Using Lomb-Scargle Periodograms to Identify Periodic Genes in ...

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Somitogenesis DatasetPerturbation (“Jitter”) and Permutation TestsOrder Nveau.pptPerturbation (times):27.75443 33.08618 42.6607 11.04462 -0.6288767 18.55415 12.93994 44.90501 59.98529 67.2538 46.87758 55.91625 74.7259178.9921 83.98062 104.9910 78.12926 77.38472 111.5297 109.2331Permutation (order for fixed times):7 5 6 8 4 3 2 1 | 11 12 9 10 | 13 | 17 15 16 18 14 | 20 1938
Somitogenesis DatasetPerturbation (“Jitter”) and Permutation TestsBestRank ProductJitterSpreadHistograms.pdf, Feb 2005WorstBestRank ProductPermuteSpreadHistograms.pdfWorst 39
Page 1 and 2: Using Lomb-Scargle Periodogramsto I
Page 3: Periodic Patterns in BiologyA verte
Page 6 and 7: What is a Periodogram?• A graph s
Page 8 and 9: Lomb-Scargle PeriodogramExample Usi
Page 10 and 11: Lomb-Scargle PeriodogramExample Usi
Page 12 and 13: Lomb-Scargle Periodogram Experiment
Page 14 and 15: Lomb-Scargle Periodogram Experiment
Page 16 and 17: Lomb-Scargle Experiment:Mixtures: P
Page 18 and 19: Data Pipeline to Apply to Microarra
Page 20 and 21: Bozdech’s Plasmodium dataset:1. A
Page 30 and 31: Bozdech’s Plasmodium dataset:Boze
Page 32 and 33: Mary-Lee’s Somitogenesis DatasetW
Page 34 and 35: Somitogenesis DatasetMary-Lee, Scie
Page 36 and 37: Somitogenesis DatasetDo we care abo
Page 40 and 41: Somitogenesis DatasetPerturbation (
Page 42 and 43: Somitogenesis DatasetPerturbation (
Page 44 and 45: Somitogenesis DatasetWhat periodici
Page 46 and 47: Conclusions• Lomb-Scargle periodo
Page 48: AcknowledgementsPourquie LabOlivier

Using Lomb-Scargle Periodograms to Identify Periodic Genes in ...

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