PASA Pipeline - Rice Genome Annotation Project
PASA Pipeline - Rice Genome Annotation Project
PASA Pipeline - Rice Genome Annotation Project
You also want an ePaper? Increase the reach of your titles
YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.
Transcript Sequences<br />
Seqclean<br />
Align to <strong>Genome</strong><br />
Cluster overlapping alignments<br />
<strong>PASA</strong> <strong>Pipeline</strong><br />
Seqclean (TIGR Gene Indices)<br />
•vector removal<br />
•poly-A identification, stripping<br />
•trash low quality seqs<br />
<strong>PASA</strong> alignment assembly<br />
subCluster <strong>PASA</strong> assemblies<br />
Compare to annotation<br />
Update annotation