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Diffusion Manual Outline

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3<br />

Chapter 1<br />

Section 1.1<br />

Introduction to <strong>Diffusion</strong><br />

Introduction<br />

Self-diffusion is a measure of the translational motion of a molecule. <strong>Diffusion</strong> is<br />

closely related to molecular size as illustrated by the Stokes-Einstein equation seen<br />

below:<br />

D = k T<br />

f<br />

where k is the Boltzman constant, T is the temperature and f is the friction coefficient.<br />

For the simple case of a spherical particle of a hydrodynamic radius r s in a solvent of<br />

viscosity η, the friction factor is given by f = 6 π η r s<br />

Translational diffusion can be used to determine the size and shape of individual<br />

molecules as well as molecular aggregates. This provides an excellent way of analyzing<br />

complex mixtures without having to physically separate out each individual component.<br />

Pulsed-field gradient (PFG) NMR can be used to measure translational diffusion<br />

by applying externally controlled magnetic field gradients. These gradients spatially<br />

encode the position of each nuclear spin. This spatial distribution can be decoded after<br />

waiting a short time by applying a second gradient. If the waiting time is very short<br />

between the encoding and decoding gradients the spins will not have had a chance to<br />

change position and in turn the magnetization will refocus without a net phase change.<br />

However the spins that have moved during the waiting time between the encoding and<br />

decoding steps will acquire a net phase change. The summation of the accumulated<br />

phases over the entire sample will lead to partial cancellation of the observable<br />

magnetization and hence an attenuation of the NMR signal. This signal attenuation is<br />

dependent on the strength of the applied gradients, the time between the gradients<br />

(diffusion time) and the diffusion coefficient of the molecules under study.<br />

Section 1.2<br />

Some Theory<br />

Nuclear spins within a homogeneous magnetic field precess at the Larmor<br />

frequency according to the equation<br />

ω o = γB o<br />

where ω o is the Larmor frequency<br />

γ is the gyromagnetic ratio and<br />

B o is the strength of the magnetic field

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