PASA Pipeline - Rice Genome Annotation Project
PASA Pipeline - Rice Genome Annotation Project
PASA Pipeline - Rice Genome Annotation Project
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<strong>Annotation</strong> Comparison<br />
The <strong>PASA</strong> <strong>Pipeline</strong> [Capabilities]<br />
Then (NAR, 2003) :<br />
Update gene structures:<br />
- Changes in introns and exons<br />
- UTR additions<br />
Model additional gene structures<br />
- Alternative splicing isoforms<br />
- New gene models<br />
Now, <strong>PASA</strong>-2 (above plus following enhancements) :<br />
Gene merging<br />
Gene splitting<br />
Antisense classification<br />
Polyadenylation sites
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