linares C, Loarce Y and Ferrer E<br />
Microdissection and microcloning of plant chromosomes.<br />
Cytogenet Genome Res, 2005, 109: 8-14<br />
Fuková I, Traut W, Vitková M, Nguyen P, Kubičková S and Marec F<br />
Probing the W chromosome of the codling moth, Cydia pomonella, with sequences from microdissected<br />
sex chromatin.<br />
Chromosoma, 2007, 116,2: 135-145<br />
Geigl JB, Obenauf AC, Waldispuehl-Geigl J, Hoffmann EM, Auer M, Hörmann M, Fischer M, Trajanoski Z,<br />
Schenk MA, Baumbusch LO and Speicher MR<br />
Identification of small gains and losses in single cells after whole genome amplification on<br />
tiling oligo arrays.<br />
Nucleic Acids Res, 2009, 37,15: e105<br />
October 2012 106/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Geigl JB and Speicher MR<br />
Single-cell isolation from cell suspensions and whole genome amplification from single cells to<br />
provide templates for CGH analysis.<br />
Nat Protoc, 2007, 2,12: 3173-3184<br />
Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, Save V, O'Donovan M, Eijk PP, Alderson D, Ylstra B,<br />
Caldas C and Fitzgerald RC<br />
Integrative analysis of array-comparative genomic hybridisation and matched gene expression<br />
profiling data reveals novel genes with prognostic significance in oesophageal<br />
adenocarcinoma.<br />
Gut, 2011, 60,10: 1317-1326<br />
Gotter AL, Nimmakayalu MA, Jalali GR, Hacker AM, Vorstman J, Conforto Duffy D,<br />
Medne L and Emanuel BS<br />
A palindrome-driven complex rearrangement of 22q11.2 and 8q24.1 elucidated using novel<br />
technologies.<br />
Genome Res, 2007, 174: 470-481<br />
Green AR, Krivinskas S, Young P, Rakha EA, Paish EC, Powe DG and Ellis IO<br />
Loss of expression of chromosome 16q genes DPEP1 and CTCF in lobular carcinoma in situ of<br />
the breast.<br />
Breast Cancer Res Treat, 2009, 113,1: 59-66<br />
Hahtola S, Burghart E, Jeskanen L, Karenko L, Abdel-Rahman WM, Polzer B, Kajanti M, Peltomäki P,<br />
Pettersson T, Klein CA and Ranki A<br />
Clinicopathological characterization and genomic aberrations in subcutaneous panniculitis-like<br />
T-cell lymphoma.<br />
J Invest Dermatol, 2008, 128,9: 2304-2309<br />
Hartmann S, Martin-Subero JI, Gesk S, Hüsken J, Giefing M, Nagel I, Riemke J, Chott A, Klapper W,<br />
Parrens M, Merlio JP, Küppers R, Bräuninger A, Siebert R and Hansmann ML<br />
Detection of genomic imbalances in microdissected Hodgkin and Reed-Sternberg cells of<br />
classical Hodgkin's lymphoma by array-based comparative genomic hybridization.<br />
Haematologica, 2008, 93,9: 1318-1326<br />
Hartmann A, Schlake G, Zaak D, Hungerhuber E, Hofstetter A, Hofstaedter F and Knuechel R<br />
Occurrence of chromosome 9 and p53 alterations in multifocal dysplasia and carcinoma In Situ<br />
of human urinary bladder.<br />
Cancer Res, 2002, 62: 809-818<br />
Hartmann A, Rösner U, Schlake G, Dietmaier W, Zaak D, Hofstaedter F and Knuechel R<br />
Clonality and genetic divergence in multifocal low-grade superficial urothelial carcinoma as<br />
determined by chromosome 9 and p53 deletion analysis.<br />
Lab Invest, 2000, 80,5: 709-718<br />
Hobza R, Lengerova M, Cernohorska H, Rubes J and Vyskot B<br />
FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex<br />
chromosomes of Silene latifolia.<br />
Chromosome Res, 2004, 12,3: 245-250<br />
Koene GPJ, Arts-Hilkes YHA, van der Ven KJW, Rozemuller EH, Slootweg PJ, de Weger RA and Tilanus MG<br />
High level of chromosome 15 aneuploidy in head and neck squamous cell carcinoma lesions<br />
identified by FISH analysis: limited value of ß2-microglobulin LOH analysis.<br />
Tissue Antigens, 2004, 64: 452-461<br />
Kopecna O, Kubickova S, Cernohorska H, Cabelova K, Vahala J, Rubes J.<br />
Isolation and comparison of tribe-specific centromeric repeats within Bovidae.<br />
J Appl Genet. 2012 Jan 17. [Epub ahead of print] PubMed<br />
October 2012 107/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Krylov V, Kubickova S, Rubes J, Macha J, Tlapakova T, Seifertova E and Sebkova N<br />
Preparation of Xenopus tropicalis whole chromosome painting probes using laser<br />
microdissection and reconstruction of X. laevis tetraploid karyotype by Zoo-FISH.<br />
Chromosome Res, 2010, 18,4: 431-439<br />
Kubičková S, Cernohorska H, Musilova P and Rubes J<br />
The use of laser microdissection for the preparation of chromosome-specific painting probes in<br />
farm animals.<br />
Chromosome Res, 2002, 10: 571-577<br />
Langer S, Geigl JB, Gangnus R and Speicher MR<br />
Sequential application of interphase-FISH and CGH to single cells.<br />
Lab Invest, 2005, 85,4: 582-592<br />
Langer S, Geigl JB, Ehnle S, Gangnus R, Speicher MR<br />
Live cell catapulting and recultivation does not change the karyotype of HCT116 tumor cells.<br />
Cancer Genet Cytogenet, 2005, 161,2: 174-177<br />
Lau CS, Yu CB, Wong HK, Fan DS, Mak HT, Wong KW, Lam DS, Pang CP and Choy KW<br />
Allelic imbalance at 13q31 is associated with reduced GPC6 in Chinese with sporadic<br />
retinoblastoma.<br />
Br J Ophthalmol, 2010, 94,3: 357-363<br />
Louzada S, Paço A, Kubickova S, Adega F, Guedes-Pinto H, Rubes J and Chaves R<br />
