What documentation exists for R?

Chapter 5: R Add-On Packages 35
bootstrap Software (bootstrap, cross-validation, jackknife), data and errata for the book
“An Introduction to the Bootstrap” by B. Efron and R. Tibshirani, 1993, Chapman
and Hall.
bqtl QTL mapping toolkit for inbred crosses and recombinant inbred lines. Includes
maximum likelihood and Bayesian tools.
brainwaver
Basic wavelet analysis of multivariate time series with a vizualisation and
parametrization using graph theory.
brlr Bias-reduced logistic regression: fits logistic regression models by maximum
penalized likelihood.
butler Unit testing, profiling and benchmarking for R.
caMassClass
Processing and Classification of protein mass spectra (SELDI) data.
caTools Miscellaneous utility functions, including reading/writing ENVI binary files, a
LogitBoost classifier, and a base64 encoder/decoder.
cacheSweave
Tools for caching Sweave computations.
cairoDevice
Loadable CAIRO/GTK device driver.
calibrate Calibration of biplot axes.
car Companion to Applied Regression, containing functions for applied regession,
linear models, and generalized linear models, with an emphasis on regression
diagnostics, particularly graphical diagnostic methods.
cat Analysis of categorical-variable datasets with missing values.
catspec Special models for categorical variables.
cba Clustering for Business Analytics, including implementations of Proximus and
Rock.
cclust Convex clustering methods, including k-means algorithm, on-line update algorithm
(Hard Competitive Learning) and Neural Gas algorithm (Soft Competitive
Learning) and calculation of several indexes for finding the number of
clusters in a data set.
cfa Analysis of configuration frequencies.
cgh Analysis of microarray comparative genome hybridisation data using the Smith-
Waterman algorithm.
chplot Augmented convex hull plots: informative and nice plots for grouped bivariate
data.
changeLOS
Change in length of hospital stay (LOS).
chemCal Calibration functions for analytical chemistry.