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Nucleic Acid Analysis with UV-vis and NMR - Spectroscopy

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32 <strong>Spectroscopy</strong> 24(11) November 2009 www.spectroscopyonline.com<br />

HETP (µm)<br />

60<br />

40<br />

20<br />

0<br />

0 2 4 6 8<br />

Flow Rate (mL/min)<br />

liquid chromatography (HPLC) flow<br />

rate for achieving the best separation<br />

can vary from 0.7 mL/min to 2 mL/<br />

min, as shown in the Van Deemter<br />

plot in Figure 3. In this figure, the<br />

HETP label on the y-axis refers to the<br />

height equivalent to a theoretical plate<br />

— the lower the HETP, the better<br />

the separation. As shown in the Van<br />

Deemter plot, the best separations are<br />

achieved <strong>with</strong> 3-µm packings <strong>and</strong> a<br />

flow rate of 1.5–2 mL/min. ICP-MS<br />

can h<strong>and</strong>le 1.5-mL/min sample introduction<br />

rates <strong>with</strong>out a problem, so<br />

the best separations are achieved <strong>with</strong><br />

a 3-µm packing <strong>and</strong> an LC flow rate<br />

of 1.5 mL/min. These conditions are<br />

well suited for st<strong>and</strong>ard-bore<br />

columns.<br />

If a 3-µm packing is used in a narrow-bore<br />

column, a flow rate of 1.5<br />

mL/min will result in a very high back<br />

pressure, typically too high to be run<br />

safely. This is the result of the smaller<br />

internal diameter of the column. As a<br />

result, narrow-bore columns usually<br />

are run <strong>with</strong> LC flow rates of 0.2–0.5<br />

mL/min. As seen in the Van Deemter<br />

plot, these low flow rates do not provide<br />

the best separation, which means<br />

that using a narrow-bore column may<br />

involve sacrificing some separation<br />

capability. This compromise may<br />

or may not be a problem, depending<br />

upon the spacing between peaks.<br />

However, this usually can be<br />

10m<br />

5m<br />

3m<br />

Figure 3: Van Deemter plots for various LC stationary phase particle diameters.<br />

compensated for by changing the<br />

mobile phase conditions.<br />

Narrow-bore columns offer two advantages<br />

compared <strong>with</strong> st<strong>and</strong>ard-bore<br />

columns: sharper peaks <strong>and</strong> less reagent<br />

consumption. The sharper peaks<br />

are a direct result of the narrower column<br />

width — there is less radial dispersion,<br />

which leads to sharper, more<br />

intense peaks than those obtained<br />

using st<strong>and</strong>ard-bore columns. The increased<br />

peak sharpness may compensate<br />

for the loss of resolution resulting<br />

from the nonoptimal flow rates. The<br />

increased peak height may also mean<br />

that lower levels of the species can be<br />

seen.<br />

A main drawback of narrow-bore<br />

columns versus st<strong>and</strong>ard-bore columns<br />

is that their capacity is reduced.<br />

Because fewer stationary phase particles<br />

can physically fit into the narrower<br />

column, there is less surface area available<br />

for species to bind. As a result,<br />

these columns can become overloaded<br />

easily, which could be a problem when<br />

analyzing unknowns.<br />

Typically, this reduced capacity<br />

is compensated for by diluting the<br />

samples more or using smaller injection<br />

volumes. Because less sample is<br />

injected onto the column, this may<br />

offset the advantage of increased peak<br />

height. Therefore, it is not always possible<br />

to measure lower levels <strong>with</strong> a<br />

narrow-bore column.<br />

Another potential disadvantage of<br />

narrow-bore versus st<strong>and</strong>ard-bore columns<br />

is sample throughput. Because<br />

lower LC flow rates are used for narrow-bore<br />

columns, separations tend to<br />

take longer than <strong>with</strong> st<strong>and</strong>ard-bore<br />

columns, which will affect sample<br />

throughput. The advantage of a lower<br />

LC flow rate is that there is less consumption<br />

of reagents <strong>and</strong> less waste to<br />

dispose.<br />

When deciding whether to use a<br />

st<strong>and</strong>ard-bore or narrow-bore column,<br />

users must consider which combination<br />

of factors is best for a particular<br />

laboratory <strong>and</strong> application. There is no<br />

single correct answer — each situation<br />

is different.<br />

HPLC Versus UHPLC for<br />

Speciation<br />

Within the past several years, a new<br />

form of LC has emerged: ultrahighpressure<br />

liquid chromatography<br />

(UHPLC). The Van Deemter plot<br />

shows that the smaller the particle size<br />

in the column, the better the separation.<br />

UHPLC uses columns <strong>with</strong><br />

particle sizes less than 3 µm, typically<br />

1.5–2.5 µm. These smaller particles<br />

provide more surface area for mobile<br />

phase <strong>and</strong> species to interact, which<br />

leads to better separation. Or, another<br />

way to think of it is that shorter<br />

columns <strong>with</strong> smaller packings can<br />

provide the same separation as longer<br />

columns <strong>with</strong> larger packings. The advantage<br />

of the shorter columns is that<br />

the time for separations are reduced<br />

greatly.<br />

The other signifcance of the smaller<br />

packings is a much higher back pressure,<br />

typically more than 10,000 psi.<br />

This increased pressure requires a special<br />

HPLC pump capable of h<strong>and</strong>ling<br />

it. Normal HPLC pumps cannot be<br />

used <strong>with</strong> columns containing packing<br />

material <strong>with</strong> a diameter of

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