Master's Thesis - Computer Graphics and Visualization - TU Delft

$g SetInputText MyBox:oil
$g Render
# Meaning of the three add viewable commands above:
# The first asks to add the Box itself to the graphics
# The second asks to add the surfactant molecules in the box to be added
to graphics
# The second asks to add the oil molecules in the box to be added to graphics
# If you do not like any of the default bead colors you can change as follows
# $Box SetBeadColors B Red
# $g UpdateViewables
# Assign repulsive Bead-bead interaction parameters
# If parameters for A-B is defined, B-A is not required
# as they would be considered same.
$cal SetA W W 25
$cal SetA W O 80
$cal SetA O O 25
# Alternatively it is also possible to set the interaction
# parameters through the CulgiBeadParametersCmds
# Set up the DPD simulation
$cal SetTimeStep 0.05
$cal SetTemperature 1.0
# We want to save Instantaeous system energy during simulation
# A file named MyBox_Energy.ctf would be generated due to this
$cal SetEnergySaveFrequency 10
# We want to add live graphics update during simulation
$cal AddSystemGraphics $g
$cal SetGraphicsUpdateFrequency 50
# We want to save coordinates during simulation for further analysis
# A file named MyBox.cda would be generated due to this
$cal SetCoordinateSaveFrequency 50
# Launch the simulation. Comprehensive Simulation results would be
# written out in the MyBox.out file
$cal RunDPD 1000
set plot [$c GetXYPlotCmds]
$plot SetPosition 50 50
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