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Gene Cloning and DNA Analysis: An Introduction, Sixth Edition ...

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Glossary 305<br />

Liposome A lipid vesicle sometimes used to introduce <strong>DNA</strong> into an animal or plant<br />

cell.<br />

Lysogen A bacterium that harbors a prophage.<br />

Lysogenic infection cycle The pattern of phage infection that involves integration of<br />

the phage <strong>DNA</strong> into the host chromosome.<br />

Lysozyme <strong>An</strong> enzyme that weakens the cell walls of certain types of bacteria.<br />

Lytic infection cycle The pattern of infection displayed by a phage that replicates <strong>and</strong><br />

lyses the host cell immediately after the initial infection. Integration of the phage<br />

<strong>DNA</strong> molecule into the bacterial chromosome does not occur.<br />

M13 A bacteriophage that infects E. coli, derivatives of which are used as cloning vectors.<br />

Mapping reagent A collection of <strong>DNA</strong> fragments spanning a chromosome or the entire<br />

genome <strong>and</strong> used in STS mapping.<br />

Massively parallel A high throughput sequencing strategy in which many individual<br />

sequences are generated in parallel.<br />

Mass spectrometry <strong>An</strong> analytical technique in which ions are separated according to<br />

their mass-to-charge ratios.<br />

Matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) A type of mass<br />

spectrometry used in proteomics.<br />

Melting temperature (T m ) The temperature at which a double-str<strong>and</strong>ed <strong>DNA</strong> or<br />

<strong>DNA</strong>–RNA molecule denatures.<br />

Messenger RNA (mRNA) The transcript of a protein-coding gene.<br />

Microarray A set of genes or c<strong>DNA</strong>s immobilized on a glass slide <strong>and</strong> used in transcriptome<br />

studies.<br />

Microinjection A method of introducing new <strong>DNA</strong> into a cell by injecting it directly<br />

into the nucleus.<br />

Microsatellite A polymorphism comprising t<strong>and</strong>em copies of, usually, two-, three-,<br />

four- or five-nucleotide repeat units. Also called a short t<strong>and</strong>em repeat (STR).<br />

Minimal medium A defined medium that provides only the minimum number of different<br />

nutrients needed for growth of a particular bacterium.<br />

Mitochondrial <strong>DNA</strong> The <strong>DNA</strong> molecules present in the mitochondria of eukaryotes.<br />

Mitochondrial Eve The woman who lived in Africa between 140,000 <strong>and</strong> 290,000<br />

years ago <strong>and</strong> who carried the ancestral mitochondrial <strong>DNA</strong> that gave rise to all the<br />

mitochondrial <strong>DNA</strong>s in existence today.<br />

Modification interference assay A technique that uses chemical modification to identify<br />

nucleotides involved in interactions with a <strong>DNA</strong> binding protein.<br />

Molecular clock <strong>An</strong> analysis based on the inferred mutation rate that enables times to<br />

be assigned to the branch points in a gene tree.<br />

Multicopy plasmid A plasmid with a high copy number.<br />

Multigene family A number of identical or related genes present in the same organism,<br />

usually coding for a family of related polypeptides.<br />

Multigene shuffling A directed evolution strategy that involves taking parts of each<br />

member of a multigene family <strong>and</strong> reassembling these parts to create new gene variants.<br />

Multiplex PCR A PCR carried out with more than one pair of primers <strong>and</strong> hence<br />

targeting two or more sites in the <strong>DNA</strong> being studied.<br />

Multiregional evolution A hypothesis that holds that modern humans in the Old World<br />

are descended from Homo erectus populations that left Africa over one million years<br />

ago.<br />

Nick A single-str<strong>and</strong> break, involving the absence of one or more nucleotides, in a<br />

double-str<strong>and</strong>ed <strong>DNA</strong> molecule.

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