Different evolutionary trails in the related genomes Cricetus cricetus and Peromyscus<br />
eremicus (Rodentia, Cricetidae) uncovered by orthologous satellite DNA repositioning.<br />
Micron, 2008, 39,8: 1149-1155<br />
Luebke AM, Schlomm T, Gunawan B, Bonkhoff H, Füzesi L and Erbersdobler A<br />
Simultaneous tumour-like, atypical basal cell hyperplasia and acinar adenocarcinoma of the<br />
prostate: a comparative morphological and genetic approach.<br />
Virchows Archiv, 2005, 446,3: 338-341<br />
Mathiesen RR, Fjelldal R, Liestøl K, Due EU, Geigl JB, Riethdorf S, Borgen E, Rye IH, Schneider IJ,<br />
Obenauf AC, Mauermann O, Nilsen G, Christian Lingjaerde O, Børresen-Dale AL, Pantel K, Speicher MR,<br />
Naume B, Baumbusch LO.<br />
High-resolution analyses of copy number changes in disseminated tumor cells of patients with<br />
breast cancer.<br />
Int J Cancer. 2011 Sep 20. doi: 10.1002/ijc.26444. PubMed<br />
Matsunaga S, Kawano S, Michimoto T, Higashiyama T, Nakao S, Sakai A and Kuroiwa T<br />
Semi-automatic laser beam microdissection of the Y chromosome and analysis of Y<br />
chromosome DNA in a diocious plant, Silene latifolia.<br />
Plant Cell Physiol, 1999, 40,1: 60-68<br />
McNally LR, Henk WG, Cooper RK<br />
Laser pressure catapulting followed by B actin gene identification in Japanese quail<br />
macrochromosomes and microchrosomosomes using Teflon-coated coverslip slides.<br />
J Microsc, 2005, 218: 219-224<br />
Musilova P, Kubickova S, Zrnova E, Horin P, Vahala J and Rubes J<br />
Karyotypic relationships among Equus grevyi, Equus burchelli and domestic horse defined<br />
using horse chromosome arm-specific probes.<br />
Chromosome Res, 2007, 15,6: 807-813<br />
Obenauf AC, Schwarzbraun T, Auer M, Hoffmann EM, Waldispuehl-Geigl J, Ulz P, Günther B, Duba HC,<br />
Speicher MR and Geigl JB<br />
Mapping of balanced chromosome translocation breakpoints to the basepair level from<br />
microdissected chromosomes.<br />
J Cell Mol Med, 2010, 14,8: 2078-2084<br />
Obermann EC, Junker K, Stoehr R, Dietmaier W, Zaak D, Schubert J, Hofstaedter F, Knuechel R and<br />
Hartmann A<br />
Frequent genetic alterations in flat urothelial hyperplasias and concomitant papillary bladder<br />
cancer as detected by CGH, LOH, and FISH analyses.<br />
J Pathol, 2003, 199: 50-57<br />
October 2012 108/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Pyakurel P, Montag U, Castaños-Vélez E, Kaaya E, Christensson B, Tönnies H, Biberfeld P and Heiden T<br />
CGH of microdissected Kaposi's sarcoma lesions reveals recurrent loss of chromosome Y in<br />
early and additional chromosomal changes in late tumour stages.<br />
Aids, 2006, 20: 1805-1812<br />
Ráb P, Rábová M, Pereira CS, Collares-Pereira MJ and Pelikánová S<br />
Chromosome studies of European cyprinid fishes: interspecific homology of leuciscine<br />
cytotaxonomic marker-the largest subtelocentric chromosome pair as revealed by crossspecies<br />
painting.<br />
Chromosome Res, 2008, 16,6: 863-873<br />
Raffegerst SH, Hoelzlwimmer G, Kunder S, Mysliwietz J, Quintanilla-Martinez L and Schendel DJ<br />
Diverse hematological malignancies including hodgkin-like lymphomas develop in chimeric<br />
MHC class II transgenic mice.<br />
PLoS One, 2009, 4,12: 1-12<br />
Rezácová O, Kubickova S, Cernhorska H and Rubes J<br />
Comparison of spontaneous background genomic aberration frequencies among cattle, pig and<br />
humans using dual-colored FISH.<br />
Chromosome Res, 2003: 715-724<br />
Rubes J, Pagacova E, Kopecna O, Kubickova S, Cernohorska H, Vahala and Di Berardino D<br />
Karyotype, centric fusion polymorphism and chromosomal aberrations in captive-born<br />
mountain reedbuck (Redunca fulvorufula).<br />
Cytogenet Genome Res, 2007, 116,4: 263-268<br />
Rubes J, Kubickova S, Pagacova E, Cernohorska H, Di Berardino D, Antoninova M, Vahala J and Robinson<br />
TJ<br />
Phylogenomic study of spiral-horned antelope by cross-species chromosome painting.<br />
Chromosome Res, 2008, 16,7: 935-947<br />
Rubes J, Kubickova S, Musilova P, Amaral EM, Brunner RM and Goldammer T<br />
Assignment of chromosome rearrangements between X chromosomes of human and cattle by<br />
laser microdissection and zoo-FISH.<br />
Chromosome Res, 2005, 13,6: 569-574<br />
Sanz MJ, Loarce Y, Ferrer E, Fominaya A.<br />
Use of tyramide-fluorescence in situ hybridization and chromosome microdissection for<br />
ascertaining homology relationships and chromosome linkage group associations in oats.<br />
Cytogenet Genome Res. 2012;136(2):145-56. PubMed<br />
Schermelleh L, Thalhammer S, Heckl W, Pösl H, Cremer T, Schütze K and Cremer M<br />
Laser microdissetion and laser pressure catapulting for the generation of chromosome-specific<br />
paint probes.<br />
BioTechniques, 1999, 27: 362-367<br />
Schmidt A, Schmitz R, Giefing M, Martin-Subero JI, Gesk S, Vater I, Massow A, Maggio E, Schneider M,<br />
Hansmann ML, Siebert R and Küppers R<br />
Rare occurrence of biallelic CYLD gene mutations in classical Hodgkin lymphoma.<br />
Genes Chromosomes Cancer, 2010, 49,9: 803-809<br />
Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M,<br />
Cremer T and Goldman RD<br />
The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization<br />
and transcription.<br />
Genes Dev, 2008, 22,24: 3409-3421<br />
Stark RW, Rubio-Sierra FJ, Thalhammer S and Heckl WM<br />
Combined nanomanipulation by atomic force microscopy and UV-laser ablation for<br />
chromosomal dissection.<br />
Eur Biophys J, 2003, 32: 33-39<br />
Thalhammer S, Langer S, Speicher MR, Heckl WM and Geigl JB<br />
Generation of chromosome painting probes from single chromosomes by laser microdissection<br />
and linker-adaptor PCR.<br />
Chromosome Res, 2004, 12: 337-343<br />
October 2012 109/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Thalhammer S, Stark RW and Schütze K<br />
Laser microdissection of metaphase chromosomes and characterization by atomic force<br />
microscopy.<br />
J Biomed Optics, 1997, 2,1: 115-119´<br />
Vandewoestyne M, Kumps C, Swerts K, Menten B, Lammens T, Philippé J, De Preter K, Laureys G, Van<br />
Roy N, Speleman F and Deforce D<br />
Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment<br />
risk assessment by array comparative genomic hybridization.<br />
Int J Cancer, 2011, in press<br />
Vozdova M, Kubickova S, Cernohorska H and Rubes J<br />
Detection of translocation rob(1;29) in bull sperm using a specific DNA probe.<br />
Cytogenet Genome Res, 2008, 120,1-2: 102-105<br />
Weckermann D, Polzer B, Ragg T, Blana A, Schlimok G, Arnholdt H, Bertz S, Harzmann R and Klein CA<br />
Perioperative activation of disseminated tumor cells in bone marrow of patients with prostate<br />
cancer.<br />
J Clin Oncol, 2009, 27,10: 1549-1556<br />
Werner M, Mattis A, Aubele M, Cummings M, Zitzelsberger H, Hutzler P and Höfler H<br />
20q13.2 amplification in intraductal hyperplasia adjacent to in situ and invasive ductal<br />
carcinoma of the breast.<br />
Virchows Arch, 1999, 435,5: 469-472<br />
1.7 Plant Research<br />
Angeles G, Berrio-Sierra J, Joseleau JP, Lorimier P, Lefèbvre A and Ruel K<br />
Preparative laser capture microdissection and single-pot cell wall material preparation: a<br />
novel method for tissue-specific analysis.<br />
Planta, 2006, 224,1: 228-232<br />
Berthet S, Demont-Caulet N, Pollet B, Bidzinski P, Cézard L, Le Bris P, Borrega N, Hervé J, Blondet E,<br />
Balzergue S, Lapierre C and Jouanin L<br />
Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of<br />
Arabidopsis thaliana stems.<br />
Plant Cell, 2011, 23,3: 1124-1137<br />
Borisjuk L, Rolletschek H, Neuberger T.<br />
Surveying the plant's world by magnetic resonance imaging.<br />
Plant J. 2012 Apr;70(1):129-46. doi: 10.1111/j.1365-313X.2012.04927.x. PubMed<br />
Brooks L 3rd, Strable J, Zhang X, Ohtsu K, Zhou R, Sarkar A, Hargreaves S, Elshire RJ, Eudy D,<br />
Pawlowska T, Ware D, Janick-Buckner D, Buckner B, Timmermans MC, Schnable PS, Nettleton D and<br />
Scanlon MJ<br />
Microdissection of shoot meristem functional domains.<br />
PLoS Genet, 2009, 5,5: e1000476<br />
Connolly C<br />
Laser ablation reveals sexual attraction mechanism in flowers.<br />
Biophot Int, 2001, 8,9: 61-63<br />
Corea OR, Ki C, Cardenas CL, Kim SJ, Brewer SE, Patten AM, Davin LB, Lewis NG.<br />
Arogenate dehydratase isoenzymes profoundly and differentially modulate carbon<br />
flux into lignins.<br />
J Biol Chem. 2012 Mar 30;287(14):11446-59. PubMed PMID: 22311980. PubMed<br />
Damiani I, Baldacci-Cresp F, Hopkins J, Andrio E, Balzergue S, Lecomte P, Puppo A, Abad P, Favery B,<br />
Hérouart D.<br />
Plant genes involved in harbouring symbiotic rhizobia or pathogenic nematodes.<br />
New Phytol. 2012 Apr;194(2):511-22. doi: 10.1111/j.1469-8137.2011.04046.x. PubMed<br />
October 2012 110/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Deeken R, Ache P, Kajahn I, Klinkenberg J, Bringmann G and Hedrich R<br />
Identification of Arabidopsis thaliana phloem RNAs provides a search criterion for phloembased<br />
transcripts hidden in complex datasets of microarray experiments.<br />
Plant J, 2008, 55,5: 746-759<br />
Fominaya A; Linares C, Loarce Y and Ferrer E<br />
Microdissection and microcloning of plant chromosomes.<br />
Cytogenet Genome Res, 2005, 109: 8-14<br />
Fosu-Nyarko J, Jones MG and Wang Z<br />
Application of laser microdissection to study plant-fungal pathogen interactions.<br />
Methods Mol Biol, 2010, 638: 153-163<br />
Fosu-Nyarko J, Jones MG and Wang Z<br />
Functional characterization of transcripts expressed in early-stage Meloidogyne javanicainduced<br />
giant cells isolated by laser microdissection.<br />
Mol Plant Pathol, 2009, 10,2: 237-248<br />
Gil L, Yaron I, Shalitin D, Sauer N, Turgeon R and Wolf S<br />
Sucrose transporter plays a role in phloem loading in CMV-infected melon plants that are<br />
defined as symplastic loaders.<br />
Plant J, 2011, 66,2: 366-374<br />
Gomez S, Javot H, Deewatthanawong P, Torres-Jerez I, Tang Y, Blancaflor E, Udvardi M and Harrison MJ<br />
Medicago truncatula and Glomus intraradices gene expression in cortical cells harboring<br />
arbuscules in the arbuscular mycorrhizal symbiosis.<br />
BMC Plant Biol, 2009, 9:10<br />
