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Chem 155 <strong>Final</strong> review topics and questions:<br />

=================================================================<br />

Part I. (optional) outline<br />

================================================================<br />

1. Statistics, mean, std deviation, propagation of error, confidence limits.<br />

2. Sensitivity, limit of detection C MIN , limit of linearity, standard additions, internal<br />

standards. Calculation of concentration, error in concentration, C MIN .<br />

3. Experiment design – calibration standard and sample prep.<br />

4. Properties of electromagnetic radiation: , , cm -1 , refractive index, diffraction,<br />

photoelectric effect.<br />

5. The electromagnetic spectrum – wavelengths, energies and spectroscopically<br />

observable physical processes of interest to chemistry and physics<br />

6. Vibrational and electronic spectroscopy<br />

a. atoms versus molecules<br />

b. absorbance versus fluorescence spectroscopy<br />

c. calculation of band positions in nm, cm -1<br />

7. Monochromators – Czerny-Turner calculations: , D -1 , EFF, R, F<br />

8. Lasers – concepts: absorption, spontaneous emission, radiative decay,<br />

nonradiative decay, stimulated emission, gain; operating principles of 3-level, 4-<br />

level lasers, eximer lasers.<br />

9. Phototube, photomultiplier tube, photodiode and CCD detectors.<br />

a. Photoelectric detectors<br />

i. photoelectric effect – work function, operating ranges<br />

ii. gain equations<br />

iii. design, relative speed, relative sensitivity<br />

b. Semiconductor detectors<br />

i. Materials, dopants, semiconduction, holes and electrons, PN<br />

junctions, CCD detectors.<br />

ii. Description of operation<br />

iii. Design, relative speed, relative sensitivity<br />

=================================================================<br />

Part II. outline<br />

10. Atomic absorption spectrometry<br />

a. Principles of FAAS – where selectivity and sensitivity arise<br />

b. Spectrometer design<br />

c. Atomization processes<br />

d. Sensitvitiy and atomization: protecting agents, releasing agents, radiation<br />

buffers<br />

e. Bandwidth considerations and calibration curve linearity<br />

11. Atomic emission spectrometry<br />

f. ICP – principles<br />

i. Ar plasma<br />

ii. Inductive coupling<br />

iii. torch design<br />

g. Ar-plasmas versus flames as atomizers<br />

h. Bandwidth considerations and noise


Chem 155 <strong>Final</strong> review topics and questions:<br />

i. Stability considerations, matrix effects and internal standards<br />

j. Monochromators, simultaneous multielement detection, Echelle designs<br />

and CCD array detection<br />

12. UV-Vis absorbance spectrometry<br />

k. Beer’s law<br />

l. Molecular cross sections<br />

m. Non-Beer’s law behavior<br />

13. FTIR<br />

n. A interferometry<br />

o. IR radiation and vibrational modes<br />

p. Sampling methods: ATR, transmission mode<br />

14. Raman<br />

q. Dynamic polarizability<br />

r. Virtual States<br />

s. Stokes / Anti-stokes<br />

t. Calculations<br />

15. Mass spectrometry<br />

u. Ion source<br />

i. EI<br />

ii. ESI<br />

iii. CI<br />

iv. MALDI<br />

v. M/Z origins, isotopomers<br />

w. Analyzer types<br />

i. Resolution<br />

ii. Mass range<br />

iii. Cost<br />

iv. Pulsed / cont.<br />

x. Fragmentation patterns<br />

16. Separations<br />

y. Vocabulary<br />

z. Principles – reverse-phase and normal-phase HPLC, separation versus<br />

resolution<br />

aa. VanDeempter equation<br />

bb. Factors that determine ‘H’<br />

cc. General elution problem / solution


Chem 155 <strong>Final</strong> review topics and questions:<br />

=================================================================<br />

Part I. practice problems<br />

================================================================<br />

The following 5 measurements of light power were made:<br />

1000, 1010, 1015, 1008.<br />

Calculate the mean, standard deviation, and 95% confidence interval for this<br />

population.<br />

1000 1010 1015 1008<br />

4<br />

1008.25<br />

( 1008.25 1000) 2 ( 1008.25 1010) 2 ( 1008.25 1015) 2 ( 1008.25 1008) 2<br />

4 1<br />

6.2<br />

If concentration is related to light power by the relation: C = k*P, and k = 0.0010 +/-<br />

