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The Plant Vascular System: Evolution, Development and FunctionsF

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2010; Schreiber et al. 2011). <strong>The</strong> next decade should<br />

bring rapid progress as molecular biology continues to<br />

merge with comparative <strong>and</strong> evolutionary whole plant<br />

physiology.<br />

Long-distance Signaling Through<br />

the Phloem<br />

Over the past several decades, considerable attention has<br />

been paid to unraveling the mechanics of phloem loading.<br />

Genetic <strong>and</strong> molecular studies have identified the major players<br />

that mediate in the loading of sugars, predominantly sucrose,<br />

into the CC-SE complex. Interestingly, in terms of the apoplasmic<br />

loaders, the recent identification of the permease that<br />

controls release of sucrose from the phloem parenchyma cells<br />

into the CC apoplasm (Figure 13B, I) served to complete the<br />

molecular characterization of this important pathway (Chen<br />

et al. 2012b). Based on such studies <strong>and</strong> extensive physiological<br />

experiments, the nature of the photosynthates (sugars<br />

<strong>and</strong> amino acids) loaded into the phloem translocation stream<br />

is well established.<br />

<strong>The</strong> phloem has also been shown to carry additional cargo,<br />

including the phytohormones auxin, gibberellins, cytokines <strong>and</strong><br />

abscisic acid (Hoad 1995), signaling agents involved in plant<br />

defense (discussed later in the review), as well as certain<br />

proteins <strong>and</strong> various forms of RNA (Lough <strong>and</strong> Lucas 2006;<br />

Buhtz et al. 2010). That specific proteins are present in the<br />

phloem has been recognized for some time (Fisher et al.<br />

1992; Bostwick et al. 1992), <strong>and</strong> furthermore, some such<br />

proteins have been shown to move within the translocation<br />

stream (Golecki et al. 1998, 1999; Xoconostle-Cázares et al.<br />

1999).<br />

Phloem proteins: Potential roles in enucleate SE<br />

maintenance <strong>and</strong> long-distance signaling<br />

Phloem exudate can be collected from a number of plant<br />

species, <strong>and</strong> this feature has been used to develop proteomic<br />

databases for these species (Barnes et al. 2004; Giavalisco<br />

et al. 2006; Lin et al. 2009; Rodriguez-Medina et al. 2011).<br />

This collection process requires that an incision be made<br />

into the petiole or stem in order to allow the phloem to<br />

“bleed.” Thus, due care is required to minimize the level<br />

of protein contamination from surrounding (CCs <strong>and</strong> phloem<br />

parenchyma) tissues. As excision results in an abrupt pressure<br />

drop between the sieve tube system <strong>and</strong> the surrounding cells,<br />

it is generally appreciated that some level of contamination<br />

is unavoidable (Atkins et al. 2011). Here, use of molecular<br />

markers such as Rubisco (Doering-Saad et al. 2006; Giavalisco<br />

et al. 2006; Lin et al. 2009), can help in assessing the extent<br />

to which contamination may have occurred. Generally,<br />

Insights into <strong>Plant</strong> <strong>Vascular</strong> Biology 339<br />

contamination does not appear to be an important issue,<br />

especially for the prominent proteins, but proteins present in<br />

very low abundance need to be viewed with a degree of<br />

caution.<br />

Other methods, including cutting aphid stylets (Aki et al.<br />

2008; Gaupels et al. 2008a), EDTA-induced phloem exudation<br />

(Gaupels et al. 2008b; Batailler et al. 2012) <strong>and</strong> laser microdissection<br />

of phloem tissues (Deeken et al. 2008) have also<br />

been employed to develop phloem databases. Collectively,<br />

these studies have established phloem proteome databases<br />

containing more than 1,000 proteins, with activities encompassing<br />

a very broad range of activities, including enzymes involved<br />

in metabolic networks, amino acid synthesis, protein turnover,<br />

RNA binding, transcriptional regulation, stress responses, defense,<br />

<strong>and</strong> more.<br />

<strong>The</strong> next step will be to partition these proteins into those<br />

involved in local maintenance of the functional enucleate sieve<br />

tube system <strong>and</strong> long-distance signaling. For these studies,<br />

a combination of hetero-grafting experiments conducted between<br />

species from different genera or families, <strong>and</strong> advanced<br />

mass spectroscopy methods, will prove most useful. <strong>The</strong> cucurbits,<br />

such as pumpkin, cucumber, melon <strong>and</strong> watermelon,<br />

from which analytical quantities of phloem exudate can generally<br />

be collected, may prove ideal for this purpose. <strong>The</strong><br />

recent completion of annotated genomes for three of these<br />

cucurbits (Huang et al. 2009; Garcia-Mas et al. 2012; Guo<br />

et al. 2012) adds to the utility of these species for such critical<br />

experiments.<br />

<strong>The</strong> complexity of the phloem proteome raises the question<br />

as to the stability of these proteins <strong>and</strong> the mechanism by<br />

which they might be turned over within the sieve tube system.<br />

<strong>The</strong> large population of proteinase inhibitors probably<br />

prevents turnover by simple proteolysis (Dinant <strong>and</strong> Lucas<br />

2012). However, identification in the phloem sap of ubiquitin<br />

<strong>and</strong> numerous enzymes involved in protein ubiquitination <strong>and</strong><br />

turnover, including all the components of the 26S proteasome<br />

(Figure 19), indicates that enucleate SEs likely have retained the<br />

ability to engage in protein sorting <strong>and</strong> turnover (Lin et al. 2009).<br />

Thus, once they have performed their function(s), phloem<br />

proteins can be degraded either through export into neighboring<br />

CCs, or in loco via the ubiquitin-26S proteasome pathway.<br />

<strong>The</strong> mature, enucleate sieve tube system also has been<br />

shown to contain all the enzymes <strong>and</strong> associated activities<br />

required for a complete antioxidant defense system (Walz et al.<br />

2002; Lin et al. 2009; Batailler et al. 2012). Interestingly, these<br />

enzyme activities appear to increase in response to imposed<br />

drought stress (Walz et al. 2002). This complement of enzymes<br />

would appear to function, locally, to afford protection against<br />

oxidative stresses, thereby preventing damage to essential<br />

components of the SEs. Such local maintenance functions will<br />

likely be performed by a specific subset of the proteins detected<br />

in phloem exudates.

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