Guan X, Lee JJ, Pang M, Shi X, Stelly DM and Chen ZJ<br />
Activation of Arabidopsis seed hair development by cotton fiber-related genes.<br />
PLoS One, 2011, 6,7: e21301<br />
Gutjahr C, Radovanovic D, Geoffroy J, Zhang Q, Siegler H, Chiapello M, Casieri L, An K, An G, Guiderdoni<br />
E, Kumar CS, Sundaresan V, Harrison MJ, Paszkowski U.<br />
The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule<br />
formation in rice.<br />
Plant J. 2012 Mar;69(5):906-20. doi: 10.1111/j.1365-313X.2011.04842.x. PubMed<br />
Hobza R, Lengerova M, Cernohorska H, Rubes J and Vyskot B<br />
FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex<br />
chromosomes of Silene latifolia.<br />
Chromosome Res, 2004, 12,3: 245-250<br />
Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N and Küster H<br />
Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots,<br />
including CAAT-box transcription factor gene expression correlating with fungal contact and<br />
spread.<br />
Plant Physiol, 2011, 157,4: 2023-2043<br />
Ivashikina N, Deeken R, Ache P, Kranz E, Pommerrenig B, Sauer N and Hedrich R<br />
Isolation of AtSUC2 promoter-GFP-marked companion cells for patch-clamp studies and<br />
expression profiling.<br />
Plant J, 2003, 36,6: 931-945<br />
Jasik J, Schiebold S, Rolletschek H, Denolf P, Van Adenhove K, Altmann T and Borisjuk L<br />
Subtissue-specific evaluation of promoter efficiency by quantitative fluorometric assay in laser<br />
microdissected tissues of rapeseed.<br />
Plant Physiol, 2011, 157,2: 563-573<br />
Jia Y, Lisch DR, Ohtsu K, Scanlon MJ, Nettleton D and Schnable PS<br />
Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and<br />
unexpected changes in the expression of transposons, genes, and 24-nt small RNAs.<br />
PLoS Genet, 2009, 5,11: e10000737<br />
October 2012 111/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Kaspar S, Weier D, Weschke W, Mock HP, Matros A.<br />
Protein analysis of laser capture micro-dissected tissues revealed cell-type specific biological<br />
functions in developing barley grains.<br />
Anal Bioanal Chem. 2010 Dec;398(7-8):2883-93. PubMed<br />
Kehr J<br />
Single cell technology.<br />
Curr Opin Plant Biol, 2003, 6,6: 617-621<br />
Kleber R and Kehr J<br />
Preparation and quality assessment of RNA from cell-specific samples obtained by laser<br />
microdissection.<br />
Methods Mol Biol, 2006, 323: 367-377<br />
Lee C, Teng Q, Huang W, Zhong R and Ye ZH<br />
The F8H glycosyltransferase is a functional paralog of FRA8 involved in glucuronoxylan<br />
biosynthesis in Arabidopsis.<br />
Plant Cell Physiol, 2009, 50,4: 812-827<br />
Levy A, Chang BJ, Abbott LK, Kuo J, Harnett G and Inglis TJJ<br />
Invasion of spores of the arbuscular mycorrhizal fungus Gigaspora decipiens by Burkholderia<br />
spp.<br />
Appl Environ Microbiol, 2003, 69: 6250-6256<br />
Lister R, Gregory BD and Ecker JR<br />
Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond.<br />
Curr Opin Plant Biol, 2009, 12,2: 107-118<br />
Matas AJ, Yeats TH, Buda GJ, Zheng Y, Chatterjee S, Tohge T, Ponnala L, Adato A, Aharoni A, Stark R,<br />
Fernie AR, Fei Z, Giovannoni JJ and Rose JK<br />
Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides<br />
insights into metabolic and regulatory specialization and cuticle formation.<br />
Plant Cell, 2011, in press<br />
Matsunaga S, Schütze K, Donnison IS, Grant SR, Kuroiwa T and Kawano S<br />
Single pollen typing combined with laser-mediated manipulation.<br />
Plant Journal, 1999, 20,3: 371-378<br />
Matsunaga S, Kawano S, Michimoto T, Higashiyama T, Nakao S, Sakai A and Kuroiwa T<br />
Semi-automatic laser beam microdissection of the Y chromosome and analysis of Y<br />
chromosome DNA in a dioecious plant, Silene latifolia.<br />
Plant Cell Physiol, 1999, 40,1: 60-68<br />
Meimberg M, Thalhammer S, Brachmann A, Müller B, Eichacker LA, Heckl WM and Heubl G<br />
Selection of chloroplasts by laser MicroBeam microdissection for single-chloroplast PCR.<br />
BioTechniques, 2003, 34,6: 1238-1243<br />
Nakashima J, Chen F, Jackson L, Shadle G and Dixon RA<br />
Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa): effects<br />
on lignin composition in specific cell types.<br />
New Phytol, 2008, 179,3: 738-750<br />
Nogueira FT, Chitwood DH, Madi S, Ohtsu K, Schnable PS, Scanlon MJ and Timmermans MC<br />
Regulation of small RNA accumulation in the maize shoot apex.<br />
PLoS Genet, 2009, 5,1: e1000320<br />
Ohkama-Ohtsu N, Radwan S, Peterson A, Zhao P, Badr AF, Xiang C and Oliver DJ<br />
Characterization of the extracellular gamma-glutamyl transpeptidases, GGT1 and GGT2, in<br />
Arabidopsis.<br />
Plant J, 2007, 49,5: 865-877<br />
Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans MC, Beck J, Buckner<br />
B, Janick-Buckner D, Nettleton D, Scanlon MJ and Schnable PS<br />
Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).<br />
Plant J, 2007, 52,3: 391-404<br />
October 2012 112/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Olofsson L, Lundgren A and Brodelius PE<br />
Trichome isolation with and without fixation using laser microdissection and pressure<br />