0.0001 and P = 9.5+/-0.2, what is the mean and standard deviation in the<br />

concentration (Error propagation)<br />

k 0.001 s k 0.0001 P 9.5 s P 0.2<br />

C k P s C C<br />

s k<br />

k<br />

2<br />

s P<br />

P<br />

2<br />

C 0.0095<br />

s C 0.0010<br />

Experimental Design<br />

A sample of soil contains about 1 to 5 grams of arsenic per 1000 Kg<br />

(metric ton).<br />

a) What approximate As conc. in ppm would result from dissolving 1.00g of soil in<br />

HF/ HNO3, filtering, and diluting to 100.0 ml<br />

2.5 g As / 1000 Kg soil * 1 Kg soil / 1000 g soil * 1.00 g soil sample = 2.5x10 -6 g As<br />

2.5*10 -6 g / 100 mL * 1000 mL / L * 10 6 g / g = 25 g / L => 25 ppb => 0.025 ppm<br />

b) Your ICP instrument can measure As in the 0.01 to 10 ppm range. What would<br />

be an appropriate range of concentrations in which to prepare standards for the<br />

above experiment<br />

1 – 200 ppb seems reasonable<br />

Low std must be > 25 ppb


Chem 155 <strong>Final</strong> review topics and questions:<br />

c) Describe how you might prepare a 0.500 ppm calibration standard from a 1000.0<br />

ppm standard solution.<br />

a. Pipet 1.00 mL and dilute to 100.0 mL 1000 ppm 10 ppm<br />

b. Pipet 1.00 mL and dilute to 20.0 mL 10 ppm * 1/20 0.500 ppm<br />

List 3 desired properties of a light detector.<br />

a. High sensitivity<br />

b. Low noise<br />

c. High quantum efficiency<br />

d. High speed<br />

2. Sketch a photomultiplier tube and label the important parts<br />

a. See notes<br />

3. How many dynodes are needed for a PMT to produce at least 1,000,000<br />

electrons per photoelectron Assume that the secondary electron yield is 4.<br />

n<br />

10 6 4 n ln ln 10 6 2.303log 10 6<br />

n<br />

( 2.3036)<br />

ln( 4)<br />

n 9.968 10 dynodes 4 10 1.049 10 6<br />

4. Is it possible to detect near infrared radiation (wavelength = 1500 nm) with a<br />

photomultiplier tube using a Na photocathode The work function of Na is 2.75<br />

eV.<br />

h 6.62610 34 J s c 3.0010 8 m s<br />

h c 1eV<br />

E<br />

150010 9 m 1.60210 19 J<br />

150010 9 m eV 1.60210 19 J<br />

E 0.827eV Since E the photoelectric effect<br />

is not promising for detection!


Chem 155 <strong>Final</strong> review topics and questions:<br />

5. By what basic mechanism does the photodiode produce an electric current when<br />

light strikes it<br />

The photodiode is reverse-biased. This means that without light, no current flows. The<br />

PN junction of the photodiode is exposed to light. When light strikes the PN junction it<br />

may create electron-hole pairs. The bias will then sweep apart the electron-hole pairs<br />

and convert the light into an electrical current.<br />

6. What happens at a p-n junction when a reverse-bias is applied Draw a diagram<br />

to support your answer. Why are photodiodes operated in reverse bias<br />

+<br />

+<br />

+<br />

+<br />

+<br />

-<br />

-<br />

-<br />

-<br />

The photon (red arrow) strikes the photodiode in the depletion region and an<br />

electron-hole pair is generated. The electron and hole (red circles) are swept<br />

apart by an electric field. In reverse bias, the diode produces zero current in the<br />

dark. Low or zero dark current is a good quality in a photo-detector.<br />

7. What is the maximum gain of a photodiode transducer Is this better than a<br />

phototube<br />

Photodiode max gain = 1 = equal to the phototube max gain.


