eman - NCMI

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Evaluate Data●●cd ~/data/<strong>eman</strong>.demo/samples/boxerls●●e2scannereval.py jj0880f.mrc --norme2display jj0880f.eval.mrcalso●●box out particles thenctfit jj5339.f.hed
Canonical EMAN Refinement●●●●●●●●Image AcquisitionParticle Picking– boxer, batchboxer, e2boxer.py, helixboxer2D AnalysisSymmetry/Preliminary ModelDetermine CTF ParametersHigh Resolution RefinementPostprocessingDynamics
Page 1 and 2: TutorialSession
Page 3 and 4: EMAN2 Documentation●●●●●A
Page 5 and 6: GUI Programs● eman● v2● boxer
Page 7: Canonical EMAN Refinement●●●
Page 11 and 12: Particle Picking (Boxing)●●cd ~
Page 13 and 14: Canonical EMAN Refinement●●●
Page 17 and 18: First Preliminary ModelLook at:●
Page 19 and 20: Basic Image Processing● iminfo [
Page 21 and 22: CTF Correction EMANInitial3D Mod
Page 23 and 24: CTF Parameter Determination●●fi
Page 27 and 28: Refine Options●Projection:mask=pr
Page 29 and 30: Refine OptionsREQUIRED:●●●
Page 31 and 32: Refine OptionsOPTIONAL:●●filt3d
Page 33 and 34: Refine OptionsTYPICAL (not required
Page 39 and 40: 2D Analysis Step 2(particle extra
Page 41 and 42: multirefine●●●●No demo data
Page 43 and 44: multirefine●●When multirefine c
Page 45: Generating a Hybrid Structure Facto

eman - NCMI

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