The ultimate goals of the laboratory are to identify new genes that interact with BCL6 and to gain a better understanding ofthe role of PDCD2 in lymphoma pathogenesis. Specific research aims are to 1) identify the genes that cooperate with BCL6 inthe biological events that lead to lymphoma development; and 2) study the programmed cell death-2 (PDCD2) gene, which thelaboratory previously identified as a target of BCL6.BCL6 may promote lymphoma development, at least in part, by interfering with normal cellular apoptosis events throughrepression of PDCD2. The laboratory recently showed that the BCL6 protein binds to the PDCD2 promoter both in vitro and invivo, that BCL6 can repress transcription from the PDCD2 promoter, and demonstrated the anticipated inverse relationship inthe expression patterns of BCL6 and PDCD2 in mouse lymphoid tissues as well as in human B- and T-cell lymphomas. Further,with the use of small interfering RNA duplexes, the Baron group was able to show that knockdown of the BCL6 protein in alymphoma cell line leads to increased PDCD2 protein expression. These studies will likely provide further insight into thisimportant human disease and support the development of new molecular tools for the treatment of lymphoma.Theme: Experimental TherapeuticsToyosi Odenike, MDAssistant Professor of MedicineThe long term goal of Dr. Odenike’s research is to translateour understanding of the molecular-genetic pathways involvedin malignant hematologic diseases into meaningful, moreefficacious and less toxic therapeutic interventions. Animmediate focus of this effort is the clinical and translationaldevelopment of novel agents that target epigenetic changes inmyeloid malignancies. Recruitment of histone deacetylases andDr. Kenan Onel with a pediatric patientDNA hypermethylation are two pathways of epigenetic silencingwhich have been linked and implicated in the transcriptionaldysregulation underlying a variety of myeloid neoplasia. Unlike gene deletions which are irreversible, epigenetic changes canpotentially be reversed by chromatin remodeling agents such as histone deacetylase and DNA methyltransferase inhibitors,restoring tumor cells to a more transcriptionally normal state. A number of ongoing and recently-completed projects are basedon the hypothesis that chromatin remodeling agents are active in a wide spectrum of myeloid neoplasms, and that the activity ofthese agents is mediated by epigenetic modulation of gene expression.Specific aims of Dr. Odenike’s research are to 1) determine the clinical and biologic relevance of histone deacetylase (HDAC)inhibition in AML; 2) determine the clinical and biologic relevance of DNA methyltransferase (DNMT) inhibition in chronicmyeloproliferative neoplasms; 3.) investigate the effects of these agents on modulation of gene expression; and 4) optimize theactivity of these agents in myeloid neoplasms by developing rationally-designed combinations.The Odenike team has investigated the HDAC inhibitor, depsipeptide, in a multi-center NCI sponsored trial conducted throughthe University of Chicago Phase II Consortium in relapsed and refractory AML. This trial has, for the first time, demonstratedthat depsipeptide has selective antileukemic activity in patients with Core Binding Factor (CBF) leukemias, a cytogenetic subsetof AML where recruitment of histone deacetylases is an established mechanism of leukemogenesis. In addition, specific targetgenes, such as CDKN2A, CDKN2B, and MDR1, were significantly upregulated in the subset of patients with CBF leukemias aspreviously hypothesized. This has served as an important “proof of principle” for the mechanism of action of HDAC inhibitorsin AML and provides a potential rationale for the clinical investigation of these compounds in combination with other agentsin AML. In addition, the Odenike team demonstrated in a multi-center NCI sponsored trial conducted through the Universityof Chicago Phase II Consortium that the DNMT inhibitor, decitabine, has clinical activity in myelofibrosis, a disease for whichthere is no standard therapy.34UCCRC SCIENTIFIC REPORT 2009
Currently, combined DNMT and HDAC inhibition is being investigated in myeloid neoplasms in the context of an ongoingPhase I trial, given the synergy that has been observed in vitro between these 2 pathways of epigenetic silencing. Future workwill focus on investigating combinations, involving agents that target aberrant transcription (such as chromatin remodelingagents) with those that inhibit dysregulated signaling pathways, in an effort to optimize the clinical and biologic effects ofthese agents in myeloid neoplasia.Sonali Smith, MDAssociate Professor of MedicineA major challenge in developing a research agenda for Hodgkin and non-Hodgkin lymphomas is the current recognitionof nearly 60 unique clinicopathologic subtypes. Many of the subtypes are in fact rare diseases with fewer than 5000 newcases per year throughout the country. The Lymphoma Program at The University of Chicago is a highly visible clinical andtranslational research program that has been in a period of substantial growth since 2001 and currently consists of fourfaculty members, including Drs. Koen van Besien, Sonali Smith, Kenneth Cohen, and Justin Kline. Dr. Smith, the associatedirector of the program, is institutional Principal Investigator on 10 clinical trials and hosts the annual International ChicagoLymphoma Symposium, the only lymphoma-dedicated symposium in the Midwest.Molecular