catapulting followed by RNA amplification: Expression of genes of terpene metabolism in<br />
apical and sub-apical trichome cells of Artemisia annua L.<br />
Plant Science, 2012, in press<br />
Olsson ME, Olofsson LM, Lindahl AL, Lundgren A, Brodelius M and Brodelius PE<br />
Localization of enzymes of artemisinin biosynthesis to the apical cells of glandular secretory<br />
trichomes of Artemisia annua L.<br />
Phytochemistry, 2009, 70,9: 1123-1128<br />
Patten AM, Jourdes M, Cardenas CL, Laskar DD, Nakazawa Y, Chung BY, Franceschi VR, Davin LB and<br />
Lewis NG<br />
Probing native lignin macromolecular configuration in Arabidopsis thaliana in specific cell wall<br />
types: further insights into limited substrate degeneracy and assembly of the lignins of ref8,<br />
fah 1-2 and C4H::F5H lines.<br />
Mol Biosyst, 2010, 6,3: 499-515<br />
Petsch KA, Ma C, Scanlon MJ and Jorgensen RA<br />
Targeted forward mutagenesis by transitive RNAi.<br />
Plant J, 2010, 61: 873-882<br />
Peukert M, Matros A, Lattanzio G, Kaspar S, Abadía J and Mock HP<br />
Spatially resolved analysis of small molecules by matrix-assisted laser desorption/ionization<br />
mass spectrometric imaging (MALDI-MSI).<br />
New Phytol, 2011, in press, doi: 10.1111/j.1469-8137.2011.03970.x<br />
Polster J, Dithmar H, Burgemeister R, Friedemann G and Feucht W<br />
Flavonoids in plant nuclei: detection by laser microdissection and pressure catapulting<br />
(LMPC), in vivo staining, and uv-visible spectroscopic titration.<br />
Physiol Plant, 2006, 128: 163-174<br />
Ramsay K, Wang Z and Jones MGK<br />
Using laser capture microdissection to study gene expression in early stages of giant cells<br />
induced by root-knot nematodes.<br />
Mol Plant Pathol, 2004, 5,6: 587-592<br />
Rüggeberg M, Speck T and Burgert I<br />
Structure-function relationships of different vascular bundle types in the stem of the Mexican<br />
fanpalm (Washingtonia robusta).<br />
New Phytol, 2009, 182,2: 443-450<br />
Rüggeberg M, Speck T, Paris O, Lapierre C, Pollet B, Koch G and Burgert I<br />
Stiffness gradients in vascular bundles of the palm Washingtonia robusta.<br />
Proc Biol Sci, 2008, 275,1648: 2221-2229<br />
Santi S, Grisan S, Pierasco A, DE Marco F, Musetti R.<br />
Laser microdissection of grapevine leaf phloem infected by stolbur reveals site-specific gene<br />
responses associated to sucrose transport and metabolism.<br />
Plant Cell Environ. 2012 Jul 12. doi: 10.1111/j.1365-3040.2012.02577.x. PubMed<br />
Santi S and Schmidt W<br />
Laser microdissection-assisted analysis of the functional fate of irondeficiency-induced root<br />
hairs in cucumber.<br />
J Exp Bot, 2008, 59,3: 697-704<br />
Sanz MJ, Loarce Y, Ferrer E, Fominaya A.<br />
Use of tyramide-fluorescence in situ hybridization and chromosome microdissection for<br />
ascertaining homology relationships and chromosome linkage group associations in oats.<br />
Cytogenet Genome Res. 2012;136(2):145-56. PubMed<br />
Scanlon MJ, Ohtsu K, Timmermans MC and Schnable PS<br />
Laser microdissection-mediated isolation and in vitro transcriptional amplification of plant<br />
RNA.<br />
Curr Protoc Mol Biol, 2009, Chapter 25: Unit 25A.3<br />
October 2012 113/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Schad M, Mungur R, Fiehn O and Kehr J<br />
Metabolic profiling of laser microdissected vascular bundles of Arabidopsis thaliana.<br />
Plant Methods, 2005, 1: 2<br />
Schad M, Lipton MS, Giavalisco P, Smith RD and Kehr J<br />
Evaluation of two-dimensional electrophoresis and liquid chromatography-tandem mass<br />
spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.<br />
Electrophoresis, 2005, 26,14: 2729-2738<br />
Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R and Rolletschek H<br />
A novel procedure for the quantitative analysis of metabolites, storage products and<br />
transcripts of laser microdissected seed tissues of Brassica napus.<br />
Plant Methods, 2011, in press<br />
Schütze K, Niyaz Y, Stich M and Buchstaller A<br />
Noncontact laser microdissection and catapulting for pure sample capture.<br />
Methods Cell Biol, 2007, 82: 649-673<br />
Srivastava AC, Palanichelvam K, Ma J, Steele J, Blancaflor EB and Tang Y<br />
Collection and analysis of expressed sequence tags derived from laser capture microdissected<br />
Switchgrass (Panicum virgatum L. Alamo) vascular tissues.<br />
Bioenerg Res, 2010, 3: 278-294<br />
Tauris B, Borg S, Gregersen PL and Holm PB<br />
A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection<br />
and gene expression profiling.<br />
J Exp Bot, 2009, 60,4: 1333-1347<br />
Thiel J, Hollmann J, Rutten T, Weber H, Scholz U, Weschke W.<br />
454 transcriptome sequencing suggests a role for two-component signalling in cellularization<br />
and differentiation of barley endosperm transfer cells.<br />
PLoS One. 2012;7(7):e41867. PubMed<br />
Thiel J, Riewe D, Rutten T, Melzer M, Friedel S, Bollenbeck F, Weschke W, Weber H. Differentiation of<br />
endosperm transfer cells of barley: a comprehensive analysis at the micro-scale.<br />
Plant J. 2012 Apr 9. doi: 10.1111/j.1365-313X.2012.05018.x. PubMed<br />