Chem 155 <strong>Final</strong> review topics and questions:<br />

8. Draw a diagram of the photosensitive element in a charge-coupled-device array<br />

detector and illustrate what happens when light strikes this detector.<br />

- 1 0 V<br />

- 1 0 V<br />

- 1 0 V<br />

A l c o n t a c t<br />

S i O 2<br />

n - S i<br />

-<br />

-<br />

- -<br />

-<br />

-<br />

-<br />

- + - +<br />

-<br />

-<br />

- -<br />

- -<br />

-<br />

1. e- are repelled<br />

from Al contact<br />

2. h strikes<br />

depletion region<br />

3. h+ accumulate at<br />

Al contact – charge<br />

stored here is a<br />

measure of light!<br />

9. Draw a simple diagram placing the following elements in the proper order for (A)<br />

an absorbance spectrometer and (B) a fluorescence spectrometer.<br />

Detector<br />

Source<br />

Signal Processor<br />

Wavelength Selector<br />

Sample Holder<br />

A<br />

source Sample holder Wavelength sel detector Signal processor<br />

B<br />

source<br />

10. How are light power for sample and blank and sample concentration related to<br />

analyte concentration in (A) fluorescence and (B) absorbance spectrometry<br />

A fluor: P = C*k<br />

Wavelength sel detector Signal processor<br />

Sample holder<br />

The only difference is that the signal is collected<br />

at right angles to source beam!<br />

B abs: P = P0 x10-A<br />

11. Give an example of a material that is transparent in (A) the UV-Visible and Near<br />

IR, and (B) the IR regions of the EM spectrum.


Chem 155 <strong>Final</strong> review topics and questions:<br />

A silica – SiO 2 (other acceptable: sapphire, calcium fluoride)<br />

B zinc selenide – ZnSe (also germanium, silicon and potassium bromide)<br />

12. Give an example of a light source that is operative in (A) the UV-Visible and Near<br />

IR, and (B) the IR regions of the EM spectrum. For each, give an example of a<br />

line source and a continuum source.<br />

A<br />

UV, VIS or NIR line source hollow cathode lamp or laser<br />

UV, VIS or NIR continuum source tungsten halogen or Xe-arc lamp<br />

B<br />

- IR continuum source Nernst glower<br />

13. Draw a simple schematic of a laser and label the important parts.<br />

14. What processes are involved in loss and gain in a laser light cavity. Name them<br />

and give a short equation showing photons and states to indicate your answer.<br />

15. Draw an energy level diagram for a 4-level laser and indicate the levels involved<br />

in the lasing transition.<br />

16. What must be the case if laser radiation transiting the laser cavity is to be<br />

amplified by stimulated emission rather than attenuated


Chem 155 <strong>Final</strong> review topics and questions:<br />

17. Why is a 4-level laser more easily pumped than a 3-level one<br />

18. Draw an energy level diagram for an eximer laser. Indicate what molecules and<br />

what electronic states are involved in each level.<br />

19. Draw a diagram of a classical light wave and label the axes (you may ignore<br />

magnetic fields). On this wave identify the wavelength and amplitude.


Chem 155 <strong>Final</strong> review topics and questions:<br />

20. Fill in the table to indicate what happens when HeNe laser radiation (wavelength<br />

= 632.8 nm) passes from air (n = 1) into glass (n = 1.6).<br />

Wavelength / nm Frequency /<br />

Air 632.8 4.74E14 1.96<br />

Glass 395.5 4.74E14 1.96<br />

s -1<br />

Energy / eV<br />

c<br />

c<br />

3.0010 8 m s<br />

632.810 9 m<br />

4.741 10 14 Hz<br />

632.8<br />

1.6<br />

395.5<br />

E<br />

h<br />

h c<br />

6.62610 34 J s 3.0010 8 m s<br />

632.810 9 m<br />

6.2410 18 eV J<br />

1.96eV<br />

21. How much light is reflected at normal incidence<br />

2 1.6 1 1.0 2 1<br />

2 1<br />

2<br />

100% 5.3%


Energy / eV<br />

Chem 155 <strong>Final</strong> review topics and questions:<br />

22. Light of variable wavelength is incident on a piece of metal in vacuum, the metal<br />

is held at zero volts. Electrons emitted from the metal are collected and analyzed<br />

