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What documentation exists for R?

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Chapter 5: R Add-On Packages 23<br />

BACCO Bayesian Analysis of Computer Code Output. Contains approximator, calibrator,<br />

and emulator, <strong>for</strong> Bayesian prediction of complex computer codes, calibration<br />

of computer models, and emulation of computer programs, respectively.<br />

BHH2 Functions and data sets reproducing some examples in “Statistics <strong>for</strong> Experimenters<br />

II” by G. E. P. Box, J. S. Hunter, and W. C. Hunter, 2005, John Wiley<br />

and Sons.<br />

BMA Bayesian Model Averaging <strong>for</strong> linear models, generalizable linear models and<br />

survival models (Cox regression).<br />

BRugs OpenBUGS and its R interface BRugs.<br />

BayesTree Bayesian methods <strong>for</strong> tree based models.<br />

BayesValidate<br />

Bayesian software validation using posterior quantiles.<br />

Bhat Functions <strong>for</strong> general likelihood exploration (MLE, MCMC, CIs).<br />

BiasedUrn<br />

Biased urn model distributions.<br />

Biodem A number of functions <strong>for</strong> biodemographycal analysis.<br />

Bolstad Functions and data sets <strong>for</strong> the book “Introduction to Bayesian Statistics” by<br />

W. M. Bolstad, 2004, John Wiley and Sons.<br />

BradleyTerry<br />

Specify and fit the Bradley-Terry model and structured versions.<br />

BSDA Data sets <strong>for</strong> the book “Basic Statistics and Data Analysis” by L. J. Kitchens,<br />

2003, Duxbury.<br />

BsMD Bayes screening and model discrimination follow-up designs.<br />

CDNmoney<br />

Components of Canadian monetary aggregates.<br />

CGIwithR Facilities <strong>for</strong> the use of R to write CGI scripts.<br />

CTFS The CTFS large plot <strong>for</strong>est dynamics analyses.<br />

CVThresh Level-dependent Cross-Validation Thresholding.<br />

CircStats Circular Statistics, from “Topics in Circular Statistics” by S. Rao Jammalamadaka<br />

and A. SenGupta, 2001, World Scientific.<br />

CoCo Graphical modeling <strong>for</strong> contingency tables using CoCo.<br />

CompetingRiskFrailty<br />

Competing risk model with frailties <strong>for</strong> right censored survival data.<br />

CreditMetrics<br />

Functions <strong>for</strong> calculating the CreditMetrics risk model.<br />

DAAG Various data sets used in examples and exercises in “Data Analysis and Graphics<br />

Using R” by John H. Maindonald and W. John Brown, 2003.

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