Thiel J, Müller M, Weschke W and Weber H<br />
Amino acid metabolism at the maternal-filial boundary of young barley seeds: a microdissection-based<br />
study.<br />
Planta, 2009, 230,1: 205-213<br />
Thiel J, Weier D, Sreenivasulu N, Strickert M, Weichert N, Melzer M, Czauderna T, Wobus U, Weber H and<br />
Weschke W<br />
Different hormonal regulation of cellular differentiation and function in nucellar projection and<br />
endosperm transfer cells: a microdissection-based transcriptome study of young barley grains.<br />
Plant Physiol, 2008, 148,3: 1436-1452<br />
Voo SS, Grimes HD, Lange BM.<br />
Cell type-specific transcriptome analysis of the soybean leaf paraveinal mesophyll layer.<br />
Plant Mol Biol Rep. 2012, DOI 10.1007/s11105-012-0494-7<br />
Voo SS, Grimes HD, Lange BM.<br />
Assessing the biosynthetic capabilities of secretory glands in Citrus peel.<br />
Plant Physiol. 2012 May;159(1):81-94. PubMed PMID: 22452856.<br />
PubMed<br />
Wu CH, Lee SC and Wang CW<br />
Viral protein targeting to the cortical endoplasmic reticulum is required for cell-cell spreading<br />
in plants.<br />
J Cell Biol, 2011, 193,3: 521-535<br />
Yeats TH, Howe KJ, Matas AJ, Buda GJ, Thannhauser TW and Rose JK<br />
Mining the surface proteome of tomato (Solanum lycopersicum) fruit for proteins associated<br />
with cuticle biogenesis.<br />
J Exp Bot, 2010, 61,13: 3759-3771<br />
October 2012 114/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Yu Y, Lashbrook CC and Hannapel DJ<br />
Tissue integrity and RNA quality of laser microdissected phloem of potato.<br />
Planta, 2007, 226,3: 797-803<br />
Zhang X, Douglas RN, Strable J, Lee M, Buckner B, Janick-Buckner D, Schnable PS, Timmermans MC,<br />
Scanlon M.<br />
PUNCTATE VASCULAR EXPRESSION1 (PVE1) is a novel maize gene required for leaf pattern<br />
formation that functions downstream of the ta-siARF pathway.<br />
Plant Physiol. 2012 PubMed PMID: 22669891. PubMed<br />
Zhang X, Madi S, Borsuk L, Nettleton D, Elshire RJ, Buckner B, Janick-Buckner D, Beck J, Timmermans M,<br />
Schnable PS and Scanlon MJ<br />
Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the<br />
shoot apical meristem.<br />
PLoS Genet, 2007, 3,6: e101<br />
Zhou J, Lee C, Zhong R and Ye ZH<br />
MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during<br />
secondary cell wall formation in Arabidopsis.<br />
Plant Cell, 2009, 21,1: 248-266<br />
1.8 Forensics<br />
Anoruo B, van Oorschot R, Mitchell J and Howells D<br />
Isolating cells from non-sperm cellular mixtures using the PALM microlaser microdissection<br />
system.<br />
Forensic Sci Int, 2007, 173,2-3: 93-96<br />
Axler-DiPerte G, Orans S, Singh A, Caragine T, Prinz M and Budimlja ZM<br />
Comparison and optimization of DNA recovery from sperm vs. epithelial cells using laser<br />
capture microdissection technology and an immunofluorescent staining system.<br />
For Sci Int: Gen Suppl Ser, in press<br />
Benschop CC, Wiebosch DC, Kloosterman AD and Sijen T<br />
Post-coital vaginal sampling with nylon flocked swabs improves DNA typing.<br />
Forensic Sci Int Genet, 2010, 4,2: 115-121<br />
Geigl JB and Speicher MR<br />
Single-cell isolation from cell suspensions and whole genome amplification from single cells to<br />
provide templates for CGH analysis.<br />
Nat Protoc, 2007, 2,12: 3173-3184<br />
Li CX, Han JP, Ren WY, Ji AQ, Xu XL and Hu L<br />
DNA profiling of spermatozoa by laser capture microdissection and low volume-PCR.<br />
PLoS One, 2011, 6,8: e22316<br />
Ludes B, Keyser C<br />
Avoiding errors and pitfalls in evidence sampling for forensic genetics.<br />
Forensic Medicine – From old problems to new challenge, 2012, ISBN: 978-307-262-3, 1-12, Prof. Duarte<br />
Nuno Vieira (Ed.), InTech, Available from: http://www.intechopen.com/books/forensic-medicine-fromold-problems-to-new-challenges/avoiding-errors-and-pitfalls-in-evidence-sampling-for-forensic-genetics<br />
Miyazaki T, Hara M, Ichiki A, Yamamoto Y, Takada A, Kido A, Nodera M, Yanagisawa H, Suzuki H and<br />
Saito K<br />
An efficient novel method for analyzing STR loci from a single sperm captured by laser<br />
microdissection.<br />
Forensic Sci Int Genetics Suppl, 2008, 437-438<br />
Murray C, McAlister C and Elliott K<br />
Identification and isolation of male cells using fluorescence in situ hybridisation and laser<br />
microdissection, for use in the investigation of sexual assault.<br />
Forensic Sci Int Genet, 2007, 1,3-4: 247-252<br />
October 2012 115/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Novotný J and Hadrys T<br />
Bringing laser microdissection and on-chip PCR together.<br />
Promega, 2008, profiles in DNA: 9-11<br />
Schulz MM, Buschner M, Leidig R, Wehner HD, Fritz P, Häbig K, Bonin M, Schütz M, Shiozawa T and<br />
Wehner F<br />
A new approach to the investigation of sexual offenses-cytoskeleton analysis reveals the<br />
origin of cells found on forensic swabs.<br />
J Forensic Sci, 2010, 55,2: 492-498<br />
Seidl S, Burgemeister R, Hausmann R and Betz P<br />
Contact-free isolation of sperm and epithelial cells by Laser Microdissection and Pressure<br />