as a function of energy. Draw a diagram of the photoelectron energy versus the<br />

irradiating light frequency. Identify the x-intercept and the slope of the curve and<br />

indicate the significance of both.<br />

See notes on photoelectric effect: x-intercept is the work function of the metal –<br />

the energy required to take an electron out of the conduction band and into<br />

vacuum. The slope of the line is Plank’s constant.<br />

23. A small hypothetical molecule has the following energy level diagram. Indicate,<br />

using arrows, the transitions corresponding to infrared light absorption, visible<br />

light absorption, and visible light fluorescence. Be prepared to sketch the<br />

absorbance or fluorescence spectra as well.<br />

3<br />

2<br />

1<br />

Vis<br />

abs.<br />

Vis<br />

fluor.<br />

Vis<br />

abs.<br />

Vis<br />

fluor.<br />

0<br />

IR<br />

abs.<br />

400 500 600<br />

Wavelength / nm increasing


Path of analyte through plasma or flame <br />

Chem 155 <strong>Final</strong> review topics and questions:<br />

================================================================<br />

Part II Practice problems:<br />

================================================================<br />

1. Fill in the empty boxes consistent with the diagram. SEE NOTES<br />

In boxes 1 to 6 inddicate in what form the<br />

analyte is likely to exist:<br />

6<br />

In boxes 7 and 8 below put the<br />

equation that relates concentration<br />

and light power corresponding to<br />

emission (7) and absorption (8):<br />

5<br />

Emission<br />

7<br />

HCL<br />

h<br />

4<br />

Absorption<br />

8<br />

3<br />

2<br />

1<br />

Nebulize<br />

Liquds<br />

Solids<br />

Gases


Chem 155 <strong>Final</strong> review topics and questions:<br />

2. Compare Ar-plasma and air-C 2 H 2 flames in the following categories:<br />

Quality<br />

circle correct<br />

Electron Ar-plasma has higher lower equal air-C 2 H 2 flame.<br />

density<br />

e - density than<br />

Temperature Ar-plasma is higher lower equal air-C 2 H 2 flame.<br />

temperature than<br />

Chemical Ar-plasma has higher lower equal air-C 2 H 2 flame.<br />

reactivity<br />

reactivity than<br />

Formation of Ar-plasma is higher lower equal air-C 2 H 2 flame.<br />

oxides<br />

likelihood than<br />

Atomization<br />

efficiency<br />

Ar-plasma is superior inferior<br />

equal to<br />

air-C 2 H 2 flame.<br />

3. Compare inductively coupled plasma atomic emission spectrometry (ICP-AES) to<br />

flame atomic absorption spectroscopy (FAAS) in the following categories:<br />

Quality<br />

circle correct<br />

choice<br />

Cost to buy / ICP-AES is higher, lower, FAAS<br />

operate<br />

equal cost than<br />

Simultaneous ICP-AES is more, less, FAAS<br />

Multielement<br />

detection<br />

equally<br />

competent than<br />

Dynamic Range ICP-AES has larger, smaller, FAAS<br />

equal dynamic<br />

range than<br />

Detection Limit ICP-AES has higher, lower,<br />

equal detection<br />

limits than<br />

FAAS<br />

4. Because of the mulit-element capability and atomization / temperature sensitivity<br />

of emission intensity, the following analytical method has proved highly<br />

successful in ICP-AES:<br />

a. Standard addidions c. D2 background correction<br />

b. Internal standards d. nonlinear calibration analysis<br />

5. Formation of oxides or molecular species in flame/plasma can be suppressed by:<br />

c. EDTA or other complexing agents<br />

d. Addition of KCl to the matrix<br />

e. Addition of oxyanions such as sulfate or phosphate.<br />

f. Standard additions methods.<br />

6. Ionization of analyte atoms in flame/plasma can be suppressed by:<br />

g. EDTA or other complexing agents<br />

h. Addition of KCl to the matrix<br />

i. Addition of oxyanions such as sulfate or phosphate.<br />

j. Internal standards methods.