Genetics& HematopoiesisThe Lymphoma Program at The University of Chicago has adopted a two-pronged approach in an effort to serve thevariety of patients seen in the clinic. The first is to provide opportunities for patients to participate in a range of clinicaltrials that are either subtype specific or that target a common oncogenic pathway believed to promote lymphomagenesis.Large scale front-line studies, intended for patients that are treatment-naïve, are primarily via collaborations forged withCALGB. Through the CALGB, Dr. Smith has published several reports, including a relatively widely quoted negative studyof thalidomide in patients with relapsed indolent lymphomas, which contrasts with the significant activity of secondgeneration immunomodulatory agents derived from thalidomide. The second programmatic approach is to focus onnew drug development for relapsed lymphomas through The University of Chicago Phase II Consortium. In this venue,investigator-initiated trials free of pharmaceutical bias are offered to patients with relapsed disease without other standardtreatment options. The University of Chicago, through this phase II mechanism, was the first to show activity of a classof agents called mTOR inhibitors against two of the most common types of lymphomas (diffuse large B-cell lymphomaand follicular lymphoma). mTOR, or mammalian target of rapamycin, is a ser/thr kinase that controls the start of mRNAtranslation. Several known oncogenic pathways converge upon mTOR, making it an attractive target to modulate upstreamsignals simultaneously. Furthermore, mTOR controls translation of several mRNA transcripts that are critical componentsof lymphomagenesis, including CCND1, VEGF, and MYC. Two subsequent proposals are being explored to examine mTORinhibition, in combination with other biologic agents, as well as with standard cytotoxic chemotherapy. In addition, theProgram seeks to identify predictive markers for response to mTOR inhibitors.The other major focus of the Lymphoma Program is to explore the role of both autologous and allogeneic hematopoietic stemcell transplantation for patients with relapsed lymphomas. High dose chemotherapy followed by autologous stem cell rescue(ASCT) can successfully salvage many patients with chemosensitive relapsed aggressive lymphomas, but relapse remains acommon and usually fatal event. The Program recently completed a trial evaluating the safety and efficacy of post-transplantimmunomodulation using GM-CSF and IL-2 to augment rituximab, with the goal of eradicating minimal/undetectableresidual disease following high dose chemotherapy to reduce relapse. Two ongoing studies are extending interest in posttransplantimmunomodulation, one trial using Ontak (toxin-linked monoclonal antibody against IL-2 receptor) followingtransplant for T-cell lymphomas and a second trial evaluating a novel monoclonal antibody targeting PD-1 as part of the B7-family of surface receptors for patients with diffuse large B-cell lymphomas.In summary, the Lymphoma program currently has 15 active therapeutic and database protocols addressing both commonand uncommon lymphoma patient populations. Dr. Smith’s future research objective is to expand on mTOR inhibition as aplatform for anti-lymphoma treatments.UCCRC SCIENTIFIC REPORT 200935
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in as many as 86% of the measuremen
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investigators and engineers from co
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have important clinical implication
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irradiated to a variety of doses ne
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Program 6Cancer Risk and Prevention
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to prostate cancer. The work has ma
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Dr. Ahsan’s team showed that sele
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Daniel McGehee, PhDAssociate Profes
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Sarah Gehlert, PhDProfessor of the
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Selected New Funding•• Lisa San
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Gehlert, Sarah PhD* Gehlert S, Sohm
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Olopade, Olufunmilayo MBBS* Bradbur
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Clinical Trials ActivityDr. Alessan
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The clinical trials activity of the
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Shared ResourcesDr. Vytas Bindokas
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Biostatistics Core FacilityScientif
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Other Resources and Centers
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Cancer Resource CenterThe UCCRC off
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CECOS has successfully developed an
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HighlightsThe Gwen and Jules Knapp
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Leukemia and Lymphoma Society Speci
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Institute for Genomics and Systems
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Systems Biology Approach for the St
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Immunology and Cancer ProgramMaria-
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www.uccrc.uchicago.eduEditor: Hoyee