Catapulting.<br />
Forensic Sci Med Pathol, 2005, V1-2: 153-158<br />
Van Oorschot RA, Ballantyne KN and Mitchell RJ<br />
Forensic trace DNA: a review.<br />
Investig Genet, 2010, 1,1:14<br />
Vandewoestyne M, Van Nieuwerburgh F, Van Hoofstat D and Deforce D<br />
Evaluation of three DNA extraction protocols for forensic STR typing after laser capture<br />
microdissection.<br />
Forensic Sci Int Genet, 2011, in press<br />
Vandewoestyne M and Deforce D<br />
Laser capture microdissection in forensic research: a review.<br />
Int J Legal Med, 2010, 124,6: 513-521<br />
Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />
Automatic detection of spermatozoa for laser capture microdissection.<br />
Int J Legal Med, 2009, 123,2: 169-175<br />
Vandewoestyne M, Van Hoofstat D, Van Nieuwerburgh F and Deforce D<br />
Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and<br />
laser microdissection for STR profiling of male cells in male/female mixtures.<br />
Int J Legal Med, 2009, 123,5: 441-447<br />
Weiler NE, Matai AS and Sijen T<br />
Extended PCR conditions to reduce drop-out frequencies in low template STR typing including<br />
unequal mixtures.<br />
Forensic Sci Int Genet, 2012, 6,1: 102-107<br />
1.9 Miscellaneous<br />
de Bekker C, van Veluw GJ, Vinck A, Wiebenga LA and Wösten HA<br />
Heterogeneity of Aspergillus niger microcolonies in liquid shaken cultures.<br />
Appl Environ Microbiol, 2011, 77,4: 1263-1267<br />
Bobryshev YV, Killingsworth MC, Lord RS and Grabs AJ<br />
Matrix vesicles in the fibrous cap of atherosclerotic plaque: Possible contribution to plaque<br />
rupture.<br />
J Cell Mol Med, 2008, 12,5B: 2073-2082<br />
Bobryshev YV<br />
Intracellular localization of oxidized low-density lipoproteins in atherosclerotic plaque cells<br />
revealed by electron microscopy combined with laser capture microdissection.<br />
J Histochem Cytochem, 2005, 53,6: 793-797<br />
Davies RJ, Koenig C, Burghammer M and Riekel C<br />
On-axis microbeam wide- and small-angle scattering experiments of a sectioned poly(pphenylene<br />
terephthalamide) fiber.<br />
Appl Phys, 2008, 92: 101903-1-101903-3<br />
October 2012 116/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Fuhr G, Reichle C, Müller T, Kahlke K, Schütze K and Stuke M<br />
Processing of micro-particles by UV laser irradiation in a field cage.<br />
Applied Physics, 1999, A 69: 612-616<br />
Gloess S, Grossart HP, Allgaier M, Ratering S and Hupfer M<br />
Use of laser microdissection for phylogenetic characterization of polyphosphate-accumulating<br />
bacteria.<br />
Appl Environ Microbiol, 2008, 74,13: 4231-4235<br />
Greulich KO<br />
Lasermikrotechniken in der Biotechnologie.<br />
Spektrum der Wissenschaft-Dossier. Laser in neuen Anwendungen 1998: 28-31<br />
Huang C, Lucas B, Vervaet C, Braeckmans K, van Calenbergh S, Karalic I, Vandewoestyne M, Deforce D,<br />
Demeester J and de Smedt SC<br />
Unbreakable codes in electrospun fibers: digitally encoded polymers to stop medicine<br />
counterfeiting.<br />
Adv Mater, 2010, 22,24: 2657-2662<br />
Kang Y, Norris MH, Zarzycki-Siek J, Nierman WC, Donachie SP and Hoang TT<br />
Transcript amplification from single bacterium for transcriptome analysis.<br />
Genome Res, 2011, 21,6: 925-935<br />
Max E, Häfner W, Bartels FW, Sugiharto A, Wood C and Fery A<br />
A novel AFM based method for force measurements between individual hair strands.<br />
Ultramicroscopy, 2010, 110,4: 320-324<br />
Niyaz Y and Sägmüller B<br />
Non-contact Laser Microdissection and Pressure Catapulting: Automation via object-oriented<br />
image processing.<br />
Medical Laser Application, 2005, 20: 223-232<br />
Pérez-Osorio AC, Williamson KS and Franklin MJ<br />
Heterogeneous rpoS and rhlR mRNA levels and 16S rRNA/rDNA (rRNA gene) ratios within<br />
Pseudomonas aeruginosa biofilms, sampled by laser capture microdissection.<br />
J Bacteriol, 2010, 192,12: 2991-3000<br />
Schindler M<br />
Select, microdissect, and eject.<br />
Nature Biotechn, 1998, 16,8: 719-720<br />
Schneider-Stock R<br />
Laser microdissection in pathology – research and practice.<br />
Pathol Res Pract, 2003, 199: 353<br />
Seidel R, Gourrier A, Burghammer M, Riekel C, Jeronimidis G and Paris O<br />
Mapping fibre orientation in complex-shaped biological systems with micrometre resolution by<br />
scanning X-ray microdiffraction.<br />
Micron, 2008, 39,2: 198-205<br />
Tian XF, Fan XG, Zhang Y, Huang Y, Dai H and Ying RS<br />
Procuration and identification of bacteria in paraffin-embedded liver tissues of hepatocellular<br />
carcinoma by laser-assisted microdissection technique.<br />
APMIS, 2008, 116,1: 10-15<br />
Williamson KS, Richards LA, Perez-Osorio AC, Pitts B, McInnerney K, Stewart PS, Franklin MJ.<br />
Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome<br />
hibernation factors in the antibiotic tolerant subpopulation and hypoxia induced stress<br />
response in the metabolically active population.<br />
J Bacteriol. 2012 Feb 17. [Epub ahead of print] PubMed<br />
Zheng Z<br />
Molecular epidemiologic studies on Helicobacter pylori infection and stomach cancer risk.<br />