Chem 155 <strong>Final</strong> review topics and questions:<br />

7. Fill in the following table:<br />

Absorbance P Po %T C / M<br />

0.00 1 1.00 100 0.0000<br />

0.30 0.5 1.00 50 0.0003<br />

1.00 0.1 1.00 10 0.001<br />

2.00 0.01 1.00 1 0.002<br />

3.00 0.001 1.00 0.1 0.003<br />

A log %T<br />

100<br />

10 A %T<br />

100<br />

%T 100 10 A<br />

100 10 0.3 50 100 10 1 10 100 10 2 1 100 10 3 0.1<br />

%T 100 P P0<br />

P<br />

%T<br />

100 P0<br />

8. Based on this, comment on the relative reliability (i.e. accuracy or precision) of<br />

absorbance measurements at A=1 and A=3.<br />

A=1 is good, A=3 means light power P is 1/1000 of blank - too small of a light<br />

power signal to work with


Chem 155 <strong>Final</strong> review topics and questions:<br />

9. Define the following:<br />

a. Mobile phase<br />

b. Stationary phase<br />

c. General elution problem<br />

Changing to conditions that are strong enough to elute strongly retained<br />

components will fail to resolve weakly retained ones and conditions that are weak<br />

enough to resolve weakly retained components will fail to elute strongly retained<br />

components. Solution is GRADIENT ELUTION: to change elution conditions<br />

during chromatographic run: begin with weakly eluting conditions and ramp to<br />

strongly eluting ones. In many cases this will give adequate time to separate<br />

weakly retained species, but will elute strongly retained ones before too much<br />

broadening or time has passed


Chem 155 <strong>Final</strong> review topics and questions:<br />

10. Identify 5 processes that lead to band broadening in HPLC and describe them.<br />

Van Deemter terms can be used, plus injection zone size and column<br />

overloading.<br />

a. Eddy diffusion / multipath term<br />

b. Longitudinal diffusion<br />

c. Resistance to mass transfer<br />

d. Injection zone width<br />

e. Column overloading<br />

11. Identify the strong and weak mobile phase modifiers:<br />

Identify as strong, weak or not used.<br />

Name<br />

Stationary Water Methanol Hexane<br />

Phase<br />

Reverse-phase Oil -<br />

weak strong Not used<br />

octadecane<br />

Normal-phase Bare silica Not used strong weak<br />

12. A 1.000 cm cuvette filled with water (blank) was paced in a spectrophotometer<br />

set to 640 nm. The detector signal was 1509 A.. With a sample of 1.06x10 -5 M<br />

sample of magnesium phthalocyanine (MgPC) the detector signal read 1312 A.<br />

What is the molar extinction coefficient of MgPC<br />

A b C log<br />

P<br />

P0<br />

P<br />

log<br />

P0<br />

b C<br />

log 1312<br />

1509<br />

5.732 10 3<br />

1 1.0610 5<br />

13. Why are internal standards used in the GCMS experiment<br />

d. To compensate for injection variability.


Chem 155 <strong>Final</strong> review topics and questions:<br />

14. What is the function of the reagent blank in the metals experiment<br />

To evaluate analyte levels in the Blank.<br />

15. What is the function of the spike recovery analysis in the metals experiment<br />

To validate the sample preparation step.<br />

16. Why are the absorption and emission maxima offset for the fluorophore<br />

rhodamine 6G<br />

Absorbance is electronic plus vibrational energy change but<br />

Emission is electronic minus vibrational energy change.<br />

Abs.<br />

Em.<br />

Em. arrows<br />

are shorter.<br />

17. Why are ABC samples run without solvent to measure their FTIR specta<br />

Samples are measured “neat” because the solvent would absorb the IR radiation.<br />

18. Why is a cuvette not used to measure the FTIR spectra<br />

Typical IR chromophore has ε 100-1000 M -1 cm -1 , and neat, C may be 1-10 M.<br />

