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ImageJ Basics

ImageJ Basics

ImageJ Basics

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Plugins & Macros<br />

Plugins are additional software modules or code which provide the ability to perform<br />

specific tasks. Writing macros using the <strong>ImageJ</strong> macro language allows you to<br />

string a series of commands together to perform batch operations. These can also be<br />

converted to plugins.<br />

‣Install plugins if required:<br />

Download plugins and Save them in <strong>ImageJ</strong> Plugin folder (program files)<br />

Restart <strong>ImageJ</strong>: Plugins automatically get placed in the Plugins menu<br />

> There is a list of available plugins here:<br />

http://rsb.info.nih.gov/ij/plugins/index.html<br />

> There is a plugins collection preorganised in folders available at:<br />

http://rsb.info.nih.gov/ij/plugins/collection.html<br />

> Many more are available on the website and from other users. Some people have<br />

developed their own collections of plugins and bundled them together. McMaster<br />

Biophotonics Institute has a great collection for microscopy:<br />

http://rsb.info.nih.gov/ij/plugins/mbf-collection.html<br />

Biology<br />

Imaging

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