Thesis, 2011: 1-58<br />
October 2012 117/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
2 PALM MicroTweezers<br />
Beck P and Huber R<br />
Detection of cell viability in cultures of hyperthermophiles.<br />
FEMS Microbiological Letters, 1997, 147: 11-14<br />
Buchholz T and Clement-Sengewald A<br />
Möglichkeiten und Grenzen der Polkörperchendiagnostik.<br />
Reproduktionsmedizin, 2000, 16: 343-353<br />
Clement-Sengewald A, Buchholz T and Schütze K, Berg U and Berg FD<br />
Noncontact, laser-mediated extraction of polar bodies for prefertilization genetic diagnosis.<br />
J Assist Reprod Gen, 2002, 19,4: 183-194<br />
Clement-Sengewald A, Buchholz T and Schütze K<br />
Laser microdissection as a new approach to prefertilization genetic diagnosis.<br />
Pathobiology, 2000, 68: 232-236<br />
Clement-Sengewald A, Schütze K, Sandow S, Nevinny C and Pösl H<br />
PALM Robot-MicroBeam for laser-assisted fertilization, embryo hatching and single-cell<br />
prenatal diagnosis.<br />
Wyss P, Tadir Y, Tromberg BJ, Haller U (eds): Photomedicine in Gynecology and Reproduction. Basel,<br />
Karger, 2000: 340-351<br />
Clement-Sengewald A and Schütze K<br />
Animal experimentation. Fertilization of bovine oocytes induced solely with combined laser<br />
microbeam and optical tweezers.<br />
J Assist Reprod Gen, 1996, 13: 259-265<br />
Connolly C<br />
Laser ablation reveals sexual attraction mechanism in flowers.<br />
Biophot Int, 2001, 8,9: 61-63<br />
Fuhr G and Reichle C<br />
Living cells in opto-electrical cages.<br />
Trends in Analyt Chem, 2000, 19: 402-409<br />
Fuhr G and Schnelle T<br />
Dielektrische Mikrofeldkäfige.<br />
Physikalische Blätter, 2000, 57, Nr. 1<br />
Fuhr G, Reichle C, Müller T, Kahlke K, Schütze K and Stuke M<br />
Processing of micro-particles by UV laser irradiation in a field cage.<br />
Appl Phys, 1999, A 69: 612-616<br />
Huber R<br />
Die Laserpinzette als Basis für Einzelzellkultivierungen.<br />
Biospektrum, 1999, 4: 289-291<br />
Huber R, Burggraf S, Mayer T, Barns SM, Rossnagel P and Stetter KO<br />
Isolation of a hyperthermophilic archaeum predicted by in situ RNA analysis.<br />
Nature, 1995, 376: 57-58<br />
Jiménez N, Post JA.<br />
A Novel Approach for Intracellular 3D Immuno-Labeling for Electron Tomography.<br />
Traffic. 2012 Jul;13(7):926-33. doi: 10.1111/j.1600-0854.2012.01363.x. PubMed<br />
Kumar S, Kumar R, Jindal VK and Bharadwaj LM<br />
Immobilization of single walled carbon nanotubes on glass surface.<br />
Materials Letters, 2008, 62: 741-731<br />
Kuroiwa T, Ishibashi K, Takano H, Higashiyama T, Sasaki N, Nishimura Y and Matsunaga S<br />
Optical isolation of individual mitochondria of Physarum polycephalum for PCR analysis.<br />
Protoplasma, 1996, 194: 275-279<br />
October 2012 118/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH
<strong>Carl</strong> <strong>Zeiss</strong> Microscopy<br />
Laser Microdissection<br />
Nishimura Y, Misumi O, Matsunaga S, Higashiyama T, Yokota A and Kuroiwa T<br />
The active digestion of uniparental chloroplast DNA in a single zygote of Chlamydomonas<br />
reinhardtii is revealed by using the optical tweezer.<br />
PNAS USA, 1999, 96,22: 12577-12582<br />
Pflugradt R, Schmidt U, Landenberger B, Sänger T and Lutz-Bonengel S<br />
A novel and effective separation method for single mitochondria analysis.<br />
Mitochondrion, 2011, 11,2: 308-314<br />
Piggee C<br />
Optical tweezers: not just for physicists anymore.<br />
Anal Chem, 2009, 81,1: 16-19<br />
Reichle C, Sparbier K, Müller T, Schnelle T, Walden P and Fuhr G<br />
Combined laser tweezers and dielectric field cage for the analysis of receptor-ligand interactions<br />
on single cells.<br />
Electrophoresis, 2001, 22: 272-282<br />
Reichle C, Schnelle T, Müller T, Leya T and Fuhr G<br />
A new microsystem for automated electrorotation measurements using laser tweezers.<br />
Biochem Biophys Acta, 2000, 1459: 218-229<br />
Schnelle T, Müller T, Reichle C and Fuhr G<br />
Combined dielectrophoretic field cages and laser tweezers for electrorotation.<br />
Appl Phys, 2000, B70: 267-274<br />
Schütze K, Becker I, Becker K-F, Thalhammer S, Stark R, Heckl WM, Böhm M and Pösl H<br />
Cut out or poke in - the key to the world of single genes: laser micromanipulation as a valuable<br />
tool on the look-out for the origin of disease.<br />
Gen Anal, 1997, 14: 1-8<br />
Schütze K, Clement-Sengewald A and Berg FD<br />
Non-contact laser micromanipulation of gametes and embryos. Part I: The UV-laser<br />
microbeam. Part II: IR-optical tweezers trap.<br />
Hum Reprod Update, 1995, 1,1<br />
Schütze K and Clement-Sengewald A<br />
Catch and move - cut or fuse.<br />
Nature, 1994, 368: 667-670<br />
Schütze K<br />
Laser zona drilling and sperm transfer into the perivitelline space.<br />
Hum Reprod, 1993, 8,1: 390<br />
Thalhammer S, Lahr G, Clement-Sengewald A, Heckl WM, Burgemeister R and Schütze K<br />
Laser microtools in cell biology and molecular medicine.<br />
Laser Physics, 2003, 13: 681-691<br />
October 2012 119/119 <strong>Carl</strong> <strong>Zeiss</strong> Microscopy GmbH