Nitrosopumilus maritimus genome reveals unique - de la Torre ...
Nitrosopumilus maritimus genome reveals unique - de la Torre ...
Nitrosopumilus maritimus genome reveals unique - de la Torre ...
Create successful ePaper yourself
Turn your PDF publications into a flip-book with our unique Google optimized e-Paper software.
Supplemental Table 5: Predicted distribution pattern of proteins diagnostic for major archaeal phy<strong>la</strong>.<br />
Protein COG N. <strong>maritimus</strong> C. symbiosium Euryarchaeota Crenaracheota<br />
Cell division protein FtsZ COG0206 YP_001582596 YP_875876 + -<br />
Predicted ATP-<strong>de</strong>pen<strong>de</strong>nt protease COG1067 - - + -<br />
ERCC4-type nuclease COG1111 YP_001582278 YP_876110 + -<br />
MiaB family, Radical SAM enzyme COG1244 - - + -<br />
Archaeal DNA polymerase D, small<br />
subunit<br />
COG1311 YP_001581340 YP_876754 + -<br />
Archaeal DNA polymerase D, <strong>la</strong>rge<br />
subunit<br />
COG1933 YP_001583128 YP_876741 + -<br />
Predicted membrane protein COG1422 YP_001581738 YP_875263 + -<br />
Uncharacterised MobA-re<strong>la</strong>ted protein COG1873 -/? 1 -/? 1 + -<br />
Uncharacterised conserved protein COG2450 YP_001583060 YP_876421 + -<br />
Predicted membrane protein COG4243 - - - +<br />
ribosomal protein L13E COG4352 - - - +<br />
Uncharacterised protein conserved in<br />
archaea<br />
COG4755 - - - +<br />
Uncharacterised conserved protein COG4353 - - - +<br />
Uncharacterised protein conserved in<br />
archaea<br />
COG4879 - - - +<br />
Predicted aminopeptidase, Iap family COG4882 - - - +<br />
Uncharacterized Zn ribbon-containing<br />
protein<br />
COG4888 - - - +<br />
Predicted metallopeptidase COG4900 - - - +<br />
Ribosomal protein S25 COG4901<br />
-/?<br />
(YP_001582264)<br />
-/? (YP_875201) - +<br />
Predicted nucleotidyltransferase COG4914 - - - +<br />
Ribosomal protein S30 COG4919 YP_001582721 YP_875487 - +<br />
Predicted membrane protein COG4920 - - - +<br />
Uncharacterised protein conserved in<br />
archaea<br />
COG5399 - - - +<br />
Uncharacterized conserved protein<br />
containing a coiled-coil<br />
COG5493 - - - +<br />
Predicted thioredoxin/glutaredoxin COG5494 - - - +<br />
EMAP domain RNA-binding protein COG0073 YP_001581931 - + +<br />
Phosphoribosy<strong>la</strong>nthrani<strong>la</strong>te isomerase COG0135 - - + +<br />
Molybdopterin biosynthesis enzyme COG0303 - - + +<br />
Hydrogenase maturation factor COG0309 - - + +<br />
Molyb<strong>de</strong>num cofactor biosynthesis<br />
enzyme<br />
COG0315 - - + +<br />
Dihydrodipicolinate synthase/Nacetylneuraminate<br />
lyase<br />
COG0329 - - + +<br />
Membrane protease subunit,<br />
stomatin/prohibitin homolog<br />
COG0330 -:? - + +<br />
NAD(FAD)-<strong>de</strong>pen<strong>de</strong>nt <strong>de</strong>hydrogenase COG0446 -/? - + +<br />
Molybdopterin biosynthesis enzyme COG0521 - - + +<br />
Topoisomerase IA COG0550 - - + +<br />
CDP-diglyceri<strong>de</strong> synthetase COG0575 - - + +<br />
Methionine synthase II (coba<strong>la</strong>minin<strong>de</strong>pen<strong>de</strong>nt)<br />
COG0620 - - + +<br />
Deoxycytidine <strong>de</strong>aminase COG0717 - - + +<br />
ABC-type molybdate transport system,<br />
perip<strong>la</strong>smic component<br />
COG0725 - - + +<br />
Molybdopterin-guanine dinucleoti<strong>de</strong><br />
biosynthesis protein A<br />
COG0746 - - + +<br />
Predicted transcriptional regu<strong>la</strong>tor COG1395 - - + +<br />
NMD protein affecting ribosome<br />
stability and mRNA <strong>de</strong>cay<br />
COG1499 - - + +
Change language