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Publications
RESEARCH STAFF
Linda Amaral Zettler, Staff c
David Beaudom, Research A:
Steven J. Biller, Resean.
Amy Crump, Resear
Patrick :
I
Degnan,
Ashita Dhillon .. Scientist
Daniel Golde :., ate Student
Sulip Gosv :
Josh Herb
Jennifer
>
-earch Assistant II
...itdoctoral Scientist
Research Assistant
I
Ulandt Kim, Research Assistant II
Abby Laatsch, Research Assistant I
Erica Lasek-Nesselquist, Research Assistant I
Adam Lazarus, Research Assistant I
Bruce Luders, Research Assistant II
Jessica Mark Welch, Postdoctoral Scientist
David Mark Welch, Staff Scientist II
Andrew McArthur, Assistant Scientist
Hilary Morrison, Staff Scientist II
Maria Murray, Research Assistant
I
Daniel Myers, Lab Assistant
Laila Nahum, Postdoctoral Scientist
Lorraine Olendzenski, Postdoctoral Scientist
Bertil Olsson, Senior Research Assistant
Sarah Pacochal, Research Assistant II
Carmen Palacios, Postdoctoral Scientist
Gretta Serres, Staff Scientist I
Lynn Sherrer, Graduate Student
Jillian Ward, Research Assistant I
VISITING SCIENTISTS
Maristela Camargo, University of Sao Paolo,
Brazil
Robert Campbell, Ares Pharmaceutical
Lynne McAnelly, University of Texas, Austin
ADJUNCT SCIENTISTS
Matthew Meselson, Harvard University
Roger Milkman, Professor Emeritus, University
of Iowa
Harold Zakon, University of Texas, Austin
HIGH SCHOOL INTERN
Alexandria Papa
VISITING UNDERGRADUATE
Alissa Cohen
HHMI SUMMER UNDERGRADUATES
Sarah Biber
Marsha Wheeler
NATIONAL SCIENCE FOUNDATION
RESEARCH EXPERIENCE FOR
UNDERGRADUATE STUDENTS
Chad Brock
Andrew Magis
Amy McCurley
John Sander
ADMINISTRATIVE STAFF
Pauline Lim
Tara Nihill
Cross, M
,
Kieft, R. Sabatini, A Dirks-Mulder,
and P Borst 2002 J-binding protein
increases the level and retention of the unusual
base J in
trypanosome DNA Moi Microbiol
46: 37-47
Dehal, P., Y Satou, R. K. Campbell, J. Chapman,
B Degnan, eta). 2002. The draft genome of
Ciona intestina/is insights into chordate and
vertebrate origins. Science 298 2157-2167.
Edgcomb, V P., D T Kysela, A. Teske, A.
de Vera GUmez, and M. L.
Sogin 2002 Benthic
eukaryotic diversity in the Guaymas Basin
hydrothermal vent environment Proc Nat/.
Acad. Sci. USA 99: 7658-7662.
Edgcomb, V. P., A. G. B. Simpson,
L. A. Amaral
Zettler, T A. Nerad, D J Patterson, M E
Holder, and M. L Sogin 2002 Pelobionts are
degenerate protists: insights from molecules and
morphology Mol Bio/. Evol. 19 978-982
Garcla-Verela, M P.
,
Cummings, G Perez-
Ponce de Leon, S L Gardner, and J. P Laclette
2002 Phylogenetic analysis based on 18S
nbosomal RNA gene sequences supports the
existence of class Polyacanthocephala
(Acanthocephala) Mol Phy/ogenet. Evol
23: 288-292.
Laan, M., H. Richmond, C. He, and R K
Campbell 2002 Zebrafish as a model for
vertebrate reproduction characterization of
the first functional zebrafish (Danio reno)
gonadotropin receptor Gen. Comp. Endocnnol
125: 349-364.
