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PASA Pipeline - Rice Genome Annotation Project

PASA Pipeline - Rice Genome Annotation Project

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Enhancements: Gene<br />

Existing gene<br />

Splitting<br />

FL-assemblies<br />

<br />

Requires<br />

multiple FL-assemblies from distinct sub clusters map to the<br />

same gene<br />

have the same transcribed orientation,<br />

<br />

and the min and max of the new ORFs must cover at least<br />

MIN_PERCENT_OVERLAP_GENE_REPLACE of the gene to<br />

be split.

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