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Basic concepts of population genetics - Bioversity International

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Consequences … (continued)<br />

A bottleneck develops when the <strong>population</strong> size<br />

drops sharply<br />

The founder effect occurs when a few<br />

individuals colonize and become established in<br />

a new environment<br />

p = 0.5 (frequency <strong>of</strong> A 1 )<br />

q = 0.5 (frequency <strong>of</strong> A 2 )<br />

N<br />

A1A1 A1A1 A1A2 A1A1 A1A1 A1A2 A1A1 A2A2 A2A2 A2A2 A2A2 A1A2 A2A2 A1A1 A2A2 A2A2 A1A2 A1A1 A1A2 A1A2 A1A1 A1A2 A1A2 A2A2 A 2 A 2<br />

Bottleneck<br />

Copyright: IPGRI and Cornell University, 2003 Population <strong>genetics</strong> 41<br />

41<br />

A 2 A 2<br />

p = 0.0 (frequency <strong>of</strong> A 1 )<br />

q = 1.0 (frequency <strong>of</strong> A 2 )<br />

A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 A2A2 Small <strong>population</strong>s are highly vulnerable to extinction because the surviving sample<br />

may not be representative <strong>of</strong> the pre-crash genepool.<br />

Both effects depend on the number <strong>of</strong> survivors (or colonizers) and the rate <strong>of</strong><br />

<strong>population</strong> growth.<br />

The graphic in the slide shows a bottleneck effect. To the left is a <strong>population</strong> in<br />

Hardy-Weinberg equilibrium with allele frequencies <strong>of</strong> 0.5. If a sudden reduction<br />

occurs, then the original size restored, the result may be a loss <strong>of</strong> alleles and the<br />

fixation <strong>of</strong> others. In the example (right), only A 2 A 2 survived and allele A 1 was lost.<br />

time

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