A = εC = 100 minimum.<br />

T=10 -A = 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001<br />

No light would get through…


Chem 155 <strong>Final</strong> review topics and questions:<br />

19. Circle the correct answer. In comparison to double-beam scanning<br />

spectrophotometers, diode array spectrophotometers are:<br />

Quality<br />

Spectrometer Type<br />

Diode Array Double Beam<br />

more accurate absorbance<br />

x<br />

more accurate wavelength<br />

x<br />

much faster<br />

x<br />

higher resolution<br />

x<br />

more complex<br />

x<br />

more expensive<br />

x<br />

20. What is the IR selection rule<br />

Dipole moment must change during vibration.<br />

21. What is the Raman selection rule<br />

Polarizability must change during vibration.<br />

22. Sketch the normal modes of vibration of the water molecule and indicate the<br />

Raman and IR activity:<br />

Mode Sketch IR Active Raman Active<br />

Symmetric stretch<br />

O<br />

Yes Yes<br />

H<br />

O<br />

Antisymmetric<br />

Yes<br />

No<br />

Stretch<br />

H H<br />

O<br />

Bend Yes Yes<br />

H<br />

H<br />

H<br />

23. The frequency of the Raman Stokes line for 488.0 nm laser light scattering from<br />

a 1500 cm -1 CO stretching vibrational mode.<br />

v Laser<br />

10 7 nm<br />

cm<br />

488.0nm<br />

v Laser 20492cm 1 v Vibration 1500cm 1<br />

v Raman v Laser v Vibration v Raman 18992cm 1 Stokes Line<br />

v Raman v Laser v Vibration v Raman 21992cm 1 Anti-Stokes Line


Chem 155 <strong>Final</strong> review topics and questions:<br />

24. Elaborate the following acronyms:<br />

e. ATR – Attenuated Total Reflection<br />

f. FTIR – Fourier Transform Infrared<br />

25. Which will be observed at a higher frequency the OH stretch in ethanol or the<br />

OD stretch in deuterated ethanol<br />

k<br />

OH Because H is lighter than D and v where k = bond force constant and µ<br />

= reduced mass of oscillator.<br />

26. In an FTIR, high resolution corresponds to:<br />

g. Long interferometer drive<br />

h. High beam intensity<br />

i. High absorbance<br />

j. High mirror velocity<br />

k. Double-beam optics<br />

27. Fill in the following to indicate the transitions involved in Stokes and anti-Stokes<br />

Raman scattering:<br />

S1<br />

So


Chem 155 <strong>Final</strong> review topics and questions:<br />

28. Fill in the following table:<br />

Mass analyzer Resolution<br />

(high or low)<br />

Input:<br />

Continuous / pulsed<br />

Cost<br />

(high or low)<br />

Quadrupole Low Continuous Low<br />

Double-focusing<br />

High Pulsed High<br />

electric / magnetic<br />

sector.<br />

Time of flight. High Pulsed High<br />

29. Fill in the following table:<br />

Ionization Source Fragmentation<br />

(high or low)<br />

Electron Impact<br />

High<br />

(EI)<br />

Mode:<br />

Continuous / pulsed<br />

Cont.<br />

Chemical ionization<br />

(CI)<br />

Matrix Assisted<br />

Laser Desoprtion<br />

Ionization (MALDI)<br />

Electrospray<br />

Ionization (ESI)<br />

Low<br />

Low<br />

Low<br />

Cont.<br />

Pulsed<br />

Cont.


Signal<br />

Chem 155 <strong>Final</strong> review topics and questions:<br />

30. Label the arrows:<br />

Factors that determine performance in chromatography:<br />

a<br />

b<br />

c<br />

d<br />

0 5 10 15 20 25 30<br />

Ret ention T ime / s<br />

Improve resolution a Retention Time c Band width d<br />

Improve efficiency a Determined by K P –<br />

partition coefficient<br />

Improve selectivity b Achieved by change of<br />

mobile phase<br />

Achieved by change of<br />

stationary phase<br />

c<br />

b<br />

b<br />

Set by MP velocity and<br />

SP quality<br />

Set by longitudinal<br />

diffusion<br />

Set by resistance to<br />

mass transfer<br />

Set by variable flow path<br />

d<br />

d<br />

d<br />

d

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