Langford, T D ,
J D. Silberman, M E -L
Weiland, S G Svard, J.M McCaffery, M L
Sogin, and F D Gillin 2002 Giardia lamblia
identification and characterization of Rab
and GDI proteins in
a genome survey of the
ER to Golgi endomembrane system. Exp
Parasite/ 101: 13-24
Morrison, H G
, Zamora, R K. Campbell,
and M. L. Sogin. 2002 Inferring protein function
from genomic sequence
Giardia lamblia
expresses a phosphatidyhnositol kinase-related
kinase similar to yeast and mammalian TOR.
Comp. Siochem Physio/. B Siochem
133:477-491
Mol Biol.
Nixon, J E J,A Wang, J. Field, H G Morrison,
A G McArthur, M. L Sogin, B J Loftus, and J
Samuelson. 2002 Evidence for lateral transfer of
genes encoding ferredoxins, nitroreductases,
NADH oxidase, and alcohol dehydrogenase 3
from anaerobic prokaryotes to Giardia lamblia
and Entamoeba histolytica Eukaryotic Cell
1 181-190
Nixon, J E J ,
A Wang, H G Morrison, A. G.
McArthur, M. L Sogin, B Loftus, and J
Samuelson 2002 A spliceosomal mtron in
Giardia intestina/is. Proc. Nat/. Acad. Sci. USA
99 3701-3705
Palacios, C J.
, J Wernegreen 2002.
A strong effect of AT mutational bias on
ammo acid usage in Buchnera is mitigated at
high-expression genes. Mol. Biol. Evol 19
1575-1584
Podar, M L
, Mullmeaux, H -R Huang, P S
Perlman, and M L Sogin 2002 Bacterial
Group introns II
in a deep-sea hydrothermal
vent environment App/ Environ. Microbio/
68: 6392-6398
Sabatini, R
,
Meeuwenoord, J H van Boom,
and P. Borst 2002 Recognition of base J in
duplex DNA by J-bmding protein J Biol Chem
277 958-966.
Sabatini, R
, Meeuwenoord, J. H van Boom,
and P. Borst. 2002 Site-specific interactions of
JBP with base and sugar moieties in duplex
J-DNA. J. Bio/. Chem. 277 28,150-28,156
Simpson, A. G- B., L A. Amaral Zettler, F.
Gomez, E Zettler, B G Keenan, R Amils, and
M L Sogin 2002 Heavy-metal, acid-loving
eukaryotes from Spain's "River of Fire " Nature
417 137
Simpson, A G. B J ,
Roger, J D Silberman,
D D Leipe, V. P.
Edgcomb,
L. S Jermnn, D J
Patterson, and M L Sogin 2002. Evolutionary
history of "early diverging" eukaryotes. the
excavate taxon Carpediemonas is a close relative
of Giardia. Mol Biol. Evol. 19: 1782-1791
Sun, C.-H., D. Palm, A. G. McArthur, S. G. Svard,
and F G Gillin 2002 A novel Myb-related
protein involved in transcnptional
activation of
encystation genes
in Giardta lamblia Mo/.
Microbio/- 46: 97 1-984
I
Tamas, ,
L Klasson, B Canback, A K, Naslund,
A S Eriksson, J Wernegreen, J P. Sandstrom,
N A Moran, and S G Andersson 2002 50
million years of genomic stasis in endosymbtotic
bacteria Science 296- 2376-2379
Teske, A., K -U Hmrichs, V Edgcomb, A de
Vera Gomez, D. Kysela, S P. Sylva, M. L Sogin,
and H W Jannasch 2002 Microbial diversity
of hydrothermal sediments in the Guaymas
Basin: evidence for anaerobic methanotrophic
communities App/. Environ. Microbiol.
68: 1994-2007
Wernegreen, J J 2002. Genome evolution in
bacterial endosymbionts of insects Nat Rev.
Genet 3: 850-861
Wernegreen, J J ,
A. B Lazarus, and P. H
Degnan 2002 Small genome of Candiclatus
b/ochmannia, the bacterial endosymbiont of
Camponotus, implies irreversible specialization
to an mtracellular lifestyle Microb/o/ogy 148:
2551-2556.