Alignment and Atlases

-103-• Realtime motion correction can easily be setup if DICOM images are made available ondisk as the scanner is running. • The script demo.realtime present in the AFNI_data1/EPI_manyruns directory demonstratesthe usage:#!/bin/tcsh# demo real-time data acquisition and motion detection with afni# use environment variables in lieu of running the RT Options pluginsetenv AFNI_REALTIME_Registration 3D:_realtimesetenv AFNI_REALTIME_Graph Realtimeif ( ! -d afni ) mkdir afnicd afniafni -rt &sleep 5cd ..echo ready to run Dimonecho -n press enter to proceed...set stuff = $