presentation, part 1 - Molecular Evolution

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Extinct &Extant lemursform a cladeThe aye-ayeremains as thebasal lineageKaranth et al., 2005; PNAS
Extinct &Extant lemursform a cladeAnd remember, we’re onlytalking about something onthe order of 400 bp ofmtDNA here!The aye-ayeremains as thebasal lineageKaranth et al., 2005; PNAS
Page 1 and 2: How to Study an Island (Madagascar)
Page 3 and 4: Using Tree Thinking to Reconstructt
Page 5 and 6: Rush hour traffic in Madagascar
Page 8 and 9: Imbalance & Endemism in !Madagascar
Page 11 and 12: Dr. Chris Scotese (Arizona State)Th
Page 13 and 14: Vicariance?(“paleo-endemics”)Di
Page 15 and 16: (i.e., the end of the“age of dino
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Page 19 and 20: Has central plateau served as a bar
Page 21: 1! 2! 3!10 mya (+1.8)1! 2! 3!9.2 my
Page 24: Human Impact:- Humans arrived in Ma
Page 27 and 28: So what are we going to doabout it?
Page 29 and 30: Rodents
Page 31 and 32: LEMURS!!LEMURS!!
Page 33 and 34: Photo by David Haring
Page 35 and 36: Photo by Franz Lanting
Page 37 and 38: Photo by me
Page 39 and 40: Photo by David Haring
Page 41 and 42: Ascending Pharyngeal Artery!
Page 43 and 44: Genetic Consensus of Strepsirrhine
Page 45 and 46: Archaeoindris!Mouse lemur!
Page 47: Office!Main lab!Thermocycler!Gel el
Page 51: Megaladapis cytochrome b sequences
Page 57 and 58: Single dispersal:lemurs (Yoder et a
Page 59 and 60: “Hard” polytomy versus “Soft
Page 61 and 62: Lineage SortingComplete Lineage Sor
Page 63 and 64: Developing New Lemur-Specific Loci
Page 65 and 66: 22 out of 25 nodeshave bootstrapsup
Page 67 and 68: “Ignoring temporal information ob
Page 69 and 70: What is the Molecular Clock Hypothe
Page 71 and 72: Raw Genetic Differences"Species 1:
Page 73 and 74: The Molecular ClockThe Present0.10s
Page 75 and 76: The Molecular ClockThe Present0.022
Page 77 and 78: T3C2C1T2T1Rate and Time are confoun
Page 79 and 80: General Time Reversible (6-paramete
Page 81 and 82: Monkey! Human!Whale! Hippo!TimeUsin
Page 83 and 84: We need a method that …!• allow
Page 85 and 86: Major Innovation …• Both method
Page 87 and 88: Parameter Estimates by Data Partiti
Page 90 and 91: Figure 1 Middle Eocene lorisiforms
Page 93 and 94: N8N9N10C3N1N3N4N5N6N7N11C2N2C8C1C7C
Page 95 and 96: Excellent data quality; very good t
Page 97 and 98: Poor data quality; good taxon sampl
Page 99 and 100: Table 4 Posterior means and 95% cre
Page 101 and 102: Lessons learned (a few):• Multipl
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Bayesian analysis of new data set,
Page 105 and 106:
At precisely 65 mya, an asteroid ne
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David A. Kring and Daniel D. Durda,
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Hypothetical IslandChain between Af
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Malagasy!lemuriforms!AMalagasy!carn
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The Davie Ridge: Possible Sub-aeria
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Cenozoic!Crown-basedSouthern RouteS
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SWEEPSTAKES!
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Reconstructed Indian Ocean currents
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Current Data (presence/absence;mole
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